>RIB1_RAT (P07153) Dolichyl-diphosphooligosaccharide--protein|
           glycosyltransferase 67 kDa subunit precursor (EC
           2.4.1.119) (Ribophorin I) (RPN-I)
          Length = 605

 Score = 96.7 bits (239), Expect = 6e-20
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
 Frame = -1

Query: 661 WHCTFTIGYGMPLQDFLFESADG----RRFANLTFGSPLLNTVVDNLTIKVVLPEGSKSP 494
           W   + +GY +P  ++L+   D      RF +  F       V+D+LT+K++LPEG+K+ 
Sbjct: 324 WKTHYIVGYNLPSYEYLYNLGDQYALKMRFVDHVFDEQ----VIDSLTVKIILPEGAKNI 379

Query: 493 QAVVPFETDQHL-ETSYSYLDVVGRTTVVIKKKNVVGEHNVPFQVYYEFSPIFMLAEPLM 317
           Q   P++  +   E  Y+YLD  GR  +V  KKN+V +H     V+Y F+ + ML EPL+
Sbjct: 380 QVDSPYDISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYTFNKVLMLQEPLL 439

Query: 316 LITAALLFFTACIAYLHMDLSIAKSHAS 233
           ++ A  + F   I Y+ +D SI K  A+
Sbjct: 440 VVAAFYILFFTVIIYVRLDFSITKDPAA 467

>RIB1_MOUSE (Q91YQ5) Dolichyl-diphosphooligosaccharide--protein|
           glycosyltransferase 67 kDa subunit precursor (EC
           2.4.1.119) (Ribophorin I) (RPN-I)
          Length = 608

 Score = 96.7 bits (239), Expect = 6e-20
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
 Frame = -1

Query: 661 WHCTFTIGYGMPLQDFLFESADG----RRFANLTFGSPLLNTVVDNLTIKVVLPEGSKSP 494
           W   + +GY +P  ++L+   D      RF +  F       V+D+LT+K++LPEG+K+ 
Sbjct: 327 WKTHYIVGYNLPSYEYLYNLGDQYALKMRFVDHVFDEQ----VIDSLTVKIILPEGAKNI 382

Query: 493 QAVVPFETDQHL-ETSYSYLDVVGRTTVVIKKKNVVGEHNVPFQVYYEFSPIFMLAEPLM 317
           Q   P++  +   E  Y+YLD  GR  +V  KKN+V +H     V+Y F+ + ML EPL+
Sbjct: 383 QVDSPYDISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYTFNKVLMLQEPLL 442

Query: 316 LITAALLFFTACIAYLHMDLSIAKSHAS 233
           ++ A  + F   I Y+ +D SI K  A+
Sbjct: 443 VVAAFYILFFTVIIYVRLDFSITKDPAA 470

>RIB1_HUMAN (P04843) Dolichyl-diphosphooligosaccharide--protein|
           glycosyltransferase 67 kDa subunit precursor (EC
           2.4.1.119) (Ribophorin I) (RPN-I)
          Length = 607

 Score = 96.3 bits (238), Expect = 7e-20
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
 Frame = -1

Query: 661 WHCTFTIGYGMPLQDFLFESADG----RRFANLTFGSPLLNTVVDNLTIKVVLPEGSKSP 494
           W   + +GY +P  ++L+   D      RF +  F       V+D+LT+K++LPEG+K+ 
Sbjct: 326 WKTHYIVGYNLPSYEYLYNLGDQYALKMRFVDHVFDEQ----VIDSLTVKIILPEGAKNI 381

Query: 493 QAVVPFETDQHL-ETSYSYLDVVGRTTVVIKKKNVVGEHNVPFQVYYEFSPIFMLAEPLM 317
           +   P+E  +   E  Y+YLD  GR  +V  KKN+V +H     V+Y F+ + ML EPL+
Sbjct: 382 EIDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYTFNKVLMLQEPLL 441

Query: 316 LITAALLFFTACIAYLHMDLSIAKSHAS 233
           ++ A  + F   I Y+ +D SI K  A+
Sbjct: 442 VVAAFYILFFTVIIYVRLDFSITKDPAA 469

>OSTA_YEAST (P41543) Dolichyl-diphosphooligosaccharide--protein|
           glycosyltransferase alpha subunit precursor (EC
           2.4.1.119) (Oligosaccharyl transferase alpha subunit)
           (Oligosaccharyl transferase 64 kDa subunit)
          Length = 476

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
 Frame = -1

Query: 661 WHCTFTIGYGMPLQDFLFESA--DGRRFANLTFGSPLLNTVVDNLTIKVVLPEGSK--SP 494
           W+  FT+G+   L DFL  S+  D +  A++   +   +TV DN+ + V LPEG++    
Sbjct: 333 WNYNFTVGWTNKLSDFLHVSSGSDEKFVASIPILNGPPDTVYDNVELSVFLPEGAEIFDI 392

Query: 493 QAVVPFETDQHLETSYSYLDV-VGRTTVVIKKKNVVGE-HNVPFQVYYEFSPIFMLAEPL 320
            + VPF T+  +ET  SY D+  G   +    +N++ +  N    + Y++       +PL
Sbjct: 393 DSPVPF-TNVSIETQKSYFDLNKGHVKLTFSYRNLISQVANGQVLIKYDYPKSSFFKKPL 451

Query: 319 MLITAALLFFTA 284
            +   A   FTA
Sbjct: 452 SI---ACYIFTA 460

>ATP6_STRLI (P50012) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 281

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 3/131 (2%)
 Frame = -1

Query: 655 CTFTIGYGMP---LQDFLFESADGRRFANLTFGSPLLNTVVDNLTIKVVLPEGSKSPQAV 485
           C    G G P   L  FLFE   G   +NL F  P+L  ++ ++ I        + P+ V
Sbjct: 23  CHIFDGCGFPSPGLHSFLFEPLWGDHDSNLYFNKPMLLALLGSIVIVGFFWAAFRKPK-V 81

Query: 484 VPFETDQHLETSYSYLDVVGRTTVVIKKKNVVGEHNVPFQVYYEFSPIFMLAEPLMLITA 305
           VP +     E  Y ++   G     I KK   GE  VP  V   F     +     +I  
Sbjct: 82  VPGKLQMVAEAGYDFIR-RGVVYETIGKKE--GEKYVPLVVSLFF--FVWMMNLWSIIPV 136

Query: 304 ALLFFTACIAY 272
           A    T+ IAY
Sbjct: 137 AQFPVTSIIAY 147

>SAHH_HALSA (Q9HN50) Adenosylhomocysteinase (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
          Length = 427

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 25/95 (26%), Positives = 40/95 (42%)
 Frame = -1

Query: 610 FESADGRRFANLTFGSPLLNTVVDNLTIKVVLPEGSKSPQAVVPFETDQHLETSYSYLDV 431
           +E ADGRR          LN + +   + +  P G   P  V        ++ S+    V
Sbjct: 329 YELADGRR----------LNVLAEGRLVNLASPIGLGHPVGV--------MDQSFGVQAV 370

Query: 430 VGRTTVVIKKKNVVGEHNVPFQVYYEFSPIFMLAE 326
             R  V  +++   G HNVP ++  E + I + AE
Sbjct: 371 CVRELVANREEYAAGVHNVPDELDIEIAEIKLAAE 405

>YQ58_CAEEL (Q09464) Hypothetical protein C16C10.8|
          Length = 253

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 139 CISFGEFCRRSKHDN*LHCCRNVTGACYNTGLVY 38
           C + GE C++++ +  L  CRN T +C +  LVY
Sbjct: 6   CNNCGEACKKNQVERHLFQCRNTTFSCIDCQLVY 39

>ACPD2_CLOAB (Q97DQ1) Putative acyl carrier protein phosphodiesterase 2 (EC|
           3.1.4.14) (ACP phosphodiesterase 2)
          Length = 200

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = -1

Query: 481 PFET----DQHLETSYSYLDVVGRTTVVIKKKNVVGE 383
           PFE     D++L T + +L +   TT+V +K +VVGE
Sbjct: 144 PFEMYEMGDRYLRTIFGFLGITDFTTIVAEKLDVVGE 180

>DYHC_NEUCR (P45443) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4367

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
 Frame = -1

Query: 628  PLQDFLFESADGRRFANL-TFGSPLLNTVVDNLTIKVVLPEGSKSPQAVVPFET-DQHLE 455
            PL+D     A G + A L +FGSP L+     +   V +P+G         ++T  QH+ 
Sbjct: 2515 PLKD---RKAFGDKVAGLASFGSPPLDGTSSLIDFTVTMPQGE--------WQTWQQHVP 2563

Query: 454  TSYSYLDVVGRTTVVIKKKNVVGEHNVPFQVYYEFSPIFMLAEP 323
            T       V +T VVI   + +   +V +    E  P+ +   P
Sbjct: 2564 TIEVNTHSVTQTDVVIPTLDTIRHEDVLYSWLAEHKPLLLCGPP 2607


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,824,573
Number of Sequences: 219361
Number of extensions: 1675456
Number of successful extensions: 4638
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4634
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)