>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 2)
          Length = 371

 Score =  167 bits (423), Expect = 1e-41
 Identities = 80/85 (94%), Positives = 82/85 (96%)
 Frame = -3

Query: 451 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGADVSA 272
           PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEK+EG D+SA
Sbjct: 287 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKAEGVDLSA 346

Query: 271 YGSSKVCTTQAPVQLGSLRAADGKE 197
           YGSSKV  TQAPVQLGSLRAADGKE
Sbjct: 347 YGSSKVVQTQAPVQLGSLRAADGKE 371

>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 1) (OsGME-1)
          Length = 378

 Score =  161 bits (408), Expect = 6e-40
 Identities = 74/85 (87%), Positives = 81/85 (95%)
 Frame = -3

Query: 451 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGADVSA 272
           PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTM+LKDGLR TYFWIKEQ+EKEK++G D++ 
Sbjct: 294 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAG 353

Query: 271 YGSSKVCTTQAPVQLGSLRAADGKE 197
           YGSSKV +TQAPVQLGSLRAADGKE
Sbjct: 354 YGSSKVVSTQAPVQLGSLRAADGKE 378

>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase)
          Length = 377

 Score =  159 bits (401), Expect = 4e-39
 Identities = 75/85 (88%), Positives = 80/85 (94%)
 Frame = -3

Query: 451 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGADVSA 272
           PIHHIPGPEGVRGRNSDN LIKEKLGWAP MRLK+GLRITYFWIKEQ+EKEK++G+DVS 
Sbjct: 293 PIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSL 352

Query: 271 YGSSKVCTTQAPVQLGSLRAADGKE 197
           YGSSKV  TQAPVQLGSLRAADGKE
Sbjct: 353 YGSSKVVGTQAPVQLGSLRAADGKE 377

>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2) (AtGER2)
          Length = 328

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -3

Query: 430 PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEK 296
           P+G   +  D++ +   LGW P + LKDGL  TY W  E + ++K
Sbjct: 284 PDGTPRKLMDSSKLAS-LGWTPKISLKDGLSQTYEWYLENVVQKK 327

>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1)
          Length = 328

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -3

Query: 430 PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEK 296
           P+G   +  D++ I+E +GW P + LK+GL  TY W  E +   K
Sbjct: 284 PDGTPRKLMDSSKIQE-MGWKPKVPLKEGLVETYKWYVENVISAK 327

>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2)
          Length = 347

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -3

Query: 430 PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITY-FWIKEQ 311
           PEGV  R  D+  ++ KLGW P + L+DG++  Y F+++ +
Sbjct: 300 PEGVARRVVDSGRMR-KLGWEPRVALRDGIQDLYRFYLRHE 339

>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1) (AtGER1) (AtFX)
          Length = 312

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 430 PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFW 323
           P+G   +  D++ +   LGW P + L+DGL  TY W
Sbjct: 270 PDGTPRKLMDSSKLAS-LGWTPKVSLRDGLSQTYDW 304

>Y2889_PHOPR (Q6LN94) UPF0247 protein PBPRA2889|
          Length = 156

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
 Frame = -3

Query: 451 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQLEK 302
           P+  I  P G RG+N+D   I +K G A    +  G RI         W    + +QL+ 
Sbjct: 32  PLELIEIPAGKRGKNADIARILQKEGEAMLATVAKGNRIVTLDIPGKRWDTGQLAQQLDS 91

Query: 301 EKSEGADVS 275
            K +G DVS
Sbjct: 92  WKLDGRDVS 100

>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 328

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 403 DNTLIKEKLGWAPTMRLKDGLRITYFW 323
           D+T I+ +LG+AP + L DGL  T  W
Sbjct: 283 DSTRIQRELGFAPAVDLADGLAATVAW 309

>Y1298_PHOLL (Q7N760) UPF0247 protein plu1298|
          Length = 156

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
 Frame = -3

Query: 451 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQLEK 302
           P   I  P G RG+N+D   I EK G      +  G RI         W    + +QLE 
Sbjct: 32  PFDLIEIPAGKRGKNADIKRILEKEGEQMLAAVSKGSRIVTLDIPGSRWETPQLAQQLEH 91

Query: 301 EKSEGADVS 275
            K +G DVS
Sbjct: 92  WKRDGRDVS 100

>RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 348

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -3

Query: 403 DNTLIKEKLGWAPTM-RLKDGLRITYFWIKEQLEKEKSEGADVSA 272
           D+T ++E+LGW P     ++GL  T  W  E  +  K+E   V A
Sbjct: 294 DSTKLREELGWKPQFTNFEEGLEDTIKWYTEHEDWWKAEKEAVEA 338

>YQAK_BACSU (P45908) Hypothetical protein yqaK|
          Length = 284

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 379 LGWAPTMRLKDGLRITYFWIKEQLEKEKSE 290
           +G+A    L +G R T +W K Q+EK K +
Sbjct: 158 IGYAAYFELINGFRKTVYWTKAQVEKHKKK 187

>PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3 (Ligand of|
            Numb-protein X 3) (Semaphorin cytoplasmic
            domain-associated protein 3) (SEMACAP3 protein)
          Length = 1066

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 324  QKYVILSPSXSLMVGAQPSFSLMSVLSELRPRTPSGPGMWW 446
            Q Y+ L    S +  AQ   SL+S+  +L   TPS P M W
Sbjct: 881  QSYMQLIQQKSAVEYAQSQMSLVSMCKDLSSPTPSEPRMEW 921

>Y723_VIBPA (Q87RQ4) UPF0247 protein VP0723|
          Length = 156

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
 Frame = -3

Query: 451 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQLEK 302
           P+  +    G RG+N+D   I +K G A    +  G RI         W    + EQLE 
Sbjct: 32  PLELVEISAGKRGKNADIARILQKEGEAMLAAVPKGNRIVTLDIPGKKWDTPQLAEQLEA 91

Query: 301 EKSEGADVS 275
            K +G DVS
Sbjct: 92  WKLDGRDVS 100

>Y1304_ERWCT (Q6D7M1) UPF0247 protein ECA1304|
          Length = 156

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
 Frame = -3

Query: 451 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQLEK 302
           P   +  P G RG+N+D   I E+ G      +  G RI         W    + +QLE+
Sbjct: 32  PFELLEIPAGKRGKNADIKRILEREGEQMLAAVGKGNRIVTLDIPGTRWETPHLAQQLER 91

Query: 301 EKSEGADVS 275
            K +G DVS
Sbjct: 92  WKQDGRDVS 100

>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 421

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 412 RNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKE 299
           R  D    K  LGW P + L++GL  T  + +++LE +
Sbjct: 362 RKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKELEHQ 399

>Y907_VIBVY (Q7MN10) UPF0247 protein VV0907|
          Length = 156

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
 Frame = -3

Query: 451 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQLEK 302
           P+  I    G RG+N+D   I +K G A    +  G RI         W    + +QLE 
Sbjct: 32  PLELIEITAGKRGKNADIARILQKEGEAMLAAIPKGNRIVTLDIPGKKWDTPELAQQLEA 91

Query: 301 EKSEGADVS 275
            K +G DVS
Sbjct: 92  WKLDGRDVS 100

>Y277_VIBVU (Q8DFD8) UPF0247 protein VV1_0277|
          Length = 156

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
 Frame = -3

Query: 451 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQLEK 302
           P+  I    G RG+N+D   I +K G A    +  G RI         W    + +QLE 
Sbjct: 32  PLELIEITAGKRGKNADIARILQKEGEAMLAAIPKGNRIVTLDIPGKKWDTPELAQQLEA 91

Query: 301 EKSEGADVS 275
            K +G DVS
Sbjct: 92  WKLDGRDVS 100

>NOLK_AZOCA (P33217) Nodulation protein nolK|
          Length = 312

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 448 IHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITY 329
           ++ +  P G+R +  D T +   LGW P   L+ G+R TY
Sbjct: 263 VYDLNRPVGMRSKLMDITHLTA-LGWVPERSLEGGIRSTY 301

>MBL1_MOUSE (P39039) Mannose-binding protein A precursor (MBP-A)|
           (Mannan-binding protein) (Ra-reactive factor
           polysaccharide-binding component p28B polypeptide) (RaRF
           p28B)
          Length = 239

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -3

Query: 436 PGPEGVRGRNSDNTLIKEKLG--WAPTMRLKDGLRIT 332
           PGP+G +G + DN  I+EKL    A    LK  L++T
Sbjct: 77  PGPKGQKGDHGDNRAIEEKLANMEAEIRILKSKLQLT 113


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,911,400
Number of Sequences: 219361
Number of extensions: 1172476
Number of successful extensions: 3146
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3143
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)