ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ASH2L_HUMAN (Q9UBL3) Set1/Ash2 histone methyltransferase complex... 33 0.64
2ASH2L_MOUSE (Q91X20) Set1/Ash2 histone methyltransferase complex... 33 0.64
3ERG24_FUSSO (Q01447) Delta(14)-sterol reductase (EC 1.3.1.70) (C... 32 1.9
4TRF3_THEAC (O93655) Tricorn protease-interacting factor F3 (EC 3... 31 4.1
5TREA_YEAST (P32356) Neutral trehalase (EC 3.2.1.28) (Alpha,alpha... 30 9.2
6NPC2_DEBHA (Q6BV42) Phosphatidylglycerol/phosphatidylinositol tr... 30 9.2

>ASH2L_HUMAN (Q9UBL3) Set1/Ash2 histone methyltransferase complex subunit ASH2|
           (ASH2-like protein)
          Length = 628

 Score = 33.5 bits (75), Expect = 0.64
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -1

Query: 505 WNEKYGTDWRMKIGKLLMNGYSEGELIITHVPLNTSPEDYSEKIKLEDP*RDPPLYTY 332
           W  K GT +   IGK   +GY +G+++  ++ L   PED      L D  +D  L  +
Sbjct: 460 WRSKKGTKFHQSIGKHYSSGYGQGDVLGFYINL---PEDTETAKSLPDTYKDKALIKF 514



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>ASH2L_MOUSE (Q91X20) Set1/Ash2 histone methyltransferase complex subunit ASH2|
           (ASH2-like protein)
          Length = 623

 Score = 33.5 bits (75), Expect = 0.64
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -1

Query: 505 WNEKYGTDWRMKIGKLLMNGYSEGELIITHVPLNTSPEDYSEKIKLEDP*RDPPLYTY 332
           W  K GT +   IGK   +GY +G+++  ++ L   PED      L D  +D  L  +
Sbjct: 455 WRSKKGTKFHQSIGKHYSSGYGQGDVLGFYINL---PEDTETAKSLPDTYKDKALIKF 509



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>ERG24_FUSSO (Q01447) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol|
           reductase) (Sterol C14-reductase)
          Length = 485

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = -1

Query: 616 GEDLSEGEAK---VLVEYGWIPNTGLATLLNYRDRVVHDRWNEKYGTDW 479
           G ++ +GEAK   +L+ Y +I     A LL +R+R   D+ + KYG DW
Sbjct: 423 GREVVQGEAKGWGMLITYFYI--LYFAILLIHRERRDDDKCHRKYGEDW 469



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>TRF3_THEAC (O93655) Tricorn protease-interacting factor F3 (EC 3.4.11.-)|
          Length = 780

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 27/84 (32%), Positives = 37/84 (44%)
 Frame = -1

Query: 613 EDLSEGEAKVLVEYGWIPNTGLATLLNYRDRVVHDRWNEKYGTDWRMKIGKLLMNGYSEG 434
           ED+S    K ++EY WI N G   +   R+           G    M   + L+NG  EG
Sbjct: 396 EDVSGKPVKRVMEY-WIKNPGYPVIKLKRN-----------GRKITMYQTRFLLNGEEEG 443

Query: 433 ELIITHVPLNTSPEDYSEKIKLED 362
                 VP+N   +D  E+I LED
Sbjct: 444 RW---PVPVNIKKKDGVERILLED 464



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>TREA_YEAST (P32356) Neutral trehalase (EC 3.2.1.28) (Alpha,alpha-trehalase)|
           (Alpha,alpha-trehalose glucohydrolase)
          Length = 751

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -1

Query: 598 GEAKVLVEYGWIPNTGLATLLNYRDRVVHDRWNEKYGTD-WRMKIGKLLMNGYSEGELII 422
           G   + +E  + P+TG  TL+ Y   V   R+NE YG D + M +G L  N       ++
Sbjct: 272 GLLALAMEEHFNPSTGEKTLIGYPYAVPGGRFNELYGWDSYMMALGLLEANKTDVARGMV 331

Query: 421 TH 416
            H
Sbjct: 332 EH 333



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>NPC2_DEBHA (Q6BV42) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 196

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 567 QPYSTKTFASPSDKSSPTNSGLFSIRAVLPQLLSFIAV 680
           +P    TFA P DK  P +S +    A +PQLL+  +V
Sbjct: 49  KPEIILTFAGPDDKPVPGDSPIVQCEASVPQLLNLQSV 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,892,323
Number of Sequences: 219361
Number of extensions: 2372173
Number of successful extensions: 5276
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5274
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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