| Clone Name | rbags25f23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY065971.1| Triticum aestivum phosphoethanolamine methyltransferase mRNA, complete cds Length = 1782 Score = 708 bits (357), Expect = 0.0 Identities = 436/459 (94%), Gaps = 5/459 (1%) Strand = Plus / Minus Query: 147 gcaccgatcctctttatttaattcttaaccgaagccgaagccgctctgcttccggatcat 206 |||||||||||||||||||| ||||||| | | ||||| |||||||||||||||||| Sbjct: 1635 gcaccgatcctctttattta-ttcttaat---aacagaagcggctctgcttccggatcat 1580 Query: 207 cgcgtagcgtggcgtcgctgctcggcggccagatcacttggtcgcgatgaacagccccca 266 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1579 cgcgtc-cacggcgtcgctgctcggcggccagatcacttggtcgcgatgaacagccccca 1521 Query: 267 cttctgctcgccggcggagctccgcttcagcttcgcgctccacccgttgacgatgtcgtc 326 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1520 cttctgctcgccggcagagctccgcttcagcttcgcgctccagccgttgacgatgtcgtc 1461 Query: 327 gtagtcctcctggctgaagtccgccaggaaggcctccttgttcttctcggtctcgcccag 386 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1460 gtagtcctcctgggtgaagtccgccaggaaggcctccttgttcttctcggtctcgcccag 1401 Query: 387 ctccctctccaggaccctcaggaactggtcggtgcggtcttcggcgatgacgtcgtggaa 446 ||||||||||||||||||||||||||||||||||||||| || |||| ||| || ||||| Sbjct: 1400 ctccctctccaggaccctcaggaactggtcggtgcggtcctcagcgacgacatcatggaa 1341 Query: 447 accggcatcctcaagcatctttccgtaggtcttcacatcatggaggtcatagcctctctg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1340 accggcatcctcaagcatctttccgtaggtcttcacatcatggaggtcatagcctctctg 1281 Query: 507 cttgatgtacgcagcgaattcctctgatggcgtcccagggctcctgcagtagtcactgat 566 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1280 cttgatgtacgcagcgaattcctctgatggtgtcccagggctcctgcagtagtcactgat 1221 Query: 567 cagcactttgccaccaggcttcagccacttgaagaagtt 605 |||||||||||| |||||||| ||||||||||||||||| Sbjct: 1220 cagcactttgcccccaggcttgagccacttgaagaagtt 1182 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/45 (93%), Gaps = 2/45 (4%) Strand = Plus / Minus Query: 40 acgtacgtacacatcat--tatcttacagatccgggtgcccggcc 82 |||||||||||||| || |||||||||||||||||||||||||| Sbjct: 1691 acgtacgtacacattatcttatcttacagatccgggtgcccggcc 1647
>ref|XM_475841.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 307 bits (155), Expect = 2e-80 Identities = 308/359 (85%) Strand = Plus / Minus Query: 244 ttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagcttcgcg 303 ||||| || ||||||||||||||| ||||||| ||||| ||||||||||||||||||||| Sbjct: 1484 ttggttgcaatgaacagcccccacctctgctcaccggcagagctccgcttcagcttcgcg 1425 Query: 304 ctccacccgttgacgatgtcgtcgtagtcctcctggctgaagtccgccaggaaggcctcc 363 |||| ||||| || ||||| ||||||||||||||| ||||||| |||| |||||| || Sbjct: 1424 ttccagccgttcacaatgtcatcgtagtcctcctgggtgaagtctgccatgaaggcttct 1365 Query: 364 ttgttcttctcggtctcgcccagctccctctccaggaccctcaggaactggtcggtgcgg 423 ||||||||||| || | |||||||| | || || | |||||||||||| |||||| Sbjct: 1364 ttgttcttctcaacttcagcaagctccctttgaagaacacgcaggaactggtccgtgcgg 1305 Query: 424 tcttcggcgatgacgtcgtggaaaccggcatcctcaagcatctttccgtaggtcttcaca 483 ||||| || ||||| | |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1304 tcttcagcaatgacatgatggaaaccagcatcctcaagcatctttccgtaagtcttcaca 1245 Query: 484 tcatggaggtcatagcctctctgcttgatgtacgcagcgaattcctctgatggcgtccca 543 || ||||||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||| Sbjct: 1244 tcgtggaggtcatagcctctctgcttaatgtaagcagcaaattcttctgatggtttccca 1185 Query: 544 gggctcctgcagtagtcactgatcagcactttgccaccaggcttcagccacttgaagaa 602 || |||| ||||| |||||||| || |||||||| ||||| ||||||||||||||||| Sbjct: 1184 ggattcctacagtaatcactgatgaggactttgcccccaggtttcagccacttgaagaa 1126
>gb|AY103779.1| Zea mays PCO126548 mRNA sequence Length = 2333 Score = 204 bits (103), Expect = 2e-49 Identities = 304/371 (81%) Strand = Plus / Minus Query: 233 ggccagatcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgct 292 ||||| |||||||||| || ||||||| ||||||| ||||||||||||| |||||||| | Sbjct: 1913 ggccaaatcacttggtggcaatgaacaacccccacctctgctcgccggcagagctccgtt 1854 Query: 293 tcagcttcgcgctccacccgttgacgatgtcgtcgtagtcctcctggctgaagtccgcca 352 ||||||||||| |||| || || || |||||||| |||||||||||| ||||||| |||| Sbjct: 1853 tcagcttcgcgttccagccattcacaatgtcgtcatagtcctcctgggtgaagtctgcca 1794 Query: 353 ggaaggcctccttgttcttctcggtctcgcccagctccctctccaggaccctcaggaact 412 |||| || || |||||||| || || || | |||||||| || || ||| ||||| Sbjct: 1793 ggaaagcgtctttgttcttttcaacttcacctatctccctctgtagaacattcaagaact 1734 Query: 413 ggtcggtgcggtcttcggcgatgacgtcgtggaaaccggcatcctcaagcatctttccgt 472 | || ||||| ||||| |||||||| | || ||||| ||||||| ||||||| ||| | Sbjct: 1733 gctcagtgcgatcttccgcgatgacattatgaaaaccagcatccttcagcatctgtccat 1674 Query: 473 aggtcttcacatcatggaggtcatagcctctctgcttgatgtacgcagcgaattcctctg 532 | | |||||| || || |||||||||||||||||||| ||||||||||| ||||| |||| Sbjct: 1673 aagccttcacgtcgtgaaggtcatagcctctctgcttaatgtacgcagcaaattcttctg 1614 Query: 533 atggcgtcccagggctcctgcagtagtcactgatcagcactttgccaccaggcttcagcc 592 |||| | ||||| || | |||||||| ||||| || |||||||| || ||||| |||| Sbjct: 1613 atggttttccaggattcttacagtagtcgctgattaggactttgccgccgggctttagcc 1554 Query: 593 acttgaagaag 603 | ||||||||| Sbjct: 1553 atttgaagaag 1543
>gb|AY626156.3| Zea mays putative phosphoethanolamine N-methyltransferase (PEAMT) mRNA, complete cds Length = 1806 Score = 155 bits (78), Expect = 2e-34 Identities = 297/370 (80%) Strand = Plus / Minus Query: 233 ggccagatcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgct 292 ||||| |||||||||| || ||||||| ||||||| ||||||| ||| | |||||||| | Sbjct: 1647 ggccaaatcacttggtggcaatgaacaacccccacctctgctcaccgccagagctccgtt 1588 Query: 293 tcagcttcgcgctccacccgttgacgatgtcgtcgtagtcctcctggctgaagtccgcca 352 ||||||||||| |||| ||||| || |||||||| |||||||||||| ||||||| |||| Sbjct: 1587 tcagcttcgcgttccagccgttcacaatgtcgtcatagtcctcctgggtgaagtctgcca 1528 Query: 353 ggaaggcctccttgttcttctcggtctcgcccagctccctctccaggaccctcaggaact 412 |||| || || |||||||| || || || | |||||||| || || ||| ||||| Sbjct: 1527 ggaaagcgtctttgttcttttcaacttcacctatctccctctgtagaacattcaagaact 1468 Query: 413 ggtcggtgcggtcttcggcgatgacgtcgtggaaaccggcatcctcaagcatctttccgt 472 | || ||||| ||||| |||||||| | || ||||| ||||||| ||||||| ||| | Sbjct: 1467 gctcagtgcgatcttccgcgatgacattatgaaaaccagcatccttcagcatctgtccat 1408 Query: 473 aggtcttcacatcatggaggtcatagcctctctgcttgatgtacgcagcgaattcctctg 532 | | || ||| |||||||| ||||| || |||||||| ||||| | || || || |||| Sbjct: 1407 aagcctccacgtcatggagatcataacccctctgcttaatgtatgttgcaaactcttctg 1348 Query: 533 atggcgtcccagggctcctgcagtagtcactgatcagcactttgccaccaggcttcagcc 592 |||| | ||||| ||| ||||||| |||||||| || || || || ||||| ||||||| Sbjct: 1347 atggttttccaggactcttgcagtaatcactgattagaacctttcccccaggtttcagcc 1288 Query: 593 acttgaagaa 602 | |||||||| Sbjct: 1287 atttgaagaa 1278
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 147 bits (74), Expect = 5e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 465 ctttccgtaggtcttcacatcatggaggtcatagcctctctgcttgatgtacgcagcgaa 524 ||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| || Sbjct: 15156 ctttccgtaagtcttcacatcgtggaggtcatagcctctctgcttaatgtaagcagcaaa 15215 Query: 525 ttcctctgatggcgtcccagggctcctgcagtagtcactgatcagcactttgccaccagg 584 ||| |||||||| ||||||| |||| ||||| |||||||| || |||||||| ||||| Sbjct: 15216 ttcttctgatggtttcccaggattcctacagtaatcactgatgaggactttgcccccagg 15275 Query: 585 cttcagccacttgaagaa 602 ||||||||||||||||| Sbjct: 15276 tttcagccacttgaagaa 15293 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 239 atcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagct 298 |||| ||||| || ||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 14613 atcatttggttgcaatgaacagcccccacctctgctcaccggcagagctccgcttcagct 14672 Query: 299 tcgcgctccacccgttgacgatgtcgtcgtagtcctcctg 338 ||||| |||| ||||| || ||||| |||||||||||||| Sbjct: 14673 tcgcgttccagccgttcacaatgtcatcgtagtcctcctg 14712 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 411 ctggtcggtgcggtcttcggcgatgacgtcgtggaaaccggcatcctcaagcatct 466 |||||| ||||||||||| || ||||| | |||||||| |||||||||||||||| Sbjct: 14999 ctggtccgtgcggtcttcagcaatgacatgatggaaaccagcatcctcaagcatct 15054 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 335 cctggctgaagtccgccaggaaggcctccttgttcttctc 374 ||||| ||||||| |||| |||||| || ||||||||||| Sbjct: 14799 cctgggtgaagtctgccatgaaggcttctttgttcttctc 14838
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 147 bits (74), Expect = 5e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 465 ctttccgtaggtcttcacatcatggaggtcatagcctctctgcttgatgtacgcagcgaa 524 ||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| || Sbjct: 40997 ctttccgtaagtcttcacatcgtggaggtcatagcctctctgcttaatgtaagcagcaaa 41056 Query: 525 ttcctctgatggcgtcccagggctcctgcagtagtcactgatcagcactttgccaccagg 584 ||| |||||||| ||||||| |||| ||||| |||||||| || |||||||| ||||| Sbjct: 41057 ttcttctgatggtttcccaggattcctacagtaatcactgatgaggactttgcccccagg 41116 Query: 585 cttcagccacttgaagaa 602 ||||||||||||||||| Sbjct: 41117 tttcagccacttgaagaa 41134 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 239 atcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagct 298 |||| ||||| || ||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 40454 atcatttggttgcaatgaacagcccccacctctgctcaccggcagagctccgcttcagct 40513 Query: 299 tcgcgctccacccgttgacgatgtcgtcgtagtcctcctg 338 ||||| |||| ||||| || ||||| |||||||||||||| Sbjct: 40514 tcgcgttccagccgttcacaatgtcatcgtagtcctcctg 40553 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 411 ctggtcggtgcggtcttcggcgatgacgtcgtggaaaccggcatcctcaagcatct 466 |||||| ||||||||||| || ||||| | |||||||| |||||||||||||||| Sbjct: 40840 ctggtccgtgcggtcttcagcaatgacatgatggaaaccagcatcctcaagcatct 40895 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 335 cctggctgaagtccgccaggaaggcctccttgttcttctc 374 ||||| ||||||| |||| |||||| || ||||||||||| Sbjct: 40640 cctgggtgaagtctgccatgaaggcttctttgttcttctc 40679
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 147 bits (74), Expect = 5e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 465 ctttccgtaggtcttcacatcatggaggtcatagcctctctgcttgatgtacgcagcgaa 524 ||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| || Sbjct: 27008574 ctttccgtaagtcttcacatcgtggaggtcatagcctctctgcttaatgtaagcagcaaa 27008633 Query: 525 ttcctctgatggcgtcccagggctcctgcagtagtcactgatcagcactttgccaccagg 584 ||| |||||||| ||||||| |||| ||||| |||||||| || |||||||| ||||| Sbjct: 27008634 ttcttctgatggtttcccaggattcctacagtaatcactgatgaggactttgcccccagg 27008693 Query: 585 cttcagccacttgaagaa 602 ||||||||||||||||| Sbjct: 27008694 tttcagccacttgaagaa 27008711 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 239 atcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagct 298 |||| ||||| || ||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 27008031 atcatttggttgcaatgaacagcccccacctctgctcaccggcagagctccgcttcagct 27008090 Query: 299 tcgcgctccacccgttgacgatgtcgtcgtagtcctcctg 338 ||||| |||| ||||| || ||||| |||||||||||||| Sbjct: 27008091 tcgcgttccagccgttcacaatgtcatcgtagtcctcctg 27008130 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 411 ctggtcggtgcggtcttcggcgatgacgtcgtggaaaccggcatcctcaagcatct 466 |||||| ||||||||||| || ||||| | |||||||| |||||||||||||||| Sbjct: 27008417 ctggtccgtgcggtcttcagcaatgacatgatggaaaccagcatcctcaagcatct 27008472 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 335 cctggctgaagtccgccaggaaggcctccttgttcttctc 374 ||||| ||||||| |||| |||||| || ||||||||||| Sbjct: 27008217 cctgggtgaagtctgccatgaaggcttctttgttcttctc 27008256
>gb|AY105261.1| Zea mays PCO129777 mRNA sequence Length = 1012 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Minus Query: 480 cacatcatggaggtcatagcctctctgcttgatgtacgcagcgaattcctctgatggcgt 539 |||| |||| |||||||| ||||||||||| |||||||| || |||||||||||||| | Sbjct: 871 cacagcatgtaggtcataacctctctgcttaatgtacgctgcaaattcctctgatggttt 812 Query: 540 cccagggctcctgcagtagtcactgatcagcactttgccaccaggcttcagccacttgaa 599 |||||| |||||||||||||||||||| || || ||||| |||||||||||||||||||| Sbjct: 811 cccaggactcctgcagtagtcactgataaggaccttgcccccaggcttcagccacttgaa 752
>ref|NM_192178.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 97.6 bits (49), Expect = 4e-17 Identities = 160/197 (81%) Strand = Plus / Minus Query: 406 aggaactggtcggtgcggtcttcggcgatgacgtcgtggaaaccggcatcctcaagcatc 465 |||||||| |||||||||||||| || ||||| || |||||||| |||| |||||||||| Sbjct: 1334 aggaactgatcggtgcggtcttcagcaatgacatcatggaaaccagcattctcaagcatc 1275 Query: 466 tttccgtaggtcttcacatcatggaggtcatagcctctctgcttgatgtacgcagcgaat 525 | |||||| | | | || || || |||||||| || || ||||| ||||| || ||||| Sbjct: 1274 tgtccgtaagccctgacgtcgtgaaggtcataacccctttgcttaatgtaagctgcgaac 1215 Query: 526 tcctctgatggcgtcccagggctcctgcagtagtcactgatcagcactttgccaccaggc 585 || ||||| || ||||||||| | ||||||| ||||| || || || || || ||||| Sbjct: 1214 tcttctgaaggtttcccagggcacttgcagtaatcactaattaggaccttacccccaggt 1155 Query: 586 ttcagccacttgaagaa 602 || |||||||||||||| Sbjct: 1154 ttgagccacttgaagaa 1138 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 240 tcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagctt 299 |||||||||||||||||||||||||||| ||||||| || || || |||| | || || Sbjct: 1500 tcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagttt 1441 Query: 300 cgcgctccacccgttgacgatgtcgtcgtagtcctcctggctgaa 344 || |||| || || || ||| |||||||||||||||||||||| Sbjct: 1440 tgccttccatccattcacaatggcgtcgtagtcctcctggctgaa 1396
>gb|AY551100.1| Oryza sativa (indica cultivar-group) phosphoethanolamine N-methyltransferase (PEAMT) mRNA, complete cds Length = 1986 Score = 97.6 bits (49), Expect = 4e-17 Identities = 160/197 (81%) Strand = Plus / Minus Query: 406 aggaactggtcggtgcggtcttcggcgatgacgtcgtggaaaccggcatcctcaagcatc 465 |||||||| |||||||||||||| || ||||| || |||||||| |||| |||||||||| Sbjct: 1532 aggaactgatcggtgcggtcttcagcaatgacatcatggaaaccagcattctcaagcatc 1473 Query: 466 tttccgtaggtcttcacatcatggaggtcatagcctctctgcttgatgtacgcagcgaat 525 | |||||| | | | || || || |||||||| || || ||||| ||||| || ||||| Sbjct: 1472 tgtccgtaagccctgacgtcgtgaaggtcataacccctttgcttaatgtaagctgcgaac 1413 Query: 526 tcctctgatggcgtcccagggctcctgcagtagtcactgatcagcactttgccaccaggc 585 || ||||| || ||||||||| | ||||||| ||||| || || || || || ||||| Sbjct: 1412 tcttctgaaggtttcccagggcacttgcagtaatcactaattaggaccttacccccaggt 1353 Query: 586 ttcagccacttgaagaa 602 || |||||||||||||| Sbjct: 1352 ttgagccacttgaagaa 1336 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 239 atcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagct 298 ||||||||||||||||||||||||||||| ||||||| || || || |||| | || | Sbjct: 1699 atcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagtt 1640 Query: 299 tcgcgctccacccgttgacgatgtcgtcgtagtcctcctggctgaa 344 | || |||| || || || ||| |||||||||||||||||||||| Sbjct: 1639 ttgccttccatccattcacaatggcgtcgtagtcctcctggctgaa 1594
>dbj|AK069137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008P07, full insert sequence Length = 2069 Score = 89.7 bits (45), Expect = 1e-14 Identities = 159/197 (80%) Strand = Plus / Minus Query: 406 aggaactggtcggtgcggtcttcggcgatgacgtcgtggaaaccggcatcctcaagcatc 465 |||||||| |||||||||||||| || ||||| || |||||||| |||| |||||||||| Sbjct: 1617 aggaactgatcggtgcggtcttcagcaatgacatcatggaaaccagcattctcaagcatc 1558 Query: 466 tttccgtaggtcttcacatcatggaggtcatagcctctctgcttgatgtacgcagcgaat 525 | |||||| | | | || || || | |||||| || || ||||| ||||| || ||||| Sbjct: 1557 tgtccgtaagccctgacgtcgtgaaagtcataacccctttgcttaatgtaagctgcgaac 1498 Query: 526 tcctctgatggcgtcccagggctcctgcagtagtcactgatcagcactttgccaccaggc 585 || ||||| || ||||||||| | ||||||| ||||| || || || || || ||||| Sbjct: 1497 tcttctgaaggtttcccagggcacttgcagtaatcactaattaggaccttacccccaggt 1438 Query: 586 ttcagccacttgaagaa 602 || |||||||||||||| Sbjct: 1437 ttgagccacttgaagaa 1421 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 239 atcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagct 298 ||||||||||||||||||||||||||||| ||||||| || || || |||| | || | Sbjct: 1784 atcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagtt 1725 Query: 299 tcgcgctccacccgttgacgatgtcgtcgtagtcctcctggctgaa 344 | || |||| || || || ||| |||||||||||||||||||||| Sbjct: 1724 ttgccttccatccattcacaatggcgtcgtagtcctcctggctgaa 1679
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 239 atcacttggtcgcgatgaacagcccccacttctgctc 275 ||||||||||||||||||||||||||||| ||||||| Sbjct: 28737732 atcacttggtcgcgatgaacagcccccacctctgctc 28737696 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 415 tcggtgcggtcttcggcgatgacgtcgtggaaaccggcatcctcaagcatct 466 |||||||||||||| || ||||| || |||||||| |||| ||||||||||| Sbjct: 28737362 tcggtgcggtcttcagcaatgacatcatggaaaccagcattctcaagcatct 28737311 Score = 50.1 bits (25), Expect = 0.009 Identities = 91/113 (80%) Strand = Plus / Minus Query: 490 aggtcatagcctctctgcttgatgtacgcagcgaattcctctgatggcgtcccagggctc 549 |||||||| || || ||||| ||||| || ||||| || ||||| || ||||||||| | Sbjct: 28737193 aggtcataacccctttgcttaatgtaagctgcgaactcttctgaaggtttcccagggcac 28737134 Query: 550 ctgcagtagtcactgatcagcactttgccaccaggcttcagccacttgaagaa 602 ||||||| ||||| || || || || || ||||| || |||||||||||||| Sbjct: 28737133 ttgcagtaatcactaattaggaccttacccccaggtttgagccacttgaagaa 28737081
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 239 atcacttggtcgcgatgaacagcccccacttctgctc 275 ||||||||||||||||||||||||||||| ||||||| Sbjct: 120806 atcacttggtcgcgatgaacagcccccacctctgctc 120770 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 415 tcggtgcggtcttcggcgatgacgtcgtggaaaccggcatcctcaagcatct 466 |||||||||||||| || ||||| || |||||||| |||| ||||||||||| Sbjct: 120436 tcggtgcggtcttcagcaatgacatcatggaaaccagcattctcaagcatct 120385 Score = 50.1 bits (25), Expect = 0.009 Identities = 91/113 (80%) Strand = Plus / Minus Query: 490 aggtcatagcctctctgcttgatgtacgcagcgaattcctctgatggcgtcccagggctc 549 |||||||| || || ||||| ||||| || ||||| || ||||| || ||||||||| | Sbjct: 120267 aggtcataacccctttgcttaatgtaagctgcgaactcttctgaaggtttcccagggcac 120208 Query: 550 ctgcagtagtcactgatcagcactttgccaccaggcttcagccacttgaagaa 602 ||||||| ||||| || || || || || ||||| || |||||||||||||| Sbjct: 120207 ttgcagtaatcactaattaggaccttacccccaggtttgagccacttgaagaa 120155
>dbj|AK102037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081D06, full insert sequence Length = 3221 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 239 atcacttggtcgcgatgaacagcccccacttctgctc 275 ||||||||||||||||||||||||||||| ||||||| Sbjct: 2984 atcacttggtcgcgatgaacagcccccacctctgctc 2948 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 415 tcggtgcggtcttcggcgatgacgtcgtggaaaccggcatcctcaagcatct 466 |||||||||||||| || ||||| || |||||||| |||| ||||||||||| Sbjct: 2614 tcggtgcggtcttcagcaatgacatcatggaaaccagcattctcaagcatct 2563 Score = 50.1 bits (25), Expect = 0.009 Identities = 91/113 (80%) Strand = Plus / Minus Query: 490 aggtcatagcctctctgcttgatgtacgcagcgaattcctctgatggcgtcccagggctc 549 |||||||| || || ||||| ||||| || ||||| || ||||| || ||||||||| | Sbjct: 2445 aggtcataacccctttgcttaatgtaagctgcgaactcttctgaaggtttcccagggcac 2386 Query: 550 ctgcagtagtcactgatcagcactttgccaccaggcttcagccacttgaagaa 602 ||||||| ||||| || || || || || ||||| || |||||||||||||| Sbjct: 2385 ttgcagtaatcactaattaggaccttacccccaggtttgagccacttgaagaa 2333
>dbj|AB196771.1| Atriplex nummularia AnPEAMT mRNA for phosphoethanolamine N-methyltransferase, complete cds Length = 1989 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 477 cttcacatcatggaggtcatagcctctctgcttgatgtacgcagcgaattcctctgatgg 536 ||||||||||||||| ||||| || |||||||||||||| || || ||||| ||| || Sbjct: 1544 cttcacatcatggagatcatatcccctctgcttgatgtatgctgcaaattcagatgaagg 1485 Query: 537 cgtcccagggctcctgcagtagtcactgatcagcactttgccaccaggcttcagccactt 596 | ||| ||| |||||||||||||||| || |||||||| || ||||||| ||| || Sbjct: 1484 tggaacagcactcttgcagtagtcactgattagaactttgcctcccggcttcaaccattt 1425 Query: 597 gaagaag 603 || |||| Sbjct: 1424 gaggaag 1418
>gb|AF237633.1|AF237633 Spinacia oleracea phosphoethanolamine N-methyltransferase (PEAMT) mRNA, complete cds Length = 2252 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 459 aagcatctttccgtaggtcttcacatcatggaggtcatagcctctctgcttgatgtacgc 518 ||||||||| || || | ||||||||| ||||| ||||| || |||||| ||||||| || Sbjct: 1516 aagcatcttgccatatgccttcacatcgtggagatcatatcccctctgcctgatgtatgc 1457 Query: 519 agcgaattcctctgatggcgtcccagggctcctgcagtagtcactgatcagcactttgcc 578 ||| ||||| |||| || || |||| ||| | ||||||||||| || || |||||||| Sbjct: 1456 agcaaattcagctgaaggtgtaccagcactcttacagtagtcactaataagaactttgcc 1397 Query: 579 accaggcttca 589 ||||| |||| Sbjct: 1396 tccaggtttca 1386
>gb|AY319479.1| Brassica napus phosphoethanolamine N-methyltransferase mRNA, complete cds Length = 1750 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 553 cagtagtcactgatcagcactttgccaccaggcttcagccacttgaagaa 602 |||||||| ||||| ||||||||||| || || || |||||||||||||| Sbjct: 1407 cagtagtcgctgatgagcactttgcctcccggtttaagccacttgaagaa 1358
>gb|AC108554.8| Rattus norvegicus 7 BAC CH230-81L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 157107 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 151 cgatcctctttatttaattcttaa 174 |||||||||||||||||||||||| Sbjct: 32346 cgatcctctttatttaattcttaa 32369
>dbj|AB090883.1| Aster tripolium mRNA for phosphoethanolamine N-methyltransferase, complete cds Length = 1870 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 481 acatcatggaggtcatagcctctctgcttgatgtac 516 ||||||||||| ||||| ||||| |||||||||||| Sbjct: 1428 acatcatggagatcatatcctctttgcttgatgtac 1393 Score = 40.1 bits (20), Expect = 8.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 552 gcagtagtcactgatcagcactttgccaccaggcttcagccacttgaagaag 603 |||||| ||||| || || ||||||||||| || |||| ||||||| ||||| Sbjct: 1357 gcagtaatcactaatgagaactttgccacctggtttcaaccacttgtagaag 1306
>dbj|AB080186.1| Suaeda japonica PEAMT mRNA for phosphoethanolamine N-methyltransferase, complete cds Length = 1779 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 481 acatcatggaggtcatagcctctctgcttgatgtacgcagcgaattc 527 ||||||||||| ||||| || |||||||| ||||| || |||||||| Sbjct: 1355 acatcatggagatcatatcccctctgcttaatgtaagcggcgaattc 1309
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 315 gacgatgtcgtcgtagtcctcc 336 |||||||||||||||||||||| Sbjct: 1075622 gacgatgtcgtcgtagtcctcc 1075601
>emb|Z35641.2|CEC38H2 Caenorhabditis elegans Cosmid C38H2, complete sequence Length = 31950 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 cacttctgctcgccggcggag 285 ||||||||||||||||||||| Sbjct: 15748 cacttctgctcgccggcggag 15768
>emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, complete sequence Length = 203360 Score = 42.1 bits (21), Expect = 2.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 16 acaaagttcagggnaacacacagcacgtacgt 47 |||||||||| | |||||||||||||||||| Sbjct: 119 acaaagttcacgcaaacacacagcacgtacgt 150
>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence Length = 536165 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 tgacgatgtcgtcgtagtcct 334 ||||||||||||||||||||| Sbjct: 377931 tgacgatgtcgtcgtagtcct 377951 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 tgacgatgtcgtcgtagtcct 334 ||||||||||||||||||||| Sbjct: 320695 tgacgatgtcgtcgtagtcct 320715
>gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete sequence Length = 177084 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 gcttcagcttcgcgctccacccgt 313 |||||||||||||| ||||||||| Sbjct: 169464 gcttcagcttcgcgatccacccgt 169487
>ref|XM_589053.2| PREDICTED: Bos taurus similar to zinc finger, MYND domain containing 15 (LOC539735), mRNA Length = 2251 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 gccaggaaggcctccttgtt 368 |||||||||||||||||||| Sbjct: 1085 gccaggaaggcctccttgtt 1066
>gb|AE007294.1| Sinorhizobium meliloti 1021 plasmid pSymA section 100 of 121 of the complete plasmid sequence Length = 9983 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cgaagccgaagccgctctgc 195 |||||||||||||||||||| Sbjct: 5324 cgaagccgaagccgctctgc 5305
>gb|AC124417.5| Mus musculus BAC clone RP24-313G11 from chromosome 18, complete sequence Length = 181811 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gtagtcctcctggctgaagt 346 |||||||||||||||||||| Sbjct: 711 gtagtcctcctggctgaagt 730
>gb|BT014526.1| Lycopersicon esculentum clone 133940F, mRNA sequence Length = 1750 Score = 40.1 bits (20), Expect = 8.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 551 tgcagtagtcactgatcagcactttgccaccaggcttcagccacttgaagaa 602 ||||||| ||||| || || |||||||| || || |||||||||||| |||| Sbjct: 1259 tgcagtaatcacttatgaggactttgcctcctggtttcagccacttgtagaa 1208
>ref|XM_757246.1| Ustilago maydis 521 hypothetical protein (UM06192.1) partial mRNA Length = 3558 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ccaacacacggccacagcat 140 |||||||||||||||||||| Sbjct: 632 ccaacacacggccacagcat 651
>emb|Z81493.1|CEF01D5 Caenorhabditis elegans Cosmid F01D5, complete sequence Length = 36127 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 tccttgttcttctcggtctc 380 |||||||||||||||||||| Sbjct: 13295 tccttgttcttctcggtctc 13276
>gb|AY223048.1| Schistosoma japonicum clone ZZD120 mRNA sequence Length = 1179 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gcagccactgcaacaacaaa 109 |||||||||||||||||||| Sbjct: 878 gcagccactgcaacaacaaa 897
>emb|AL953854.21| Human DNA sequence from clone RP11-211P14 on chromosome 9 Contains a pseudogene similar to part of a vomeronasal 2 family protein and a novel protein similar to contactin associated protein-like 3 (CNTNAP3), complete sequence Length = 157546 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tctttatttaattcttaacc 176 |||||||||||||||||||| Sbjct: 41424 tctttatttaattcttaacc 41405
>emb|BX664730.2| Human DNA sequence from clone RP11-118H15 on chromosome 9 Contains a novel gene, complete sequence Length = 171251 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tctttatttaattcttaacc 176 |||||||||||||||||||| Sbjct: 158902 tctttatttaattcttaacc 158883
>emb|AL935212.11| Human DNA sequence from clone RP11-160N1 on chromosome 9 Contains eight novel pseudogenes, two novel genes and three CpG islands, complete sequence Length = 181647 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tctttatttaattcttaacc 176 |||||||||||||||||||| Sbjct: 548 tctttatttaattcttaacc 567
>emb|AL954685.6| Human DNA sequence from clone RP11-237M21 on chromosome 9, complete sequence Length = 130124 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tctttatttaattcttaacc 176 |||||||||||||||||||| Sbjct: 70560 tctttatttaattcttaacc 70579
>emb|AL953883.5| Human DNA sequence from clone RP11-246P17 on chromosome 9, complete sequence Length = 102894 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tctttatttaattcttaacc 176 |||||||||||||||||||| Sbjct: 81891 tctttatttaattcttaacc 81872
>emb|AL590311.5| Human DNA sequence from clone RP11-20F16 on chromosome 9 Contains the 5' end of the GDA gene for guanine deaminase and a CpG island, complete sequence Length = 131933 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tcctctttatttaattctta 173 |||||||||||||||||||| Sbjct: 24338 tcctctttatttaattctta 24319
>emb|AL353791.7| Human DNA sequence from clone RP11-475B17 on chromosome 9 Contains the 3' end of novel protein similar to contactin associated protein-like 3 (CNTNAP3) and a pseudogene similar to part of vomeronasal 2 family, complete sequence Length = 208233 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tctttatttaattcttaacc 176 |||||||||||||||||||| Sbjct: 104698 tctttatttaattcttaacc 104717
>gb|AC095787.7| Rattus norvegicus 14 BAC CH230-9M3 (Children's Hospital Oakland Research Institute) complete sequence Length = 242500 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 ttcagccacttgaagaagtt 605 |||||||||||||||||||| Sbjct: 75813 ttcagccacttgaagaagtt 75794
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 cgctgctcggcggccagatc 241 |||||||||||||||||||| Sbjct: 96941 cgctgctcggcggccagatc 96960
>gb|AC007995.23| Mus musculus, clone RP23-266E9, complete sequence Length = 204193 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gtagtcctcctggctgaagt 346 |||||||||||||||||||| Sbjct: 185351 gtagtcctcctggctgaagt 185370
>emb|AL683804.15| Mouse DNA sequence from clone RP23-17F2 on chromosome 1 Contains a SEC61 gamma subunit (Sec61g) pseudogene, a limb expression 1 homolog (chicken) (Lix1) pseudogene, a novel pseudogene, the 5' end of the gene for an ortholog of human Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 RAPH1 and a CpG island, complete sequence Length = 198631 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 acatcattatcttacagatc 69 |||||||||||||||||||| Sbjct: 85216 acatcattatcttacagatc 85235
>gb|AC010571.8| Drosophila melanogaster 3L BAC RP98-22O3 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 169138 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cggcgatgacgtcgtggaaa 447 |||||||||||||||||||| Sbjct: 62502 cggcgatgacgtcgtggaaa 62521
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 tggcgtcgctgctcggcggc 235 |||||||||||||||||||| Sbjct: 1266679 tggcgtcgctgctcggcggc 1266698
>gb|DQ397605.2| Cenarchaeum symbiosum clone C09D08, complete sequence Length = 35950 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 acatcatggaggtcatagcc 500 |||||||||||||||||||| Sbjct: 20511 acatcatggaggtcatagcc 20492
>gb|DQ397566.1| Cenarchaeum symbiosum clone C06D08, complete sequence Length = 38715 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 acatcatggaggtcatagcc 500 |||||||||||||||||||| Sbjct: 15018 acatcatggaggtcatagcc 15037
>gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, complete sequence Length = 142656 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 atcctctttatttaattctt 172 |||||||||||||||||||| Sbjct: 125275 atcctctttatttaattctt 125294
>ref|NM_143309.1| Drosophila melanogaster CG13972-RA (CG13972), mRNA Length = 1347 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 gcttcagcttcgcgctccacccgt 313 |||||||||||||| ||||||||| Sbjct: 1094 gcttcagcttcgcgatccacccgt 1071
>gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, complete sequence Length = 154939 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 atcctctttatttaattctt 172 |||||||||||||||||||| Sbjct: 76263 atcctctttatttaattctt 76282
>gb|AC025125.15| Homo sapiens, clone RP11-147K16, complete sequence Length = 157481 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 tcctctgatggcgtcccagg 545 |||||||||||||||||||| Sbjct: 16997 tcctctgatggcgtcccagg 16978
>ref|NM_064535.2| Caenorhabditis elegans F01D5.6 (F01D5.6) mRNA, complete cds Length = 1303 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 tccttgttcttctcggtctc 380 |||||||||||||||||||| Sbjct: 1109 tccttgttcttctcggtctc 1090
>gb|AY194228.1| Enterobacter cloacae succinate dehydrogenase cytochrome b-556 subunit (sdhC), succinate dehydrogenase hydrophobic membrane anchor protein (sdhD), succinate dehydrogenase flavoprotein subunit (sdhA), and succinate dehydrogenase iron-sulfur protein (sdhB) genes, complete cds; and 2-oxoglutarate dehydrogenase E1 component (sucA) gene, partial cds Length = 6771 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 ccccacttctgctcgccggcggag 285 ||||||||||||||||||| |||| Sbjct: 6123 ccccacttctgctcgccggaggag 6100
>dbj|AB221008.1| Beta vulgaris BvPEAMT1 mRNA for phosphoethanolamine N-methyltransferase, complete cds Length = 2030 Score = 40.1 bits (20), Expect = 8.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 551 tgcagtagtcactgatcagcactttgccaccaggcttcagccacttgaagaa 602 ||||||||||||| || || |||||||| ||||| |||| ||| ||| |||| Sbjct: 1440 tgcagtagtcactaattagaactttgcctccaggtttcaaccatttgtagaa 1389
>gb|AC007817.7|AC007817 Drosophila melanogaster, chromosome 3R, region 98A-98B, BAC clone BACR15D01, complete sequence Length = 180499 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 gcttcagcttcgcgctccacccgt 313 |||||||||||||| ||||||||| Sbjct: 30801 gcttcagcttcgcgatccacccgt 30824
>gb|AC006207.5| Homo sapiens 12 PAC RPCI3-488H23 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 109003 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 ttccggatcatcgcgtagcgtggc 219 |||| ||||||||||||||||||| Sbjct: 92074 ttcctgatcatcgcgtagcgtggc 92051
>emb|BX545849.7| Mouse DNA sequence from clone RP23-232N16 on chromosome 4, complete sequence Length = 114104 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcaacaacaaatcacaccac 118 |||||||||||||||||||| Sbjct: 44262 gcaacaacaaatcacaccac 44243
>gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequence Length = 35159 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ccctctccaggaccctcagg 408 |||||||||||||||||||| Sbjct: 34562 ccctctccaggaccctcagg 34543
>emb|AJ234432.1|HVU234432 Hordeum vulgare partial mRNA; clone cMWG0706 Length = 724 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 ccaccaggcttcagccactt 596 |||||||||||||||||||| Sbjct: 396 ccaccaggcttcagccactt 377
>gb|AE003761.2| Drosophila melanogaster chromosome 3R, section 99 of 118 of the complete sequence Length = 224910 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 gcttcagcttcgcgctccacccgt 313 |||||||||||||| ||||||||| Sbjct: 79987 gcttcagcttcgcgatccacccgt 80010
>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete sequence Length = 294272 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cggcgatgacgtcgtggaaa 447 |||||||||||||||||||| Sbjct: 130221 cggcgatgacgtcgtggaaa 130240
>dbj|AP001803.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-100N3, complete sequences Length = 159372 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 tcctctttatttaattctta 173 |||||||||||||||||||| Sbjct: 103987 tcctctttatttaattctta 104006
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 531 tgatggcgtcccagggctcctgca 554 |||||||| ||||||||||||||| Sbjct: 1679606 tgatggcgccccagggctcctgca 1679583
>gb|AC142112.3| Mus musculus BAC clone RP24-87H1 from 12, complete sequence Length = 229085 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 ctgatcagcactttgccacc 581 |||||||||||||||||||| Sbjct: 87307 ctgatcagcactttgccacc 87288
>emb|AL591855.11| Human DNA sequence from clone RP11-4C12 on chromosome 9, complete sequence Length = 153214 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tctttatttaattcttaacc 176 |||||||||||||||||||| Sbjct: 6785 tctttatttaattcttaacc 6804 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,855,441 Number of Sequences: 3902068 Number of extensions: 4855441 Number of successful extensions: 100679 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100278 Number of HSP's gapped (non-prelim): 396 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)