ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24p22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome... 54 6e-04
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
3dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
4dbj|AK106676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
5dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 46 0.15
6gb|AC102441.6| Mus musculus chromosome 18, clone RP24-160I12, co... 42 2.3
7gb|AC104869.6| Mus musculus chromosome 10, clone RP24-534B24, co... 42 2.3
8emb|BX293996.16| Zebrafish DNA sequence from clone DKEY-38J20 in... 42 2.3
9gb|AC159475.9| Mus musculus 10 BAC RP23-55G19 (Roswell Park Canc... 42 2.3
10gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 42 2.3
11ref|XM_451296.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A06644g ... 40 9.1
12gb|AC164428.4| Mus musculus BAC clone RP24-150D18 from chromosom... 40 9.1
13gb|AC153865.3| Mus musculus BAC RP23-373P9 (Roswell Park Cancer... 40 9.1
14emb|CR762406.10| Zebrafish DNA sequence from clone DKEY-13D23 in... 40 9.1
15emb|BX927362.10| Zebrafish DNA sequence from clone CH211-170N20 ... 40 9.1
16gb|AC002492.1|HUAC002492 Human Chromosome 16 BAC clone CIT987SK-... 40 9.1
17gb|AC121861.3| Mus musculus BAC clone RP24-108P23 from chromosom... 40 9.1
18emb|BX511042.2| Human DNA sequence from clone RP11-300L20 on chr... 40 9.1
19emb|AL158837.14| Human DNA sequence from clone RP11-102C16 on ch... 40 9.1
20gb|U94409.1|MAU94409 Microcystis aeruginosa strain UV025 plasmid... 40 9.1
21emb|AL033522.1|HS451B21 Human DNA sequence from clone RP3-451B21... 40 9.1
22emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 9.1
23emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, stra... 40 9.1
24gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete seq... 40 9.1
25emb|BX897714.6| Zebrafish DNA sequence from clone DKEY-218L23 in... 40 9.1
26emb|BX908775.18| Zebrafish DNA sequence from clone CH211-255L12 ... 40 9.1
27gb|AC112481.2| Homo sapiens 12 BAC RP11-20L19 (Roswell Park Canc... 40 9.1
28gb|AY026260.1|Y026259S02 Homo sapiens single stranded DNA bindin... 40 9.1
29dbj|AK001354.1| Homo sapiens cDNA FLJ10492 fis, clone NT2RP2000270 40 9.1
30gb|AC011921.14| Homo sapiens chromosome 17, clone RP11-15E18, co... 40 9.1
31gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park C... 40 9.1
32gb|AC098866.3| Homo sapiens BAC clone RP11-404F3 from 4, complet... 40 9.1
33gb|AC073057.6| Homo sapiens BAC clone RP11-114G11 from 7, comple... 40 9.1
34gb|AC027016.4|AC027016 Homo sapiens chromosome 11, clone RP11-43... 40 9.1
35gb|AC126755.3| Homo sapiens chromosome 16 clone RP11-1212A22, co... 40 9.1
36gb|AC139264.2| Homo sapiens chromosome 16 clone RP11-1353E1, com... 40 9.1
37gb|AC008785.7| Homo sapiens chromosome 16 clone CTD-2036A2, comp... 40 9.1
38gb|AC126763.4| Homo sapiens chromosome 16 clone RP11-1390J18, co... 40 9.1
39gb|AC027275.8| Homo sapiens chromosome 16 clone CTD-2059I8, comp... 40 9.1
40gb|AC136619.3| Homo sapiens chromosome 16 clone RP11-467M13, com... 40 9.1
41gb|AC135593.2| Homo sapiens chromosome 16 clone CTC-531E24, comp... 40 9.1
42gb|AC137803.2| Homo sapiens chromosome 16 clone RP11-72I8, compl... 40 9.1
43gb|AC136431.3| Homo sapiens chromosome 16 clone RP11-148M17, com... 40 9.1
44gb|AC016562.7| Homo sapiens chromosome 5 clone CTC-484A9, comple... 40 9.1
45emb|BX072540.8| Zebrafish DNA sequence from clone CH211-103M6 in... 40 9.1
46gb|AC171018.2| Gallus gallus BAC clone CH261-11F14 from chromoso... 40 9.1
47emb|AL732411.14| Zebrafish DNA sequence from clone XX-51I9 in li... 40 9.1
48emb|CR769763.8| Zebrafish DNA sequence from clone CH211-200N13 i... 40 9.1
49gb|AC140410.3| Mus musculus BAC clone RP23-141J11 from 10, compl... 40 9.1
50emb|AL627405.17| Mouse DNA sequence from clone RP23-183D11 on ch... 40 9.1
51emb|AL772336.5| Mouse DNA sequence from clone RP23-180H12 on chr... 40 9.1 
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0028C22, complete sequence
          Length = 154228

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 601   ttggtctgcttagcagcagcacttcttaacctaaatagtatatttct 647
             |||||||| ||||||| |||||||||||| |||| |||||| |||||
Sbjct: 82882 ttggtctgtttagcagaagcacttcttaagctaagtagtatgtttct 82836
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 601      ttggtctgcttagcagcagcacttcttaacctaaatagtatatttct 647
                |||||||| ||||||| |||||||||||| |||| |||||| |||||
Sbjct: 19755615 ttggtctgtttagcagaagcacttcttaagctaagtagtatgtttct 19755569
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>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0450E05
          Length = 176553

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 601    ttggtctgcttagcagcagcacttcttaacctaaatagtatatttct 647
              |||||||| ||||||| |||||||||||| |||| |||||| |||||
Sbjct: 101301 ttggtctgtttagcagaagcacttcttaagctaagtagtatgtttct 101255
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>dbj|AK106676.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A08, full
            insert sequence
          Length = 2360

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 601  ttggtctgcttagcagcagcacttcttaacctaaatagtatatttct 647
            |||||||| ||||||| |||||||||||| |||| |||||| |||||
Sbjct: 1989 ttggtctgtttagcagaagcacttcttaagctaagtagtatgtttct 1943
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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 220     atctattgcccatctggaaaaca 242
               |||||||||||||||||||||||
Sbjct: 2234599 atctattgcccatctggaaaaca 2234577
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>gb|AC102441.6| Mus musculus chromosome 18, clone RP24-160I12, complete sequence
          Length = 224556

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 626   ttaacctaaatagtatatttc 646
             |||||||||||||||||||||
Sbjct: 53746 ttaacctaaatagtatatttc 53766
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>gb|AC104869.6| Mus musculus chromosome 10, clone RP24-534B24, complete sequence
          Length = 139287

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 16     aagatgggaagaaatatattnagt 39
              |||||||||||||||||||| |||
Sbjct: 124206 aagatgggaagaaatatattaagt 124229
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>emb|BX293996.16| Zebrafish DNA sequence from clone DKEY-38J20 in linkage group 1, complete
              sequence
          Length = 237723

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    atacagtattacagtacagta 212
              |||||||||||||||||||||
Sbjct: 136491 atacagtattacagtacagta 136471
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>gb|AC159475.9| Mus musculus 10 BAC RP23-55G19 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205117

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    aagatgggaagaaatatattnagt 39
             |||||||||||||||||||| |||
Sbjct: 67503 aagatgggaagaaatatattaagt 67480
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 196     agtattacagtacagtacgac 216
               |||||||||||||||||||||
Sbjct: 2645152 agtattacagtacagtacgac 2645172
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>ref|XM_451296.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A06644g predicted mRNA
          Length = 1422

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 519  attcttggtggtggatctca 538
            ||||||||||||||||||||
Sbjct: 1108 attcttggtggtggatctca 1127
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>gb|AC164428.4| Mus musculus BAC clone RP24-150D18 from chromosome 1, complete sequence
          Length = 170692

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   atgcagagctcggcactgtg 327
             ||||||||||||||||||||
Sbjct: 61365 atgcagagctcggcactgtg 61384
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>gb|AC153865.3| Mus musculus  BAC RP23-373P9 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 180703

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 544    gtcattagcaatcactttgg 563
              ||||||||||||||||||||
Sbjct: 117667 gtcattagcaatcactttgg 117648
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>emb|CR762406.10| Zebrafish DNA sequence from clone DKEY-13D23 in linkage group 1,
             complete sequence
          Length = 144021

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   cagaagtatgcaaaaagact 415
             ||||||||||||||||||||
Sbjct: 74319 cagaagtatgcaaaaagact 74338
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>emb|BX927362.10| Zebrafish DNA sequence from clone CH211-170N20 in linkage group 6,
             complete sequence
          Length = 131893

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gcaatacagaaaatatataa 128
             ||||||||||||||||||||
Sbjct: 51730 gcaatacagaaaatatataa 51749
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>gb|AC002492.1|HUAC002492 Human Chromosome 16 BAC clone CIT987SK-A-256A9, complete sequence
          Length = 179245

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   tggtggtggatctcaaccct 543
             ||||||||||||||||||||
Sbjct: 44533 tggtggtggatctcaaccct 44514
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>gb|AC121861.3| Mus musculus BAC clone RP24-108P23 from chromosome 1, complete sequence
          Length = 185558

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   atgcagagctcggcactgtg 327
             ||||||||||||||||||||
Sbjct: 46242 atgcagagctcggcactgtg 46223
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>emb|BX511042.2| Human DNA sequence from clone RP11-300L20 on chromosome 1 Contains part
             of the gene for putative G-protein coupled receptor SH120,
             complete sequence
          Length = 47106

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   aataatcctgatatgtttgt 293
             ||||||||||||||||||||
Sbjct: 23050 aataatcctgatatgtttgt 23069
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>emb|AL158837.14| Human DNA sequence from clone RP11-102C16 on chromosome 1 Contains the
             gene for a novel protein (FLJ14904, FLJ29032,
             DKFZp434L0217), a novel gene, the GPA33 gene for
             glycoprotein A33 (transmembrane), the gene for novel
             protein (FLJ37495) and three CpG islands, complete
             sequence
          Length = 148849

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    caaccaaaccttgcaacatc 71
             ||||||||||||||||||||
Sbjct: 86700 caaccaaaccttgcaacatc 86719
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>gb|U94409.1|MAU94409 Microcystis aeruginosa strain UV025 plasmid pMa025, complete sequence
          Length = 8018

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 127  aagcagcgagctggatcctg 146
            ||||||||||||||||||||
Sbjct: 3398 aagcagcgagctggatcctg 3379
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>emb|AL033522.1|HS451B21 Human DNA sequence from clone RP3-451B21 on chromosome 6q24 Contains the
              HSPC228 gene for hypothetical protein HSPC228 and  a novel
              gene, complete sequence
          Length = 135162

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    atacagaaaatatataagca 131
              ||||||||||||||||||||
Sbjct: 115216 atacagaaaatatataagca 115197
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 519    attcttggtggtggatctca 538
              ||||||||||||||||||||
Sbjct: 602634 attcttggtggtggatctca 602653
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>emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 9/11
          Length = 344249

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    taagctatgcatcattcttg 525
              ||||||||||||||||||||
Sbjct: 236480 taagctatgcatcattcttg 236499
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>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence
          Length = 127914

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     tcaccaaccaaaccttgcaa 67
              ||||||||||||||||||||
Sbjct: 127230 tcaccaaccaaaccttgcaa 127211
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>emb|BX897714.6| Zebrafish DNA sequence from clone DKEY-218L23 in linkage group 25,
              complete sequence
          Length = 184435

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    tacagtattacagtacagta 212
              ||||||||||||||||||||
Sbjct: 160567 tacagtattacagtacagta 160548
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>emb|BX908775.18| Zebrafish DNA sequence from clone CH211-255L12 in linkage group 18,
             complete sequence
          Length = 82190

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gcaatacagaaaatatataa 128
             ||||||||||||||||||||
Sbjct: 50002 gcaatacagaaaatatataa 49983
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>gb|AC112481.2| Homo sapiens 12 BAC RP11-20L19 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 116996

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 541  cctgtcattagcaatcactt 560
            ||||||||||||||||||||
Sbjct: 9149 cctgtcattagcaatcactt 9168
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>gb|AY026260.1|Y026259S02 Homo sapiens single stranded DNA binding protein-2 (SSDP2) gene,
           exon 2
          Length = 360

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 gcaatacagaaaatatataa 128
           ||||||||||||||||||||
Sbjct: 326 gcaatacagaaaatatataa 307
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>dbj|AK001354.1| Homo sapiens cDNA FLJ10492 fis, clone NT2RP2000270
          Length = 2700

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 274  aataatcctgatatgtttgt 293
            ||||||||||||||||||||
Sbjct: 1388 aataatcctgatatgtttgt 1369
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>gb|AC011921.14| Homo sapiens chromosome 17, clone RP11-15E18, complete sequence
          Length = 153922

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 365   caaaaagcatttggtggcattgag 388
             |||||||||||||||| |||||||
Sbjct: 53872 caaaaagcatttggtgacattgag 53849
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>gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162004

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 641   tatttcttgtaggcacaccc 660
             ||||||||||||||||||||
Sbjct: 18874 tatttcttgtaggcacaccc 18855
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>gb|AC098866.3| Homo sapiens BAC clone RP11-404F3 from 4, complete sequence
          Length = 144290

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    aagatgggaagaaatatatt 35
             ||||||||||||||||||||
Sbjct: 90645 aagatgggaagaaatatatt 90626
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>gb|AC073057.6| Homo sapiens BAC clone RP11-114G11 from 7, complete sequence
          Length = 178105

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   ttaagctatgcatcattctt 524
             ||||||||||||||||||||
Sbjct: 18163 ttaagctatgcatcattctt 18144
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>gb|AC027016.4|AC027016 Homo sapiens chromosome 11, clone RP11-439M19, complete sequence
          Length = 165843

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 175   aaatcacaaccagccatatacagt 198
             ||||||||||||||||||| ||||
Sbjct: 66079 aaatcacaaccagccatatgcagt 66102
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>gb|AC126755.3| Homo sapiens chromosome 16 clone RP11-1212A22, complete sequence
          Length = 223432

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 524    tggtggtggatctcaaccct 543
              ||||||||||||||||||||
Sbjct: 210858 tggtggtggatctcaaccct 210839
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>gb|AC139264.2| Homo sapiens chromosome 16 clone RP11-1353E1, complete sequence
          Length = 231174

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 524    tggtggtggatctcaaccct 543
              ||||||||||||||||||||
Sbjct: 183755 tggtggtggatctcaaccct 183736
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>gb|AC008785.7| Homo sapiens chromosome 16 clone CTD-2036A2, complete sequence
          Length = 185030

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 524    tggtggtggatctcaaccct 543
              ||||||||||||||||||||
Sbjct: 118625 tggtggtggatctcaaccct 118644
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>gb|AC126763.4| Homo sapiens chromosome 16 clone RP11-1390J18, complete sequence
          Length = 187721

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   tggtggtggatctcaaccct 543
             ||||||||||||||||||||
Sbjct: 69721 tggtggtggatctcaaccct 69702
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>gb|AC027275.8| Homo sapiens chromosome 16 clone CTD-2059I8, complete sequence
          Length = 109423

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   tggtggtggatctcaaccct 543
             ||||||||||||||||||||
Sbjct: 86390 tggtggtggatctcaaccct 86371
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>gb|AC136619.3| Homo sapiens chromosome 16 clone RP11-467M13, complete sequence
          Length = 163846

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 524    tggtggtggatctcaaccct 543
              ||||||||||||||||||||
Sbjct: 100529 tggtggtggatctcaaccct 100510
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>gb|AC135593.2| Homo sapiens chromosome 16 clone CTC-531E24, complete sequence
          Length = 127925

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 524  tggtggtggatctcaaccct 543
            ||||||||||||||||||||
Sbjct: 7104 tggtggtggatctcaaccct 7123
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>gb|AC137803.2| Homo sapiens chromosome 16 clone RP11-72I8, complete sequence
          Length = 154376

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 524    tggtggtggatctcaaccct 543
              ||||||||||||||||||||
Sbjct: 137397 tggtggtggatctcaaccct 137378
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>gb|AC136431.3| Homo sapiens chromosome 16 clone RP11-148M17, complete sequence
          Length = 168721

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 524    tggtggtggatctcaaccct 543
              ||||||||||||||||||||
Sbjct: 162293 tggtggtggatctcaaccct 162312
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>gb|AC016562.7| Homo sapiens chromosome 5 clone CTC-484A9, complete sequence
          Length = 185774

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gcaatacagaaaatatataa 128
             ||||||||||||||||||||
Sbjct: 34957 gcaatacagaaaatatataa 34976
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>emb|BX072540.8| Zebrafish DNA sequence from clone CH211-103M6 in linkage group 18,
             complete sequence
          Length = 178664

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gcaatacagaaaatatataa 128
             ||||||||||||||||||||
Sbjct: 83035 gcaatacagaaaatatataa 83054
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>gb|AC171018.2| Gallus gallus BAC clone CH261-11F14 from chromosome ul, complete sequence
          Length = 216886

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 96     ccacagatggcaggcaatacagaa 119
              ||||||| ||||||||||||||||
Sbjct: 126401 ccacagaaggcaggcaatacagaa 126424
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>emb|AL732411.14| Zebrafish DNA sequence from clone XX-51I9 in linkage group 9, complete
             sequence
          Length = 64799

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gcaatacagaaaatatataa 128
             ||||||||||||||||||||
Sbjct: 19225 gcaatacagaaaatatataa 19244
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>emb|CR769763.8| Zebrafish DNA sequence from clone CH211-200N13 in linkage group 11,
             complete sequence
          Length = 102709

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gcaatacagaaaatatataa 128
             ||||||||||||||||||||
Sbjct: 27543 gcaatacagaaaatatataa 27524
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>gb|AC140410.3| Mus musculus BAC clone RP23-141J11 from 10, complete sequence
          Length = 205197

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 546   cattagcaatcactttgggg 565
             ||||||||||||||||||||
Sbjct: 42248 cattagcaatcactttgggg 42267
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>emb|AL627405.17| Mouse DNA sequence from clone RP23-183D11 on chromosome 4, complete
             sequence
          Length = 193847

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   aagcagcgagctggatcctg 146
             ||||||||||||||||||||
Sbjct: 94992 aagcagcgagctggatcctg 95011
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>emb|AL772336.5| Mouse DNA sequence from clone RP23-180H12 on chromosome 4, complete
              sequence
          Length = 154034

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    tcacaaccagccatatacag 197
              ||||||||||||||||||||
Sbjct: 137026 tcacaaccagccatatacag 137007


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,150,192
Number of Sequences: 3902068
Number of extensions: 6150192
Number of successful extensions: 112609
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112435
Number of HSP's gapped (non-prelim): 174
length of query: 665
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 642
effective length of database: 17,143,297,704
effective search space: 11005997125968
effective search space used: 11005997125968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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