>emb|Z26322.1|HVALAAT H.vulgare mRNA for alanine aminotransferase
          Length = 1701

 Score =  105 bits (53), Expect = 3e-20
 Identities = 53/53 (100%)
 Strand = Plus / Minus

                                                                 
Query: 37   taaggatgacatggctttgctttattttgtctcatctagaggaggatgctgtc 89
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1692 taaggatgacatggctttgctttattttgtctcatctagaggaggatgctgtc 1640

>gb|AC159260.3| Mus musculus BAC clone RP24-85M18 from chromosome 3, complete sequence
          Length = 208348

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    tttgctttattttgtctcat 71
             ||||||||||||||||||||
Sbjct: 24039 tttgctttattttgtctcat 24058

>gb|AC131757.3| Mus musculus BAC clone RP24-210I7 from chromosome 3, complete sequence
          Length = 161869

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    tttgctttattttgtctcat 71
             ||||||||||||||||||||
Sbjct: 64251 tttgctttattttgtctcat 64232

>gb|AC091155.5| Homo sapiens chromosome 17, clone CTD1-2306D4, complete sequence
          Length = 144430

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     tttgctttattttgtctcat 71
              ||||||||||||||||||||
Sbjct: 125078 tttgctttattttgtctcat 125059

>gb|AC096718.3| Homo sapiens BAC clone RP11-10P19 from 4, complete sequence
          Length = 166745

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     tttattttgtctcatctaga 76
              ||||||||||||||||||||
Sbjct: 136562 tttattttgtctcatctaga 136581

>gb|AC006560.8| Homo sapiens 12 BAC RPCI11-792F18 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 202478

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     cacacacacaataaggatga 45
              ||||||||||||||||||||
Sbjct: 187447 cacacacacaataaggatga 187428

>gb|AC007539.8| Homo sapiens 12 BAC RCPI11-935C2 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177147

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    cacacacacaataaggatga 45
             ||||||||||||||||||||
Sbjct: 62375 cacacacacaataaggatga 62356

>gb|AC009837.13| Homo sapiens chromosome 17, clone RP11-550K23, complete sequence
          Length = 168509

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    tttgctttattttgtctcat 71
             ||||||||||||||||||||
Sbjct: 81133 tttgctttattttgtctcat 81152

>gb|AC115835.6| Mus musculus chromosome 3, clone RP24-184C18, complete sequence
          Length = 172025

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    catggctttgctttattttg 65
             ||||||||||||||||||||
Sbjct: 23050 catggctttgctttattttg 23069

>gb|AC122309.5| Mus musculus BAC clone RP23-293G2 from chromosome 14, complete sequence
          Length = 208443

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 57     tttattttgtctcatctag 75
              |||||||||||||||||||
Sbjct: 113465 tttattttgtctcatctag 113447

>gb|AC146045.3| Pan troglodytes BAC clone RP43-14B22 from 7, complete sequence
          Length = 151553

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    aggatgacatggctttgct 57
             |||||||||||||||||||
Sbjct: 50748 aggatgacatggctttgct 50730

>gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosome 8, complete
            sequence
          Length = 208404

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 71   tctagaggaggatgctgtc 89
            |||||||||||||||||||
Sbjct: 7847 tctagaggaggatgctgtc 7865

>emb|Z73423.1|CEC03A3 Caenorhabditis elegans Cosmid C03A3, complete sequence
          Length = 40285

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 57   tttattttgtctcatctag 75
            |||||||||||||||||||
Sbjct: 3994 tttattttgtctcatctag 3976

>gb|AC124477.4| Mus musculus BAC clone RP24-103A12 from chromosome 9, complete sequence
          Length = 151238

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 52    tttgctttattttgtctca 70
             |||||||||||||||||||
Sbjct: 31248 tttgctttattttgtctca 31266

>emb|AL592047.10| Human DNA sequence from clone RP11-506C15 on chromosome 9 Contains a
             NADH dehydrogenase 2 (MTND2) pseudogene, complete sequence
          Length = 153369

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    aggatgacatggctttgct 57
             |||||||||||||||||||
Sbjct: 14001 aggatgacatggctttgct 14019

>emb|AL139141.23| Human DNA sequence from clone RP5-1180C10 on chromosome 1q24.1-24.3
             Contains the LHX4 gene for LIM homeobox 4, a novel gene
             (FLJ38931), the 3' end of the ACBD6 gene for acyl-Coenzyme
             A binding domain containing 6 and a CpG island, complete
             sequence
          Length = 113808

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    tgccacacacacaataagg 41
             |||||||||||||||||||
Sbjct: 56113 tgccacacacacaataagg 56095

>gb|AC132058.5| Rattus norvegicus 18 BAC CH230-229M9 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 228492

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     tggctttgctttattttgt 66
              |||||||||||||||||||
Sbjct: 116385 tggctttgctttattttgt 116403

>emb|AL645910.8| Mouse DNA sequence from clone RP23-173M6 on chromosome 11 Contains
            the 5' end of a novel gene, the Mtmr3 gene for
            myotubularin related protein 3 and a
            glyceraldehyde-3-phosphate dehydrogenase (Gapd)
            pseudogene, complete sequence
          Length = 204413

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 48   tggctttgctttattttgt 66
            |||||||||||||||||||
Sbjct: 9006 tggctttgctttattttgt 9024

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 51      ctttgctttattttgtctc 69
               |||||||||||||||||||
Sbjct: 4126192 ctttgctttattttgtctc 4126174

>gb|AC151713.4| Mus musculus BAC clone RP24-100K9 from chromosome 8, complete sequence
          Length = 199295

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 71    tctagaggaggatgctgtc 89
             |||||||||||||||||||
Sbjct: 12360 tctagaggaggatgctgtc 12342

>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    ctttgctttattttgtctc 69
             |||||||||||||||||||
Sbjct: 92935 ctttgctttattttgtctc 92917

>gb|AC003668.2| Homo sapiens X PAC RP1-233D13 (Roswell Park Cancer Institute Human PAC
             Library ) complete sequence
          Length = 145859

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    aggatgacatggctttgct 57
             |||||||||||||||||||
Sbjct: 88739 aggatgacatggctttgct 88757

>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0406H10
          Length = 156419

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    ctttgctttattttgtctc 69
             |||||||||||||||||||
Sbjct: 73163 ctttgctttattttgtctc 73145

>gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2552H2 containing neurexin III
             gene, partial cds, complete sequence
          Length = 188078

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 49    ggctttgctttattttgtc 67
             |||||||||||||||||||
Sbjct: 97911 ggctttgctttattttgtc 97893

>gb|AC003014.1|AC003014 Human PAC clone RP1-290B4 from Xq23, complete sequence
          Length = 76169

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 58   ttattttgtctcatctaga 76
            |||||||||||||||||||
Sbjct: 1161 ttattttgtctcatctaga 1179

>gb|AF168777.1|AF168777 Eucalyptus globulus caffeic acid O-methyltransferase (COMT2) gene,
            partial cds
          Length = 3022

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   ctttgctttattttgtctc 69
            |||||||||||||||||||
Sbjct: 2730 ctttgctttattttgtctc 2748

>gb|AC105327.13| Mus musculus chromosome 8, clone RP24-323I19, complete sequence
          Length = 215363

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 71    tctagaggaggatgctgtc 89
             |||||||||||||||||||
Sbjct: 93767 tctagaggaggatgctgtc 93785

>emb|BX005347.5| Zebrafish DNA sequence from clone DKEY-199K9 in linkage group 17,
              complete sequence
          Length = 165991

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     tttgctttattttgtctca 70
              |||||||||||||||||||
Sbjct: 110203 tttgctttattttgtctca 110185

>gb|AY865854.1| Lagothrix lagotricha microRNA mir-125b-1 gene, complete sequence
          Length = 655

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 52  tttgctttattttgtctca 70
           |||||||||||||||||||
Sbjct: 384 tttgctttattttgtctca 402

>gb|AY865848.1| Ateles geoffroyi microRNA mir-125b-1 gene, complete sequence
          Length = 603

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 52  tttgctttattttgtctca 70
           |||||||||||||||||||
Sbjct: 375 tttgctttattttgtctca 393


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,521,169
Number of Sequences: 3902068
Number of extensions: 1521169
Number of successful extensions: 100015
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99937
Number of HSP's gapped (non-prelim): 78
length of query: 116
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 95
effective length of database: 17,151,101,840
effective search space: 1629354674800
effective search space used: 1629354674800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)