| Clone Name | rbags25h01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 95.6 bits (48), Expect = 1e-16 Identities = 139/170 (81%) Strand = Plus / Minus Query: 335 cggccatggcgcgctcggcgcggaggatgggctcgtagtagtcggggaacttgtccatgc 394 ||||||||||||||||||||| ||||||||| | |||||| |||| | ||||||| Sbjct: 10750 cggccatggcgcgctcggcgctgaggatggggtggtagtactcggcgtgggcctccatgc 10691 Query: 395 acctgcgcagcgcggaggtggcgtcgtagcagcgctcgacgacgtcgctgccttccgcct 454 || || | ||||||| |||| | |||||||||||||||||||||||| ||| || || Sbjct: 10690 acttgtggagcgcggcggtgacctcgtagcagcgctcgacgacgtcgtcgccggccttct 10631 Query: 455 ccgcctgctccacgcacttctnccaacccacgaactcctncttgcacccg 504 |||| | |||||||||||||| ||| || || ||||||| | |||||||| Sbjct: 10630 ccgcgtcctccacgcacttctcccacccgacaaactcctccctgcacccg 10581
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 95.6 bits (48), Expect = 1e-16 Identities = 139/170 (81%) Strand = Plus / Minus Query: 335 cggccatggcgcgctcggcgcggaggatgggctcgtagtagtcggggaacttgtccatgc 394 ||||||||||||||||||||| ||||||||| | |||||| |||| | ||||||| Sbjct: 24777054 cggccatggcgcgctcggcgctgaggatggggtggtagtactcggcgtgggcctccatgc 24776995 Query: 395 acctgcgcagcgcggaggtggcgtcgtagcagcgctcgacgacgtcgctgccttccgcct 454 || || | ||||||| |||| | |||||||||||||||||||||||| ||| || || Sbjct: 24776994 acttgtggagcgcggcggtgacctcgtagcagcgctcgacgacgtcgtcgccggccttct 24776935 Query: 455 ccgcctgctccacgcacttctnccaacccacgaactcctncttgcacccg 504 |||| | |||||||||||||| ||| || || ||||||| | |||||||| Sbjct: 24776934 ccgcgtcctccacgcacttctcccacccgacaaactcctccctgcacccg 24776885 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 31170693 ggccgccgggggcggcggcg 31170674 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgccgtcgccgc 227 ||||||| ||||| ||||||||||| |||||| Sbjct: 28447039 tcctcctcctcctccgccaccgccgccgccgc 28447070 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ctccttcgccaccgccgtcgccgc 227 ||||| |||||||||||||||||| Sbjct: 12515328 ctcctccgccaccgccgtcgccgc 12515351 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 cctccttctccttcgccaccgccg 220 ||||| |||||||||||||||||| Sbjct: 2827609 cctccctctccttcgccaccgccg 2827632
>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128559 Score = 95.6 bits (48), Expect = 1e-16 Identities = 139/170 (81%) Strand = Plus / Minus Query: 335 cggccatggcgcgctcggcgcggaggatgggctcgtagtagtcggggaacttgtccatgc 394 ||||||||||||||||||||| ||||||||| | |||||| |||| | ||||||| Sbjct: 62466 cggccatggcgcgctcggcgctgaggatggggtggtagtactcggcgtgggcctccatgc 62407 Query: 395 acctgcgcagcgcggaggtggcgtcgtagcagcgctcgacgacgtcgctgccttccgcct 454 || || | ||||||| |||| | |||||||||||||||||||||||| ||| || || Sbjct: 62406 acttgtggagcgcggcggtgacctcgtagcagcgctcgacgacgtcgtcgccggccttct 62347 Query: 455 ccgcctgctccacgcacttctnccaacccacgaactcctncttgcacccg 504 |||| | |||||||||||||| ||| || || ||||||| | |||||||| Sbjct: 62346 ccgcgtcctccacgcacttctcccacccgacaaactcctccctgcacccg 62297
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 95.6 bits (48), Expect = 1e-16 Identities = 139/170 (81%) Strand = Plus / Minus Query: 335 cggccatggcgcgctcggcgcggaggatgggctcgtagtagtcggggaacttgtccatgc 394 ||||||||||||||||||||| ||||||||| | |||||| |||| | ||||||| Sbjct: 24866838 cggccatggcgcgctcggcgctgaggatggggtggtagtactcggcgtgggcctccatgc 24866779 Query: 395 acctgcgcagcgcggaggtggcgtcgtagcagcgctcgacgacgtcgctgccttccgcct 454 || || | ||||||| |||| | |||||||||||||||||||||||| ||| || || Sbjct: 24866778 acttgtggagcgcggcggtgacctcgtagcagcgctcgacgacgtcgtcgccggccttct 24866719 Query: 455 ccgcctgctccacgcacttctnccaacccacgaactcctncttgcacccg 504 |||| | |||||||||||||| ||| || || ||||||| | |||||||| Sbjct: 24866718 ccgcgtcctccacgcacttctcccacccgacaaactcctccctgcacccg 24866669 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 31261216 ggccgccgggggcggcggcg 31261197 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgccgtcgccgc 227 ||||||| ||||| ||||||||||| |||||| Sbjct: 28538363 tcctcctcctcctccgccaccgccgccgccgc 28538394 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ctccttcgccaccgccgtcgccgc 227 ||||| |||||||||||||||||| Sbjct: 12512091 ctcctccgccaccgccgtcgccgc 12512114 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 cctccttctccttcgccaccgccg 220 ||||| |||||||||||||||||| Sbjct: 2827720 cctccctctccttcgccaccgccg 2827743
>dbj|AK073665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051B07, full insert sequence Length = 882 Score = 95.6 bits (48), Expect = 1e-16 Identities = 139/170 (81%) Strand = Plus / Minus Query: 335 cggccatggcgcgctcggcgcggaggatgggctcgtagtagtcggggaacttgtccatgc 394 ||||||||||||||||||||| ||||||||| | |||||| |||| | ||||||| Sbjct: 457 cggccatggcgcgctcggcgctgaggatggggtggtagtactcggcgtgggcctccatgc 398 Query: 395 acctgcgcagcgcggaggtggcgtcgtagcagcgctcgacgacgtcgctgccttccgcct 454 || || | ||||||| |||| | |||||||||||||||||||||||| ||| || || Sbjct: 397 acttgtggagcgcggcggtgacctcgtagcagcgctcgacgacgtcgtcgccggccttct 338 Query: 455 ccgcctgctccacgcacttctnccaacccacgaactcctncttgcacccg 504 |||| | |||||||||||||| ||| || || ||||||| | |||||||| Sbjct: 337 ccgcgtcctccacgcacttctcccacccgacaaactcctccctgcacccg 288
>ref|NM_192625.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1506 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 255 ttcctcctcggccgccgggggcggcggcgagg 286 ||||||||| ||||||||||||||||||||| Sbjct: 84 ttcctcctcatccgccgggggcggcggcgagg 115
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 255 ttcctcctcggccgccgggggcggcggcgagg 286 ||||||||| ||||||||||||||||||||| Sbjct: 23356826 ttcctcctcatccgccgggggcggcggcgagg 23356857 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 338 ccatggcgcgctcggcgcggag 359 |||||||||||||||||||||| Sbjct: 5699684 ccatggcgcgctcggcgcggag 5699705 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ggcgcgctcggcgcggagga 361 |||||||||||||||||||| Sbjct: 40966781 ggcgcgctcggcgcggagga 40966800 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 25555787 ggccgccgggggcggcggcg 25555768 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgccgtcgccgc 227 ||||||| ||||| |||| ||||||||||||| Sbjct: 6222872 tcctcctcctcctacgccgccgccgtcgccgc 6222903
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 255 ttcctcctcggccgccgggggcggcggcgagg 286 ||||||||| ||||||||||||||||||||| Sbjct: 82524 ttcctcctcatccgccgggggcggcggcgagg 82555
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 255 ttcctcctcggccgccgggggcggcggcgagg 286 ||||||||| ||||||||||||||||||||| Sbjct: 143568 ttcctcctcatccgccgggggcggcggcgagg 143599
>gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, complete sequence Length = 162554 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgccgtc 222 ||||||||||||| ||||||||||||| Sbjct: 147322 tcctccttctcctccgccaccgccgtc 147348
>ref|NM_188324.1| Oryza sativa (japonica cultivar-group), Ozsa8075 predicted mRNA Length = 1563 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 338 ccatggcgcgctcggcgcggag 359 |||||||||||||||||||||| Sbjct: 742 ccatggcgcgctcggcgcggag 721
>ref|XM_465168.1| Oryza sativa (japonica cultivar-group), mRNA Length = 381 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 gggggcggcggcgaggcagggg 292 |||||||||||||||||||||| Sbjct: 186 gggggcggcggcgaggcagggg 207
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 335 cggccatggcgcgctcggcgcg 356 |||||||||||||||||||||| Sbjct: 1837705 cggccatggcgcgctcggcgcg 1837684
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 gccttgaaggcctcgatatcctcggc 338 |||||| ||||||||||||||||||| Sbjct: 3106599 gccttggaggcctcgatatcctcggc 3106624
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 gccttgaaggcctcgatatcctcggc 338 |||||| ||||||||||||||||||| Sbjct: 82851 gccttggaggcctcgatatcctcggc 82876
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 gggggcggcggcgaggcagggg 292 |||||||||||||||||||||| Sbjct: 12050220 gggggcggcggcgaggcagggg 12050199 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcgaggc 287 ||||||||| |||||||||||||| Sbjct: 28885146 ggccgccggcggcggcggcgaggc 28885123 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cttcgccaccgccgtcgccg 226 |||||||||||||||||||| Sbjct: 28411358 cttcgccaccgccgtcgccg 28411339 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 cgtcgctgccttccgcctcc 456 |||||||||||||||||||| Sbjct: 12752936 cgtcgctgccttccgcctcc 12752917 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 cggccgccgggggcggcggcgagg 286 |||||||||| ||||||||||||| Sbjct: 10896902 cggccgccggcggcggcggcgagg 10896879
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 338 ccatggcgcgctcggcgcggag 359 |||||||||||||||||||||| Sbjct: 24386 ccatggcgcgctcggcgcggag 24407
>dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0543C11 Length = 159075 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 gggggcggcggcgaggcagggg 292 |||||||||||||||||||||| Sbjct: 147498 gggggcggcggcgaggcagggg 147477
>dbj|AK101527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033047A10, full insert sequence Length = 1822 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 338 ccatggcgcgctcggcgcggag 359 |||||||||||||||||||||| Sbjct: 790 ccatggcgcgctcggcgcggag 769
>dbj|AK100265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064J20, full insert sequence Length = 2211 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 338 ccatggcgcgctcggcgcggag 359 |||||||||||||||||||||| Sbjct: 1179 ccatggcgcgctcggcgcggag 1158
>ref|NM_197857.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0003O19.24), mRNA Length = 2136 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcga 284 ||||||||||||||||||||| Sbjct: 1183 ggccgccgggggcggcggcga 1163
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 tctccttcgccaccgccgtcg 223 ||||||||||||||||||||| Sbjct: 62801 tctccttcgccaccgccgtcg 62781
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcga 284 ||||||||||||||||||||| Sbjct: 57425 ggccgccgggggcggcggcga 57445
>ref|XM_783401.1| PREDICTED: Strongylocentrotus purpuratus similar to CG11276-PA, isoform A (LOC583495), partial mRNA Length = 285 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 124 tccacatcaaggatgcctcaaatctcacc 152 |||||||||||||||||||| ||| |||| Sbjct: 125 tccacatcaaggatgcctcagatcacacc 153
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 cttccgcctccgcctgctcca 466 ||||||||||||||||||||| Sbjct: 108763 cttccgcctccgcctgctcca 108743
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 tctccttcgccaccgccgtcg 223 ||||||||||||||||||||| Sbjct: 4411438 tctccttcgccaccgccgtcg 4411418 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 256 tcctcctcggccgccgggggcggcggcgaggc 287 |||||| | ||||||| ||||||||||||||| Sbjct: 7028789 tcctccgccgccgccgcgggcggcggcgaggc 7028820
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcga 284 ||||||||||||||||||||| Sbjct: 22263713 ggccgccgggggcggcggcga 22263733 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gggggcggcggcgaggcaggg 291 ||||||||||||||||||||| Sbjct: 14192784 gggggcggcggcgaggcaggg 14192804 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tcggccgccgggggcggcgg 281 |||||||||||||||||||| Sbjct: 4306405 tcggccgccgggggcggcgg 4306386
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gcggcggcgaggcaggggagg 295 ||||||||||||||||||||| Sbjct: 1773826 gcggcggcgaggcaggggagg 1773846
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcga 284 ||||||||||||||||||||| Sbjct: 80956 ggccgccgggggcggcggcga 80976
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 tcctcctcggccgccgggggcggcg 280 ||||||||||||||||| ||||||| Sbjct: 184651 tcctcctcggccgccggtggcggcg 184675
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gggggcggcggcgaggcaggg 291 ||||||||||||||||||||| Sbjct: 64857 gggggcggcggcgaggcaggg 64877
>dbj|AP006062.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0415D04 Length = 176627 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gcggcggcgaggcaggggagg 295 ||||||||||||||||||||| Sbjct: 160398 gcggcggcgaggcaggggagg 160418
>dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1227_D07 Length = 118358 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gcggcggcgaggcaggggagg 295 ||||||||||||||||||||| Sbjct: 12488 gcggcggcgaggcaggggagg 12508
>dbj|AK101216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B21, full insert sequence Length = 2004 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcga 284 ||||||||||||||||||||| Sbjct: 666 ggccgccgggggcggcggcga 646
>dbj|AK060642.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F06, full insert sequence Length = 1620 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcga 284 ||||||||||||||||||||| Sbjct: 655 ggccgccgggggcggcggcga 635
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcga 284 ||||||||||||||||||||| Sbjct: 22275781 ggccgccgggggcggcggcga 22275801 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gggggcggcggcgaggcaggg 291 ||||||||||||||||||||| Sbjct: 14201026 gggggcggcggcgaggcaggg 14201046 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tcggccgccgggggcggcgg 281 |||||||||||||||||||| Sbjct: 4307226 tcggccgccgggggcggcgg 4307207
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 tctccttcgccaccgccgtcg 223 ||||||||||||||||||||| Sbjct: 4420132 tctccttcgccaccgccgtcg 4420112 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 256 tcctcctcggccgccgggggcggcggcgaggc 287 |||||| | ||||||| ||||||||||||||| Sbjct: 7095256 tcctccgccgccgccgcgggcggcggcgaggc 7095287
>emb|AL844195.12| Mouse DNA sequence from clone RP23-144K11 on chromosome X, complete sequence Length = 180916 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aaggtaaaacaaaataatcca 127 ||||||||||||||||||||| Sbjct: 41469 aaggtaaaacaaaataatcca 41489
>gb|AY831391.1| Oryza sativa (indica cultivar-group) BTH-induced protein phosphatase 2C 2 K3 form (BIPP2C2) mRNA, complete cds, alternatively spliced Length = 1326 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 72 ggccgccgggggcggcggcg 91
>gb|AY831390.1| Oryza sativa (indica cultivar-group) BTH-induced protein phosphatase 2C 2 K2 form (BIPP2C2) mRNA, complete cds, alternatively spliced Length = 1526 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 71 ggccgccgggggcggcggcg 90
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 tcgatatcctcggccatggcgcgc 348 |||||||||||||| ||||||||| Sbjct: 1954494 tcgatatcctcggcgatggcgcgc 1954517
>ref|NM_123613.3| Arabidopsis thaliana ARC6 (ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6); heat shock protein binding / unfolded protein binding AT5G42480 (ARC6) mRNA, complete cds Length = 2627 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgcc 219 ||||||| |||||||||||||||| Sbjct: 282 tcctcctcctccttcgccaccgcc 305
>ref|NM_188429.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1896 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 196 tcctccttctccttcgccaccgccgtcgccgc 227 ||||||| ||||| |||| ||||||||||||| Sbjct: 177 tcctcctcctcctacgccgccgccgtcgccgc 146
>ref|NM_195033.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNAb0015J03.11), mRNA Length = 2187 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tcggccgccgggggcggcgg 281 |||||||||||||||||||| Sbjct: 56 tcggccgccgggggcggcgg 37
>ref|XM_469858.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1641 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 142 ggccgccgggggcggcggcg 161
>ref|XM_467326.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1523 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcgaggc 287 ||||||||| |||||||||||||| Sbjct: 248 ggccgccggcggcggcggcgaggc 271
>ref|XM_467243.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1566 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cttcgccaccgccgtcgccg 226 |||||||||||||||||||| Sbjct: 1183 cttcgccaccgccgtcgccg 1164
>ref|XM_465009.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1002 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 cggccgccgggggcggcggcgagg 286 |||||||||| ||||||||||||| Sbjct: 563 cggccgccggcggcggcggcgagg 586
>ref|NM_190041.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1077 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ggcgcgctcggcgcggagga 361 |||||||||||||||||||| Sbjct: 243 ggcgcgctcggcgcggagga 224
>ref|XM_469515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 196 tcctccttctccttcgccaccgccgtcgccgc 227 ||||||| ||||| ||||||||||| |||||| Sbjct: 122 tcctcctcctcctccgccaccgccgccgccgc 91
>ref|XM_515533.1| PREDICTED: Pan troglodytes adducin 2 (LOC459305), mRNA Length = 6774 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 3843 cgggggcggcggcgaggcag 3824
>ref|NM_187321.1| Oryza sativa (japonica cultivar-group), mRNA Length = 534 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ccccggaggcttcgctggcc 315 |||||||||||||||||||| Sbjct: 100 ccccggaggcttcgctggcc 119
>gb|AY022927.1| Oryza sativa microsatellite MRG5252 containing (CTC)X8, closest to marker R1770, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgccgtcgccgc 227 ||||||| ||||| ||||||||||| |||||| Sbjct: 111 tcctcctcctcctccgccaccgccgccgccgc 142
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 256 tcctcctcggccgccgggggcggcggcgaggc 287 |||||| | ||||||| ||||||||||||||| Sbjct: 154047 tcctccgccgccgccgcgggcggcggcgaggc 154078
>ref|NM_017482.2| Homo sapiens adducin 2 (beta) (ADD2), transcript variant beta-2, mRNA Length = 3795 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 510 cgggggcggcggcgaggcag 491
>ref|NM_017488.2| Homo sapiens adducin 2 (beta) (ADD2), transcript variant beta-4, mRNA Length = 4043 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 510 cgggggcggcggcgaggcag 491
>ref|NM_017483.2| Homo sapiens adducin 2 (beta) (ADD2), transcript variant beta-3a, mRNA Length = 3039 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 510 cgggggcggcggcgaggcag 491
>ref|NM_017484.2| Homo sapiens adducin 2 (beta) (ADD2), transcript variant beta-3b, mRNA Length = 2877 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 510 cgggggcggcggcgaggcag 491
>ref|NM_001617.2| Homo sapiens adducin 2 (beta) (ADD2), transcript variant beta-1, mRNA Length = 3957 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 510 cgggggcggcggcgaggcag 491
>gb|BC065525.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone MGC:74968 IMAGE:6142886), complete cds Length = 3777 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 310 cgggggcggcggcgaggcag 291
>gb|BC051882.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone IMAGE:6142945), partial cds Length = 2561 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 483 cgggggcggcggcgaggcag 464
>gb|BC011416.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone IMAGE:3875231), with apparent retained intron Length = 2226 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 146 cgggggcggcggcgaggcag 127
>gb|AC098706.3| Mus musculus BAC clone RP23-1I11 from 14, complete sequence Length = 234326 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 gcatctgcctgcttcttact 245 |||||||||||||||||||| Sbjct: 23087 gcatctgcctgcttcttact 23106
>gb|BC056881.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone IMAGE:6139987), partial cds Length = 2417 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 339 cgggggcggcggcgaggcag 320
>gb|BC027876.1| Homo sapiens cDNA clone IMAGE:5207443, containing frame-shift errors Length = 3778 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 494 cgggggcggcggcgaggcag 475
>emb|AL359878.13| Human DNA sequence from clone RP11-363N22 on chromosome 10 Contains the 5' end of gene KIAA0217, a novel gene, the 5' end of the gene for G protein-binding protein CRFG (NGB FLJ10686 FLJ10690 FLJ39774) and four CpG islands, complete sequence Length = 184289 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 caagatcctccttctccttc 210 |||||||||||||||||||| Sbjct: 182467 caagatcctccttctccttc 182448
>gb|AY221469.1| Arabidopsis thaliana division protein (ARC6) mRNA, complete cds; nuclear gene for chloroplast product Length = 2438 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgcc 219 ||||||| |||||||||||||||| Sbjct: 170 tcctcctcctccttcgccaccgcc 193
>gb|AY221468.1| Arabidopsis thaliana division protein (ARC6) gene, complete cds; nuclear gene for chloroplast product Length = 3668 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgcc 219 ||||||| |||||||||||||||| Sbjct: 646 tcctcctcctccttcgccaccgcc 669
>gb|AY221467.1| Arabidopsis thaliana truncated division protein (arc6) gene, arc6-1 allele, complete cds; nuclear gene for chloroplast product Length = 3664 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgcc 219 ||||||| |||||||||||||||| Sbjct: 646 tcctcctcctccttcgccaccgcc 669
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03, from chromosome 3, complete sequence Length = 124550 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 ctccttcgccaccgccgtcgccgc 227 ||||| |||||||||||||||||| Sbjct: 72613 ctcctccgccaccgccgtcgccgc 72590
>gb|AF486423.1| Homo sapiens beta adducin 2 transcript variant beta-4d (ADD2) mRNA, partial cds; alternatively spliced Length = 331 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 82 cgggggcggcggcgaggcag 63
>gb|AF486422.1| Homo sapiens beta adducin 2 transcript variant beta-4c (ADD2) mRNA, partial cds; alternatively spliced Length = 880 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 82 cgggggcggcggcgaggcag 63
>gb|AF486421.1| Homo sapiens beta adducin 2 transcript variant beta-4b (ADD2) mRNA, partial cds; alternatively spliced Length = 876 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 82 cgggggcggcggcgaggcag 63
>gb|AF486420.1| Homo sapiens beta adducin 2 transcript variant beta-4a (ADD2) mRNA, partial cds; alternatively spliced Length = 1829 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 113 cgggggcggcggcgaggcag 94
>gb|AY150490.1| Arabidopsis thaliana unknown protein (At5g42480) mRNA, complete cds Length = 2436 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgcc 219 ||||||| |||||||||||||||| Sbjct: 169 tcctcctcctccttcgccaccgcc 192
>gb|AY091075.1| Arabidopsis thaliana unknown protein (At5g42480) mRNA, complete cds Length = 2637 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgcc 219 ||||||| |||||||||||||||| Sbjct: 282 tcctcctcctccttcgccaccgcc 305
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctcggccatggcgcgctc 350 |||||||||||||||||||| Sbjct: 2693224 tcctcggccatggcgcgctc 2693205
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 cggccatggcgcgctcggcg 354 |||||||||||||||||||| Sbjct: 103833 cggccatggcgcgctcggcg 103852
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 cggccatggcgcgctcggcg 354 |||||||||||||||||||| Sbjct: 107814 cggccatggcgcgctcggcg 107833
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cgccgggggcggcggcgagg 286 |||||||||||||||||||| Sbjct: 42470 cgccgggggcggcggcgagg 42451
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcgaggc 287 ||||| |||||||||||||||||| Sbjct: 29516 ggccgacgggggcggcggcgaggc 29539
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tcggccgccgggggcggcgg 281 |||||||||||||||||||| Sbjct: 73946 tcggccgccgggggcggcgg 73927
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ctcggccatggcgcgctcgg 352 |||||||||||||||||||| Sbjct: 2841515 ctcggccatggcgcgctcgg 2841534
>emb|CR860745.1| Pongo pygmaeus mRNA; cDNA DKFZp459M0727 (from clone DKFZp459M0727) Length = 4511 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 95 cgggggcggcggcgaggcag 76
>gb|AC022536.13| Homo sapiens chromosome 10 clone RP11-38M7, complete sequence Length = 160678 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 caagatcctccttctccttc 210 |||||||||||||||||||| Sbjct: 122265 caagatcctccttctccttc 122284
>emb|CR590670.1| full-length cDNA clone CS0DM006YC12 of Fetal liver of Homo sapiens (human) Length = 2414 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 249 cgggggcggcggcgaggcag 230
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 91334 ggccgccgggggcggcggcg 91315
>gb|BC010237.1|BC010237 Homo sapiens, adducin 2 (beta), clone IMAGE:4153471, mRNA Length = 2572 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 490 cgggggcggcggcgaggcag 471
>tpg|BK004859.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) growth-regulating factor 4 (GRF4) gene, complete cds Length = 5890 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcgaggc 287 ||||||||| |||||||||||||| Sbjct: 1847 ggccgccggcggcggcggcgaggc 1870
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcgaggc 287 ||||| |||||||||||||||||| Sbjct: 35325776 ggccgacgggggcggcggcgaggc 35325753 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 cttcgccaccgccgtcgccgcatc 230 ||||| |||||||||||||||||| Sbjct: 22259431 cttcgtcaccgccgtcgccgcatc 22259454
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 agcgctcgacgacgtcgctg 444 |||||||||||||||||||| Sbjct: 26797797 agcgctcgacgacgtcgctg 26797816
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ccccggaggcttcgctggcc 315 |||||||||||||||||||| Sbjct: 17418673 ccccggaggcttcgctggcc 17418654
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 tctccttcgccaccgccgtcgccg 226 |||||||||||| ||||||||||| Sbjct: 2007987 tctccttcgccatcgccgtcgccg 2008010
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgccgtcgccgc 227 ||||||| ||||| ||||||||||| |||||| Sbjct: 41169 tcctcctcctcctccgccaccgccgccgccgc 41200
>emb|BX841670.1|CNS09YJH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS89ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgcc 219 ||||||| |||||||||||||||| Sbjct: 181 tcctcctcctccttcgccaccgcc 204
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ggcgcgctcggcgcggagga 361 |||||||||||||||||||| Sbjct: 3711 ggcgcgctcggcgcggagga 3730
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ggcgcgctcggcgcggagga 361 |||||||||||||||||||| Sbjct: 95206 ggcgcgctcggcgcggagga 95225
>gb|AC007395.3|AC007395 Homo sapiens BAC clone RP11-504O1 from 2, complete sequence Length = 158458 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 12796 cgggggcggcggcgaggcag 12815
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 265 gccgccgggggcggcggcgaggcagggg 292 |||||||| ||||||| ||||||||||| Sbjct: 1763184 gccgccggcggcggcgccgaggcagggg 1763211
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 cctccttctccttcgccaccgccg 220 ||||| |||||||||||||||||| Sbjct: 99565 cctccctctccttcgccaccgccg 99588
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ccccggaggcttcgctggcc 315 |||||||||||||||||||| Sbjct: 86897 ccccggaggcttcgctggcc 86878
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgccgtcgccgc 227 ||||||| ||||| |||| ||||||||||||| Sbjct: 85070 tcctcctcctcctacgccgccgccgtcgccgc 85101
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cttcgccaccgccgtcgccg 226 |||||||||||||||||||| Sbjct: 35479 cttcgccaccgccgtcgccg 35460
>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_E07 Length = 123613 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcgaggc 287 ||||||||| |||||||||||||| Sbjct: 77838 ggccgccggcggcggcggcgaggc 77815
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgtgcagatcacgcccaagg 110 |||||||||||||||||||| Sbjct: 3776605 cgtgcagatcacgcccaagg 3776624
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 2593 ggccgccgggggcggcggcg 2574
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 tctccttcgccaccgccgtcgccg 226 |||||||||||| ||||||||||| Sbjct: 136767 tctccttcgccatcgccgtcgccg 136790
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 83390 ggccgccgggggcggcggcg 83371
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 tctccttcgccaccgccgtcgccg 226 |||||||||||| ||||||||||| Sbjct: 28849 tctccttcgccatcgccgtcgccg 28872
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 cgtcgctgccttccgcctcc 456 |||||||||||||||||||| Sbjct: 101213 cgtcgctgccttccgcctcc 101194
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 cggccgccgggggcggcggcgagg 286 |||||||||| ||||||||||||| Sbjct: 103101 cggccgccggcggcggcggcgagg 103078
>dbj|AB016888.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDH9 Length = 85791 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 tcctccttctccttcgccaccgcc 219 ||||||| |||||||||||||||| Sbjct: 64245 tcctcctcctccttcgccaccgcc 64268
>dbj|AK121945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107G04, full insert sequence Length = 1301 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 tctccttcgccaccgccgtcgccg 226 |||||||||||| ||||||||||| Sbjct: 75 tctccttcgccatcgccgtcgccg 52
>dbj|AK120801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012M12, full insert sequence Length = 1353 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ggcgcgctcggcgcggagga 361 |||||||||||||||||||| Sbjct: 355 ggcgcgctcggcgcggagga 336
>dbj|AK105764.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D12, full insert sequence Length = 1635 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 197 ggccgccgggggcggcggcg 216
>dbj|AK102620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099H11, full insert sequence Length = 1532 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 93 ggccgccgggggcggcggcg 112
>dbj|AK101270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032N04, full insert sequence Length = 3109 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 cctccttctccttcgccaccgccg 220 ||||| |||||||||||||||||| Sbjct: 221 cctccctctccttcgccaccgccg 244
>dbj|AK100995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146J24, full insert sequence Length = 1371 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ggcgcgctcggcgcggagga 361 |||||||||||||||||||| Sbjct: 359 ggcgcgctcggcgcggagga 340
>dbj|AK072896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145C13, full insert sequence Length = 3286 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 tctccttcgccaccgccgtcgccg 226 |||||||||||| ||||||||||| Sbjct: 62 tctccttcgccatcgccgtcgccg 39
>dbj|AK066083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050O18, full insert sequence Length = 1776 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcg 283 |||||||||||||||||||| Sbjct: 156 ggccgccgggggcggcggcg 175
>gb|BC041666.1| Homo sapiens adducin 2 (beta), transcript variant beta-4, mRNA (cDNA clone MGC:47622 IMAGE:5491324), complete cds Length = 2654 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 490 cgggggcggcggcgaggcag 471
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 tcggccgccgggggcggcgg 281 |||||||||||||||||||| Sbjct: 34377 tcggccgccgggggcggcgg 34396
>dbj|AK063983.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-D07, full insert sequence Length = 1523 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 ggccgccgggggcggcggcgaggc 287 ||||||||| |||||||||||||| Sbjct: 248 ggccgccggcggcggcggcgaggc 271
>dbj|AK060695.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D07, full insert sequence Length = 1566 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cttcgccaccgccgtcgccg 226 |||||||||||||||||||| Sbjct: 1183 cttcgccaccgccgtcgccg 1164
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tgaacaattgtataattccc 45 |||||||||||||||||||| Sbjct: 1770165 tgaacaattgtataattccc 1770184
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tccgcctccgcctgctccac 467 |||||||||||||||||||| Sbjct: 3406375 tccgcctccgcctgctccac 3406394
>emb|CT573047.6| Mouse DNA sequence from clone RP23-73L5 on chromosome 14, complete sequence Length = 211944 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 gcatctgcctgcttcttact 245 |||||||||||||||||||| Sbjct: 168155 gcatctgcctgcttcttact 168174
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 agcgctcgacgacgtcgctg 444 |||||||||||||||||||| Sbjct: 26725967 agcgctcgacgacgtcgctg 26725986
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 agcgctcgacgacgtcgctg 444 |||||||||||||||||||| Sbjct: 1764 agcgctcgacgacgtcgctg 1783
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 ggccgccgggggcggcggcgaggc 287 ||||| |||||||||||||||||| Sbjct: 121621 ggccgacgggggcggcggcgaggc 121598
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 cttcgccaccgccgtcgccgcatc 230 ||||| |||||||||||||||||| Sbjct: 10333 cttcgtcaccgccgtcgccgcatc 10356
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 agcgctcgacgacgtcgctg 444 |||||||||||||||||||| Sbjct: 1181 agcgctcgacgacgtcgctg 1162
>dbj|AB209227.1| Homo sapiens mRNA for adducin 2 isoform b variant protein Length = 3776 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 525 cgggggcggcggcgaggcag 506
>emb|X58199.1|HSBADD Human mRNA for beta adducin Length = 2597 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgggggcggcggcgaggcag 289 |||||||||||||||||||| Sbjct: 367 cgggggcggcggcgaggcag 348
>dbj|AB071805.1| Oryza sativa (japonica cultivar-group) mRNA for transcription factor PCF5, complete cds Length = 2442 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 196 tcctccttctccttcgccaccgccgtcgccgc 227 ||||||| ||||| |||| ||||||||||||| Sbjct: 285 tcctcctcctcctacgccgccgccgtcgccgc 254 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,248,081 Number of Sequences: 3902068 Number of extensions: 4248081 Number of successful extensions: 116555 Number of sequences better than 10.0: 135 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112112 Number of HSP's gapped (non-prelim): 4438 length of query: 504 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 482 effective length of database: 17,147,199,772 effective search space: 8264950290104 effective search space used: 8264950290104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)