Clone Information

BLAST Search Result

Clone Name	rbags25e05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AB042240.3\| Triticum aestivum chloroplast DNA, complete genome	920	0.0
2	gb\|AE009947.2\| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	890	0.0
3	dbj\|AP006714.1\| Saccharum officinarum chloroplast DNA, complete ...	890	0.0
4	ref\|XM_481018.1\| Oryza sativa (japonica cultivar-group), mRNA	785	0.0
5	ref\|XM_481019.1\| Oryza sativa (japonica cultivar-group), mRNA	785	0.0
6	ref\|XM_507181.1\| PREDICTED Oryza sativa (japonica cultivar-group...	785	0.0
7	gb\|AY522330.1\| Oryza sativa (japonica cultivar-group) cultivar N...	785	0.0
8	gb\|AY522331.1\| Oryza sativa (japonica cultivar-group) isolate PA...	785	0.0
9	gb\|AY522329.1\| Oryza sativa (indica cultivar-group) isolate 93-1...	785	0.0
10	gb\|AC136521.2\| Oryza sativa (japonica cultivar-group) chromosome...	785	0.0
11	gb\|AC134345.2\| Oryza sativa (jpaonica cultivar-group) chromosome...	785	0.0
12	emb\|X15901.1\|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	785	0.0
13	emb\|BX569685.1\|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	785	0.0
14	gb\|AC122148.1\| Oryza sativa (japonica cultivar-group) chromosome...	785	0.0
15	gb\|AC099402.2\| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	785	0.0
16	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	785	0.0
17	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	785	0.0
18	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	785	0.0
19	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	785	0.0
20	dbj\|AP005161.3\| Oryza sativa (japonica cultivar-group) genomic D...	785	0.0
21	dbj\|AK105308.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	785	0.0
22	dbj\|AK071967.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	785	0.0
23	gb\|AE016959.3\| Oryza sativa (japonica cultivar-group) chromosome...	785	0.0
24	dbj\|AP008218.1\| Oryza sativa (japonica cultivar-group) genomic D...	777	0.0
25	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	777	0.0
26	dbj\|AP003280.2\| Oryza sativa (japonica cultivar-group) genomic D...	777	0.0
27	dbj\|AK063122.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	777	0.0
28	gb\|DP000011.1\| Oryza sativa (japonica cultivar-group) chromosome...	777	0.0
29	emb\|AL954853.5\|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb...	777	0.0
30	dbj\|AP006728.1\| Oryza nivara chloroplast DNA, complete genome	777	0.0
31	ref\|XM_479424.1\| Oryza sativa (japonica cultivar-group), mRNA	769	0.0
32	ref\|XM_479423.1\| Oryza sativa (japonica cultivar-group), mRNA	769	0.0
33	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
34	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
35	dbj\|AP005452.5\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
36	dbj\|AP003825.3\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
37	dbj\|AP004236.3\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
38	dbj\|AP003623.3\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
39	emb\|X86563.2\|ZMA86563 Zea mays complete chloroplast genome	753	0.0
40	emb\|X06734.1\|CHZMRP14 Maize chloroplast genes for ribosomal prot...	753	0.0
41	gb\|AY928077.1\| Zea mays cultivar B73 chloroplast, complete genome	753	0.0
42	ref\|XM_450630.1\| Oryza sativa (japonica cultivar-group), mRNA	745	0.0
43	ref\|XM_450631.1\| Oryza sativa (japonica cultivar-group), mRNA	745	0.0
44	ref\|XM_506652.1\| PREDICTED Oryza sativa (japonica cultivar-group...	745	0.0
45	dbj\|AP008215.1\| Oryza sativa (japonica cultivar-group) genomic D...	745	0.0
46	dbj\|AP005675.3\| Oryza sativa (japonica cultivar-group) genomic D...	745	0.0
47	dbj\|AP005422.3\| Oryza sativa (japonica cultivar-group) genomic D...	745	0.0
48	gb\|AC120991.3\| Oryza sativa (japonica cultivar-group) chromosome...	737	0.0
49	gb\|AC104708.2\| Oryza sativa (japonica cultivar-group) chromosome...	737	0.0
50	ref\|NM_190859.1\| Oryza sativa (japonica cultivar-group), predic...	618	e-174
51	gb\|AC145383.3\| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genom...	539	e-150
52	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	539	e-150
53	emb\|AL732379.5\|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0...	539	e-150
54	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	539	e-150
55	gb\|AC084748.11\| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno...	462	e-127
56	gb\|AC084320.10\| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno...	462	e-127
57	gb\|DQ069425.1\| Typha latifolia ribosomal protein L14 (rpl14) gen...	402	e-109
58	gb\|DQ069426.1\| Yucca schidigera ribosomal protein L14 (rpl14) ge...	387	e-104
59	emb\|AL731738.6\|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa...	365	1e-97
60	gb\|AC093492.3\| Oryza sativa (japonica cultivar-group) chromosome...	351	2e-93
61	gb\|AC093493.2\| Oryza sativa (japonica cultivar-group) chromosome...	351	2e-93
62	emb\|AJ428413.1\|CFE428413 Calycanthus fertilis var. ferax complet...	349	7e-93
63	gb\|AY916449.1\| Phalaenopsis aphrodite subsp. formosana plastid, ...	323	4e-85
64	emb\|AJ879453.1\| Acorus calamus chloroplast, complete genome	319	6e-84
65	gb\|DQ347958.1\| Solanum bulbocastanum cultivar PT29 chloroplast, ...	307	2e-80
66	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	305	1e-79
67	dbj\|AP006523.2\| Oryza sativa (japonica cultivar-group) genomic D...	305	1e-79
68	gb\|DQ069421.1\| Acorus americanus ribosomal protein L14 (rpl14) g...	299	6e-78
69	gb\|DQ383815.1\| Helianthus annuus cultivar line HA383 chloroplast...	299	6e-78
70	gb\|DQ386163.1\| Solanum tuberosum cultivar Desiree chloroplast, c...	299	6e-78
71	gb\|DQ231562.1\| Solanum tuberosum chloroplast, complete genome	299	6e-78
72	gb\|DQ069423.1\| Nuphar advena ribosomal protein L14 (rpl14) gene,...	291	1e-75
73	gb\|AY582139.1\| Panax ginseng chloroplast, complete genome	291	1e-75
74	emb\|AM087200.2\| Lycopersicon esculentum complete chloroplast genome	291	1e-75
75	gb\|DQ347959.1\| Lycopersicon esculentum cultivar LA3023 chloropla...	291	1e-75
76	gb\|DQ424856.1\| Vitis vinifera cultivar Maxxa chloroplast, comple...	289	6e-75
77	gb\|DQ383816.1\| Lactuca sativa cultivar Salinas chloroplast, comp...	287	2e-74
78	emb\|AJ627251.1\| Nymphaea alba chloroplast, complete genome	287	2e-74
79	dbj\|AP007232.1\| Lactuca sativa chloroplast DNA, complete genome	287	2e-74
80	emb\|AJ970307.1\| Cucumis sativus chloroplast complete genome	285	9e-74
81	gb\|AF441853.1\|AF441853 Cucumis sativus RBL1 mRNA, complete cds; ...	285	9e-74
82	gb\|DQ119058.1\| Cucumis sativus cultivar Baekmibaekdadagi plastid...	285	9e-74
83	dbj\|AB240139.1\| Nicotiana tomentosiformis chloroplast DNA, compl...	283	4e-73
84	emb\|Z00044.2\|CHNTXX Nicotiana tabacum chloroplast genome DNA	276	9e-71
85	emb\|AJ400848.1\|SOL400848 Spinacia oleracea complete chloroplast ...	276	9e-71
86	emb\|AJ316582.1\|ABE316582 Atropa belladonna complete chloroplast ...	276	9e-71
87	dbj\|AB237912.1\| Nicotiana sylvestris chloroplast DNA, complete s...	276	9e-71
88	gb\|DQ345959.1\| Gossypium hirsutum cultivar coker 310 FR chloropl...	274	3e-70
89	emb\|X13336.1\|CHSORP Spinacia oleracea plastid genes rps3, rps19,...	254	3e-64
90	dbj\|AP000423.1\| Arabidopsis thaliana chloroplast genomic DNA, co...	250	5e-63
91	dbj\|AP004556.3\| Oryza sativa (japonica cultivar-group) genomic D...	242	1e-60
92	dbj\|AP005415.2\| Oryza sativa (japonica cultivar-group) genomic D...	242	1e-60
93	gb\|DQ069424.1\| Ranunculus macranthus ribosomal protein L14 (rpl1...	238	2e-59
94	emb\|AJ506156.2\|ATR506156 Amborella trichopoda chloroplast genomi...	234	3e-58
95	emb\|AJ271079.2\|OEL271079 Oenothera elata subsp. hookeri chloropl...	234	3e-58
96	gb\|AY780259.1\| Eucalyptus globulus subsp. globulus chloroplast, ...	218	2e-53
97	gb\|DQ231548.1\| Brassica rapa subsp. pekinensis chloroplast sequence	216	7e-53
98	dbj\|AP002983.1\| Lotus japonicus chloroplast DNA, complete genome	212	1e-51
99	dbj\|AP008982.1\| Triticum aestivum mitochondrial DNA, complete ge...	210	4e-51
100	gb\|M15176.1\|MZECPPG Zea mays chloroplast Eco x DNA	194	3e-46
101	dbj\|AP006174.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	6e-44
102	dbj\|AP006067.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	6e-44
103	dbj\|AP005389.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	6e-44
104	dbj\|AP005298.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	6e-44
105	gb\|DQ167399.1\| Oryza sativa (indica cultivar-group) isolate 93-1...	170	4e-39
106	gb\|DQ167807.1\| Oryza sativa (japonica cultivar-group) isolate PA...	170	4e-39
107	gb\|DQ167400.1\| Oryza sativa (japonica cultivar-group) cultivar N...	170	4e-39
108	dbj\|BA000029.3\| Oryza sativa (japonica cultivar-group) mitochond...	170	4e-39
109	gb\|AC137998.2\| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genom...	163	9e-37
110	gb\|AF229187.1\|AF229187 Oryza sativa subsp. japonica BAC clone nb...	155	2e-34
111	dbj\|D13105.1\|RICMT09 Oryza sativa (japonica cultivar-group) mito...	155	2e-34
112	dbj\|AP005707.3\| Oryza sativa (japonica cultivar-group) genomic D...	153	9e-34
113	dbj\|AP005683.2\| Oryza sativa (japonica cultivar-group) genomic D...	153	9e-34
114	dbj\|AP003768.3\| Oryza sativa (japonica cultivar-group) genomic D...	145	2e-31
115	gb\|AF536225.1\| Vigna angularis chloroplast S10B operon, partial ...	141	3e-30
116	dbj\|AP003861.2\| Oryza sativa (japonica cultivar-group) genomic D...	141	3e-30
117	gb\|AC093544.8\| Medicago truncatula chloroplast, complete genome,...	139	1e-29
118	gb\|DQ317523.1\| Glycine max cultivar PI 437654 chloroplast, compl...	125	2e-25
119	dbj\|D17510.1\|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	123	8e-25
120	emb\|X68048.1\|CHPVHISG Phaseolus vulgaris chloroplast DNA for tRN...	117	5e-23
121	gb\|AC133862.6\| Medicago truncatula clone mth2-30d7, complete seq...	115	2e-22
122	gb\|AC124957.18\| Medicago truncatula clone mth2-15k14, complete s...	115	2e-22
123	gb\|AY228468.1\| Pinus Koraiensis chloroplast, complete genome	115	2e-22
124	gb\|M60180.1\|OBECPRPB O.ammophila ribosomal protein L14 and S8 (r...	98	4e-17
125	gb\|DQ069419.1\| Typha latifolia ribosomal protein L16 (rpl16) gen...	94	7e-16
126	dbj\|AB077366.1\| Iris bungei plastid DNA, intron region	94	7e-16
127	dbj\|AB077365.1\| Iris dichotoma plastid DNA, intron region	94	7e-16
128	gb\|AY958086.1\| Zygnema circumcarinatum chloroplast, complete genome	92	3e-15
129	emb\|X04465.1\|CHMPXX Marchantia polymorpha chloroplast genome DNA	88	4e-14
130	gb\|DQ069420.1\| Yucca schidigera ribosomal protein L16 (rpl16) ge...	86	2e-13
131	emb\|AL663020.4\|OSJN00220 Oryza sativa genomic DNA, chromosome 4,...	86	2e-13
132	dbj\|AP005672.1\| Physcomitrella patens subsp. patens chloroplast ...	86	2e-13
133	dbj\|AB087469.1\| Anthoceros formosae chloroplast rpl14 mRNA for r...	82	3e-12
134	dbj\|AB086179.1\| Anthoceros formosae chloroplast DNA, complete ge...	82	3e-12
135	gb\|M60179.1\|OBECPRPA O.ammophila ribosomal protein L14 and L16 (...	82	3e-12
136	gb\|AC135498.3\| Oryza sativa (japonica cultivar-group) chromosome...	80	1e-11
137	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	80	1e-11
138	gb\|AY660566.1\| Huperzia lucidula chloroplast, complete genome	80	1e-11
139	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	80	1e-11
140	emb\|AL662985.3\|OSJN00189 Oryza sativa genomic DNA, chromosome 4,...	78	4e-11
141	dbj\|AP004038.2\| Oryza sativa (japonica cultivar-group) genomic D...	76	2e-10
142	dbj\|AP004638.1\| Psilotum nudum chloroplast DNA, complete genome	74	6e-10
143	dbj\|AB077439.1\| Sophora alopecuroides plastid DNA, intron region	72	3e-09
144	gb\|DQ069416.1\| Ginkgo biloba ribosomal protein L16 (rpl16) gene,...	70	1e-08
145	dbj\|AP003418.2\| Oryza sativa (japonica cultivar-group) genomic D...	70	1e-08
146	gb\|DQ069422.1\| Ginkgo biloba ribosomal protein L14 (rpl14) gene,...	68	4e-08
147	gb\|M80799.1\|VIRCPRPL Vigna unguiculata chloroplast ribosomal pro...	66	2e-07
148	gb\|DQ069418.1\| Ranunculus macranthus ribosomal protein L16 (rpl1...	64	6e-07
149	dbj\|AB077337.1\| Saussurea involucrata plastid DNA, intron region	64	6e-07
150	emb\|X03834.1\|CHSOL16 Spirodela oligorhiza chloroplast gene for r...	64	6e-07
151	gb\|DQ396875.1\| Scenedesmus obliquus strain UTEX 393 chloroplast,...	62	2e-06
152	gb\|DQ069415.1\| Acorus americanus ribosomal protein L16 (rpl16) g...	62	2e-06
153	dbj\|AP004159.3\| Oryza sativa (japonica cultivar-group) genomic D...	62	2e-06
154	dbj\|AB096925.1\| Papaver somniferum chloroplast rpl16 gene for ri...	62	2e-06
155	dbj\|AB096924.1\| Papaver setigerum chloroplast rpl16 gene for rib...	62	2e-06
156	dbj\|AB096923.1\| Papaver rhoeas chloroplast rpl16 gene for riboso...	62	2e-06
157	dbj\|AB096922.1\| Papaver pseudo-orientale chloroplast rpl16 gene ...	62	2e-06
158	dbj\|AB096921.1\| Papaver orientale chloroplast rpl16 gene for rib...	62	2e-06
159	dbj\|AB096920.1\| Papaver bracteatum chloroplast rpl16 gene for ri...	62	2e-06
160	gb\|DQ069417.1\| Nuphar advena ribosomal protein L16 (rpl16) gene,...	60	1e-05
161	gb\|DQ291132.1\| Oltmannsiellopsis viridis chloroplast, complete g...	58	4e-05
162	dbj\|AB077335.1\| Allium altaicum plastid DNA, intron region	58	4e-05
163	gb\|AY178864.1\| Adiantum capillus-veneris chloroplast, complete g...	56	1e-04
164	tpg\|BK000554.2\| TPA: TPA_inf: Chlamydomonas reinhardtii chloropl...	56	1e-04
165	emb\|X14062.1\|CHCRL14 Chlamydomonas reinhardtii plasti gene for r...	56	1e-04
166	dbj\|AP003281.3\| Oryza sativa (japonica cultivar-group) genomic D...	54	6e-04
167	gb\|AC011806.1\|AC011806 Genomic Sequence For Oryza sativa Clone 1...	54	6e-04
168	gb\|M30487.1\|CPACYRP Cyanophora paradoxa ribosomal protein l22 (r...	54	6e-04
169	dbj\|AP003236.3\| Oryza sativa (japonica cultivar-group) genomic D...	54	6e-04
170	emb\|AL928780.5\|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa...	54	6e-04
171	gb\|U30821.1\|CPU30821 Cyanophora paradoxa cyanelle, complete genome	54	6e-04
172	gb\|AF050665.1\|AF050665 Spirogyra maxima tRNA-Ile gene, complete ...	52	0.002
173	gb\|CP000117.1\| Anabaena variabilis ATCC 29413 chromosome, comple...	50	0.009
174	dbj\|BA000019.2\| Nostoc sp. PCC 7120 DNA, complete genome	50	0.009
175	gb\|AY958085.1\| Staurastrum punctulatum chloroplast, complete genome	48	0.037
176	gb\|AC135558.6\| Oryza sativa (japonica cultivar-group) chromosome...	48	0.037
177	dbj\|AB077333.1\| Ferula feruloides plastid DNA, intron region	48	0.037
178	ref\|NM_128441.3\| Arabidopsis thaliana structural constituent of ...	46	0.14
179	emb\|AL359081.10\| Human DNA sequence from clone RP11-541F9 on chr...	46	0.14
180	gb\|AC005727.3\| Arabidopsis thaliana chromosome 2 clone F8N16 map...	46	0.14
181	gb\|AY219111.2\| Arabidopsis thaliana hypothetical protein (At2g28...	46	0.14
182	dbj\|AP000606.1\| Arabidopsis thaliana genomic DNA, chromosome 3, ...	46	0.14
183	dbj\|AB028608.1\| Arabidopsis thaliana genomic DNA, chromosome 3, ...	46	0.14
184	gb\|AC157473.1\| Medicago truncatula chromosome 7 BAC clone mte1-1...	46	0.14
185	gb\|AC132335.3\| Mus musculus BAC clone RP24-230C24 from chromosom...	44	0.57
186	dbj\|AB025638.1\| Arabidopsis thaliana genomic DNA, chromosome 5, ...	44	0.57
187	dbj\|AB077440.1\| Incarvillea potaninii plastid DNA, intron region	44	0.57
188	dbj\|AB077334.1\| Zygophyllum pterocarpum plastid DNA, intron region	44	0.57
189	gb\|AC166165.3\| Mus musculus BAC clone RP23-381I17 from chromosom...	44	0.57
190	gb\|CP000109.1\| Thiomicrospira crunogena XCL-2, complete genome	42	2.3
191	emb\|CT009479.4\| M.truncatula DNA sequence from clone MTH2-164E3 ...	42	2.3
192	emb\|CR753838.10\| Zebrafish DNA sequence from clone DKEY-189H5 in...	42	2.3
193	emb\|AL606489.26\| Human DNA sequence from clone RP11-739N20 on ch...	42	2.3
194	ref\|XM_503361.1\| Yarrowia lipolytica CLIB122, YALI0E00154g predi...	42	2.3
195	emb\|AL359821.11\| Human DNA sequence from clone RP11-175G14 on ch...	42	2.3
196	emb\|AL355355.25\| Human DNA sequence from clone RP11-730A19 on ch...	42	2.3
197	emb\|AL122003.17\|HSJ659I19 Human DNA sequence from clone RP4-659I...	42	2.3
198	emb\|AL162752.2\|NMA1Z2491 Neisseria meningitidis serogroup A stra...	42	2.3
199	gb\|AC084817.5\| Oryza sativa (japonica cultivar-group) chromosome...	42	2.3
200	gb\|AY835431.1\| Pseudendoclonium akinetum chloroplast, complete g...	42	2.3
201	gb\|AC025821.7\| Homo sapiens BAC clone RP11-472F4 from 4, complet...	42	2.3
202	dbj\|AK034773.1\| Mus musculus 12 days embryo embryonic body betwe...	42	2.3
203	gb\|AE002098.2\| Neisseria meningitidis MC58, complete genome	42	2.3
204	dbj\|AB199893.1\| Angelica acutiloba var. iwatensis chloroplast rp...	42	2.3
205	dbj\|AB199892.1\| Angelica acutiloba var. sugiyamae chloroplast rp...	42	2.3
206	dbj\|AB199891.1\| Angelica acutiloba chloroplast rpl16 gene for ri...	42	2.3
207	gb\|AC109358.3\| Homo sapiens BAC clone RP11-648D16 from 2, comple...	42	2.3
208	gb\|AC073885.5\| Homo sapiens BAC clone RP11-70L16 from 2, complet...	42	2.3
209	gb\|AF283525.1\|AF283519S7 Homo sapiens FIP2 gene, exons 11, 12 an...	42	2.3
210	dbj\|AK120872.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.3
211	gb\|AE004969.1\| Neisseria gonorrhoeae FA 1090, complete genome	42	2.3
212	emb\|BX322606.6\| Zebrafish DNA sequence from clone DKEY-40F12, co...	42	2.3
213	gb\|U38804.1\|PPU38804 Porphyra purpurea chloroplast, complete genome	42	2.3
214	emb\|CR382131.1\| Yarrowia lipolytica chromosome E of strain CLIB ...	42	2.3
215	gb\|AC165159.2\| Mus musculus BAC clone RP23-234N1 from chromosome...	42	2.3
216	ref\|XM_639569.1\| Dictyostelium discoideum histidine kinase (DDB0...	40	8.9
217	ref\|XM_639498.1\| Dictyostelium discoideum histidine kinase DhkI ...	40	8.9
218	ref\|XM_634860.1\| Dictyostelium discoideum hypothetical protein (...	40	8.9
219	gb\|AC167973.4\| Mus musculus BAC clone RP23-453B4 from chromosome...	40	8.9
220	gb\|AC153856.23\| Mus musculus 10 BAC RP23-468J15 (Roswell Park Ca...	40	8.9
221	gb\|AY681321.1\| Agelena orientalis toxin-like structure Agel_24 p...	40	8.9
222	gb\|CP000262.1\| Streptococcus pyogenes MGAS10750, complete genome	40	8.9
223	gb\|DQ415920.1\| Cleome spinosa clone BAC Cs3, complete sequence	40	8.9
224	emb\|CT025560.9\| Mouse DNA sequence from clone RP23-432N22 on chr...	40	8.9
225	emb\|CR450788.7\| Zebrafish DNA sequence from clone DKEY-15P23 in ...	40	8.9
226	emb\|BX005436.12\| Zebrafish DNA sequence from clone DKEY-9A8 in l...	40	8.9
227	emb\|Z76735.1\|HS246O8 Human DNA sequence from clone RP1-246O8 on ...	40	8.9
228	emb\|AL603882.13\| Human DNA sequence from clone RP11-630I5 on chr...	40	8.9
229	gb\|AC163342.2\| Mus musculus BAC clone RP24-115M13 from chromosom...	40	8.9
230	emb\|BX572101.1\| Prochlorococcus marinus MIT9313 complete genome;...	40	8.9
231	gb\|AC159379.14\| Mus musculus 10 BAC RP23-210F14 (Roswell Park Ca...	40	8.9
232	emb\|AL627283.1\| Salmonella enterica serovar Typhi (Salmonella ty...	40	8.9
233	gb\|AC156991.9\| Mus musculus chromosome 8, clone RP23-297F23, com...	40	8.9
234	emb\|BX510930.15\| Zebrafish DNA sequence from clone DKEY-91L18 in...	40	8.9
235	gb\|CP000268.1\| Rhodoferax ferrireducens DSM 15236 plasmid1, comp...	40	8.9
236	gb\|AC108100.2\| Homo sapiens chromosome 5 clone RP11-125A21, comp...	40	8.9
237	gb\|AC010406.7\| Homo sapiens chromosome 5 clone CTD-2154H6, compl...	40	8.9
238	emb\|BX664600.7\| Zebrafish DNA sequence from clone CH211-112M13, ...	40	8.9
239	gb\|AC159542.8\| Mus musculus 10 BAC RP23-137B10 (Roswell Park Can...	40	8.9
240	gb\|AC136037.2\| Rattus norvegicus X BAC CH230-378N18 (Children's ...	40	8.9
241	gb\|AC087254.2\| Danio rerio clone 91J1, complete sequence	40	8.9
242	gb\|AF362371.1\|AF362371 Dictyostelium discoideum histidine kinase...	40	8.9
243	gb\|AC103567.2\| Caenorhabditis elegans cosmid Y51F10, complete se...	40	8.9
244	gb\|AF166114.1\|AF166114 Mesostigma viride chloroplast DNA, comple...	40	8.9
245	gb\|AC116330.2\| Dictyostelium discoideum chromosome 2 map 3191214...	40	8.9
246	gb\|AC010423.8\| Homo sapiens chromosome 5 clone CTD-2193G5, compl...	40	8.9
247	gb\|AE016754.1\| Mus musculus chromosome 10 high-growth region, se...	40	8.9
248	emb\|BX511028.13\| Zebrafish DNA sequence from clone DKEY-161N17 i...	40	8.9
249	emb\|CT010464.7\| M.truncatula DNA sequence from clone MTH2-95O22 ...	40	8.9
250	gb\|AE014613.1\| Salmonella enterica subsp. enterica serovar Typhi...	40	8.9
251	gb\|AF041468.1\| Guillardia theta complete plastid genome	40	8.9
252	gb\|AE017220.1\| Salmonella enterica subsp. enterica serovar Chole...	40	8.9
253	gb\|AE016830.1\| Enterococcus faecalis V583, complete genome	40	8.9
254	gb\|AC154414.2\| Mus musculus BAC clone RP24-231D24 from 16, compl...	40	8.9
255	gb\|AC158600.17\| Mus musculus 10 BAC RP24-211K19 (Roswell Park Ca...	40	8.9
256	emb\|CR385050.10\| Zebrafish DNA sequence from clone DKEY-22I16 in...	40	8.9
257	gb\|AF494278.1\| Chaetosphaeridium globosum chloroplast, complete ...	40	8.9

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  920 bits (464), Expect = 0.0
 Identities = 489/496 (98%), Gaps = 1/496 (0%)
 Strand = Plus / Plus

                                                                         
Query: 14    aatctactaatattaattctttgatctaaatttcgcctactagtatttataatacttcag 73
             |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 76989 aatctactaa-attaattctttgatctcaatttcgcctactagtatttataatacttcag 77047

                                                                         
Query: 74    gagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaa 133
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 77048 gagctaatgaaactattttggtaaaattcaatcctctcaattcctcggcaatcgcgccaa 77107

                                                                         
Query: 134   aaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcat 193
             ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 77108 aaactcgagttccttttggattgcctttttgatcaattataaccgcagcattgtcatcat 77167

                                                                         
Query: 194   agcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctc 253
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 77168 agcggattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagctc 77227

                                                                         
Query: 254   gaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaa 313
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77228 gaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaa 77287

                                                                         
Query: 314   taacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacaca 373
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77288 taacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacaca 77347

                                                                         
Query: 374   tcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcatat 433
             |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 77348 tcaattttcgagctccactattatcggctacatttaaaagggtctgaggttgaatcatat 77407

                                                                         
Query: 434   tattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 493
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77408 tattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 77467

                             
Query: 494   aaagaaaaaccgggca 509
             ||||||||||||||||
Sbjct: 77468 aaagaaaaaccgggca 77483



 Score =  260 bits (131), Expect = 5e-66
 Identities = 134/135 (99%)
 Strand = Plus / Plus

                                                                         
Query: 518   cttccataccccttttagggttctatatctctaatcgaataaattgacttcgtatgggca 577
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77496 cttccataccccttttagggttctatatctctaatcgaataaattgacttcgtatgggca 77555

                                                                         
Query: 578   ttttactggccgctatggagatagctgctctagctacagtttcagatactccccccattt 637
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77556 ttttactggcagctatggagatagctgctctagctacagtttcagatactccccccattt 77615

                            
Query: 638   cataaagtatacgac 652
             |||||||||||||||
Sbjct: 77616 cataaagtatacgac 77630

to top

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  890 bits (449), Expect = 0.0
 Identities = 592/640 (92%), Gaps = 3/640 (0%)
 Strand = Plus / Plus

                                                                       
Query: 14  aatctactaatattaattctttgatctaaatttcgcctactagtatttataatacttcag 73
           ||||||||||| ||  |||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 95  aatctactaatttt--ttctttgatctatatctcgtctactagtatttataatacttcag 152

                                                                       
Query: 74  gagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaa 133
           ||||||||||||||||||| ||| ||||||||||||| ||||| ||||||| ||||||||
Sbjct: 153 gagctaatgaaactattttagtataattcaattctcttaattcttcggcaaccgcgccaa 212

                                                                       
Query: 134 aaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcat 193
           ||||||||||||||||||| || |||||||||||||| ||||| || |||||||||||||
Sbjct: 213 aaactcgagttccttttggatttcctttttgatcaatgataactgctgcattgtcatcat 272

                                                                       
Query: 194 agcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctc 253
           |||| |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct: 273 agcgtattattataccgtcgtcgcctttgaattctttacgtgtacgtacaattacagctc 332

                                                                       
Query: 254 gaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaa 313
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 333 gaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaataa 392

                                                                       
Query: 314 taacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacaca 373
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 393 taacatcaccaatacgagcatatcgctgattaccagcggctcctatgactcgaatacaca 452

                                                                       
Query: 374 tcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcatat 433
           ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 453 tcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcatat 512

                                                                       
Query: 434 tattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 493
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tattttgatttccatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 572

                                                                       
Query: 494 aaagaaaaaccgggcannnnnnnncttccatacccct-tttagggttctatatctctaat 552
           ||||||||||| ||          |||| |||| ||| ||| ||||||||||||||||||
Sbjct: 573 aaagaaaaaccaggggttttttatcttcaatactcctttttggggttctatatctctaat 632

                                                                       
Query: 553 cgaataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagct 612
           |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 633 cgaagaaattgacttcgtatgggcattttactggcagctatagagatagctgctctagct 692

                                                   
Query: 613 acagtttcagatactccccccatttcataaagtatacgac 652
           |||||||| |||||||| | ||||||||||||||| ||||
Sbjct: 693 acagtttcggatactccgctcatttcataaagtattcgac 732

to top

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  890 bits (449), Expect = 0.0
 Identities = 592/640 (92%), Gaps = 3/640 (0%)
 Strand = Plus / Plus

                                                                         
Query: 14    aatctactaatattaattctttgatctaaatttcgcctactagtatttataatacttcag 73
             ||||||||||| ||  |||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 79652 aatctactaatttt--ttctttgatctatatctcgtctactagtatttataatacttcag 79709

                                                                         
Query: 74    gagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaa 133
             ||||||||||||||||||| ||| ||||||||||||| ||||| ||||||| ||||||||
Sbjct: 79710 gagctaatgaaactattttagtataattcaattctcttaattcttcggcaaccgcgccaa 79769

                                                                         
Query: 134   aaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcat 193
             ||||||||||||||||||| || |||||||||||||| ||||| || |||||||||||||
Sbjct: 79770 aaactcgagttccttttggatttcctttttgatcaatgataactgctgcattgtcatcat 79829

                                                                         
Query: 194   agcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctc 253
             |||| |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct: 79830 agcgtattattataccgtcgtcgcctttgaattctttacgtgtacgtacaattacagctc 79889

                                                                         
Query: 254   gaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaa 313
             |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 79890 gaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaataa 79949

                                                                         
Query: 314   taacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacaca 373
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 79950 taacatcaccaatacgagcatatcgctgattaccagcggctcctatgactcgaatacaca 80009

                                                                         
Query: 374   tcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcatat 433
             ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 80010 tcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcatat 80069

                                                                         
Query: 434   tattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 493
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80070 tattttgatttccatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 80129

                                                                         
Query: 494   aaagaaaaaccgggcannnnnnnncttccatacccct-tttagggttctatatctctaat 552
             ||||||||||| ||          |||| |||| ||| ||| ||||||||||||||||||
Sbjct: 80130 aaagaaaaaccaggggttttttatcttcaatactcctttttggggttctatatctctaat 80189

                                                                         
Query: 553   cgaataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagct 612
             |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 80190 cgaagaaattgacttcgtatgggcattttactggcagctatagagatagctgctctagct 80249

                                                     
Query: 613   acagtttcagatactccccccatttcataaagtatacgac 652
             |||||||| |||||||| | ||||||||||||||| ||||
Sbjct: 80250 acagtttcggatactccgctcatttcataaagtattcgac 80289

to top

>ref|XM_481018.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 793

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                       
Query: 33  tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
           ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 690

                                                                       
Query: 93  ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
            ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 689 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 630

                                                                       
Query: 153 gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
            || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 629 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 570

                                                                       
Query: 213 ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 510

                                                                       
Query: 273 tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 450

                                                                       
Query: 333 atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 390

                                                                       
Query: 393 attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
            || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 330

                                                               
Query: 453 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 329 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 278



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                       
Query: 541 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 180

                                                               
Query: 601 gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 179 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 128

to top

>ref|XM_481019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2157

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 33   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1432

                                                                        
Query: 93   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1431 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1372

                                                                        
Query: 153  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1371 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1312

                                                                        
Query: 213  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1252

                                                                        
Query: 273  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1192

                                                                        
Query: 333  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 1132

                                                                        
Query: 393  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1072

                                                                
Query: 453  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1071 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1020



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                       
Query: 541 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 981 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 922

                                                               
Query: 601 gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 921 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 870

to top

>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24
            mRNA
          Length = 2157

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 33   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1432

                                                                        
Query: 93   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1431 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1372

                                                                        
Query: 153  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1371 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1312

                                                                        
Query: 213  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1252

                                                                        
Query: 273  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1192

                                                                        
Query: 333  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 1132

                                                                        
Query: 393  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1072

                                                                
Query: 453  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1071 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1020



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                       
Query: 541 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 981 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 922

                                                               
Query: 601 gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 921 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 870

to top

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77234 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 77293

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 77294 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 77353

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 77354 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77413

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77414 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77473

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77474 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 77533

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77534 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 77593

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77594 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 77653

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77654 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77705



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77743 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77802

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 77803 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 77854

to top

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77234 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 77293

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 77294 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 77353

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 77354 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77413

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77414 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77473

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77474 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 77533

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77534 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 77593

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77594 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 77653

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77654 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77705



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77743 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77802

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 77803 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 77854

to top

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77175 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 77234

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 77235 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 77294

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 77295 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77354

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77355 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77414

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77415 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 77474

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77475 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 77534

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77535 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 77594

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77595 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77646



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77687 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77746

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 77747 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 77798

to top

>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0034M22, complete sequence
          Length = 149435

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53245 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 53304

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 53305 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 53364

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 53365 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 53424

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53425 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 53484

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53485 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 53544

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53545 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 53604

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53605 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 53664

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 53665 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 53716



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 53754 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 53813

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 53814 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 53865

to top

>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07,
              complete sequence
          Length = 136858

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                          
Query: 33     tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
              ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126073 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 126132

                                                                          
Query: 93     ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
               ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 126133 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 126192

                                                                          
Query: 153    gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
               || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 126193 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 126252

                                                                          
Query: 213    ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
              |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126253 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 126312

                                                                          
Query: 273    tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126313 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 126372

                                                                          
Query: 333    atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
              |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126373 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 126432

                                                                          
Query: 393    attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
               || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126433 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 126492

                                                                  
Query: 453    tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 126493 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 126544



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Plus

                                                                          
Query: 541    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 126582 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 126641

                                                                  
Query: 601    gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
              |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 126642 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 126693

to top

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77221 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 77280

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 77281 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 77340

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 77341 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77400

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77401 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77460

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77461 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 77520

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77521 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 77580

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77581 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 77640

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77641 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77692



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77730 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77789

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||  ||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 77790 gctcgtctagctacagtttcggatactccgcccatttcataaagtattcgac 77841

to top

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73559 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 73500

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 73499 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 73440

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 73439 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 73380

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73379 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 73320

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73319 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 73260

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73259 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 73200

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73199 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 73140

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 73139 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 73088



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 73009 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 72950

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 72949 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 72898



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 541   tatatctctaatcgaataaattgacttcgtatggg 575
             ||||| ||||| |||| ||||||||||||||||||
Sbjct: 73049 tatatttctaaccgaagaaattgacttcgtatggg 73015

to top

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75422 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 75481

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 75482 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 75541

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 75542 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 75601

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75602 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 75661

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75662 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 75721

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75722 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 75781

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75782 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 75841

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 75842 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 75893



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 75932 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 75991

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 75992 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 76043

to top

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                        
Query: 33   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9486 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 9545

                                                                        
Query: 93   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 9546 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 9605

                                                                        
Query: 153  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 9606 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 9665

                                                                        
Query: 213  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9666 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 9725

                                                                        
Query: 273  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9726 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 9785

                                                                        
Query: 333  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9786 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 9845

                                                                        
Query: 393  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9846 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 9905

                                                                
Query: 453  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9906 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 9957



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9996  tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 10055

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 10056 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 10107

to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                           
Query: 33      tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
               ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192486 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 9192427

                                                                           
Query: 93      ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 9192426 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 9192367

                                                                           
Query: 153     gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 9192366 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 9192307

                                                                           
Query: 213     ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192306 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 9192247

                                                                           
Query: 273     tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192246 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 9192187

                                                                           
Query: 333     atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192186 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 9192127

                                                                           
Query: 393     attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192126 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 9192067

                                                                   
Query: 453     tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9192066 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 9192015



 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                           
Query: 33      tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
               ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115533 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 9115474

                                                                           
Query: 93      ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 9115473 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 9115414

                                                                           
Query: 153     gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 9115413 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 9115354

                                                                           
Query: 213     ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115353 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 9115294

                                                                           
Query: 273     tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115293 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 9115234

                                                                           
Query: 333     atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115233 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 9115174

                                                                           
Query: 393     attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115173 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 9115114

                                                                   
Query: 453     tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9115113 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 9115062



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                           
Query: 541     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9191936 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 9191877

                                                                   
Query: 601     gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
               ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 9191876 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 9191825



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                           
Query: 541     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9114983 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 9114924

                                                                   
Query: 601     gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
               ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 9114923 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 9114872



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                   
Query: 236      tacgtacaattacagctcgaattacttcggatctttctagaggcatttggg 286
                |||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 17722552 tacgtacaattacagctcaaattacttcggatctttccagaggcatttggg 17722502



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 73/84 (86%), Gaps = 4/84 (4%)
 Strand = Plus / Plus

                                                                           
Query: 227     ctttacatgtacgtacaattacagctcgaattact----tcggatctttctagaggcatt 282
               ||||||||||||||||||||||||||||  |||||    || ||||||||||||||||||
Sbjct: 2072703 ctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcatt 2072762

                                       
Query: 283     tggggcaatgcgtctttgattaca 306
               | ||||| ||| |||||| |||||
Sbjct: 2072763 ttgggcactgcttctttggttaca 2072786



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 541     tatatctctaatcgaataaattgacttcgtatggg 575
               ||||| ||||| |||| ||||||||||||||||||
Sbjct: 9191976 tatatttctaaccgaagaaattgacttcgtatggg 9191942



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 541     tatatctctaatcgaataaattgacttcgtatggg 575
               ||||| ||||| |||| ||||||||||||||||||
Sbjct: 9115023 tatatttctaaccgaagaaattgacttcgtatggg 9114989

to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369030 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 10369089

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 10369090 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 10369149

                                                                            
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 10369150 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 10369209

                                                                            
Query: 213      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369210 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 10369269

                                                                            
Query: 273      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369270 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 10369329

                                                                            
Query: 333      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369330 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 10369389

                                                                            
Query: 393      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369390 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 10369449

                                                                    
Query: 453      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10369450 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 10369501



 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                            
Query: 219      tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 274
                ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 14021582 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 14021523

                                                                            
Query: 275      gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 334
                ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 14021522 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 14021463

                                                             
Query: 335      atcgctgattaccagcagctcctatgactcgaatacacatcaatt 379
                |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 14021462 atcagtgattac---cagctcctaagattcgaatacatatcaatt 14021421



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 10369540 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 10369599

                                                                    
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
                ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 10369600 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 10369651

to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                           
Query: 33      tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
               ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259828 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 9259769

                                                                           
Query: 93      ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 9259768 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 9259709

                                                                           
Query: 153     gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 9259708 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 9259649

                                                                           
Query: 213     ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259648 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 9259589

                                                                           
Query: 273     tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259588 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 9259529

                                                                           
Query: 333     atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259528 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 9259469

                                                                           
Query: 393     attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259468 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 9259409

                                                                   
Query: 453     tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9259408 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 9259357



 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                            
Query: 159      tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 218
                |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 10791213 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 10791154

                                                                            
Query: 219      tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 278
                |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 10791153 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 10791094

                                                                  
Query: 279      catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 328
                ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10791093 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 10791044



 Score =  186 bits (94), Expect = 6e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 63       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
                |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 17206218 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattcctcggc 17206277

                                                                            
Query: 123      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
                 || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 17206278 cattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 17206336

                                                          
Query: 183      attgtcatcatagcggattattataccgtcttcgcatttgaa 224
                | |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 17206337 actgttgtcatagcgtattattataccgtcttcgcatttgaa 17206378



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                           
Query: 541     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9259318 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 9259259

                                                                   
Query: 601     gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
               ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 9259258 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 9259207

to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12755786 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 12755845

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 12755846 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 12755905

                                                                            
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 12755906 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 12755965

                                                                            
Query: 213      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12755966 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 12756025

                                                                            
Query: 273      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12756026 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 12756085

                                                                            
Query: 333      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12756086 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 12756145

                                                                            
Query: 393      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12756146 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 12756205

                                                                    
Query: 453      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 12756206 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 12756257



 Score =  737 bits (372), Expect = 0.0
 Identities = 447/472 (94%)
 Strand = Plus / Minus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 19545795 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactagttt 19545736

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||
Sbjct: 19545735 agtaaaattcaattctctcaattcctcgacgatcgtgccaaaaacgcgagttccttttgg 19545676

                                                                            
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 19545675 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 19545616

                                                                            
Query: 213      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
                |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 19545615 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttgagatctttc 19545556

                                                                            
Query: 273      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19545555 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 19545496

                                                                            
Query: 333      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
                |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19545495 atattgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 19545436

                                                                            
Query: 393      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19545435 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 19545376

                                                                    
Query: 453      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 19545375 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 19545324



 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                           
Query: 174     aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 233
               |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 3036155 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 3036096

                                                                           
Query: 234     tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 293
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3036095 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 3036036

                                                                           
Query: 294     gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 353
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3036035 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 3035976

                                    
Query: 354     tcctatgactcgaatacacat 374
               |||||||||||||||||||||
Sbjct: 3035975 tcctatgactcgaatacacat 3035955



 Score =  174 bits (88), Expect = 2e-40
 Identities = 235/280 (83%), Gaps = 3/280 (1%)
 Strand = Plus / Plus

                                                                           
Query: 79      aatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaact 138
               ||||||| ||||||  || |||||||||||||||||||| |||| |||  ||||||||| 
Sbjct: 3109053 aatgaaattattttaatacaattcaattctctcaattcc-cggcgatcatgccaaaaacg 3109111

                                                                           
Query: 139     cgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcgg 198
                |||| || ||||| || | ||||||||| || |||||||  | ||  ||  ||||||| 
Sbjct: 3109112 tgagtgccctttggatttcttttttgatcgatgataaccgttgtata-tcggcatagcgt 3109170

                                                                           
Query: 199     attattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaatt 258
               |||||||||| || ||| |||||||| ||||||||||||| || ||||||  ||| ||||
Sbjct: 3109171 attattatactgt-ttcacatttgaactctttacatgtacatataattacttctctaatt 3109229

                                                                           
Query: 259     acttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataaca 318
               |||| || ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 3109230 actttgggtctttctagaggcatttggggcactgcatctttcattacagcaacaataaca 3109289

                                                       
Query: 319     tcaccaatacgagcatatcgctgattaccagcagctccta 358
               ||| ||||| |||||||| | ||||||| |||||| ||||
Sbjct: 3109290 tcatcaatatgagcatattgttgattactagcagcaccta 3109329



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Plus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 12756295 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 12756354

                                                                    
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 12756355 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 12756406



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Minus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 19545285 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 19545226

                                                                    
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
                ||||||||||||| |||||| |||||||  ||||||||||||||||| ||||
Sbjct: 19545225 gctgctctagctatagtttcggatactctgcccatttcataaagtattcgac 19545174



 Score =  107 bits (54), Expect = 5e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                           
Query: 401     ctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaa 460
               |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3109364 ctacatttaaaagggtttgaggttgaatcatattattttgatgtcaatttgttatttcaa 3109423

                 
Query: 461     tg 462
               ||
Sbjct: 3109424 tg 3109425



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 442     tttcaatttgttatttcaatgcaaa 466
               ||||||||||| |||||||||||||
Sbjct: 4108954 tttcaatttgtaatttcaatgcaaa 4108978

to top

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71041 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 70982

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 70981 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 70922

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 70921 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 70862

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70861 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 70802

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70801 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 70742

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70741 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 70682

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70681 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 70622

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 70621 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 70570



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 70531 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 70472

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 70471 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 70420

to top

>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full
            insert sequence
          Length = 2166

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 33   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1440

                                                                        
Query: 93   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1439 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1380

                                                                        
Query: 153  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1379 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1320

                                                                        
Query: 213  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1260

                                                                        
Query: 273  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1200

                                                                        
Query: 333  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 1140

                                                                        
Query: 393  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1080

                                                                
Query: 453  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1079 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1028



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                       
Query: 541 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 990 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 931

                                                               
Query: 601 gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 930 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 879

to top

>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full
            insert sequence
          Length = 1764

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 33   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1655

                                                                        
Query: 93   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1654 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1595

                                                                        
Query: 153  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1594 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1535

                                                                        
Query: 213  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1475

                                                                        
Query: 273  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1415

                                                                        
Query: 333  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 1355

                                                                        
Query: 393  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1295

                                                                
Query: 453  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1294 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1243



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                        
Query: 541  tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
            ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 1205 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 1146

                                                                
Query: 601  gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
            |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 1145 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 1094

to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375069 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 10375128

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 10375129 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 10375188

                                                                            
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 10375189 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 10375248

                                                                            
Query: 213      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375249 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 10375308

                                                                            
Query: 273      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375309 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 10375368

                                                                            
Query: 333      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375369 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 10375428

                                                                            
Query: 393      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375429 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 10375488

                                                                    
Query: 453      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10375489 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 10375540



 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                            
Query: 219      tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 274
                ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 14029824 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 14029765

                                                                            
Query: 275      gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 334
                ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 14029764 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 14029705

                                                             
Query: 335      atcgctgattaccagcagctcctatgactcgaatacacatcaatt 379
                |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 14029704 atcagtgattac---cagctcctaagattcgaatacatatcaatt 14029663



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 10375579 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 10375638

                                                                    
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
                ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 10375639 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 10375690

to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                           
Query: 33      tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
               ||||||||| || | | ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5656684 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactattgt 5656743

                                                                           
Query: 93      ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 5656744 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 5656803

                                                                           
Query: 153     gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 5656804 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 5656863

                                                                           
Query: 213     ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656864 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 5656923

                                                                           
Query: 273     tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656924 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 5656983

                                                                           
Query: 333     atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656984 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 5657043

                                                                           
Query: 393     attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5657044 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 5657103

                                                                   
Query: 453     tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5657104 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 5657155



 Score =  365 bits (184), Expect = 1e-97
 Identities = 226/240 (94%)
 Strand = Plus / Plus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20514196 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 20514255

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 20514256 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 20514315

                                                                            
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 20514316 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 20514375

                                                                            
Query: 213      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20514376 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 20514435



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Plus

                                                                           
Query: 541     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 5657194 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 5657253

                                                                   
Query: 601     gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
               |||||| |||||||| |||| |||||||| ||||||||||||||||| ||||
Sbjct: 5657254 gctgctatagctacaatttcggatactccgcccatttcataaagtattcgac 5657305



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 86       ctattttggtaaaattcaattctctcaattc 116
                ||||||| |||||||||||||||||||||||
Sbjct: 25823760 ctattttagtaaaattcaattctctcaattc 25823730

to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33497000 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 33497059

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 33497060 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 33497119

                                                                            
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 33497120 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 33497179

                                                                            
Query: 213      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33497180 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 33497239

                                                                            
Query: 273      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
                ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 33497240 tagaggcatttggggcactgcatctttgattacagcaacaataacatcaccaatacgagc 33497299

                                                                            
Query: 333      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33497300 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 33497359

                                                                            
Query: 393      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33497360 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 33497419

                                                                    
Query: 453      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 33497420 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 33497471



 Score =  145 bits (73), Expect = 2e-31
 Identities = 160/189 (84%)
 Strand = Plus / Minus

                                                                            
Query: 148      tttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattata 207
                ||||| || |||||||||||||| |||||  | |||||||  | |||| | |||||||||
Sbjct: 30976459 tttggatttcctttttgatcaatgataacgactgcattgttgttatagagtattattata 30976400

                                                                            
Query: 208      ccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggat 267
                |||| || ||||||||| ||  |||||||| | |||||||||| ||| |||||||  |||
Sbjct: 30976399 ccgtttttgcatttgaaatccatacatgtatgcacaattacagatcgtattacttttgat 30976340

                                                                            
Query: 268      ctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaata 327
                |||||||||||||| | || || ||| ||||| |||||||||||||||||||||||||||
Sbjct: 30976339 ctttctagaggcatcttggacactgcatcttttattacagcaacaataacatcaccaata 30976280

                         
Query: 328      cgagcatat 336
                |||| ||||
Sbjct: 30976279 cgagtatat 30976271



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 33497509 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 33497568

                                                                    
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
                ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 33497569 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 33497620



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 101/124 (81%), Gaps = 8/124 (6%)
 Strand = Plus / Minus

                                                                            
Query: 130      ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 189
                ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 39109319 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 39109268

                                                                            
Query: 190      tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 249
                ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||| 
Sbjct: 39109267 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattact 39109208

                    
Query: 250      gctc 253
                ||||
Sbjct: 39109207 gctc 39109204



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 612      tacagtttcagatactccccccatttcataaagta 646
                |||||||||||||||||| ||| ||||||||||||
Sbjct: 15131590 tacagtttcagatactccgcccttttcataaagta 15131556



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 130      ccaaaaactcgagttccttttgggttgcctttttgat 166
                ||||||||||||||||||||||| || |||| |||||
Sbjct: 39108053 ccaaaaactcgagttccttttggatttccttcttgat 39108017



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 130      ccaaaaactcgagttccttttgggttgcctttttgat 166
                ||||||||||||||||||||||| || |||| |||||
Sbjct: 39103979 ccaaaaactcgagttccttttggatttccttcttgat 39103943

to top

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42197 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 42256

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 42257 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 42316

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 42317 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 42376

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42377 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 42436

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 42437 tagaggcatttggggcactgcatctttgattacagcaacaataacatcaccaatacgagc 42496

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42497 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 42556

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42557 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 42616

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 42617 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 42668



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 42706 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 42765

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 42766 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 42817

to top

>dbj|AK063122.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-E09, full
           insert sequence
          Length = 792

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Minus

                                                                       
Query: 33  tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
           ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 689

                                                                       
Query: 93  ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
            ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 688 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 629

                                                                       
Query: 153 gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
            || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 628 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 569

                                                                       
Query: 213 ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 509

                                                                       
Query: 273 tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
           ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tagaggcatttggagcactgcgtctttgattacagcaacaataacatcaccaatacgagc 449

                                                                       
Query: 333 atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 389

                                                                       
Query: 393 attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
            || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 329

                                                               
Query: 453 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 328 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 277



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                       
Query: 541 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 180

                                                               
Query: 601 gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 179 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 128

to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                           
Query: 33      tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
               ||||||||| || | | ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5656677 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactattgt 5656736

                                                                           
Query: 93      ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 5656737 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 5656796

                                                                           
Query: 153     gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 5656797 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 5656856

                                                                           
Query: 213     ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656857 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 5656916

                                                                           
Query: 273     tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656917 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 5656976

                                                                           
Query: 333     atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656977 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 5657036

                                                                           
Query: 393     attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5657037 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 5657096

                                                                   
Query: 453     tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5657097 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 5657148



 Score =  365 bits (184), Expect = 1e-97
 Identities = 226/240 (94%)
 Strand = Plus / Plus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20440410 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 20440469

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 20440470 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 20440529

                                                                            
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 20440530 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 20440589

                                                                            
Query: 213      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20440590 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 20440649



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Plus

                                                                           
Query: 541     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 5657187 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 5657246

                                                                   
Query: 601     gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
               |||||| |||||||| |||| |||||||| ||||||||||||||||| ||||
Sbjct: 5657247 gctgctatagctacaatttcggatactccgcccatttcataaagtattcgac 5657298



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 86       ctattttggtaaaattcaattctctcaattc 116
                ||||||| |||||||||||||||||||||||
Sbjct: 25751936 ctattttagtaaaattcaattctctcaattc 25751906

to top

>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 159056

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11207 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactattgt 11266

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 11267 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 11326

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 11327 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 11386

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11387 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 11446

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11447 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 11506

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11507 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 11566

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11567 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 11626

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 11627 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 11678



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 11717 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 11776

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||| |||||||| |||| |||||||| ||||||||||||||||| ||||
Sbjct: 11777 gctgctatagctacaatttcggatactccgcccatttcataaagtattcgac 11828

to top

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77177 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 77236

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 77237 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 77296

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 77297 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77356

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77357 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77416

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77417 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 77476

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 77477 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccgct 77536

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77537 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 77596

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77597 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77648



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77687 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77746

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 77747 gctactctagctacagtttcggatactccgcccatttcataaagtattcgac 77798

to top

>ref|XM_479424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2154

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 33   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1489 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1430

                                                                        
Query: 93   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1429 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1370

                                                                        
Query: 153  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1369 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1310

                                                                        
Query: 213  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1250

                                                                        
Query: 273  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1190

                                                                        
Query: 333  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
            |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1189 atatcgctgattactagcagctcctatgactcgaatacacatcaatttttgagctccact 1130

                                                                        
Query: 393  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1070

                                                                
Query: 453  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
            |||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1069 tatttcaatgcaaaaggatgaaagaaatatcgtctttccagaaagaagaacc 1018



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                       
Query: 541 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
           ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 980 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 921

                                                               
Query: 601 gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 920 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 869

to top

>ref|XM_479423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2154

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 33   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1489 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1430

                                                                        
Query: 93   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1429 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1370

                                                                        
Query: 153  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1369 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1310

                                                                        
Query: 213  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1250

                                                                        
Query: 273  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1190

                                                                        
Query: 333  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
            |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1189 atatcgctgattactagcagctcctatgactcgaatacacatcaatttttgagctccact 1130

                                                                        
Query: 393  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1070

                                                                
Query: 453  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
            |||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1069 tatttcaatgcaaaaggatgaaagaaatatcgtctttccagaaagaagaacc 1018



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                       
Query: 541 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
           ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 980 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 921

                                                               
Query: 601 gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 920 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 869

to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Plus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27922717 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 27922776

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 27922777 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 27922836

                                                                            
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 27922837 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 27922896

                                                                            
Query: 213      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27922897 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 27922956

                                                                            
Query: 273      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27922957 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 27923016

                                                                            
Query: 333      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
                |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 27923017 atatcgctgattactagcagctcctatgactcgaatacacatcaatttttgagctccact 27923076

                                                                            
Query: 393      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27923077 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 27923136

                                                                    
Query: 453      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
                |||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 27923137 tatttcaatgcaaaaggatgaaagaaatatcgtctttccagaaagaagaacc 27923188



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 27923226 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 27923285

                                                                    
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 27923286 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 27923337



 Score =  141 bits (71), Expect = 3e-30
 Identities = 126/143 (88%), Gaps = 1/143 (0%)
 Strand = Plus / Minus

                                                                           
Query: 82      gaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcga 141
               ||||||||||| |||||||||||||||||||||| |||| | |||||||||||||| | |
Sbjct: 4509148 gaaactattttagtaaaattcaattctctcaattactcgacgatcgcgccaaaaacgcaa 4509089

                                                                           
Query: 142     gttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggatt 201
               ||||| ||||| || ||||||| |  ||| ||| |||  ||||||||||||||||| |||
Sbjct: 4509088 gttccatttggatttccttttt-actaatgatatccgttgcattgtcatcatagcgtatt 4509030

                                      
Query: 202     attataccgtcttcgcatttgaa 224
               |||||||||||||||||||||||
Sbjct: 4509029 attataccgtcttcgcatttgaa 4509007

to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Minus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181868 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 23181809

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||||||| |||| |||||||||  |||||||||||||
Sbjct: 23181808 agtaaaattcaattctctcaattcctcggcgatcgtgccaaaaacgtgagttccttttgg 23181749

                                                                            
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 23181748 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 23181689

                                                                            
Query: 213      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181688 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 23181629

                                                                            
Query: 273      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181628 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 23181569

                                                                            
Query: 333      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181568 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 23181509

                                                                            
Query: 393      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181508 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 23181449

                                                                    
Query: 453      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 23181448 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 23181397



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 23181359 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 23181300

                                                                    
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 23181299 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 23181248

to top

>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86075 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 86134

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 86135 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 86194

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 86195 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 86254

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86255 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 86314

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86315 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 86374

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 86375 atatcgctgattactagcagctcctatgactcgaatacacatcaatttttgagctccact 86434

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86435 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 86494

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             |||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 86495 tatttcaatgcaaaaggatgaaagaaatatcgtctttccagaaagaagaacc 86546



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 86584 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 86643

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 86644 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 86695

to top

>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12051 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 12110

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 12111 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 12170

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 12171 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 12230

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12231 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 12290

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12291 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 12350

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 12351 atatcgctgattactagcagctcctatgactcgaatacacatcaatttttgagctccact 12410

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12411 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 12470

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             |||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 12471 tatttcaatgcaaaaggatgaaagaaatatcgtctttccagaaagaagaacc 12522



 Score =  143 bits (72), Expect = 8e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 12560 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 12619

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 12620 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 12671

to top

>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0417D05
          Length = 165752

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Minus

                                                                          
Query: 33     tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
              ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132516 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 132457

                                                                          
Query: 93     ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
               ||||||||||||||||||||||||||||| |||| |||||||||  |||||||||||||
Sbjct: 132456 agtaaaattcaattctctcaattcctcggcgatcgtgccaaaaacgtgagttccttttgg 132397

                                                                          
Query: 153    gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
               || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 132396 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 132337

                                                                          
Query: 213    ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
              |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132336 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 132277

                                                                          
Query: 273    tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132276 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 132217

                                                                          
Query: 333    atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
              |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132216 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 132157

                                                                          
Query: 393    attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
               || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132156 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 132097

                                                                  
Query: 453    tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 132096 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 132045



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                          
Query: 541    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 132007 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 131948

                                                                  
Query: 601    gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
              |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 131947 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 131896

to top

>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0642B07
          Length = 139297

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Minus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16630 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 16571

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||| |||||||||  |||||||||||||
Sbjct: 16570 agtaaaattcaattctctcaattcctcggcgatcgtgccaaaaacgtgagttccttttgg 16511

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 16510 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 16451

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16450 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 16391

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16390 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 16331

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16330 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 16271

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16270 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 16211

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 16210 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 16159



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 16121 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 16062

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 16061 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 16010

to top

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  753 bits (380), Expect = 0.0
 Identities = 464/491 (94%), Gaps = 2/491 (0%)
 Strand = Plus / Plus

                                                                         
Query: 14    aatctactaatattaattctttgatctaaatttcgcctactagtatttataatacttcag 73
             ||||||||||| ||  |||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 78994 aatctactaatttt--ttctttgatctatatctcgtctactagtatttataatacttcag 79051

                                                                         
Query: 74    gagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaa 133
             ||||||||||||||||||| || |||||||||||||| ||||| ||||||| ||||||||
Sbjct: 79052 gagctaatgaaactattttagtcaaattcaattctcttaattcttcggcaaccgcgccaa 79111

                                                                         
Query: 134   aaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcat 193
             ||||||||||||||||||| || |||||||||||||| ||||| || |||||||||||||
Sbjct: 79112 aaactcgagttccttttggatttcctttttgatcaatgataactgctgcattgtcatcat 79171

                                                                         
Query: 194   agcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctc 253
             |||| |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct: 79172 agcgtattattataccgtcgtcgcctttgaattctttacgtgtacgtacaattacagctc 79231

                                                                         
Query: 254   gaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaa 313
             |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 79232 gaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaataa 79291

                                                                         
Query: 314   taacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacaca 373
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 79292 taacatcaccaatacgagcatatcgctgattaccagcggctcctatgactcgaatacaca 79351

                                                                         
Query: 374   tcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcatat 433
             ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 79352 tcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcatat 79411

                                                                         
Query: 434   tattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 493
             ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79412 tatttggatttccatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 79471

                        
Query: 494   aaagaaaaacc 504
             |||||||||||
Sbjct: 79472 aaagaaaaacc 79482



 Score =  180 bits (91), Expect = 4e-42
 Identities = 115/123 (93%)
 Strand = Plus / Plus

                                                                         
Query: 530   ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 589
             |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 79509 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 79568

                                                                         
Query: 590   ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 649
             |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 79569 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 79628

                
Query: 650   gac 652
             |||
Sbjct: 79629 gac 79631

to top

>emb|X06734.1|CHZMRP14 Maize chloroplast genes for ribosomal proteins L14, S8 and L16
           partial
          Length = 1287

 Score =  753 bits (380), Expect = 0.0
 Identities = 464/491 (94%), Gaps = 2/491 (0%)
 Strand = Plus / Minus

                                                                       
Query: 14  aatctactaatattaattctttgatctaaatttcgcctactagtatttataatacttcag 73
           ||||||||||| ||  |||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 675 aatctactaatttt--ttctttgatctatatctcgtctactagtatttataatacttcag 618

                                                                       
Query: 74  gagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaa 133
           ||||||||||||||||||| || |||||||||||||| ||||| ||||||| ||||||||
Sbjct: 617 gagctaatgaaactattttagtcaaattcaattctcttaattcttcggcaaccgcgccaa 558

                                                                       
Query: 134 aaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcat 193
           ||||||||||||||||||| || |||||||||||||| ||||| || |||||||||||||
Sbjct: 557 aaactcgagttccttttggatttcctttttgatcaatgataactgctgcattgtcatcat 498

                                                                       
Query: 194 agcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctc 253
           |||| |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct: 497 agcgtattattataccgtcgtcgcctttgaattctttacgtgtacgtacaattacagctc 438

                                                                       
Query: 254 gaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaa 313
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 437 gaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaataa 378

                                                                       
Query: 314 taacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacaca 373
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 taacatcaccaatacgagcatatcgctgattaccagcggctcctatgactcgaatacaca 318

                                                                       
Query: 374 tcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcatat 433
           ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 317 tcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcatat 258

                                                                       
Query: 434 tattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 493
           ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tatttggatttccatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 198

                      
Query: 494 aaagaaaaacc 504
           |||||||||||
Sbjct: 197 aaagaaaaacc 187



 Score =  180 bits (91), Expect = 4e-42
 Identities = 115/123 (93%)
 Strand = Plus / Minus

                                                                       
Query: 530 ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 589
           |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 160 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 101

                                                                       
Query: 590 ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 649
           |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 100 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 41

              
Query: 650 gac 652
           |||
Sbjct: 40  gac 38

to top

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  753 bits (380), Expect = 0.0
 Identities = 464/491 (94%), Gaps = 2/491 (0%)
 Strand = Plus / Plus

                                                                         
Query: 14    aatctactaatattaattctttgatctaaatttcgcctactagtatttataatacttcag 73
             ||||||||||| ||  |||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 79010 aatctactaatttt--ttctttgatctatatctcgtctactagtatttataatacttcag 79067

                                                                         
Query: 74    gagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaa 133
             ||||||||||||||||||| || |||||||||||||| ||||| ||||||| ||||||||
Sbjct: 79068 gagctaatgaaactattttagtcaaattcaattctcttaattcttcggcaaccgcgccaa 79127

                                                                         
Query: 134   aaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcat 193
             ||||||||||||||||||| || |||||||||||||| ||||| || |||||||||||||
Sbjct: 79128 aaactcgagttccttttggatttcctttttgatcaatgataactgctgcattgtcatcat 79187

                                                                         
Query: 194   agcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctc 253
             |||| |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct: 79188 agcgtattattataccgtcgtcgcctttgaattctttacgtgtacgtacaattacagctc 79247

                                                                         
Query: 254   gaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaa 313
             |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 79248 gaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaataa 79307

                                                                         
Query: 314   taacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacaca 373
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 79308 taacatcaccaatacgagcatatcgctgattaccagcggctcctatgactcgaatacaca 79367

                                                                         
Query: 374   tcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcatat 433
             ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 79368 tcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcatat 79427

                                                                         
Query: 434   tattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 493
             ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79428 tatttggatttccatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccag 79487

                        
Query: 494   aaagaaaaacc 504
             |||||||||||
Sbjct: 79488 aaagaaaaacc 79498



 Score =  180 bits (91), Expect = 4e-42
 Identities = 115/123 (93%)
 Strand = Plus / Plus

                                                                         
Query: 530   ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 589
             |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 79525 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 79584

                                                                         
Query: 590   ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 649
             |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 79585 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 79644

                
Query: 650   gac 652
             |||
Sbjct: 79645 gac 79647

to top

>ref|XM_450630.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 793

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                       
Query: 33  tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
           ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 690

                                                                       
Query: 93  ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
            ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 689 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 630

                                                                       
Query: 153 gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
            || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 629 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 570

                                                                       
Query: 213 ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 510

                                                                       
Query: 273 tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
           ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 450

                                                                       
Query: 333 atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
           |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 449 atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 390

                                                                       
Query: 393 attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 389 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 330

                                                               
Query: 453 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 329 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 278



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Minus

                                                                       
Query: 541 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
           ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 180

                                                               
Query: 601 gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||
Sbjct: 179 gctgctctagctacagtttcggatactccgcccattttataaagtattcgac 128

to top

>ref|XM_450631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2141

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                        
Query: 33   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1418

                                                                        
Query: 93   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1417 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1358

                                                                        
Query: 153  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1357 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1298

                                                                        
Query: 213  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1238

                                                                        
Query: 273  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
            ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1237 tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 1178

                                                                        
Query: 333  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
            |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 1177 atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 1118

                                                                        
Query: 393  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1117 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 1058

                                                                
Query: 453  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1057 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1006



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Minus

                                                                       
Query: 541 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
           ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 967 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 908

                                                               
Query: 601 gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||
Sbjct: 907 gctgctctagctacagtttcggatactccgcccattttataaagtattcgac 856

to top

>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA
          Length = 1742

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                        
Query: 33   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1692 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1633

                                                                        
Query: 93   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1632 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1573

                                                                        
Query: 153  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1572 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1513

                                                                        
Query: 213  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1512 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1453

                                                                        
Query: 273  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
            ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1452 tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 1393

                                                                        
Query: 333  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
            |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 1392 atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 1333

                                                                        
Query: 393  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1332 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 1273

                                                                
Query: 453  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1272 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1221



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Minus

                                                                        
Query: 541  tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
            ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 1182 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 1123

                                                                
Query: 601  gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
            |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||
Sbjct: 1122 gctgctctagctacagtttcggatactccgcccattttataaagtattcgac 1071

to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11896649 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 11896590

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 11896589 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 11896530

                                                                            
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 11896529 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 11896470

                                                                            
Query: 213      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11896469 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 11896410

                                                                            
Query: 273      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
                ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11896409 tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 11896350

                                                                            
Query: 333      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
                |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 11896349 atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 11896290

                                                                            
Query: 393      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
                 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11896289 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 11896230

                                                                    
Query: 453      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 11896229 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 11896178



 Score =  186 bits (94), Expect = 6e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 63       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
                |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 20862633 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 20862692

                                                                            
Query: 123      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
                 || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 20862693 gattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 20862751

                                                          
Query: 183      attgtcatcatagcggattattataccgtcttcgcatttgaa 224
                |||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 20862752 attgttgtcatagcgtattattataccgtcttcgcatttgaa 20862793



 Score =  153 bits (77), Expect = 9e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                            
Query: 424      tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 483
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14456068 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 14456009

                                     
Query: 484      gtctttccagaaagaaaaacc 504
                |||||||||||||||| ||||
Sbjct: 14456008 gtctttccagaaagaagaacc 14455988



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 14455950 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 14455891

                                                                    
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 14455890 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 14455839



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Minus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 11896139 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 11896080

                                                                    
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
                |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||
Sbjct: 11896079 gctgctctagctacagtttcggatactccgcccattttataaagtattcgac 11896028

to top

>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78139 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 78080

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 78079 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 78020

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 78019 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77960

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77959 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77900

                                                                         
Query: 273   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
             ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 77899 tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 77840

                                                                         
Query: 333   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 77839 atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 77780

                                                                         
Query: 393   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
              || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 77779 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 77720

                                                                 
Query: 453   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77719 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77668



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Minus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 77629 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 77570

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||
Sbjct: 77569 gctgctctagctacagtttcggatactccgcccattttataaagtattcgac 77518

to top

>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0441A12
          Length = 185437

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                        
Query: 33   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1070

                                                                        
Query: 93   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1069 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1010

                                                                        
Query: 153  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1009 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 950

                                                                        
Query: 213  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949  ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 890

                                                                        
Query: 273  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
            ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 889  tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 830

                                                                        
Query: 333  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
            |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 829  atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 770

                                                                        
Query: 393  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 769  gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 710

                                                                
Query: 453  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 709  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 658



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Minus

                                                                       
Query: 541 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
           ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 619 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 560

                                                               
Query: 601 gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||
Sbjct: 559 gctgctctagctacagtttcggatactccgcccattttataaagtattcgac 508

to top

>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12,
              complete sequence
          Length = 157069

 Score =  737 bits (372), Expect = 0.0
 Identities = 447/472 (94%)
 Strand = Plus / Minus

                                                                          
Query: 33     tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
              ||||||||| || | | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 146507 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactagttt 146448

                                                                          
Query: 93     ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
               ||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||
Sbjct: 146447 agtaaaattcaattctctcaattcctcgacgatcgtgccaaaaacgcgagttccttttgg 146388

                                                                          
Query: 153    gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
               || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 146387 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 146328

                                                                          
Query: 213    ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
              |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 146327 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttgagatctttc 146268

                                                                          
Query: 273    tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146267 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 146208

                                                                          
Query: 333    atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
              |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146207 atattgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 146148

                                                                          
Query: 393    attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
               || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146147 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 146088

                                                                  
Query: 453    tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 146087 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 146036



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Minus

                                                                          
Query: 541    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 145997 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 145938

                                                                  
Query: 601    gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
              ||||||||||||| |||||| |||||||  ||||||||||||||||| ||||
Sbjct: 145937 gctgctctagctatagtttcggatactctgcccatttcataaagtattcgac 145886

to top

>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11,
            complete sequence
          Length = 102567

 Score =  737 bits (372), Expect = 0.0
 Identities = 447/472 (94%)
 Strand = Plus / Minus

                                                                        
Query: 33   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
            ||||||||| || | | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5694 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactagttt 5635

                                                                        
Query: 93   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
             ||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||
Sbjct: 5634 agtaaaattcaattctctcaattcctcgacgatcgtgccaaaaacgcgagttccttttgg 5575

                                                                        
Query: 153  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 5574 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 5515

                                                                        
Query: 213  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
            |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 5514 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttgagatctttc 5455

                                                                        
Query: 273  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 332
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5454 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 5395

                                                                        
Query: 333  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 392
            |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5394 atattgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 5335

                                                                        
Query: 393  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 452
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5334 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 5275

                                                                
Query: 453  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 504
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5274 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 5223



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Minus

                                                                        
Query: 541  tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
            ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 5184 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 5125

                                                                
Query: 601  gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
            ||||||||||||| |||||| |||||||  ||||||||||||||||| ||||
Sbjct: 5124 gctgctctagctatagtttcggatactctgcccatttcataaagtattcgac 5073

to top

>ref|NM_190859.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 372

 Score =  618 bits (312), Expect = e-174
 Identities = 357/372 (95%)
 Strand = Plus / Minus

                                                                       
Query: 60  ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 372 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 313

                                                                       
Query: 120 ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
           ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 312 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 253

                                                                       
Query: 180 agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
            |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 252 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 193

                                                                       
Query: 240 tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 299
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 192 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcatcttt 133

                                                                       
Query: 300 gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 359
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 132 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 73

                                                                       
Query: 360 gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 419
           ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 72  gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 13

                       
Query: 420 aggttgaatcat 431
           ||||||||||||
Sbjct: 12  aggttgaatcat 1

to top

>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete
             sequence
          Length = 141691

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                         
Query: 193   tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 252
             ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 14317 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 14376

                                                                         
Query: 253   cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 312
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 14377 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 14436

                                                                         
Query: 313   ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 372
             |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 14437 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 14496

                                                                         
Query: 373   atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 432
             |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 14497 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 14556

                                                                         
Query: 433   ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 492
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14557 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 14616

                 
Query: 493   gaaa 496
             ||||
Sbjct: 14617 gaaa 14620



 Score =  202 bits (102), Expect = 1e-48
 Identities = 148/162 (91%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13978 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 14037

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 14038 agtaaaattcaattctctcaattcctaggcgatcgcgccaaaaacgcgagttccttttgg 14097

                                                       
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcata 194
              || ||||||| |||||| |||||||| |||||||| |||||
Sbjct: 14098 atttccttttt-atcaatgataaccgctgcattgtcgtcata 14138



 Score =  141 bits (71), Expect = 3e-30
 Identities = 98/107 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 14667 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 14726

                                                            
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtat 647
             |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 14727 gctgctctagctacagtttcggatactccgcccatttcataaagtat 14773

to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                            
Query: 193      tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 252
                ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 24638131 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 24638190

                                                                            
Query: 253      cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 312
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 24638191 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 24638250

                                                                            
Query: 313      ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 372
                |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 24638251 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 24638310

                                                                            
Query: 373      atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 432
                |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 24638311 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 24638370

                                                                            
Query: 433      ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 492
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 24638371 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 24638430

                    
Query: 493      gaaa 496
                ||||
Sbjct: 24638431 gaaa 24638434



 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                            
Query: 183      attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 242
                |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32000439 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 32000498

                                                                            
Query: 243      aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 302
                ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 32000499 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 32000558

                                                                            
Query: 303      tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 362
                |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 32000559 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 32000618

                                                                            
Query: 363      tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 422
                |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 32000619 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 32000678

                                                         
Query: 423      ttgaatcatattattttgatttcaatttgttatttcaatgc 463
                |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 32000679 ttgaatcatattattttgattttaatttgttatttcaatgc 32000719



 Score =  202 bits (102), Expect = 1e-48
 Identities = 148/162 (91%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24637792 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 24637851

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 24637852 agtaaaattcaattctctcaattcctaggcgatcgcgccaaaaacgcgagttccttttgg 24637911

                                                          
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcata 194
                 || ||||||| |||||| |||||||| |||||||| |||||
Sbjct: 24637912 atttccttttt-atcaatgataaccgctgcattgtcgtcata 24637952



 Score =  163 bits (82), Expect = 9e-37
 Identities = 143/162 (88%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 63       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
                |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 27557409 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 27557468

                                                                            
Query: 123      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
                 || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| |||
Sbjct: 27557469 gattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtagc 27557527

                                                          
Query: 183      attgtcatcatagcggattattataccgtcttcgcatttgaa 224
                | |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 27557528 actgtcgtcatagcgtattattatactgtcttcgcatttgaa 27557569



 Score =  141 bits (71), Expect = 3e-30
 Identities = 98/107 (91%)
 Strand = Plus / Plus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 24638481 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 24638540

                                                               
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtat 647
                |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 24638541 gctgctctagctacagtttcggatactccgcccatttcataaagtat 24638587

to top

>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136470

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                         
Query: 193   tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 252
             ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 70177 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 70236

                                                                         
Query: 253   cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 312
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 70237 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 70296

                                                                         
Query: 313   ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 372
             |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 70297 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 70356

                                                                         
Query: 373   atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 432
             |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 70357 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 70416

                                                                         
Query: 433   ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 492
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 70417 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 70476

                 
Query: 493   gaaa 496
             ||||
Sbjct: 70477 gaaa 70480



 Score =  202 bits (102), Expect = 1e-48
 Identities = 148/162 (91%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69838 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 69897

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 69898 agtaaaattcaattctctcaattcctaggcgatcgcgccaaaaacgcgagttccttttgg 69957

                                                       
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcata 194
              || ||||||| |||||| |||||||| |||||||| |||||
Sbjct: 69958 atttccttttt-atcaatgataaccgctgcattgtcgtcata 69998



 Score =  141 bits (71), Expect = 3e-30
 Identities = 98/107 (91%)
 Strand = Plus / Plus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 70527 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 70586

                                                            
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtat 647
             |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 70587 gctgctctagctacagtttcggatactccgcccatttcataaagtat 70633

to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                            
Query: 193      tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 252
                ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 24555600 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 24555659

                                                                            
Query: 253      cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 312
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 24555660 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 24555719

                                                                            
Query: 313      ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 372
                |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 24555720 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 24555779

                                                                            
Query: 373      atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 432
                |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 24555780 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 24555839

                                                                            
Query: 433      ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 492
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 24555840 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 24555899

                    
Query: 493      gaaa 496
                ||||
Sbjct: 24555900 gaaa 24555903



 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                            
Query: 183      attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 242
                |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32090951 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 32091010

                                                                            
Query: 243      aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 302
                ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 32091011 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 32091070

                                                                            
Query: 303      tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 362
                |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 32091071 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 32091130

                                                                            
Query: 363      tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 422
                |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 32091131 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 32091190

                                                         
Query: 423      ttgaatcatattattttgatttcaatttgttatttcaatgc 463
                |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 32091191 ttgaatcatattattttgattttaatttgttatttcaatgc 32091231



 Score =  202 bits (102), Expect = 1e-48
 Identities = 148/162 (91%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 33       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24555261 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 24555320

                                                                            
Query: 93       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
                 ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 24555321 agtaaaattcaattctctcaattcctaggcgatcgcgccaaaaacgcgagttccttttgg 24555380

                                                          
Query: 153      gttgcctttttgatcaattataaccgcagcattgtcatcata 194
                 || ||||||| |||||| |||||||| |||||||| |||||
Sbjct: 24555381 atttccttttt-atcaatgataaccgctgcattgtcgtcata 24555421



 Score =  163 bits (82), Expect = 9e-37
 Identities = 143/162 (88%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 63       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
                |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 27648732 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 27648791

                                                                            
Query: 123      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
                 || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| |||
Sbjct: 27648792 gattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtagc 27648850

                                                          
Query: 183      attgtcatcatagcggattattataccgtcttcgcatttgaa 224
                | |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 27648851 actgtcgtcatagcgtattattatactgtcttcgcatttgaa 27648892



 Score =  141 bits (71), Expect = 3e-30
 Identities = 98/107 (91%)
 Strand = Plus / Plus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 24555950 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 24556009

                                                               
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtat 647
                |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 24556010 gctgctctagctacagtttcggatactccgcccatttcataaagtat 24556056

to top

>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
             sequence
          Length = 144306

 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                         
Query: 183   attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 242
             |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92391 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 92450

                                                                         
Query: 243   aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 302
             ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 92451 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 92510

                                                                         
Query: 303   tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 362
             |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 92511 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 92570

                                                                         
Query: 363   tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 422
             |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 92571 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 92630

                                                      
Query: 423   ttgaatcatattattttgatttcaatttgttatttcaatgc 463
             |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 92631 ttgaatcatattattttgattttaatttgttatttcaatgc 92671

to top

>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence,
            complete sequence
          Length = 178158

 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                        
Query: 183  attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 242
            |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 1623

                                                                        
Query: 243  aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 302
            ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 1624 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 1683

                                                                        
Query: 303  tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 362
            |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1684 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 1743

                                                                        
Query: 363  tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 422
            |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1744 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 1803

                                                     
Query: 423  ttgaatcatattattttgatttcaatttgttatttcaatgc 463
            |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1804 ttgaatcatattattttgattttaatttgttatttcaatgc 1844

to top

>gb|DQ069425.1| Typha latifolia ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  402 bits (203), Expect = e-109
 Identities = 325/365 (89%), Gaps = 3/365 (0%)
 Strand = Plus / Minus

                                                                       
Query: 67  acttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatc 126
           |||||||||||||||||||||||||| ||||||||||| | ||||||||||   || |||
Sbjct: 362 acttcaggagctaatgaaactattttagtaaaattcaactgtctcaattcccgagcgatc 303

                                                                       
Query: 127 gcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattg 186
           || ||||||||||||||||||||||| || |||| ||||||||| | ||| |||||||||
Sbjct: 302 gcaccaaaaactcgagttccttttggatttccttcttgatcaatgacaactgcagcattg 243

                                                                       
Query: 187 tcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaatt 246
           |||||||| || ||||| ||||||| ||| | ||||| ||||||||||||||||||||||
Sbjct: 242 tcatcatatcgtattatgataccgttttcacgtttgagttctttacatgtacgtacaatt 183

                                                                       
Query: 247 acagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattaca 306
           ||||||| ||||||||| ||||||||||||||||| | ||| | ||| ||||||||||||
Sbjct: 182 acagctctaattacttctgatctttctagaggcatattgggaactgcttctttgattaca 123

                                                                       
Query: 307 gcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcga 366
           ||||||||||||||||||||| |||||||||| |||||||   |||||||||||| ||||
Sbjct: 122 gcaacaataacatcaccaatatgagcatatcggtgattac---cagctcctatgattcga 66

                                                                       
Query: 367 atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 426
           |||||||| |||||||||||||| || || || |||||||| ||||||||||||||||||
Sbjct: 65  atacacattaattttcgagctccgctgttatccgctacattcaaaagggtctgaggttga 6

                
Query: 427 atcat 431
           |||||
Sbjct: 5   atcat 1

to top

>gb|DQ069426.1| Yucca schidigera ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  387 bits (195), Expect = e-104
 Identities = 326/369 (88%), Gaps = 3/369 (0%)
 Strand = Plus / Minus

                                                                       
Query: 63  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
           |||||| || |||||||||||||||||||| ||||||||||| | ||||||||||   ||
Sbjct: 366 taatacctcgggagctaatgaaactattttagtaaaattcaactgtctcaattcccgagc 307

                                                                       
Query: 123 aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
           |||||| ||||||| |||||||||||||||||| |||| ||||||||| | |||||| ||
Sbjct: 306 aatcgccccaaaaattcgagttccttttgggtttccttcttgatcaatgacaaccgctgc 247

                                                                       
Query: 183 attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 242
           |||||||||||| || ||||| |||||||  || | ||||| ||||||||||||||||||
Sbjct: 246 attgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtac 187

                                                                       
Query: 243 aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 302
           ||||||||||| ||||||||| ||||||||||||||||| | ||||| ||| ||||||||
Sbjct: 186 aattacagctctaattacttctgatctttctagaggcatattgggcactgcttctttgat 127

                                                                       
Query: 303 tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 362
           ||||||||||||||| ||||||||| |||||||||| |||||||   |||| ||||||| 
Sbjct: 126 tacagcaacaataacgtcaccaatatgagcatatcggtgattac---cagcccctatgat 70

                                                                       
Query: 363 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 422
           ||||||||||||||||| ||||||||| || || ||||||||||| |||||||| |||||
Sbjct: 69  tcgaatacacatcaattctcgagctccgctgttatctgctacattcaaaagggtttgagg 10

                    
Query: 423 ttgaatcat 431
           |||||||||
Sbjct: 9   ttgaatcat 1

to top

>emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa0005K20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 143618

 Score =  365 bits (184), Expect = 1e-97
 Identities = 226/240 (94%)
 Strand = Plus / Minus

                                                                         
Query: 33    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 92
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79037 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 78978

                                                                         
Query: 93    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 152
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 78977 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 78918

                                                                         
Query: 153   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 212
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 78917 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 78858

                                                                         
Query: 213   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 272
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78857 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 78798

to top

>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0059G01, complete sequence
          Length = 141661

 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                         
Query: 174   aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 233
             |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 23399 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 23340

                                                                         
Query: 234   tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 293
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 23339 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 23280

                                                                         
Query: 294   gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 353
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23279 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 23220

                                  
Query: 354   tcctatgactcgaatacacat 374
             |||||||||||||||||||||
Sbjct: 23219 tcctatgactcgaatacacat 23199



 Score =  174 bits (88), Expect = 2e-40
 Identities = 235/280 (83%), Gaps = 3/280 (1%)
 Strand = Plus / Plus

                                                                         
Query: 79    aatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaact 138
             ||||||| ||||||  || |||||||||||||||||||| |||| |||  ||||||||| 
Sbjct: 96297 aatgaaattattttaatacaattcaattctctcaattcc-cggcgatcatgccaaaaacg 96355

                                                                         
Query: 139   cgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcgg 198
              |||| || ||||| || | ||||||||| || |||||||  | ||  ||  ||||||| 
Sbjct: 96356 tgagtgccctttggatttcttttttgatcgatgataaccgttgtata-tcggcatagcgt 96414

                                                                         
Query: 199   attattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaatt 258
             |||||||||| || ||| |||||||| ||||||||||||| || ||||||  ||| ||||
Sbjct: 96415 attattatactgt-ttcacatttgaactctttacatgtacatataattacttctctaatt 96473

                                                                         
Query: 259   acttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataaca 318
             |||| || ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 96474 actttgggtctttctagaggcatttggggcactgcatctttcattacagcaacaataaca 96533

                                                     
Query: 319   tcaccaatacgagcatatcgctgattaccagcagctccta 358
             ||| ||||| |||||||| | ||||||| |||||| ||||
Sbjct: 96534 tcatcaatatgagcatattgttgattactagcagcaccta 96573



 Score =  107 bits (54), Expect = 5e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                         
Query: 401   ctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaa 460
             |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 96608 ctacatttaaaagggtttgaggttgaatcatattattttgatgtcaatttgttatttcaa 96667

               
Query: 461   tg 462
             ||
Sbjct: 96668 tg 96669

to top

>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16,
              complete sequence
          Length = 159525

 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                          
Query: 174    aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 233
              |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 130171 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 130112

                                                                          
Query: 234    tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 293
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 130111 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 130052

                                                                          
Query: 294    gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 353
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 130051 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 129992

                                   
Query: 354    tcctatgactcgaatacacat 374
              |||||||||||||||||||||
Sbjct: 129991 tcctatgactcgaatacacat 129971

to top

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  349 bits (176), Expect = 7e-93
 Identities = 337/390 (86%), Gaps = 3/390 (0%)
 Strand = Plus / Plus

                                                                         
Query: 50    ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctc 109
             |||||||||||||||| |||||||| |||||||| |||||||| || ||||| || | ||
Sbjct: 81909 ctactagtatttataagacttcaggggctaatgagactattttagtgaaatttaactttc 81968

                                                                         
Query: 110   tcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaa 169
             ||||||||   |||||||| ||||||||||||||||||||||| || |||| ||||||||
Sbjct: 81969 tcaattcccgagcaatcgctccaaaaactcgagttccttttggatttccttcttgatcaa 82028

                                                                         
Query: 170   ttataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctt 229
             | | ||| || |||||||||||||| || ||||| |||||||  |||| ||||| |||||
Sbjct: 82029 tgacaactgccgcattgtcatcatatcgtattatcataccgttgtcgcgtttgagttctt 82088

                                                                         
Query: 230   tacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggca 289
             |||||||||||||||||||||||||||| ||||| |||||||| |||||||| | |||||
Sbjct: 82089 tacatgtacgtacaattacagctcgaataacttctgatctttcgagaggcatattgggca 82148

                                                                         
Query: 290   atgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccag 349
              ||| ||||||||||||||||||||||| ||||| ||| ||||||||||  ||||||   
Sbjct: 82149 ctgcttctttgattacagcaacaataacgtcaccgatatgagcatatcggcgattac--- 82205

                                                                         
Query: 350   cagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattta 409
              ||| ||||||| |||||| |||||||||| |||||| || || ||||| |||||||| |
Sbjct: 82206 tagcccctatgattcgaatgcacatcaattctcgagccccgctgttgtccgctacattca 82265

                                           
Query: 410   aaagggtctgaggttgaatcatattatttt 439
             || ||||||||||||||||||||| |||||
Sbjct: 82266 aatgggtctgaggttgaatcatatcatttt 82295



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                         
Query: 559   aattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagtt 618
             |||||| ||||||| |||||||| |  || ||||| || ||||| ||||| |||||||||
Sbjct: 82437 aattgagttcgtataggcattttgcacgcagctattgaaatagccgctctggctacagtt 82496

                                               
Query: 619   tcagatactccccccatttcataaagtatacgac 652
             || |||||||| ||||||||||||||||| ||||
Sbjct: 82497 tcggatactccgcccatttcataaagtattcgac 82530

to top

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  323 bits (163), Expect = 4e-85
 Identities = 344/401 (85%), Gaps = 5/401 (1%)
 Strand = Plus / Plus

                                                                         
Query: 61    tataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg 120
             ||||| ||||| || ||||||||||| ||||| ||||||||||| | || |||||| |||
Sbjct: 82583 tataagacttcgggtgctaatgaaacgattttagtaaaattcaactgtcgcaattc-tcg 82641

                                                                         
Query: 121   -gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
              ||||| || ||||||| ||||||||||||||| || |||| ||||||||| ||||||||
Sbjct: 82642 agcaattgcaccaaaaattcgagttccttttggatttccttcttgatcaatgataaccgc 82701

                                                                         
Query: 180   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
              |||||||||||||| || ||||| || ||||  || | ||||| |||||||||||| ||
Sbjct: 82702 tgcattgtcatcatatcgtattatcatgccgttgtcacgtttgagttctttacatgtgcg 82761

                                                                         
Query: 240   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 299
             |||||| ||||||| ||||| ||| ||||||||||||||||| | ||||| ||| |||||
Sbjct: 82762 tacaatcacagctctaattatttctgatctttctagaggcatgttgggcactgcttcttt 82821

                                                                         
Query: 300   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 359
             ||||||||||||||||||||| |||| | |||||||||| |||||||   ||| ||||||
Sbjct: 82822 gattacagcaacaataacatcgccaagatgagcatatcggtgattac---cagttcctat 82878

                                                                         
Query: 360   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 419
             || |||||||||||| |||||| |||||||||| || || |||||||| |||||||||||
Sbjct: 82879 gattcgaatacacattaatttttgagctccactgttatccgctacattcaaaagggtctg 82938

                                                      
Query: 420   aggttgaatcatattattttgatttcaatttgttatttcaa 460
             |||||||||||||| ||||| | || ||| | |||||||||
Sbjct: 82939 aggttgaatcatatcatttttaatttaatctcttatttcaa 82979



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 610   gctacagtttcagatactccccccatttcataaa 643
             ||||||| |||||||||||| | |||||||||||
Sbjct: 83144 gctacagcttcagatactccactcatttcataaa 83177

to top

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  319 bits (161), Expect = 6e-84
 Identities = 328/383 (85%), Gaps = 3/383 (0%)
 Strand = Plus / Plus

                                                                         
Query: 57    tatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 116
             |||||||||||| ||||||||||  ||||||||||| || |||||||| | |||||||||
Sbjct: 80435 tatttataatacctcaggagctagggaaactattttagtgaaattcaaatgtctcaattc 80494

                                                                         
Query: 117   ctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataac 176
             |   || ||||| ||||||||||||||||||||||| || |||| ||||||||| | |||
Sbjct: 80495 ccgagcgatcgcaccaaaaactcgagttccttttggattcccttcttgatcaatgacaac 80554

                                                                         
Query: 177   cgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgt 236
              || |||||||||||||| || ||||| |||||||  || | ||||| ||||||||||||
Sbjct: 80555 tgctgcattgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacatgt 80614

                                                                         
Query: 237   acgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtc 296
             |||||||||||||||||  |  ||||| ||||||||||||| ||| | ||| | ||| ||
Sbjct: 80615 acgtacaattacagctctgaccacttctgatctttctagagacatattgggtactgcttc 80674

                                                                         
Query: 297   tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 356
             ||||||||||||||||||||| ||||||||| ||||||||||  ||||||     |||||
Sbjct: 80675 tttgattacagcaacaataacgtcaccaatatgagcatatcggcgattac---tggctcc 80731

                                                                         
Query: 357   tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 416
             ||||| ||||||||||||||||| |||||| || || || || |||||||||||||||||
Sbjct: 80732 tatgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaaagggt 80791

                                    
Query: 417   ctgaggttgaatcatattatttt 439
             ||||||||||||||||| |||||
Sbjct: 80792 ctgaggttgaatcatatcatttt 80814



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 598   atagctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             ||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 81003 atagcggctctggctacagtttctgatactccacccatctcataaagtattcgac 81057

to top

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  307 bits (155), Expect = 2e-80
 Identities = 319/373 (85%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82356 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82415

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 82416 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 82475

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             |||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82476 cagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggtac 82535

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82536 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82595

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82596 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82652

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82653 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82712

                          
Query: 419   gaggttgaatcat 431
             |||||||||||||
Sbjct: 82713 gaggttgaatcat 82725



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 624   tactccccccatttcataaagtat 647
             |||||| |||||||||||||||||
Sbjct: 82928 tactccacccatttcataaagtat 82951

to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  305 bits (154), Expect = 1e-79
 Identities = 184/194 (94%)
 Strand = Plus / Minus

                                                                            
Query: 311      caataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatac 370
                |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 24916826 caattacatcaccaatacgagcatatcgctgattactagcagctcctatgacttgaatac 24916767

                                                                            
Query: 371      acatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatca 430
                |||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 24916766 acattaattttcgagctccactattatctgctacatttaaaagggtctgaggttaaatta 24916707

                                                                            
Query: 431      tattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttc 490
                ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 24916706 tattattttgatttcaatttgctatttcaatgcaaaaagatgaaagaaatattgtctttc 24916647

                              
Query: 491      cagaaagaaaaacc 504
                ||||||||| ||||
Sbjct: 24916646 cagaaagaagaacc 24916633



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                            
Query: 541      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 24916596 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 24916537

                                                                    
Query: 601      gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 24916536 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 24916485



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 114      ttcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattat 173
                ||||||||| |||| ||||||||| |||||||||||||| || | ||||||| |||| ||
Sbjct: 20875041 ttcctcggcgatcgtgccaaaaacgcgagttccttttggatttcttttttgaccaatgat 20875100

                                  
Query: 174      aaccgcagcattgtcatc 191
                |||||  |||||||||||
Sbjct: 20875101 aaccgttgcattgtcatc 20875118



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 95       taaaattcaattctctcaattcctcggcaatcgcgccaaaaac 137
                ||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 32000475 taaaattcaatactctcgattcctcggcgatcgcgccaaaaac 32000433

to top

>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1215B07
          Length = 165957

 Score =  305 bits (154), Expect = 1e-79
 Identities = 184/194 (94%)
 Strand = Plus / Minus

                                                                         
Query: 311   caataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatac 370
             |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 78109 caattacatcaccaatacgagcatatcgctgattactagcagctcctatgacttgaatac 78050

                                                                         
Query: 371   acatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatca 430
             |||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 78049 acattaattttcgagctccactattatctgctacatttaaaagggtctgaggttaaatta 77990

                                                                         
Query: 431   tattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttc 490
             ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 77989 tattattttgatttcaatttgctatttcaatgcaaaaagatgaaagaaatattgtctttc 77930

                           
Query: 491   cagaaagaaaaacc 504
             ||||||||| ||||
Sbjct: 77929 cagaaagaagaacc 77916



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77879 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77820

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 77819 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 77768

to top

>gb|DQ069421.1| Acorus americanus ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  299 bits (151), Expect = 6e-78
 Identities = 315/369 (85%), Gaps = 3/369 (0%)
 Strand = Plus / Minus

                                                                       
Query: 63  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
           |||||| ||||||||||  ||||||||||| || |||||||| | ||||||||||   ||
Sbjct: 366 taatacctcaggagctagggaaactattttagtgaaattcaaatgtctcaattcccgagc 307

                                                                       
Query: 123 aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
            ||||| ||||||||||||||||||||||| || |||| ||||||||| | ||| || ||
Sbjct: 306 gatcgcaccaaaaactcgagttccttttggattcccttcttgatcaatgacaactgctgc 247

                                                                       
Query: 183 attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 242
           |||||||||||| || ||||| |||||||  || | ||||| ||||||||||||||||||
Sbjct: 246 attgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtac 187

                                                                       
Query: 243 aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 302
           |||||||||||  |  ||||| ||||||||||||| ||| | ||| | ||| ||||||||
Sbjct: 186 aattacagctctgaccacttctgatctttctagagacatattgggtactgcttctttgat 127

                                                                       
Query: 303 tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 362
           ||||||||||||||| ||||||||| ||||||||||  ||||||     |||||||||| 
Sbjct: 126 tacagcaacaataacgtcaccaatatgagcatatcggcgattac---tggctcctatgat 70

                                                                       
Query: 363 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 422
           ||||||||||||||||| |||||| || || || || |||||||||||||||||||||||
Sbjct: 69  tcgaatacacatcaattctcgagccccgctgttatccgctacatttaaaagggtctgagg 10

                    
Query: 423 ttgaatcat 431
           |||||||||
Sbjct: 9   ttgaatcat 1

to top

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  299 bits (151), Expect = 6e-78
 Identities = 324/381 (85%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||| || |||||||||||||||||||| |||||||| || | |||||||||  
Sbjct: 80082 tttataatacctcgggagctaatgaaactattttagtaaaattgaactgtctcaattctc 80141

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||||||||| |||||||| |||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 80142 gggcaatcgcaccaaaaacgcgagttccttttggatttccttcttgatcaatcacaactg 80201

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             |||||||||||||||| || ||||| |||||||  || | ||| | ||||||||| ||||
Sbjct: 80202 cagcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtac 80261

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             | |||||||||||||  |  ||||| ||||||||||||||||| |  || | ||||||||
Sbjct: 80262 ggacaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtctt 80321

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 80322 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 80378

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| |||||| || || || ||||||||||| ||| ||||||
Sbjct: 80379 tgattcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtct 80438

                                  
Query: 419   gaggttgaatcatattatttt 439
             ||||||||||||||| |||||
Sbjct: 80439 gaggttgaatcatatcatttt 80459

to top

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  299 bits (151), Expect = 6e-78
 Identities = 318/373 (85%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82305 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82364

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||| || || ||||||| ||||||||| ||||| || |||| ||||||||| | ||| |
Sbjct: 82365 gggcgattgcaccaaaaattcgagttccctttggatttccttcttgatcaataacaactg 82424

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             |||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82425 cagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggtac 82484

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82485 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82544

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82545 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82601

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82602 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82661

                          
Query: 419   gaggttgaatcat 431
             |||||||||||||
Sbjct: 82662 gaggttgaatcat 82674



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 624   tactccccccatttcataaagtat 647
             |||||| |||||||||||||||||
Sbjct: 82882 tactccacccatttcataaagtat 82905

to top

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  299 bits (151), Expect = 6e-78
 Identities = 318/373 (85%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82317 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82376

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||| || || ||||||| ||||||||| ||||| || |||| ||||||||| | ||| |
Sbjct: 82377 gggcgattgcaccaaaaattcgagttccctttggatttccttcttgatcaataacaactg 82436

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             |||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82437 cagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggtac 82496

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82497 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82556

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82557 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82613

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82614 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82673

                          
Query: 419   gaggttgaatcat 431
             |||||||||||||
Sbjct: 82674 gaggttgaatcat 82686



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 624   tactccccccatttcataaagtat 647
             |||||| |||||||||||||||||
Sbjct: 82894 tactccacccatttcataaagtat 82917

to top

>gb|DQ069423.1| Nuphar advena ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  291 bits (147), Expect = 1e-75
 Identities = 314/369 (85%), Gaps = 3/369 (0%)
 Strand = Plus / Minus

                                                                       
Query: 63  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
           ||||||||| ||||||||||| ||||| || || ||||| || | |||||||||    ||
Sbjct: 366 taatacttcgggagctaatgagactatcttagtgaaatttaactgtctcaattcacgagc 307

                                                                       
Query: 123 aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
           |||||  |||||||||||||| |||||||| || |||| ||||||||| | ||| || ||
Sbjct: 306 aatcgaaccaaaaactcgagtgccttttggatttccttcttgatcaatgacaactgctgc 247

                                                                       
Query: 183 attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 242
           |||||||||||| || ||||| |||||||  |||| ||||| ||||||||||||||||||
Sbjct: 246 attgtcatcataccgtattatcataccgttgtcgcgtttgagttctttacatgtacgtac 187

                                                                       
Query: 243 aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 302
           |||||||||||  |||||||| |||||||| || ||||| |  |||| ||| ||||||||
Sbjct: 186 aattacagctctgattacttctgatctttccaggggcatatttggcactgcttctttgat 127

                                                                       
Query: 303 tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 362
           ||||||||||||||| ||||| ||| |||||||||| | |||||    ||||||||||| 
Sbjct: 126 tacagcaacaataacgtcaccgatatgagcatatcggtaattac---tagctcctatgat 70

                                                                       
Query: 363 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 422
           |||||||||||||| |||||||||||| || ||||| |||||||| ||| ||||||||||
Sbjct: 69  tcgaatacacatcagttttcgagctccgctgttgtccgctacattcaaatgggtctgagg 10

                    
Query: 423 ttgaatcat 431
           |||||||||
Sbjct: 9   ttgaatcat 1

to top

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  291 bits (147), Expect = 1e-75
 Identities = 323/381 (84%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||| || |||||||||||||||||||| |||||||| || | |||||||||| 
Sbjct: 82667 tttataatacctccggagctaatgaaactattttagtaaaatttaactgtctcaattccc 82726

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              |||||| || |||||||| |||||||| |||||||| |||| |||||| || | |||||
Sbjct: 82727 gggcaattgcaccaaaaacccgagttccctttgggtttccttcttgatcgatgacaaccg 82786

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             |||||||||||||||| || ||||| |||||||  || | ||||| ||||||||| ||||
Sbjct: 82787 cagcattgtcatcatatcgtattatcataccgttatcacgtttgagttctttacaagtac 82846

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             |||||||||||||||  |  ||||| |||||| |||| ||||| |  |||| ||| ||||
Sbjct: 82847 gtacaattacagctctgaccacttctgatcttgctaggggcatgtttggcactgcttctt 82906

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             |||| |||||||||||||| ||||| ||| ||||||||||  |||| |    ||||||||
Sbjct: 82907 tgatcacagcaacaataacgtcaccgatatgagcatatcgacgattgc---tagctccta 82963

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| |||||| || || || || |||||||| ||||||||||
Sbjct: 82964 tgattcgaatacacatcaattctcgagccccgctgttatccgctacattcaaaagggtct 83023

                                  
Query: 419   gaggttgaatcatattatttt 439
             ||||||||||||||| |||||
Sbjct: 83024 gaggttgaatcatatcatttt 83044

to top

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  291 bits (147), Expect = 1e-75
 Identities = 317/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82452 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82511

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 82512 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 82571

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             ||||||||||||| || || ||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82572 cagcattgtcatcgtatcgtattatcatcccgttgtcacgtttgagttctttacaggtac 82631

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82632 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82691

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82692 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82748

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82749 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82808

                          
Query: 419   gaggttgaatcat 431
             |||||||||||||
Sbjct: 82809 gaggttgaatcat 82821



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 624   tactccccccatttcataaagtat 647
             |||||| |||||||||||||||||
Sbjct: 83025 tactccacccatttcataaagtat 83048

to top

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  291 bits (147), Expect = 1e-75
 Identities = 317/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82449 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82508

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 82509 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 82568

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             ||||||||||||| || || ||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82569 cagcattgtcatcgtatcgtattatcatcccgttgtcacgtttgagttctttacaggtac 82628

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82629 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82688

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82689 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82745

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82746 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82805

                          
Query: 419   gaggttgaatcat 431
             |||||||||||||
Sbjct: 82806 gaggttgaatcat 82818



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 624   tactccccccatttcataaagtat 647
             |||||| |||||||||||||||||
Sbjct: 83022 tactccacccatttcataaagtat 83045

to top

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  289 bits (146), Expect = 6e-75
 Identities = 322/380 (84%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 60    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
             ||||||||| ||||| ||||| ||||||||||| |||||||| || | ||||||||||  
Sbjct: 85542 ttataatacctcaggggctaaggaaactattttagtaaaatttaactgtctcaattcccg 85601

                                                                         
Query: 120   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
             | | ||||| ||||||| |||||||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 85602 gacgatcgcaccaaaaattcgagttccttttgggtttccttcttgatcaataataactgc 85661

                                                                         
Query: 180   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
             ||||||||||||||| || ||||| |||||||  || | ||||| ||||||||| |||||
Sbjct: 85662 agcattgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacaggtacg 85721

                                                                         
Query: 240   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 299
             ||||||||||||||  |||||||| ||||||||||||||||| |  || | | | |||||
Sbjct: 85722 tacaattacagctctgattacttctgatctttctagaggcatatttggtactacttcttt 85781

                                                                         
Query: 300   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 359
             ||| |||||||||||||| ||||||||| |||| |||||  ||||||    || ||||||
Sbjct: 85782 gatcacagcaacaataacgtcaccaatatgagcgtatcggcgattac---tagttcctat 85838

                                                                         
Query: 360   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 419
             || ||||||||||||||||| ||| || || || ||||| |||||||| ||| |||||||
Sbjct: 85839 gattcgaatacacatcaattctcgggccccgctgttgtccgctacattcaaatgggtctg 85898

                                 
Query: 420   aggttgaatcatattatttt 439
              ||||||||||||| |||||
Sbjct: 85899 gggttgaatcatatcatttt 85918



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                         
Query: 559   aattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagtt 618
             |||||| ||||||| ||||||||    |||||||| || ||||||  |||||||| | ||
Sbjct: 86054 aattgagttcgtataggcattttggacgccgctattgaaatagcttttctagctatattt 86113

                                          
Query: 619   tcagatactccccccatttcataaagtat 647
             || | |||||| |||||||||||||||||
Sbjct: 86114 tctgctactccgcccatttcataaagtat 86142

to top

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  287 bits (145), Expect = 2e-74
 Identities = 321/379 (84%), Gaps = 3/379 (0%)
 Strand = Plus / Plus

                                                                         
Query: 61    tataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg 120
             |||||||| ||||| ||||||||||||||||| |||||||| || | |||||||||   |
Sbjct: 80638 tataatacctcaggggctaatgaaactattttagtaaaattgaactgtctcaattctcgg 80697

                                                                         
Query: 121   gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgca 180
             |||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| || 
Sbjct: 80698 gcaatcgcaccaaaaactcgcgttccttttggatttccttcttgatcaatcacaactgcg 80757

                                                                         
Query: 181   gcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgt 240
             |||||||||||||| || ||||| |||||||  || | ||| | ||||||||| ||||| 
Sbjct: 80758 gcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtacgg 80817

                                                                         
Query: 241   acaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttg 300
             |||||||||||||  |  ||||| ||||||||||||||||| |  || | ||||||||||
Sbjct: 80818 acaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtctttg 80877

                                                                         
Query: 301   attacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatg 360
             || |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||||
Sbjct: 80878 atcacagcaacaataacgtcaccaatatgagcatatcggcgattgc---tagctcctatg 80934

                                                                         
Query: 361   actcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctga 420
             | ||||||||||||||||| |||||| || || || ||||||||||| ||| ||||||||
Sbjct: 80935 attcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtctga 80994

                                
Query: 421   ggttgaatcatattatttt 439
             ||||||||||||| |||||
Sbjct: 80995 ggttgaatcatatcatttt 81013



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 624   tactccccccatttcataaagtatacgac 652
             |||||| ||||||||||||||||| ||||
Sbjct: 81203 tactccacccatttcataaagtattcgac 81231

to top

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  287 bits (145), Expect = 2e-74
 Identities = 318/375 (84%), Gaps = 3/375 (0%)
 Strand = Plus / Plus

                                                                         
Query: 57    tatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 116
             ||||||||||||||| ||||||||||| ||||| || || ||||| || | |||||||||
Sbjct: 86608 tatttataatacttcgggagctaatgagactatcttagtgaaatttaactgtctcaattc 86667

                                                                         
Query: 117   ctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataac 176
                 |||||||  ||||||||||| || |||||||| || |||| ||||||||| | |||
Sbjct: 86668 acgagcaatcgaaccaaaaactcgggtgccttttggatttccttcttgatcaatgacaac 86727

                                                                         
Query: 177   cgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgt 236
              || |||||||||||||| |||||||| |||||||  ||||  |||| ||||||||||||
Sbjct: 86728 tgctgcattgtcatcataccggattatcataccgttgtcgcgcttgagttctttacatgt 86787

                                                                         
Query: 237   acgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtc 296
             |||||||||||||||||  |||||||| |||||||| || ||||| |  |||| ||| ||
Sbjct: 86788 acgtacaattacagctctgattacttctgatctttccaggggcatatttggcactgcttc 86847

                                                                         
Query: 297   tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 356
             ||||||||||||||||||||| ||||| ||| |||||||||| | |||||    ||||||
Sbjct: 86848 tttgattacagcaacaataacgtcaccgatatgagcatatcggtaattac---tagctcc 86904

                                                                         
Query: 357   tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 416
             ||||| |||||||||||| | |||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 86905 tatgattcgaatacacataagttttcgggctccgctgttgtccgctacattcaaaagggt 86964

                            
Query: 417   ctgaggttgaatcat 431
             |||||||||||||||
Sbjct: 86965 ctgaggttgaatcat 86979



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 598   atagctgctctagctacagtttcagatactccccccatttcataaagtat 647
             ||||| ||||| ||||| ||||| |||||||| |||||||||||||||||
Sbjct: 87172 atagcggctctggctacggtttctgatactccgcccatttcataaagtat 87221

to top

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  287 bits (145), Expect = 2e-74
 Identities = 321/379 (84%), Gaps = 3/379 (0%)
 Strand = Plus / Plus

                                                                         
Query: 61    tataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg 120
             |||||||| ||||| ||||||||||||||||| |||||||| || | |||||||||   |
Sbjct: 80636 tataatacctcaggggctaatgaaactattttagtaaaattgaactgtctcaattctcgg 80695

                                                                         
Query: 121   gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgca 180
             |||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| || 
Sbjct: 80696 gcaatcgcaccaaaaactcgcgttccttttggatttccttcttgatcaatcacaactgcg 80755

                                                                         
Query: 181   gcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgt 240
             |||||||||||||| || ||||| |||||||  || | ||| | ||||||||| ||||| 
Sbjct: 80756 gcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtacgg 80815

                                                                         
Query: 241   acaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttg 300
             |||||||||||||  |  ||||| ||||||||||||||||| |  || | ||||||||||
Sbjct: 80816 acaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtctttg 80875

                                                                         
Query: 301   attacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatg 360
             || |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||||
Sbjct: 80876 atcacagcaacaataacgtcaccaatatgagcatatcggcgattgc---tagctcctatg 80932

                                                                         
Query: 361   actcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctga 420
             | ||||||||||||||||| |||||| || || || ||||||||||| ||| ||||||||
Sbjct: 80933 attcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtctga 80992

                                
Query: 421   ggttgaatcatattatttt 439
             ||||||||||||| |||||
Sbjct: 80993 ggttgaatcatatcatttt 81011



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 624   tactccccccatttcataaagtatacgac 652
             |||||| ||||||||||||||||| ||||
Sbjct: 81201 tactccacccatttcataaagtattcgac 81229

to top

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  285 bits (144), Expect = 9e-74
 Identities = 323/382 (84%), Gaps = 3/382 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||||||||| |||||||||| |||||| || ||||| || | |||||||||  
Sbjct: 82960 tttataatacttcaggtgctaatgaaattatttttgtgaaatttaactgtctcaattctc 83019

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | |||||
Sbjct: 83020 gggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaaccg 83079

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             |||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| ||||
Sbjct: 83080 cagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagtac 83139

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             |||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  |
Sbjct: 83140 gtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttct 83199

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             ||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| ||||
Sbjct: 83200 tgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagccccta 83256

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| |
Sbjct: 83257 tgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggttt 83316

                                   
Query: 419   gaggttgaatcatattattttg 440
             ||||||||||||||||||||||
Sbjct: 83317 gaggttgaatcatattattttg 83338

to top

>gb|AF441853.1|AF441853 Cucumis sativus RBL1 mRNA, complete cds; chloroplast gene for
           chloroplast product
          Length = 703

 Score =  285 bits (144), Expect = 9e-74
 Identities = 323/382 (84%), Gaps = 3/382 (0%)
 Strand = Plus / Minus

                                                                       
Query: 59  tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
           |||||||||||||||| |||||||||| |||||| || ||||| || | |||||||||  
Sbjct: 436 tttataatacttcaggtgctaatgaaattatttttgtgaaatttaactgtctcaattctc 377

                                                                       
Query: 119 cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
            ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | |||||
Sbjct: 376 gggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaaccg 317

                                                                       
Query: 179 cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
           |||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| ||||
Sbjct: 316 cagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagtac 257

                                                                       
Query: 239 gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
           |||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  |
Sbjct: 256 gtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttct 197

                                                                       
Query: 299 tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
           ||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| ||||
Sbjct: 196 tgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagccccta 140

                                                                       
Query: 359 tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
           ||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| |
Sbjct: 139 tgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggttt 80

                                 
Query: 419 gaggttgaatcatattattttg 440
           ||||||||||||||||||||||
Sbjct: 79  gaggttgaatcatattattttg 58

to top

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  285 bits (144), Expect = 9e-74
 Identities = 323/382 (84%), Gaps = 3/382 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||||||||| |||||||||| |||||| || ||||| || | |||||||||  
Sbjct: 83188 tttataatacttcaggtgctaatgaaattatttttgtgaaatttaactgtctcaattctc 83247

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | |||||
Sbjct: 83248 gggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaaccg 83307

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             |||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| ||||
Sbjct: 83308 cagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagtac 83367

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             |||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  |
Sbjct: 83368 gtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttct 83427

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             ||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| ||||
Sbjct: 83428 tgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagccccta 83484

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| |
Sbjct: 83485 tgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggttt 83544

                                   
Query: 419   gaggttgaatcatattattttg 440
             ||||||||||||||||||||||
Sbjct: 83545 gaggttgaatcatattattttg 83566

to top

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  283 bits (143), Expect = 4e-73
 Identities = 316/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82940 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82999

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83000 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83059

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             |||||||||||||||| || |||||||| ||||  || | ||||| ||||||||| || |
Sbjct: 83060 cagcattgtcatcatatcgtattattatcccgttgtcacgtttgagttctttacaggtcc 83119

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || ||||
Sbjct: 83120 gcacaattacagctctgactacttctgatctttctaggggcatatttggtatggcttctt 83179

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83180 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83236

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83237 tgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtct 83296

                          
Query: 419   gaggttgaatcat 431
             |||||||||||||
Sbjct: 83297 gaggttgaatcat 83309



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 624   tactccccccatttcataaagtatacgac 652
             |||||| ||||||||||||||||| ||||
Sbjct: 83517 tactccacccatttcataaagtattcgac 83545

to top

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  276 bits (139), Expect = 9e-71
 Identities = 315/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 83177 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 83236

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83237 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83296

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             |||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| || |
Sbjct: 83297 cagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggtcc 83356

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || ||||
Sbjct: 83357 gcacaattacagctctgactacttctgatctttctaggggcatatttggtacggcttctt 83416

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83417 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83473

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83474 tgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtct 83533

                          
Query: 419   gaggttgaatcat 431
             |||||||||||||
Sbjct: 83534 gaggttgaatcat 83546



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 624   tactccccccatttcataaagtatacgac 652
             |||||| ||||||||||||||||| ||||
Sbjct: 83749 tactccacccatttcataaagtattcgac 83777

to top

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  276 bits (139), Expect = 9e-71
 Identities = 317/375 (84%), Gaps = 6/375 (1%)
 Strand = Plus / Plus

                                                                         
Query: 60    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
             ||||||||| ||||||||||||||||||||||| | ||| ||   || || |||||||  
Sbjct: 79239 ttataatacctcaggagctaatgaaactattttcgcaaattt---ttgtcgcaattcccg 79295

                                                                         
Query: 120   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
             |||||| || ||||||| ||||||||||||||| || |||| ||||||||| ||||| ||
Sbjct: 79296 ggcaattgcaccaaaaattcgagttccttttggatttccttcttgatcaatgataactgc 79355

                                                                         
Query: 180   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
             ||||||||||||||| || ||||| |||||||  |||| ||| | ||||||||| |||||
Sbjct: 79356 agcattgtcatcatatcgtattatcataccgttgtcgcgttttagttctttacaagtacg 79415

                                                                         
Query: 240   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 299
             ||||| ||||||||  || ||||| ||||||||||  ||| | | ||| | ||| |||||
Sbjct: 79416 tacaactacagctctgatcacttctgatctttctaagggcgtgttggggattgcttcttt 79475

                                                                         
Query: 300   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 359
             ||| |||||||||||||| ||||||||||||||||||||  | || |    |||||||||
Sbjct: 79476 gatcacagcaacaataacgtcaccaatacgagcatatcgacggttgc---tagctcctat 79532

                                                                         
Query: 360   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 419
             || ||||||||||||||||| |||||| || || |||||||||||||| ||| |||||||
Sbjct: 79533 gattcgaatacacatcaattctcgagccccgctgttgtctgctacattcaaatgggtctg 79592

                            
Query: 420   aggttgaatcatatt 434
             |||||||||||||||
Sbjct: 79593 aggttgaatcatatt 79607

to top

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  276 bits (139), Expect = 9e-71
 Identities = 315/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 83420 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 83479

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83480 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83539

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             |||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 83540 cagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggtac 83599

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             | |||||||||||||  | || ||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 83600 gcacaattacagctctgactatttctgatctttctaggggcatatttggtactgcttctt 83659

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83660 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83716

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| |||||||||||| |||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83717 tgattcgaatacacattaattctcgagccccgctgttatccgctacatttaaatgggtct 83776

                          
Query: 419   gaggttgaatcat 431
             |||||||||||||
Sbjct: 83777 gaggttgaatcat 83789



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 624   tactccccccatttcataaagtatacgac 652
             |||||| ||||||||||||||||| ||||
Sbjct: 83997 tactccacccatttcataaagtattcgac 84025

to top

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  276 bits (139), Expect = 9e-71
 Identities = 315/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 83175 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 83234

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83235 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83294

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             |||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| || |
Sbjct: 83295 cagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggtcc 83354

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || ||||
Sbjct: 83355 gcacaattacagctctgactacttctgatctttctaggggcatatttggtacggcttctt 83414

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83415 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83471

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| ||||||||||||||||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83472 tgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtct 83531

                          
Query: 419   gaggttgaatcat 431
             |||||||||||||
Sbjct: 83532 gaggttgaatcat 83544



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 624   tactccccccatttcataaagtatacgac 652
             |||||| ||||||||||||||||| ||||
Sbjct: 83747 tactccacccatttcataaagtattcgac 83775

to top

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  274 bits (138), Expect = 3e-70
 Identities = 314/372 (84%), Gaps = 3/372 (0%)
 Strand = Plus / Plus

                                                                         
Query: 60    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
             ||||||||| || |||||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 85087 ttataatacctcgggagctaatgaaactattttagtgaaatttaactgtctcaattcccg 85146

                                                                         
Query: 120   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
             ||| ||||| ||||||| ||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 85147 ggcgatcgcaccaaaaattcgagttccttttggatttccttcttgatcaatgacaacggc 85206

                                                                         
Query: 180   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
             ||||||||||||||| || ||||| || ||||  |||| ||||| ||||||||  |||||
Sbjct: 85207 agcattgtcatcatatcgtattatcatcccgttgtcgcgtttgagttctttacgagtacg 85266

                                                                         
Query: 240   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 299
             ||||||||||||||  || ||||| ||||||||||||||  | |  || | ||| || ||
Sbjct: 85267 tacaattacagctctgatcacttctgatctttctagaggtgtatttggtactgcttcctt 85326

                                                                         
Query: 300   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 359
             ||| |||||||||||||| ||||||||| ||||||||||  ||||||    |||||||||
Sbjct: 85327 gatcacagcaacaataacgtcaccaatatgagcatatcggcgattac---tagctcctat 85383

                                                                         
Query: 360   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 419
             |||||||||||||||||||| ||| || || || || ||||||||||| ||| |||||||
Sbjct: 85384 gactcgaatacacatcaattctcgggccccgctgttatctgctacattcaaatgggtctg 85443

                         
Query: 420   aggttgaatcat 431
             ||||||||||||
Sbjct: 85444 aggttgaatcat 85455

to top

>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22
            for ribosomal proteins S3, S19, L14, L16 and L22
          Length = 4102

 Score =  254 bits (128), Expect = 3e-64
 Identities = 317/378 (83%), Gaps = 9/378 (2%)
 Strand = Plus / Minus

                                                                        
Query: 60   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
            ||||||||| ||||||||||||||||||||||| | ||| ||   || || |||||||  
Sbjct: 3697 ttataatacctcaggagctaatgaaactattttcgcaaattt---ttgtcgcaattcccg 3641

                                                                        
Query: 120  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc-- 177
            |||||| || ||||||| ||||||||||||||| || |||| ||||||||| |||||   
Sbjct: 3640 ggcaattgcaccaaaaattcgagttccttttggatttccttcttgatcaatgataacaac 3581

                                                                        
Query: 178  -gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgt 236
             ||||||||||||||||| || ||||| |||||||  |||| ||| | ||||||||| ||
Sbjct: 3580 tgcagcattgtcatcatatcgtattatcataccgttgtcgcgttttagttctttacaagt 3521

                                                                        
Query: 237  acgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtc 296
            |||||||| ||||||||  || ||||| ||||||||||  ||| | | ||| | ||| ||
Sbjct: 3520 acgtacaactacagctctgatcacttctgatctttctaagggcgtgttggggattgcttc 3461

                                                                        
Query: 297  tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 356
            |||||| |||||||||||||| ||||||||||||||||||||  | || |    ||||||
Sbjct: 3460 tttgatcacagcaacaataacgtcaccaatacgagcatatcgacggttgc---tagctcc 3404

                                                                        
Query: 357  tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 416
            ||||| ||||||||||||||||| |||||| || || |||||||||||||| ||| ||||
Sbjct: 3403 tatgattcgaatacacatcaattctcgagccccgctgttgtctgctacattcaaatgggt 3344

                              
Query: 417  ctgaggttgaatcatatt 434
            ||||||||||||||||||
Sbjct: 3343 ctgaggttgaatcatatt 3326

to top

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
             strain:Columbia
          Length = 154478

 Score =  250 bits (126), Expect = 5e-63
 Identities = 317/380 (83%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 60    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
             ||||||||| ||||||||||||||||||||||| ||||| || |||| ||||||||||  
Sbjct: 80696 ttataatacctcaggagctaatgaaactattttagtaaagtttaattgtctcaattcccg 80755

                                                                         
Query: 120   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
              |  ||||| ||||||||||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 80756 tgggatcgccccaaaaactcgagttccttttggatttccttcttgatcaatgacaactgc 80815

                                                                         
Query: 180   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
              |||||||||||||| || |||||  | || |  |  | ||||| ||||||||| |||||
Sbjct: 80816 ggcattgtcatcatatcgtattatcgtcccattgttacgtttgagttctttacaagtacg 80875

                                                                         
Query: 240   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 299
             |||||||||||||| ||| ||||| ||||||||||||||  | |  || | ||| |||||
Sbjct: 80876 tacaattacagctctaatcacttctgatctttctagaggagtatttggtattgcttcttt 80935

                                                                         
Query: 300   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 359
             |||||||||||||||||| ||||||||| ||||||||||  ||||||    |||||||||
Sbjct: 80936 gattacagcaacaataacgtcaccaatatgagcatatcggcgattac---tagctcctat 80992

                                                                         
Query: 360   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 419
              | ||||||||||||||||| || ||| || || |||||||||||||| |||  ||| ||
Sbjct: 80993 tattcgaatacacatcaattctctagccccgctgttgtctgctacattcaaataggtttg 81052

                                 
Query: 420   aggttgaatcatattatttt 439
              ||||||||||||| |||||
Sbjct: 81053 tggttgaatcatatcatttt 81072

to top

>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0026A08
          Length = 171272

 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                        
Query: 159  tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 218
            |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 4998 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 4939

                                                                        
Query: 219  tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 278
            |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 4938 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 4879

                                                              
Query: 279  catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 328
            ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4878 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 4829

to top

>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091M20
          Length = 132976

 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                         
Query: 159   tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 218
             |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 88345 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 88286

                                                                         
Query: 219   tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 278
             |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 88285 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 88226

                                                               
Query: 279   catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 328
             ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 88225 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 88176

to top

>gb|DQ069424.1| Ranunculus macranthus ribosomal protein L14 (rpl14) gene, partial
           cds; chloroplast
          Length = 366

 Score =  238 bits (120), Expect = 2e-59
 Identities = 310/370 (83%), Gaps = 5/370 (1%)
 Strand = Plus / Minus

                                                                       
Query: 63  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg-g 121
           |||||||||||| ||||||||||||||||| ||||||||||| | |||||| || ||| |
Sbjct: 366 taatacttcaggggctaatgaaactattttagtaaaattcaactgtctcaactc-tcgag 308

                                                                       
Query: 122 caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 181
           | || || ||||||||||||||||||||||| || |||| ||||||||| | ||| || |
Sbjct: 307 cgattgcaccaaaaactcgagttccttttggatttccttcttgatcaatgacaactgctg 248

                                                                       
Query: 182 cattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgta 241
           |||||||||||||  | ||||| ||||| |  || | ||||| ||||||||| || ||||
Sbjct: 247 cattgtcatcatattgtattatcataccattgtcacgtttgagttctttacacgtgcgta 188

                                                                       
Query: 242 caattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttga 301
           ||||||||||||  || ||||| ||||||| ||||||||| | ||| | ||| |||||||
Sbjct: 187 caattacagctctgatcacttctgatctttgtagaggcatattgggaactgcttctttga 128

                                                                       
Query: 302 ttacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatga 361
           |||| ||||||||||| || |||||| ||||||| ||  ||||||    |||||||||||
Sbjct: 127 ttaccgcaacaataacgtcgccaatatgagcataacgtcgattac---tagctcctatga 71

                                                                       
Query: 362 ctcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgag 421
            || ||||||||| ||||||| ||| || || ||||| ||||||||||||  ||||||||
Sbjct: 70  ttctaatacacattaattttctagccccgctgttgtccgctacatttaaataggtctgag 11

                     
Query: 422 gttgaatcat 431
           ||||||||||
Sbjct: 10  gttgaatcat 1

to top

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  234 bits (118), Expect = 3e-58
 Identities = 306/368 (83%), Gaps = 3/368 (0%)
 Strand = Plus / Plus

                                                                         
Query: 64    aatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggca 123
             ||||| || ||||||||||| ||||| || || |||||||| | |||||||||| | || 
Sbjct: 87322 aatacctcgggagctaatgatactatcttagtgaaattcaaatgtctcaattccccagcg 87381

                                                                         
Query: 124   atcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagca 183
             ||||  ||||| ||||||||||||||||| || || | | ||||||| | ||| || |||
Sbjct: 87382 atcgaaccaaagactcgagttccttttggatttccctctggatcaataacaactgctgca 87441

                                                                         
Query: 184   ttgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtaca 243
             ||||||||||| || |||||||||||||  || | ||||| |||||||||||||||||||
Sbjct: 87442 ttgtcatcatatcgtattattataccgttgtcacgtttgagttctttacatgtacgtaca 87501

                                                                         
Query: 244   attacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgatt 303
             ||||||||||  || ||||| |||||||| || ||||| | ||| | ||| |||||||||
Sbjct: 87502 attacagctctgatcacttctgatctttccaggggcatattgggtactgcttctttgatt 87561

                                                                         
Query: 304   acagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgact 363
             |||||||||||||| ||||||||| ||||||||||  | ||||    |||||||| || |
Sbjct: 87562 acagcaacaataacgtcaccaatatgagcatatcgggggttac---tagctcctacgatt 87618

                                                                         
Query: 364   cgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggt 423
             |||||||||||||||| |||||| || || ||||| |||||||| |||  ||| |||| |
Sbjct: 87619 cgaatacacatcaattctcgagccccgctgttgtccgctacattcaaataggtttgagct 87678

                     
Query: 424   tgaatcat 431
             ||||||||
Sbjct: 87679 tgaatcat 87686



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                    
Query: 598   atagctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             ||||||||||| || |||||||| |  ||||| |||||||||| |||||| ||||
Sbjct: 87859 atagctgctctggcgacagtttctggcactccgcccatttcatgaagtattcgac 87913

to top

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete
             sequence
          Length = 163935

 Score =  234 bits (118), Expect = 3e-58
 Identities = 315/380 (82%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 60    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
             ||||||||| ||||| ||||||||||||||||| || ||| | || ||||||||||| | 
Sbjct: 85802 ttataatacctcaggtgctaatgaaactattttagtgaaacttaactctctcaattcgtg 85861

                                                                         
Query: 120   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
             ||||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 85862 ggcaatcgcaccaaaaactcgggttccttttggatttccttcttgatcaatgacaacagc 85921

                                                                         
Query: 180   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
             ||||||||||||||| || ||||| |||||||| || ||||| | ||||||||| |||||
Sbjct: 85922 agcattgtcatcatatcgtattatgataccgtcgtcacatttaagttctttacaagtacg 85981

                                                                         
Query: 240   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 299
             ||||||||||||||  |  ||||| ||||||||||| |   |    || ||||| || ||
Sbjct: 85982 tacaattacagctctgaccacttctgatctttctagggaggtgcttggtaatgcttcctt 86041

                                                                         
Query: 300   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 359
             ||| |||||||||||||  ||||| ||| ||||||||||  ||||||    |||||| ||
Sbjct: 86042 gatcacagcaacaataatgtcaccgatatgagcatatcgacgattac---tagctccgat 86098

                                                                         
Query: 360   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 419
             || |||||||||||| |||| |||||| ||||| || || || ||||| ||| |||| ||
Sbjct: 86099 gattcgaatacacattaattctcgagccccactgttatccgcgacattcaaacgggtttg 86158

                                 
Query: 420   aggttgaatcatattatttt 439
             |||||||||||||| |||||
Sbjct: 86159 aggttgaatcatatcatttt 86178

to top

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  218 bits (110), Expect = 2e-53
 Identities = 313/380 (82%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 60    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
             ||||||||| ||||| ||||||||||||||||| || ||||| || | |||||||||   
Sbjct: 85487 ttataatacctcaggtgctaatgaaactattttagtgaaatttaactgtctcaattctcg 85546

                                                                         
Query: 120   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
             ||||||||| ||||||||||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 85547 ggcaatcgcaccaaaaactcgagttccttttggatttccttcttgatcaatcacaactgc 85606

                                                                         
Query: 180   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
             |||||| |||||||| || ||||| |||||||  || | ||| | ||||||||| |||||
Sbjct: 85607 agcattatcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtacg 85666

                                                                         
Query: 240   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 299
             ||||||||||||||  || || || ||||||||||||||  | |  || ||||| || ||
Sbjct: 85667 tacaattacagctctgatcacctctgatctttctagaggtgtgtttggtaatgcttcctt 85726

                                                                         
Query: 300   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 359
             ||| |||||||||||||  ||||| ||| ||||||||||  ||||||    |||||||||
Sbjct: 85727 gatcacagcaacaataatgtcaccgatatgagcatatcggcgattac---tagctcctat 85783

                                                                         
Query: 360   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 419
             || || ||||||||| |||| ||| || || || || || |||||||| ||| || | ||
Sbjct: 85784 gattctaatacacattaattctcgggccccgctgttatccgctacattcaaatggctttg 85843

                                 
Query: 420   aggttgaatcatattatttt 439
             |||||||||||||| |||||
Sbjct: 85844 aggttgaatcatatcatttt 85863



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                         
Query: 555   aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 614
             |||||||||| ||||||| ||||||||    |||||||| || |||||   ||| |||| 
Sbjct: 85998 aataaattgagttcgtataggcattttggacgccgctattgaaatagcctttctggctat 86057

                                                   
Query: 615   agtttcagatactccccccatttcataaagtatacgac 652
             | |||| | |||||| ||||||||||||||||| ||||
Sbjct: 86058 attttctgctactccgcccatttcataaagtattcgac 86095

to top

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  216 bits (109), Expect = 7e-53
 Identities = 312/377 (82%), Gaps = 7/377 (1%)
 Strand = Plus / Plus

                                                                         
Query: 60    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
             ||||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||  
Sbjct: 79787 ttataatacttcaggagctaatgaaactattttagtaaagtttaattgtctcaattcccg 79846

                                                                         
Query: 120   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
              |  ||||| |||||||| |||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 79847 tgggatcgccccaaaaacgcgagttccttttggatttccttcttgatcaatgacaactgc 79906

                                                                         
Query: 180   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
              |||||||| ||||| || |||||  | || |  |  | ||||| ||||||||| |||||
Sbjct: 79907 ggcattgtcgtcatatcgtattatcgtcccattcttacgtttgagttctttacaagtacg 79966

                                                                         
Query: 240   tacaattacagctcgaattacttcggatctttctagag--gcatttggggcaatgcgtct 297
             ||||||||||||||  |  ||||| |||||||||||||  | |||||||  | ||| || 
Sbjct: 79967 tacaattacagctctgaccacttctgatctttctagagtagtatttggg--attgcttcc 80024

                                                                         
Query: 298   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 357
             |||||||||||||||||||| ||||||||| ||||||| ||  ||||||    |||||||
Sbjct: 80025 ttgattacagcaacaataacgtcaccaatatgagcatagcggcgattac---tagctcct 80081

                                                                         
Query: 358   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 417
             || | |||||||||||||||||||| ||| || || |||||||||||||| |||  ||| 
Sbjct: 80082 attattcgaatacacatcaattttctagccccgctgttgtctgctacattcaaataggtt 80141

                              
Query: 418   tgaggttgaatcatatt 434
             || ||||||||||||||
Sbjct: 80142 tgtggttgaatcatatt 80158

to top

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  212 bits (107), Expect = 1e-51
 Identities = 313/381 (82%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||  ||||| ||||||||||||||||| || ||||| || | |||||||||| 
Sbjct: 78574 tttataatatctcaggcgctaatgaaactattttagtgaaattgaactgtctcaattccc 78633

                                                                         
Query: 119   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 178
              ||| || |||| ||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 78634 gggcgattgcgcaaaaaattcgagttccttttggatttccttcttgatcaatgacaactg 78693

                                                                         
Query: 179   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 238
             ||||||| ||||||||  | ||||||||||| |     | ||||| ||||||||| ||||
Sbjct: 78694 cagcattatcatcatactgtattattataccattgctacgtttgagttctttacaagtac 78753

                                                                         
Query: 239   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 298
             |||||||||||||||  || ||||| ||||||||||  ||  | |  || | ||| ||||
Sbjct: 78754 gtacaattacagctctgatcacttctgatctttctaagggtgtattcggtactgcttctt 78813

                                                                         
Query: 299   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 358
             ||||||||||||||| ||  |||||||||  ||| |||||  |||||| |||   |||||
Sbjct: 78814 tgattacagcaacaacaatgtcaccaatataagcgtatcgtcgattactagc---tccta 78870

                                                                         
Query: 359   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 418
             ||| |||||||||||||||||| || ||||| ||||| || |||||||||||| |||| |
Sbjct: 78871 tgattcgaatacacatcaatttgcgggctccgctattatcggctacatttaaatgggttt 78930

                                  
Query: 419   gaggttgaatcatattatttt 439
             ||||||||||||||| |||||
Sbjct: 78931 gaggttgaatcatatcatttt 78951

to top

>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score =  210 bits (106), Expect = 4e-51
 Identities = 277/334 (82%), Gaps = 15/334 (4%)
 Strand = Plus / Minus

                                                                         
Query: 50    ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctc 109
             |||||||||||| |||||| ||||||||| |||| ||| |||| || |||||||    ||
Sbjct: 99133 ctactagtatttttaatacctcaggagctcatgagactcttttagtgaaattcataagtc 99074

                                                                         
Query: 110   tcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaa 169
             ||||||||   || ||||| ||||||||||||||||||||||| || |||| ||||||||
Sbjct: 99073 tcaattcccgagcgatcgcaccaaaaactcgagttccttttggatttccttcttgatcaa 99014

                                                                         
Query: 170   ttataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctt 229
             | | |||||        |||||||| || ||||| |||||||  || | ||||| |||||
Sbjct: 99013 tgacaaccg--------tcatcatatcgtattatcataccgttgtcacgtttgagttctt 98962

                                                                         
Query: 230   tacatgtacgtacaattacagctcgaattacttcgg----atctttctagaggcatttgg 285
             |||||||||||||||||||||||||  ||||||| |    |||||||||||||||||| |
Sbjct: 98961 tacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcattttg 98902

                                                                         
Query: 286   ggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgatta 345
             |||| ||| ||||||||||||||||||||||| ||||||||| |||||||||  ||||||
Sbjct: 98901 ggcactgcttctttgattacagcaacaataacgtcaccaatatgagcatatcagtgatta 98842

                                               
Query: 346   ccagcagctcctatgactcgaatacacatcaatt 379
             |   ||||||||| || ||||||||| |||||||
Sbjct: 98841 c---cagctcctaagattcgaatacatatcaatt 98811

to top

>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA
          Length = 1368

 Score =  194 bits (98), Expect = 3e-46
 Identities = 104/106 (98%)
 Strand = Plus / Minus

                                                                        
Query: 234  tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 293
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1365 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 1306

                                                          
Query: 294  gtctttgattacagcaacaataacatcaccaatacgagcatatcgc 339
            ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1305 gtctttgattacagcaataataacatcaccaatacgagcatatcgc 1260



 Score =  180 bits (91), Expect = 4e-42
 Identities = 115/123 (93%)
 Strand = Plus / Minus

                                                                        
Query: 530  ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 589
            |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 1068 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 1009

                                                                        
Query: 590  ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 649
            |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 1008 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 949

               
Query: 650  gac 652
            |||
Sbjct: 948  gac 946



 Score =  161 bits (81), Expect = 4e-36
 Identities = 101/105 (96%), Gaps = 2/105 (1%)
 Strand = Plus / Minus

                                                                        
Query: 400  gctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttca 459
            ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 1199 gctacatttaaaagggtctgaggttgaatcatattatttgg-tttccatttgttatttca 1141

                                                         
Query: 460  a-tgcaaaaggatgaaagaaatattgtctttccagaaagaaaaac 503
            | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 aatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaac 1096



 Score =  107 bits (54), Expect = 5e-20
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                        
Query: 278  gcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcatatc 337
            |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1261 gcatttggggcactgcgtctttgattacagcaataataacatcaccaatacgagcatatc 1202

              
Query: 338  gc 339
            ||
Sbjct: 1201 gc 1200

to top

>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0229B10
          Length = 114509

 Score =  186 bits (94), Expect = 6e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 63    taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
             |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 54859 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 54918

                                                                         
Query: 123   aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
              || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 54919 gattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 54977

                                                       
Query: 183   attgtcatcatagcggattattataccgtcttcgcatttgaa 224
             |||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 54978 attgttgtcatagcgtattattataccgtcttcgcatttgaa 55019

to top

>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0569E11
          Length = 157319

 Score =  186 bits (94), Expect = 6e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                          
Query: 63     taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
              |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 137662 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 137721

                                                                          
Query: 123    aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
               || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 137722 gattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 137780

                                                        
Query: 183    attgtcatcatagcggattattataccgtcttcgcatttgaa 224
              |||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 137781 attgttgtcatagcgtattattataccgtcttcgcatttgaa 137822

to top

>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091C18
          Length = 154416

 Score =  186 bits (94), Expect = 6e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                          
Query: 63     taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
              |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 130073 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattcctcggc 130132

                                                                          
Query: 123    aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
               || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 130133 cattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 130191

                                                        
Query: 183    attgtcatcatagcggattattataccgtcttcgcatttgaa 224
              | |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 130192 actgttgtcatagcgtattattataccgtcttcgcatttgaa 130233

to top

>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1770_H03
          Length = 189893

 Score =  186 bits (94), Expect = 6e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 63    taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
             |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 66843 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattcctcggc 66902

                                                                         
Query: 123   aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
              || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 66903 cattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 66961

                                                       
Query: 183   attgtcatcatagcggattattataccgtcttcgcatttgaa 224
             | |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 66962 actgttgtcatagcgtattattataccgtcttcgcatttgaa 67003

to top

>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion,
              complete genome
          Length = 491515

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 130    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 189
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 331098 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 331047

                                                                          
Query: 190    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 249
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 331046 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330987

                                                                          
Query: 250    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 305
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330986 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330927

                                                                          
Query: 306    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 365
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330926 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330870

                            
Query: 366    aatacacatcaatt 379
              |||||| |||||||
Sbjct: 330869 aatacatatcaatt 330856



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 50     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 103
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 331166 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 331113

to top

>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion,
              complete genome
          Length = 490673

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 130    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 189
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330288 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330237

                                                                          
Query: 190    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 249
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330236 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330177

                                                                          
Query: 250    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 305
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330176 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330117

                                                                          
Query: 306    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 365
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330116 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330060

                            
Query: 366    aatacacatcaatt 379
              |||||| |||||||
Sbjct: 330059 aatacatatcaatt 330046



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 50     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 103
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 330356 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 330303

to top

>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion,
              complete genome
          Length = 490669

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 130    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 189
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330285 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330234

                                                                          
Query: 190    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 249
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330233 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330174

                                                                          
Query: 250    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 305
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330173 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330114

                                                                          
Query: 306    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 365
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330113 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330057

                            
Query: 366    aatacacatcaatt 379
              |||||| |||||||
Sbjct: 330056 aatacatatcaatt 330043



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 50     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 103
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 330353 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 330300

to top

>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome
          Length = 490520

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 130    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 189
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330142 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330091

                                                                          
Query: 190    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 249
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330090 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330031

                                                                          
Query: 250    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 305
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330030 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 329971

                                                                          
Query: 306    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 365
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 329970 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 329914

                            
Query: 366    aatacacatcaatt 379
              |||||| |||||||
Sbjct: 329913 aatacatatcaatt 329900



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 50     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 103
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 330210 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 330157

to top

>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence,
            complete sequence
          Length = 27470

 Score =  163 bits (82), Expect = 9e-37
 Identities = 143/162 (88%), Gaps = 1/162 (0%)
 Strand = Plus / Minus

                                                                        
Query: 63   taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 122
            |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 5365 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 5306

                                                                        
Query: 123  aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 182
             || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| |||
Sbjct: 5305 gattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtagc 5247

                                                      
Query: 183  attgtcatcatagcggattattataccgtcttcgcatttgaa 224
            | |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 5246 actgtcgtcatagcgtattattatactgtcttcgcatttgaa 5205

to top

>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                         
Query: 219   tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 274
             ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 37711 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 37652

                                                                         
Query: 275   gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 334
             ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 37651 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 37592

                                                          
Query: 335   atcgctgattaccagcagctcctatgactcgaatacacatcaatt 379
             |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 37591 atcagtgattac---cagctcctaagattcgaatacatatcaatt 37550

to top

>dbj|D13105.1|RICMT09 Oryza sativa (japonica cultivar-group) mitochondrial rp114
           pseudogene, clone:pMTVSCT13
          Length = 645

 Score =  155 bits (78), Expect = 2e-34
 Identities = 210/254 (82%), Gaps = 15/254 (5%)
 Strand = Plus / Plus

                                                                       
Query: 130 ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 189
           ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 161 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 212

                                                                       
Query: 190 tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 249
           ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 213 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 272

                                                                       
Query: 250 gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 305
           |||||  ||||||| |    |||||||||||| ||||| ||||| ||| |||||||||||
Sbjct: 273 gctcgtcttacttctgtctgatctttctagagccattttgggcactgcttctttgattac 332

                                                                       
Query: 306 agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 365
           |||||||||||| || |||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 333 agcaacaataacgtccccaatatgagcatatcagtgattac---cagctcctaagattcg 389

                         
Query: 366 aatacacatcaatt 379
           |||||| |||||||
Sbjct: 390 aatacatatcaatt 403



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 50  ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 103
           ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 93  ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 146

to top

>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0465E03
          Length = 151206

 Score =  153 bits (77), Expect = 9e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                          
Query: 424    tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 483
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147871 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 147812

                                   
Query: 484    gtctttccagaaagaaaaacc 504
              |||||||||||||||| ||||
Sbjct: 147811 gtctttccagaaagaagaacc 147791



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                          
Query: 541    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 147753 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 147694

                                                                  
Query: 601    gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
              |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 147693 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 147642

to top

>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score =  153 bits (77), Expect = 9e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                         
Query: 424   tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 483
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55633 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 55574

                                  
Query: 484   gtctttccagaaagaaaaacc 504
             |||||||||||||||| ||||
Sbjct: 55573 gtctttccagaaagaagaacc 55553



 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                         
Query: 541   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 600
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 55515 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 55456

                                                                 
Query: 601   gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 55455 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgac 55404

to top

>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0439E07
          Length = 176486

 Score =  145 bits (73), Expect = 2e-31
 Identities = 160/189 (84%)
 Strand = Plus / Minus

                                                                         
Query: 148   tttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattata 207
             ||||| || |||||||||||||| |||||  | |||||||  | |||| | |||||||||
Sbjct: 33438 tttggatttcctttttgatcaatgataacgactgcattgttgttatagagtattattata 33379

                                                                         
Query: 208   ccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggat 267
             |||| || ||||||||| ||  |||||||| | |||||||||| ||| |||||||  |||
Sbjct: 33378 ccgtttttgcatttgaaatccatacatgtatgcacaattacagatcgtattacttttgat 33319

                                                                         
Query: 268   ctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaata 327
             |||||||||||||| | || || ||| ||||| |||||||||||||||||||||||||||
Sbjct: 33318 ctttctagaggcatcttggacactgcatcttttattacagcaacaataacatcaccaata 33259

                      
Query: 328   cgagcatat 336
             |||| ||||
Sbjct: 33258 cgagtatat 33250

to top

>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence
          Length = 6550

 Score =  141 bits (71), Expect = 3e-30
 Identities = 179/215 (83%)
 Strand = Plus / Minus

                                                                        
Query: 60   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
            ||||||||| ||||| ||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 5904 ttataatacctcaggtgctaatgaaactattttagtgaaatttaactgtctcaattcccg 5845

                                                                        
Query: 120  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
            ||| || |||| ||| | ||||||||||||||| || |||| ||||||||||||||| ||
Sbjct: 5844 ggcgattgcgcaaaagattcgagttccttttggatttccttcttgatcaattataactgc 5785

                                                                        
Query: 180  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
            |||||| ||||||||  | |||||||||||||     | ||| | || |||||| |||||
Sbjct: 5784 agcattatcatcatactgaattattataccgttgctacgttttagttgtttacaagtacg 5725

                                               
Query: 240  tacaattacagctcgaattacttcggatctttcta 274
            ||||||||||||||  || ||||| ||||||||||
Sbjct: 5724 tacaattacagctctgatcacttcagatctttcta 5690



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 116/143 (81%), Gaps = 3/143 (2%)
 Strand = Plus / Minus

                                                                        
Query: 297  tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 356
            ||||||||||||||||| ||  || ||||||  |||||||||  |||||| |||   |||
Sbjct: 5667 tttgattacagcaacaacaatgtcgccaatataagcatatcgtcgattactagc---tcc 5611

                                                                        
Query: 357  tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 416
            || || |||||||||||||| ||  || ||||| || || || |||||||| ||| | ||
Sbjct: 5610 taggattcgaatacacatcagttcacgtgctccgctgttatccgctacattcaaatgagt 5551

                                   
Query: 417  ctgaggttgaatcatattatttt 439
             |||||||||||||||| |||||
Sbjct: 5550 ttgaggttgaatcatatcatttt 5528



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 624  tactccccccatttcataaagtat 647
            |||||| |||||||||||||||||
Sbjct: 5321 tactccacccatttcataaagtat 5298

to top

>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1046_F10
          Length = 118472

 Score =  141 bits (71), Expect = 3e-30
 Identities = 126/143 (88%), Gaps = 1/143 (0%)
 Strand = Plus / Minus

                                                                         
Query: 82    gaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcga 141
             ||||||||||| |||||||||||||||||||||| |||| | |||||||||||||| | |
Sbjct: 87867 gaaactattttagtaaaattcaattctctcaattactcgacgatcgcgccaaaaacgcaa 87808

                                                                         
Query: 142   gttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggatt 201
             ||||| ||||| || ||||||| |  ||| ||| |||  ||||||||||||||||| |||
Sbjct: 87807 gttccatttggatttccttttt-actaatgatatccgttgcattgtcatcatagcgtatt 87749

                                    
Query: 202   attataccgtcttcgcatttgaa 224
             |||||||||||||||||||||||
Sbjct: 87748 attataccgtcttcgcatttgaa 87726

to top

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  139 bits (70), Expect = 1e-29
 Identities = 306/382 (80%), Gaps = 7/382 (1%)
 Strand = Plus / Minus

                                                                         
Query: 60    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
             ||||||||| || || ||||||||||||||||| || ||||| || | |||||||||   
Sbjct: 45042 ttataatacctcgggtgctaatgaaactattttagtgaaatttaactgtctcaattctcg 44983

                                                                         
Query: 120   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
             ||| || |||  ||||| ||||||||||||||| || |||| || |||||| | ||||||
Sbjct: 44982 ggctattgcggaaaaaattcgagttccttttggatttccttctttatcaatgagaaccgc 44923

                                                                         
Query: 180   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
              ||||| ||||||||    ||||||||||| |     | ||| | ||||||||| |||||
Sbjct: 44922 cgcattatcatcatactttattattataccattactacgttttagttctttacaagtacg 44863

                                                                         
Query: 240   tacaattacagctcgaattacttcggatctttctagag--gcatttggggcaatgcgtct 297
             |||||||||||| |  || ||||| |||||||||| ||  | ||||||  |  ||| | |
Sbjct: 44862 tacaattacagccctgatcacttcagatctttctaaagatgaatttggtac--tgctttt 44805

                                                                         
Query: 298   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 357
             |||||||||||||||| ||  |||||||||  |||||| ||  |||||| |||   ||||
Sbjct: 44804 ttgattacagcaacaacaatgtcaccaatataagcataccgtcgattactagc---tcct 44748

                                                                         
Query: 358   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 417
             |||| |||||||||||||||||  || ||||| ||||| || ||||||||||||  ||| 
Sbjct: 44747 atgattcgaatacacatcaattcgcgggctccgctattatcggctacatttaaataggtt 44688

                                   
Query: 418   tgaggttgaatcatattatttt 439
             |||||||||||||||| |||||
Sbjct: 44687 tgaggttgaatcatatcatttt 44666

to top

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  125 bits (63), Expect = 2e-25
 Identities = 177/215 (82%)
 Strand = Plus / Plus

                                                                         
Query: 60    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
             ||||||||| || || ||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 79709 ttataatacctcgggtgctaatgaaactattttagtgaaatttaactgtctcaattcccg 79768

                                                                         
Query: 120   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
             ||| || || | ||| | ||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 79769 ggcgattgcacaaaagattcgagttccttttggatttccttcttgatcaatgacaactgc 79828

                                                                         
Query: 180   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
             |||||| ||||||||  | |||||||||||||     | ||||| ||||||||| |||||
Sbjct: 79829 agcattatcatcatactgaattattataccgttgctacgtttgagttctttacaagtacg 79888

                                                
Query: 240   tacaattacagctcgaattacttcggatctttcta 274
             ||||||||||||||  || ||||| ||||||||||
Sbjct: 79889 tacaattacagctctgatcacttctgatctttcta 79923



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 118/143 (82%), Gaps = 3/143 (2%)
 Strand = Plus / Plus

                                                                         
Query: 297   tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 356
             ||||||||||||||||| ||  |||||||||  |||||||||  |||||| |||   |||
Sbjct: 79946 tttgattacagcaacaacaatgtcaccaatataagcatatcgtcgattactagc---tcc 80002

                                                                         
Query: 357   tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 416
             || || |||||||||||||| ||  || ||||| ||||| || |||||||| ||| | ||
Sbjct: 80003 taggattcgaatacacatcagttcgcgtgctccgctattatcagctacattcaaatgagt 80062

                                    
Query: 417   ctgaggttgaatcatattatttt 439
              |||||||||||||||| |||||
Sbjct: 80063 ttgaggttgaatcatatcatttt 80085

to top

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  123 bits (62), Expect = 8e-25
 Identities = 119/138 (86%)
 Strand = Plus / Plus

                                                                         
Query: 55    agtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaat 114
             |||| |||||||||||| ||||| |||||||||||||| || |||||||||| |||||||
Sbjct: 60553 agtacttataatacttcgggagccaatgaaactattttcgtgaaattcaattgtctcaat 60612

                                                                         
Query: 115   tcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattata 174
             ||||  |||| ||  ||||||||||||||||||||||| || ||||  |||||||| | |
Sbjct: 60613 tcctgagcaaccggaccaaaaactcgagttccttttggatttccttcctgatcaatgaca 60672

                               
Query: 175   accgcagcattgtcatca 192
             || || ||||||||||||
Sbjct: 60673 acggctgcattgtcatca 60690



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 600   agctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||||||||| || ||||| |||||||| ||||||||||||||||| ||||
Sbjct: 61101 agctgctctagcgacggtttcggatactccgcccatttcataaagtattcgac 61153



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 352   gctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||  |||||||||||||| | |||||| ||||||||
Sbjct: 60847 gctcctagaactcgaatacacattatttttcgggctccact 60887

to top

>emb|X68048.1|CHPVHISG Phaseolus vulgaris chloroplast DNA for tRNA-His gene region
          Length = 1698

 Score =  117 bits (59), Expect = 5e-23
 Identities = 176/215 (81%)
 Strand = Plus / Plus

                                                                        
Query: 60   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
            ||||||||| || || ||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 954  ttataatacctcgggtgctaatgaaactattttagtgaaatttaactgtctcaattcccg 1013

                                                                        
Query: 120  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 179
            ||| || |||| ||| | ||||||||||||||| || |||| ||||||||||| ||| ||
Sbjct: 1014 ggcgattgcgcaaaagattcgagttccttttggatttccttcttgatcaattacaactgc 1073

                                                                        
Query: 180  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 239
            |||||| ||||||||  | |||||||||||||     | ||| | || |||||| || ||
Sbjct: 1074 agcattatcatcatactgaattattataccgttgctacgttttagttgtttacaagtccg 1133

                                               
Query: 240  tacaattacagctcgaattacttcggatctttcta 274
            ||||||||||||||  || ||||| ||||||||||
Sbjct: 1134 tacaattacagctctgatcacttctgatctttcta 1168



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 624  tactccccccatttcataaagtat 647
            |||||| |||||||||||||||||
Sbjct: 1529 tactccacccatttcataaagtat 1552



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 404  catttaaaagggtctgaggttgaatcatattatttt 439
            |||||||| | || |||||||||||||||| |||||
Sbjct: 1296 catttaaatgagtttgaggttgaatcatatcatttt 1331

to top

>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence
          Length = 130054

 Score =  115 bits (58), Expect = 2e-22
 Identities = 249/310 (80%), Gaps = 7/310 (2%)
 Strand = Plus / Plus

                                                                         
Query: 132   aaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatc 191
             ||||| ||||||||||||||| || |||| || |||||| | |||||| ||||| |||||
Sbjct: 30545 aaaaattcgagttccttttggatttccttctttatcaatgagaaccgccgcattatcatc 30604

                                                                         
Query: 192   atagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagc 251
             |||    ||||||||||| |     | ||| | ||||||||| |||||||||||||||||
Sbjct: 30605 atactttattattataccattactacgttttagttctttacaagtacgtacaattacagc 30664

                                                                         
Query: 252   tcgaattacttcggatctttctagag--gcatttggggcaatgcgtctttgattacagca 309
              |  || ||||| |||||||||| ||  | ||||||  |  ||| | |||||||||||||
Sbjct: 30665 cctgatcacttcagatctttctaaagatgaatttggtac--tgcttttttgattacagca 30722

                                                                         
Query: 310   acaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaata 369
             |||| ||  |||||||||  |||||| ||  |||||| |||   |||||||| |||||||
Sbjct: 30723 acaacaatgtcaccaatataagcataccgtcgattactagc---tcctatgattcgaata 30779

                                                                         
Query: 370   cacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatc 429
             ||||||||||  || ||||| ||||| || ||||||||||||  ||| ||||||||||||
Sbjct: 30780 cacatcaattcgcgggctccgctattatcggctacatttaaataggtttgaggttgaatc 30839

                       
Query: 430   atattatttt 439
             |||| |||||
Sbjct: 30840 atatcatttt 30849

to top

>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence
          Length = 140624

 Score =  115 bits (58), Expect = 2e-22
 Identities = 249/310 (80%), Gaps = 7/310 (2%)
 Strand = Plus / Minus

                                                                          
Query: 132    aaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatc 191
              ||||| ||||||||||||||| || |||| || |||||| | |||||| ||||| |||||
Sbjct: 114958 aaaaattcgagttccttttggatttccttctttatcaatgagaaccgccgcattatcatc 114899

                                                                          
Query: 192    atagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagc 251
              |||    ||||||||||| |     | ||| | ||||||||| |||||||||||||||||
Sbjct: 114898 atactttattattataccattactacgttttagttctttacaagtacgtacaattacagc 114839

                                                                          
Query: 252    tcgaattacttcggatctttctagag--gcatttggggcaatgcgtctttgattacagca 309
               |  || ||||| |||||||||| ||  | ||||||  |  ||| | |||||||||||||
Sbjct: 114838 cctgatcacttcagatctttctaaagatgaatttggtac--tgcttttttgattacagca 114781

                                                                          
Query: 310    acaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaata 369
              |||| ||  |||||||||  |||||| ||  |||||| |||   |||||||| |||||||
Sbjct: 114780 acaacaatgtcaccaatataagcataccgtcgattactagc---tcctatgattcgaata 114724

                                                                          
Query: 370    cacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatc 429
              ||||||||||  || ||||| ||||| || ||||||||||||  ||| ||||||||||||
Sbjct: 114723 cacatcaattcgcgggctccgctattatcggctacatttaaataggtttgaggttgaatc 114664

                        
Query: 430    atattatttt 439
              |||| |||||
Sbjct: 114663 atatcatttt 114654

to top

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  115 bits (58), Expect = 2e-22
 Identities = 118/138 (85%)
 Strand = Plus / Plus

                                                                         
Query: 55    agtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaat 114
             |||| |||||| ||||| ||||| |||||||||||||| || |||||||||| |||||||
Sbjct: 58649 agtacttataagacttcgggagccaatgaaactattttagtgaaattcaattgtctcaat 58708

                                                                         
Query: 115   tcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattata 174
             ||||  |||| ||  ||||||||||||||||||||||| || ||||  |||||||| | |
Sbjct: 58709 tcctgagcaaccggaccaaaaactcgagttccttttggatttccttcctgatcaatgaca 58768

                               
Query: 175   accgcagcattgtcatca 192
             || || ||||||||||||
Sbjct: 58769 acggctgcattgtcatca 58786



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 600   agctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
             |||||||||||| || ||||| |||||||| ||||||||||||||||| ||||
Sbjct: 59191 agctgctctagcgacggtttcggatactccgcccatttcataaagtattcgac 59243



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 352   gctcctatgactcgaatacacatcaattttcgagctccact 392
             |||||||  |||||||||||||| | |||||| ||||||||
Sbjct: 58943 gctcctagaactcgaatacacattatttttcgggctccact 58983

to top

>gb|M60180.1|OBECPRPB O.ammophila ribosomal protein L14 and S8 (rpl14, rps8) genes, 5'
           end and 3' end
          Length = 625

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                       
Query: 60  ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 119
           ||||||||| ||||| ||||||||||||||||| || ||| | || ||||||||||| | 
Sbjct: 524 ttataatacctcaggtgctaatgaaactattttagtgaaacttaactctctcaattcgtg 583

                                            
Query: 120 ggcaatcgcgccaaaaactcgagttccttttgg 152
           ||||||||| ||||||||||| |||||||||||
Sbjct: 584 ggcaatcgcaccaaaaactcgggttccttttgg 616

to top

>gb|DQ069419.1| Typha latifolia ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 408

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                       
Query: 558 aaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagt 617
           ||||||| ||||||| |||||||| |  || ||||| | |||||||||||||||||||||
Sbjct: 396 aaattgagttcgtataggcattttgcgcgcagctattgcgatagctgctctagctacagt 337

                                      
Query: 618 ttcagatactccccccatttcataaag 644
           ||| |||||||| ||||||||||||||
Sbjct: 336 ttctgatactccacccatttcataaag 310

to top

>dbj|AB077366.1| Iris bungei plastid DNA, intron region
          Length = 576

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                       
Query: 404 catttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgc 463
           |||||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||
Sbjct: 568 catttaaaagggtctgaggttgaatcatatcatttttatttgaatctgttatttcaatgc 509

              
Query: 464 aaa 466
           |||
Sbjct: 508 aaa 506



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 598 atagctgctctagctacagtttcagatactccccccatttcataaagtat 647
           ||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 330 atagctgctctggctacagtttctgatactccgcccatttcataaagtat 281

to top

>dbj|AB077365.1| Iris dichotoma plastid DNA, intron region
          Length = 566

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                       
Query: 558 aaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagt 617
           ||||||| ||||||| |||||||| |  || ||||| || ||||||||||| ||||||||
Sbjct: 379 aaattgagttcgtataggcattttgcacgcagctattgaaatagctgctctggctacagt 320

                                              
Query: 618 ttcagatactccccccatttcataaagtatacgac 652
           ||| |||||||| ||||||||||||||||| ||||
Sbjct: 319 ttctgatactccgcccatttcataaagtattcgac 285



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 404 catttaaaagggtctgaggttgaatcat 431
           ||||||||||||||||||||||||||||
Sbjct: 558 catttaaaagggtctgaggttgaatcat 531

to top

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 106/126 (84%)
 Strand = Plus / Minus

                                                                         
Query: 67    acttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatc 126
             |||||||||||||| ||||||||||| |||||||| || |||||||||||   |||||  
Sbjct: 41481 acttcaggagctaaagaaactattttagtaaaatttaagtctctcaattctctggcaact 41422

                                                                         
Query: 127   gcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattg 186
             |  ||||||||||| |||||| |||| ||||||| |||||  || | |||||||||||| 
Sbjct: 41421 ggaccaaaaactcgtgttcctcttggattgccttcttgattgatgacaaccgcagcatta 41362

                   
Query: 187   tcatca 192
             ||||||
Sbjct: 41361 tcatca 41356



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 364   cgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggt 423
             ||||||||||| |  ||||||||||| || ||||| ||||||||||||   | |||||||
Sbjct: 41187 cgaatacacatgagctttcgagctccgctgttgtcggctacatttaaataagactgaggt 41128

                     
Query: 424   tgaatcat 431
             ||||||||
Sbjct: 41127 tgaatcat 41120

to top

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 113/136 (83%)
 Strand = Plus / Plus

                                                                         
Query: 57    tatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 116
             ||||||||| ||||| |||||||| ||||||||||| ||||||||  ||||||| |||||
Sbjct: 76250 tatttataaaacttctggagctaacgaaactattttagtaaaattagattctcttaattc 76309

                                                                         
Query: 117   ctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataac 176
                 ||||| |  ||||||||||||||||||||||| || |||| ||||| ||| | |||
Sbjct: 76310 tctagcaattggaccaaaaactcgagttccttttggatttccttcttgattaataacaac 76369

                             
Query: 177   cgcagcattgtcatca 192
              || ||||| ||||||
Sbjct: 76370 tgctgcattatcatca 76385



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                         
Query: 354   tcctatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaag 413
             |||||| |||||||| ||||| | |||||||||||||||||| ||||| |||||||||  
Sbjct: 76544 tcctataactcgaatgcacattagttttcgagctccactattatctgcaacatttaaata 76603

                               
Query: 414   ggtctgaggttgaatcat 431
              || ||||||||||||||
Sbjct: 76604 agtttgaggttgaatcat 76621



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 223   aattctttacatgtacgtacaattacagctc 253
             ||||||||||| |||||||||||||||||||
Sbjct: 76416 aattctttacacgtacgtacaattacagctc 76446

to top

>gb|DQ069420.1| Yucca schidigera ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 390

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                       
Query: 558 aaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagt 617
           ||||||| ||||||| |||||||| |  || ||||| || ||||||| ||| ||||||||
Sbjct: 387 aaattgagttcgtataggcattttgcacgcagctattgaaatagctgttctggctacagt 328

                                              
Query: 618 ttcagatactccccccatttcataaagtatacgac 652
           ||| |||||||| ||||||||||||||||| ||||
Sbjct: 327 ttcggatactccacccatttcataaagtattcgac 293

to top

>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08,
             complete sequence
          Length = 186642

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                
Query: 236   tacgtacaattacagctcgaattacttcggatctttctagaggcatttggg 286
             |||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 94927 tacgtacaattacagctcaaattacttcggatctttccagaggcatttggg 94877

to top

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 114/135 (84%), Gaps = 2/135 (1%)
 Strand = Plus / Plus

                                                                         
Query: 59    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 118
             |||||||||||||||| ||||| ||||||||||| ||||||||  |||| |  ||||| |
Sbjct: 79910 tttataatacttcaggtgctaacgaaactattttagtaaaattagattcacgtaattc-t 79968

                                                                         
Query: 119   cg-gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 177
             || ||||  | ||||||||||||||||||||| || || |||| ||||| ||| ||||| 
Sbjct: 79969 cgtgcaacagggccaaaaactcgagttcctttaggatttccttcttgattaataataact 80028

                            
Query: 178   gcagcattgtcatca 192
             |||||||| ||||||
Sbjct: 80029 gcagcattatcatca 80043



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 367   atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 426
             |||||||| ||||| || ||||||||||| || ||||||||||||   || |||||||||
Sbjct: 80215 atacacattaatttgcgcgctccactattatcagctacatttaaataagtttgaggttga 80274

                  
Query: 427   atcat 431
             |||||
Sbjct: 80275 atcat 80279



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 598   atagctgctctagctacagtttcagatactcc 629
             |||||||||||||| ||| |||||| ||||||
Sbjct: 80507 atagctgctctagcaacactttcaggtactcc 80538

to top

>dbj|AB087469.1| Anthoceros formosae chloroplast rpl14 mRNA for ribosomal protein
           L14, complete cds
          Length = 460

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 363 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 411
           |||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 322 tcgaatacacatcagttttcgagctccactgttgtctgctacatttaaa 370



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 225 ttctttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcat 281
           ||||||||| ||||||||||||||||||| || |||||| ||| ||| |||||||||
Sbjct: 187 ttctttacaagtacgtacaattacagctctaactacttctgatttttttagaggcat 243



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 ccaaaaactcgagttccttt 149
           ||||||||||||||||||||
Sbjct: 92  ccaaaaactcgagttccttt 111

to top

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                               
Query: 363    tcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 411
              |||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 100021 tcgaatacacatcagttttcgagctccactgttgtctgctacatttaaa 100069



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                      
Query: 225   ttctttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcat 281
             ||||||||| ||||||||||||||||||| || |||||| ||| ||| |||||||||
Sbjct: 99886 ttctttacaagtacgtacaattacagctctaactacttctgatttttttagaggcat 99942



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   ccaaaaactcgagttccttt 149
             ||||||||||||||||||||
Sbjct: 99791 ccaaaaactcgagttccttt 99810

to top

>gb|M60179.1|OBECPRPA O.ammophila ribosomal protein L14 and L16 (rpl14, rpl16) genes, 3'
           end and 5' end
          Length = 542

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 112/135 (82%), Gaps = 3/135 (2%)
 Strand = Plus / Plus

                                                                       
Query: 305 cagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactc 364
           ||||||||||||  ||||| ||| ||||||||||  |||||| |||   ||| |||| ||
Sbjct: 1   cagcaacaataatgtcaccgatatgagcatatcgacgattactagc---tccgatgattc 57

                                                                       
Query: 365 gaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggtt 424
           |||||||||| |||| |||||| ||||| || || || ||||| ||| |||| |||||||
Sbjct: 58  gaatacacattaattctcgagccccactgttatccgcgacattcaaacgggtttgaggtt 117

                          
Query: 425 gaatcatattatttt 439
           ||||||||| |||||
Sbjct: 118 gaatcatatcatttt 132

to top

>gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0010M24, complete sequence
          Length = 164853

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                         
Query: 568   cgtatgggcattttactggccgctatggagatagctgctctagctacagtttcagatact 627
             ||||| ||||||||  |||| |||||||| ||||||||||||||||| | ||| | ||||
Sbjct: 75834 cgtataggcattttggtggcagctatggaaatagctgctctagctactgcttcgggtact 75775

                                 
Query: 628   ccccccatttcataaagtat 647
             || |||||||||||||||||
Sbjct: 75774 ccacccatttcataaagtat 75755

to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                           
Query: 568     cgtatgggcattttactggccgctatggagatagctgctctagctacagtttcagatact 627
               ||||| ||||||||  |||| |||||||| ||||||||||||||||| | ||| | ||||
Sbjct: 9208186 cgtataggcattttggtggcagctatggaaatagctgctctagctactgcttcgggtact 9208245

                                   
Query: 628     ccccccatttcataaagtat 647
               || |||||||||||||||||
Sbjct: 9208246 ccacccatttcataaagtat 9208265



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 311      caataacatcaccaatacgagcatatcgctgattaccagc 350
                ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 11796144 caataacgtcaccaatatgagcatatcagtgattaccagc 11796105

to top

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                
Query: 59   tttataatacttcaggagctaatgaaactattttggtaaaattcaattctct 110
            ||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 5586 tttataatacttcaggagccaatgaaactattttagtaaaattgaattctct 5535



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 363  tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 422
            ||||||||||||   ||||  ||||||||| |||||||||||||| |||   || |||||
Sbjct: 5285 tcgaatacacattggttttttagctccactgttgtctgctacattcaaatacgtttgagg 5226

                        
Query: 423  ttgaatcatatt 434
            ||||||||||||
Sbjct: 5225 ttgaatcatatt 5214

to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                           
Query: 568     cgtatgggcattttactggccgctatggagatagctgctctagctacagtttcagatact 627
               ||||| ||||||||  |||| |||||||| ||||||||||||||||| | ||| | ||||
Sbjct: 9279883 cgtataggcattttggtggcagctatggaaatagctgctctagctactgcttcgggtact 9279942

                                   
Query: 628     ccccccatttcataaagtat 647
               || |||||||||||||||||
Sbjct: 9279943 ccacccatttcataaagtat 9279962



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 311      caataacatcaccaatacgagcatatcgctgattaccagc 350
                ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 11874555 caataacgtcaccaatatgagcatatcagtgattaccagc 11874516

to top

>emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095H06,
             complete sequence
          Length = 126447

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 73/84 (86%), Gaps = 4/84 (4%)
 Strand = Plus / Plus

                                                                         
Query: 227   ctttacatgtacgtacaattacagctcgaattact----tcggatctttctagaggcatt 282
             ||||||||||||||||||||||||||||  |||||    || ||||||||||||||||||
Sbjct: 89363 ctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcatt 89422

                                     
Query: 283   tggggcaatgcgtctttgattaca 306
             | ||||| ||| |||||| |||||
Sbjct: 89423 ttgggcactgcttctttggttaca 89446

to top

>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_H01
          Length = 121377

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                          
Query: 114    ttcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattat 173
              ||||||||| |||| ||||||||| |||||||||||||| || | ||||||| |||| ||
Sbjct: 117502 ttcctcggcgatcgtgccaaaaacgcgagttccttttggatttcttttttgaccaatgat 117561

                                
Query: 174    aaccgcagcattgtcatc 191
              |||||  |||||||||||
Sbjct: 117562 aaccgttgcattgtcatc 117579

to top

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                         
Query: 363   tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 422
             |||||||||||||||||||||||||||||| ||||||| ||| ||||||    | |||||
Sbjct: 79713 tcgaatacacatcaattttcgagctccactgttgtctgttacttttaaataactttgagg 79772

                      
Query: 423   ttgaatcat 431
             |||||||||
Sbjct: 79773 ttgaatcat 79781



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 68    cttcaggagctaatgaaactattttggtaaaatt 101
             ||||||||||||| || |||||||| ||||||||
Sbjct: 79421 cttcaggagctaaagatactattttagtaaaatt 79454

to top

>dbj|AB077439.1| Sophora alopecuroides plastid DNA, intron region
          Length = 569

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                               
Query: 404 catttaaaagggtctgaggttgaatcatattatttt 439
           ||||||||||||||||||||||||||||||||||||
Sbjct: 561 catttaaaagggtctgaggttgaatcatattatttt 526

to top

>gb|DQ069416.1| Ginkgo biloba ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 414

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 598 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||||||||||||||||| || |||||||| || |||||||||||||| ||||
Sbjct: 356 atagctgctctagctacagtctctgatactccgcctatttcataaagtattcgac 302

to top

>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506A10
          Length = 145265

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 101/124 (81%), Gaps = 8/124 (6%)
 Strand = Plus / Minus

                                                                          
Query: 130    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 189
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 127299 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 127248

                                                                          
Query: 190    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 249
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||| 
Sbjct: 127247 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattact 127188

                  
Query: 250    gctc 253
              ||||
Sbjct: 127187 gctc 127184



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 130    ccaaaaactcgagttccttttgggttgcctttttgat 166
              ||||||||||||||||||||||| || |||| |||||
Sbjct: 126033 ccaaaaactcgagttccttttggatttccttcttgat 125997



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 130    ccaaaaactcgagttccttttgggttgcctttttgat 166
              ||||||||||||||||||||||| || |||| |||||
Sbjct: 121959 ccaaaaactcgagttccttttggatttccttcttgat 121923

to top

>gb|DQ069422.1| Ginkgo biloba ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 108/130 (83%), Gaps = 2/130 (1%)
 Strand = Plus / Minus

                                                                       
Query: 63  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg-g 121
           ||||||||| ||||| |||| ||||||||| || ||||| |||| ||||||||| ||| |
Sbjct: 366 taatacttcgggagccaatggaactatttttgtgaaattaaattgtctcaattc-tcgag 308

                                                                       
Query: 122 caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 181
           |||  |  |||||||||||||||||||| || || ||||  |||||||| | ||| || |
Sbjct: 307 caactgaaccaaaaactcgagttcctttcggatttccttcctgatcaatgacaactgctg 248

                     
Query: 182 cattgtcatc 191
           ||||||||||
Sbjct: 247 cattgtcatc 238

to top

>gb|M80799.1|VIRCPRPL Vigna unguiculata chloroplast ribosomal protein (L16 and L14) genes,
            3' and 5' end respectively
          Length = 1268

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 116/143 (81%), Gaps = 3/143 (2%)
 Strand = Plus / Minus

                                                                        
Query: 297  tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 356
            ||||||||||||||||| ||  || ||||||  |||||||||  |||||| |||   |||
Sbjct: 1258 tttgattacagcaacaacaatgtcgccaatataagcatatcgtcgattactagc---tcc 1202

                                                                        
Query: 357  tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 416
            || || |||||||||||||| ||  || ||||| || || || |||||||| ||| | ||
Sbjct: 1201 taggattcgaatacacatcagttcacgtgctccgctgttatccgctacattcaaatgagt 1142

                                   
Query: 417  ctgaggttgaatcatattatttt 439
             |||||||||||||||| |||||
Sbjct: 1141 ttgaggttgaatcatatcatttt 1119



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 624 tactccccccatttcataaagtat 647
           |||||| |||||||||||||||||
Sbjct: 921 tactccacccatttcataaagtat 898

to top

>gb|DQ069418.1| Ranunculus macranthus ribosomal protein L16 (rpl16) gene, partial
           cds; chloroplast
          Length = 405

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 589 gctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtata 648
           ||||| || |||||| |||| |||||| |||| |||||||| ||||||||||||||||| 
Sbjct: 362 gctatagaaatagcttctctggctacaatttctgatactccacccatttcataaagtatt 303

               
Query: 649 cgac 652
           ||||
Sbjct: 302 cgac 299

to top

>dbj|AB077337.1| Saussurea involucrata plastid DNA, intron region
          Length = 541

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 404 catttaaaagggtctgaggttgaatcatattatttt 439
           |||||||||||||||||||||||||||||| |||||
Sbjct: 533 catttaaaagggtctgaggttgaatcatatgatttt 498

to top

>emb|X03834.1|CHSOL16 Spirodela oligorhiza chloroplast gene for ribosomal protein L16
          Length = 2064

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 400  gctacatttaaaagggtctgaggttgaatcatattatttt 439
            |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 2049 gctacattcaaaagggtctgaggttgaatcatatcatttt 2010



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 598  atagctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
            ||||||| ||| || |||||||| ||||| ||||| |||||||||||||| ||||
Sbjct: 1838 atagctgttctggcgacagtttcggataccccccctatttcataaagtattcgac 1784

to top

>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome
          Length = 161452

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 361    actcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 411
              |||||||||||||| ||||| ||||| |||||||| || ||||||||||||
Sbjct: 140455 actcgaatacacattaatttgcgagcaccactattatcagctacatttaaa 140505



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 67     acttcaggagctaatgaaactattttggtaaaatt 101
              |||||||||||||| ||||| ||||| ||||||||
Sbjct: 140167 acttcaggagctaaagaaacaatttttgtaaaatt 140201

to top

>gb|DQ069415.1| Acorus americanus ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 390

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 598 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           ||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 347 atagcggctctggctacagtttctgatactccacccatctcataaagtattcgac 293

to top

>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1175_B01
          Length = 96191

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 95    taaaattcaattctctcaattcctcggcaatcgcgccaaaaac 137
             ||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 20850 taaaattcaatactctcgattcctcggcgatcgcgccaaaaac 20808

to top

>dbj|AB096925.1| Papaver somniferum chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 493

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 598 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgac 250

to top

>dbj|AB096924.1| Papaver setigerum chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 493

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 598 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgac 250

to top

>dbj|AB096923.1| Papaver rhoeas chloroplast rpl16 gene for ribosomal protein large
           subunit 16, partial cds
          Length = 493

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 598 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgac 250

to top

>dbj|AB096922.1| Papaver pseudo-orientale chloroplast rpl16 gene for ribosomal
           protein large subunit 16, partial cds
          Length = 494

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 598 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgac 250

to top

>dbj|AB096921.1| Papaver orientale chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 494

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 598 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgac 250

to top

>dbj|AB096920.1| Papaver bracteatum chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 494

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 598 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgac 250

to top

>gb|DQ069417.1| Nuphar advena ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 396

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 598 atagctgctctagctacagtttcagatactccccccatttcataaagtat 647
           ||||| ||||| ||||| ||||| |||||||| |||||||||||||||||
Sbjct: 353 atagcggctctggctacggtttctgatactccgcccatttcataaagtat 304

to top

>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome
          Length = 151933

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                         
Query: 367   atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 426
             |||||||| |||||||| ||||||||||| ||||| || |||| |   || |||||||||
Sbjct: 16479 atacacattaattttcgtgctccactattatctgcgacgtttacatatgtttgaggttga 16420

                      
Query: 427   atcatatta 435
             |||||||||
Sbjct: 16419 atcatatta 16411

to top

>dbj|AB077335.1| Allium altaicum plastid DNA, intron region
          Length = 551

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 404 catttaaaagggtctgaggttgaatcata 432
           |||||||||||||||||||||||||||||
Sbjct: 543 catttaaaagggtctgaggttgaatcata 515



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 601 gctgctctagctacagtttcagatactccccccatttcataaagtatacgac 652
           |||||||| ||||||||||| || ||||| |||||||| |||||||| ||||
Sbjct: 205 gctgctctggctacagtttctgagactccgcccatttcgtaaagtattcgac 256

to top

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 364   cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 411
             |||||||||||||| || |||||||| ||||| |||||||||| ||||
Sbjct: 76668 cgaatacacatcaacttgcgagctccgctattatctgctacatctaaa 76715

to top

>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome
          Length = 203828

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 364   cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 411
             ||||||||||| ||||  ||||| |||||||| |||||||||||||||
Sbjct: 28989 cgaatacacattaattcacgagcaccactattatctgctacatttaaa 28942



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 227   ctttacatgtacgtacaattacagctcg 254
             |||||| |||||||||||| ||||||||
Sbjct: 29123 ctttacgtgtacgtacaataacagctcg 29096

to top

>emb|X14062.1|CHCRL14 Chlamydomonas reinhardtii plasti gene for ribosomal protein L14
          Length = 988

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 364 cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 411
           ||||||||||| ||||  ||||| |||||||| |||||||||||||||
Sbjct: 588 cgaatacacattaattcacgagcaccactattatctgctacatttaaa 541



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 227 ctttacatgtacgtacaattacagctcg 254
           |||||| |||||||||||| ||||||||
Sbjct: 722 ctttacgtgtacgtacaataacagctcg 695

to top

>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0560B06
          Length = 161720

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 612    tacagtttcagatactccccccatttcataaagta 646
              |||||||||||||||||| ||| ||||||||||||
Sbjct: 147642 tacagtttcagatactccgcccttttcataaagta 147608

to top

>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete
             Sequence, complete sequence
          Length = 105198

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 612   tacagtttcagatactccccccatttcataaagta 646
             |||||||||||||||||| ||| ||||||||||||
Sbjct: 85252 tacagtttcagatactccgcccttttcataaagta 85218

to top

>gb|M30487.1|CPACYRP Cyanophora paradoxa ribosomal protein l22 (rpl22) gene, partial cds;
            ribosomal protein s3 (rps3), ribosomal protein l16
            (rpl16), ribosomal protein l7 (rpl7), ribosomal protein
            l14 (rpl14), ribosomal protein l5 (rpl5), ribosomal
            protein s8 (rps8), ribosomal protein l6 (rpl6), ribosomal
            protein l18 (rpl18), ribosomal protein s5 (rps5), and
            ribosomal protein secY (secY) genes, complete cds; and
            ORF gene, partial cds
          Length = 6468

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 361  actcgaatacacatcaattttcgagctccactatt 395
            |||||||||||||| ||||| ||||||||||||||
Sbjct: 1744 actcgaatacacattaatttacgagctccactatt 1710



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 61   tataatacttcaggagctaatgaaactattttggtaaaatt 101
            ||||||||||| |||||||| ||||  ||||| ||||||||
Sbjct: 2041 tataatacttccggagctaaagaaataatttttgtaaaatt 2001



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 303  tacagcaacaataacatcaccaatacgagcata 335
            |||||| ||||| ||||||||||| ||||||||
Sbjct: 1799 tacagcgacaattacatcaccaattcgagcata 1767

to top

>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0043B10
          Length = 167399

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 612    tacagtttcagatactccccccatttcataaagta 646
              |||||||||||||||||| ||| ||||||||||||
Sbjct: 103556 tacagtttcagatactccgcccttttcataaagta 103522

to top

>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 86    ctattttggtaaaattcaattctctcaattc 116
             ||||||| |||||||||||||||||||||||
Sbjct: 45211 ctattttagtaaaattcaattctctcaattc 45181

to top

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 361   actcgaatacacatcaattttcgagctccactatt 395
             |||||||||||||| ||||| ||||||||||||||
Sbjct: 52478 actcgaatacacattaatttacgagctccactatt 52512



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 303   tacagcaacaataacatcaccaatacgagcata 335
             |||||| ||||| ||||||||||| ||||||||
Sbjct: 52423 tacagcgacaattacatcaccaattcgagcata 52455



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 61    tataatacttcaggagctaatgaaactattttggtaaaatt 101
             ||||||||||| |||||||| ||||  ||||| ||||||||
Sbjct: 52181 tataatacttccggagctaaagaaataatttttgtaaaatt 52221

to top

>gb|AF050665.1|AF050665 Spirogyra maxima tRNA-Ile gene, complete sequence; and ribosomal
            protein L23 (rpl23), ribosomal protein L2 (rpl2),
            ribosomal protein S19 (rps19), ribosomal protein L22
            (rpl22), ribosomal protein S3 (rps3), ribosomal protein
            L16 (rpl16), ribosomal protein L14 (rpl14), ribosomal
            protein S8 (rps8), initiation factor A (infA), ribosomal
            protein L36 (rpl36), ribosomal protein S11 (rps11), and
            RNA polymerase alpha subunit (rpoA) genes, complete cds,
            chloroplast genes for chloroplast products
          Length = 8794

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 67   acttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 116
            |||||||||||||| || ||||| || |||||||| |||||||| |||||
Sbjct: 5584 acttcaggagctaaagatactatcttagtaaaatttaattctcttaattc 5535



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 364  cgaatacacatcaattttcgagctccact 392
            ||||||||||| ||||| |||||||||||
Sbjct: 5290 cgaatacacattaatttacgagctccact 5262

to top

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 367    atacacatcaattttcgagctccactattgtctgctacatt 407
              |||||||||||||| ||||| || ||||||||||| |||||
Sbjct: 879333 atacacatcaatttacgagcgccgctattgtctgcgacatt 879293

to top

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 367     atacacatcaattttcgagctccactattgtctgctacatt 407
               |||||||||||||| ||||| || ||||||||||| |||||
Sbjct: 5047012 atacacatcaatttacgagcgccgctattgtctgcgacatt 5047052

to top

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 380   ttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcat 431
             |||||||||||||||| || ||||||||||||   |  ||||||||||||||
Sbjct: 94493 ttcgagctccactattatcggctacatttaaataagattgaggttgaatcat 94442

to top

>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007C02, complete sequence
          Length = 148265

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 311   caataacatcaccaatacgagcatatcgctgattaccagc 350
             ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 98741 caataacgtcaccaatatgagcatatcagtgattaccagc 98780

to top

>dbj|AB077333.1| Ferula feruloides plastid DNA, intron region
          Length = 531

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 404 catttaaaagggtctgaggttgaa 427
           ||||||||||||||||||||||||
Sbjct: 523 catttaaaagggtctgaggttgaa 500

to top

>ref|NM_128441.3| Arabidopsis thaliana structural constituent of ribosome AT2G28820
           mRNA, complete cds
          Length = 1156

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 301 attacagcaacaataacatcaccaatacgagcata 335
           ||||| ||||||| ||||||||||||| |||||||
Sbjct: 999 attacggcaacaacaacatcaccaatatgagcata 965

to top

>emb|AL359081.10| Human DNA sequence from clone RP11-541F9 on chromosome 1, complete
             sequence
          Length = 109288

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 80    atgaaactattttggtaaaattcaatt 106
             |||||||||||||||||| ||||||||
Sbjct: 91500 atgaaactattttggtaacattcaatt 91474

to top

>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete
             sequence
          Length = 107097

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 301   attacagcaacaataacatcaccaatacgagcata 335
             ||||| ||||||| ||||||||||||| |||||||
Sbjct: 38089 attacggcaacaacaacatcaccaatatgagcata 38123

to top

>gb|AY219111.2| Arabidopsis thaliana hypothetical protein (At2g28820/F8N16.11) mRNA,
            complete cds
          Length = 1179

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 301  attacagcaacaataacatcaccaatacgagcata 335
            ||||| ||||||| ||||||||||||| |||||||
Sbjct: 1002 attacggcaacaacaacatcaccaatatgagcata 968

to top

>dbj|AP000606.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MTO24
          Length = 82360

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 430   atattattttgatttcaatttgttatt 456
             |||||||||||||||||| ||||||||
Sbjct: 13778 atattattttgatttcaaattgttatt 13752

to top

>dbj|AB028608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K20I9
          Length = 43500

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 65    atacttcaggagctaatgaaactattt 91
             |||| ||||||||||||||||||||||
Sbjct: 22874 atacctcaggagctaatgaaactattt 22900

to top

>gb|AC157473.1| Medicago truncatula chromosome 7 BAC clone mte1-11e4, complete sequence
          Length = 125310

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 405   atttaaaagggtctgaggttgaa 427
             |||||||||||||||||||||||
Sbjct: 65424 atttaaaagggtctgaggttgaa 65402

to top

>gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosome 10, complete sequence
          Length = 180642

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 466    aaggatgaaagaaatattgtctttcc 491
              |||||||||||||||||| |||||||
Sbjct: 116209 aaggatgaaagaaatattttctttcc 116234

to top

>dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20
          Length = 91193

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 432   attattttgatttcaatttgtt 453
             ||||||||||||||||||||||
Sbjct: 90746 attattttgatttcaatttgtt 90725

to top

>dbj|AB077440.1| Incarvillea potaninii plastid DNA, intron region
          Length = 536

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                         
Query: 404 catttaaaagggtctgaggttgaatcatat 433
           |||||||||||| |||||||||||||||||
Sbjct: 528 catttaaaaggg-ctgaggttgaatcatat 500

to top

>dbj|AB077334.1| Zygophyllum pterocarpum plastid DNA, intron region
          Length = 553

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                         
Query: 404 catttaaaagggtctgaggttgaatcatat 433
           |||||||||||| |||||||||||||||||
Sbjct: 545 catttaaaaggg-ctgaggttgaatcatat 517

to top

>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete sequence
          Length = 217425

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 466    aaggatgaaagaaatattgtctttcc 491
              |||||||||||||||||| |||||||
Sbjct: 184750 aaggatgaaagaaatattttctttcc 184775

to top

>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 145     ccttttgggttgcctttttga 165
               |||||||||||||||||||||
Sbjct: 1617545 ccttttgggttgcctttttga 1617565



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 60     ttataatacttcaggagctaatgaaactatttt 92
              |||||| ||||||||||||| |||||| |||||
Sbjct: 352059 ttataaaacttcaggagctagtgaaacgatttt 352027

to top

>emb|CT009479.4| M.truncatula DNA sequence from clone MTH2-164E3 on chromosome 3,
             complete sequence
          Length = 133351

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 455   tttcaatgcaaaaggatgaaagaaa 479
             ||||||| |||||||||||||||||
Sbjct: 58265 tttcaatacaaaaggatgaaagaaa 58241

to top

>emb|CR753838.10| Zebrafish DNA sequence from clone DKEY-189H5 in linkage group 5,
             complete sequence
          Length = 188660

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    atgaaactattttggtaaaat 100
             |||||||||||||||||||||
Sbjct: 13532 atgaaactattttggtaaaat 13552

to top

>emb|AL606489.26| Human DNA sequence from clone RP11-739N20 on chromosome 1 Contains the
             5' end of the gene for phosphoinositol 3-phosphate-binding
             protein-3 (PEPP3), two novel genes, the  PPP1R15B gene for
             protein phosphatase 1, regulatory (inhibitor) subunit 15B,
             the PIK3C2B gene for phosphoinositide-3-kinase, class 2,
             beta polypeptide, a small nuclear ribonucleoprotein
             polypeptide F (SNRPF) pseudogene and three CpG islands,
             complete sequence
          Length = 167079

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 483   tgtctttccagaaagaaaaac 503
             |||||||||||||||||||||
Sbjct: 87284 tgtctttccagaaagaaaaac 87304

to top

>ref|XM_503361.1| Yarrowia lipolytica CLIB122, YALI0E00154g predicted mRNA
          Length = 2382

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 304 acagcaacaataacatcacca 324
           |||||||||||||||||||||
Sbjct: 263 acagcaacaataacatcacca 283

to top

>emb|AL359821.11| Human DNA sequence from clone RP11-175G14 on chromosome 1 Contains part
             of the NEGR1 gene for neuronal growth regulator 1 and part
             of a novel gene, complete sequence
          Length = 117951

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 472   gaaagaaatattgtctttccagaaa 496
             |||||||||||||||||| ||||||
Sbjct: 43956 gaaagaaatattgtctttacagaaa 43980

to top

>emb|AL355355.25| Human DNA sequence from clone RP11-730A19 on chromosome 10 Contains the
              5' end of a novel gene (DKFZP761F241) (FLJ20925 FLJ38473),
              a ribosomal protein L5 (RPL5) pseudogene, the OPTN gene for
              optineurin, a small nuclear ribonucleoprotein polypeptide G
              (SNRPG) pseudogene, a pseudogene similar to part of COX10
              homolog, cytochrome c oxidase assembly protein heme A:
              farnesyltransferase (yeast) (COX10), a novel pseudogene
              (FLJ10648 KIAA1525), a ribosomal protein L36A (RPL36A)
              pseudogene, the 5' end of the  MCM10 gene for MCM10
              minichromosome maintenance deficient 10 (S. cerevisiae), a
              pseudogene similar to part of chromodomain protein Y
              chromosome 1 (CDY1) and two CpG islands, complete sequence
          Length = 196203

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 441    atttcaatttgttatttcaat 461
              |||||||||||||||||||||
Sbjct: 148025 atttcaatttgttatttcaat 148045

to top

>emb|AL122003.17|HSJ659I19 Human DNA sequence from clone RP4-659I19 on chromosome 1q42.11-42.3
             Contains a chromosome 9 open reading frame 78 (C9orf78)
             pseudogene, a novel gene (MGC13186), the 3' end of a novel
             gene (FLJ11383) and a CpG island, complete sequence
          Length = 155065

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    aatgaaactattttggtaaaa 99
             |||||||||||||||||||||
Sbjct: 66463 aatgaaactattttggtaaaa 66483

to top

>emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment
              1/7
          Length = 340806

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 60     ttataatacttcaggagctaatgaaactatttt 92
              ||||||||||||||| || |||||||| |||||
Sbjct: 109779 ttataatacttcaggtgccaatgaaacgatttt 109811

to top

>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04,
             complete sequence
          Length = 136713

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 442   tttcaatttgttatttcaatgcaaa 466
             ||||||||||| |||||||||||||
Sbjct: 83648 tttcaatttgtaatttcaatgcaaa 83672

to top

>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome
          Length = 195867

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                         
Query: 364   cgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggt 423
             ||||| ||||||||||||   || || ||||| || |||||||||||||  || ||||||
Sbjct: 31433 cgaatgcacatcaatttttttgcaccgctattatcagctacatttaaaatagtttgaggt 31374

                      
Query: 424   tgaatcata 432
              ||||||||
Sbjct: 31373 cgaatcata 31365

to top

>gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complete sequence
          Length = 178378

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 465   aaaggatgaaagaaatattgt 485
             |||||||||||||||||||||
Sbjct: 10896 aaaggatgaaagaaatattgt 10876

to top

>dbj|AK034773.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430035O09 product:RAD17 homolog (S. pombe), full
            insert sequence
          Length = 2615

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 433  ttattttgatttcaatttgtt 453
            |||||||||||||||||||||
Sbjct: 1994 ttattttgatttcaatttgtt 2014

to top

>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 60     ttataatacttcaggagctaatgaaactatttt 92
              ||||||||||||||| || |||||||| |||||
Sbjct: 156967 ttataatacttcaggtgccaatgaaacgatttt 156935



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 434     tattttgatttcaatttgttattt 457
               ||||||||||| ||||||||||||
Sbjct: 1406237 tattttgattttaatttgttattt 1406214

to top

>dbj|AB199893.1| Angelica acutiloba var. iwatensis chloroplast rpl16 gene for
           ribosomal protein large subunit 16, partial cds, and
           rpl16-rpl14 spacer
          Length = 463

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 624 tactccccccatttcataaagtatacgac 652
           |||||| ||||||||||||||||| ||||
Sbjct: 278 tactccacccatttcataaagtattcgac 250

to top

>dbj|AB199892.1| Angelica acutiloba var. sugiyamae chloroplast rpl16 gene for
           ribosomal protein large subunit 16, partial cds, and
           rpl16-rpl14 spacer
          Length = 463

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 624 tactccccccatttcataaagtatacgac 652
           |||||| ||||||||||||||||| ||||
Sbjct: 278 tactccacccatttcataaagtattcgac 250

to top

>dbj|AB199891.1| Angelica acutiloba chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds, and rpl16-rpl14 spacer
          Length = 463

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 624 tactccccccatttcataaagtatacgac 652
           |||||| ||||||||||||||||| ||||
Sbjct: 278 tactccacccatttcataaagtattcgac 250

to top

>gb|AC109358.3| Homo sapiens BAC clone RP11-648D16 from 2, complete sequence
          Length = 49153

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 88    attttggtaaaattcaattct 108
             |||||||||||||||||||||
Sbjct: 27739 attttggtaaaattcaattct 27719

to top

>gb|AC073885.5| Homo sapiens BAC clone RP11-70L16 from 2, complete sequence
          Length = 120379

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    taaaattcaattctctcaatt 115
             |||||||||||||||||||||
Sbjct: 93691 taaaattcaattctctcaatt 93671

to top

>gb|AF283525.1|AF283519S7 Homo sapiens FIP2 gene, exons 11, 12 and 13
          Length = 5047

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 441 atttcaatttgttatttcaat 461
           |||||||||||||||||||||
Sbjct: 151 atttcaatttgttatttcaat 171

to top

>dbj|AK120872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026M09, full
            insert sequence
          Length = 5675

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 442  tttcaatttgttatttcaatgcaaa 466
            ||||||||||| |||||||||||||
Sbjct: 2487 tttcaatttgtaatttcaatgcaaa 2511

to top

>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome
          Length = 2153922

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 60      ttataatacttcaggagctaatgaaactatttt 92
               ||||||||||||||| || |||||||| |||||
Sbjct: 1801391 ttataatacttcaggtgccaatgaaacgatttt 1801423

to top

>emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, complete sequence
          Length = 240928

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     atgaaactattttggtaaaat 100
              |||||||||||||||||||||
Sbjct: 106739 atgaaactattttggtaaaat 106759

to top

>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome
          Length = 191028

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 364    cgaatacacatcaattttcgagctccactattgtctgctac 404
              ||||||||||| | ||||| ||| |||||||| ||||||||
Sbjct: 100999 cgaatacacattatttttctagcgccactattatctgctac 101039

to top

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
            lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 304  acagcaacaataacatcacca 324
            |||||||||||||||||||||
Sbjct: 6095 acagcaacaataacatcacca 6075

to top

>gb|AC165159.2| Mus musculus BAC clone RP23-234N1 from chromosome 13, complete sequence
          Length = 215158

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 433   ttattttgatttcaatttgtt 453
             |||||||||||||||||||||
Sbjct: 79695 ttattttgatttcaatttgtt 79675

to top

>ref|XM_639569.1| Dictyostelium discoideum histidine kinase (DDB0185039), partial mRNA
          Length = 5211

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  cagcaacaataacatcacca 324
            ||||||||||||||||||||
Sbjct: 1427 cagcaacaataacatcacca 1446

to top

>ref|XM_639498.1| Dictyostelium discoideum histidine kinase DhkI (DDB0217151), partial
            mRNA
          Length = 5211

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  cagcaacaataacatcacca 324
            ||||||||||||||||||||
Sbjct: 1427 cagcaacaataacatcacca 1446

to top

>ref|XM_634860.1| Dictyostelium discoideum hypothetical protein (DDB0186277), partial
           mRNA
          Length = 4602

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 434 tattttgatttcaatttgttattt 457
           ||||||||||||||||| ||||||
Sbjct: 413 tattttgatttcaattttttattt 390

to top

>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence
          Length = 182190

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 485    tctttccagaaagaaaaacc 504
              ||||||||||||||||||||
Sbjct: 127972 tctttccagaaagaaaaacc 127953

to top

>gb|AC153856.23| Mus musculus 10 BAC RP23-468J15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 188027

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     tactagtatttataatactt 70
              ||||||||||||||||||||
Sbjct: 140243 tactagtatttataatactt 140224

to top

>gb|AY681321.1| Agelena orientalis toxin-like structure Agel_24 precursor, mRNA,
           complete cds
          Length = 378

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 435 attttgatttcaatttgtta 454
           ||||||||||||||||||||
Sbjct: 245 attttgatttcaatttgtta 264

to top

>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    tctttgattacagcaacaat 314
              ||||||||||||||||||||
Sbjct: 129128 tctttgattacagcaacaat 129147

to top

>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    tattgtctgctacatttaaa 411
              ||||||||||||||||||||
Sbjct: 112737 tattgtctgctacatttaaa 112756

to top

>emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chromosome 16, complete
             sequence
          Length = 212903

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   tctgctacatttaaaagggt 416
             ||||||||||||||||||||
Sbjct: 68129 tctgctacatttaaaagggt 68148

to top

>emb|CR450788.7| Zebrafish DNA sequence from clone DKEY-15P23 in linkage group 12,
             complete sequence
          Length = 115480

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   gtcttcgcatttgaattctt 229
             ||||||||||||||||||||
Sbjct: 71969 gtcttcgcatttgaattctt 71950

to top

>emb|BX005436.12| Zebrafish DNA sequence from clone DKEY-9A8 in linkage group 6, complete
             sequence
          Length = 168549

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   tgattacagcaacaataaca 318
             ||||||||||||||||||||
Sbjct: 82901 tgattacagcaacaataaca 82920

to top

>emb|Z76735.1|HS246O8 Human DNA sequence from clone RP1-246O8 on chromosome X, complete
             sequence
          Length = 175745

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    attaattctttgatctaaat 44
             ||||||||||||||||||||
Sbjct: 99502 attaattctttgatctaaat 99521

to top

>emb|AL603882.13| Human DNA sequence from clone RP11-630I5 on chromosome 1 Contains the
             5' end of the gene for microtubule associated testis
             specific serine/threonine protein kinase (MAST205), a
             ribosomal protein L6 (RPL6) pseudogene and a CpG island,
             complete sequence
          Length = 78745

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   aaatattgtctttccagaaa 496
             ||||||||||||||||||||
Sbjct: 30144 aaatattgtctttccagaaa 30163

to top

>gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosome 9, complete sequence
          Length = 204620

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 485   tctttccagaaagaaaaacc 504
             ||||||||||||||||||||
Sbjct: 21328 tctttccagaaagaaaaacc 21309

to top

>emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome; segment 7/7
          Length = 318136

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   tcaatgcaaaaggatgaaag 476
             ||||||||||||||||||||
Sbjct: 72832 tcaatgcaaaaggatgaaag 72851

to top

>gb|AC159379.14| Mus musculus 10 BAC RP23-210F14 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 226172

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 460   atgcaaaaggatgaaagaaatatt 483
             ||||||||||| ||||||||||||
Sbjct: 40830 atgcaaaaggaagaaagaaatatt 40853

to top

>emb|AL627283.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 19/20
          Length = 249050

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    ttcctcggcaatcgcgccaa 133
              ||||||||||||||||||||
Sbjct: 190554 ttcctcggcaatcgcgccaa 190535

to top

>gb|AC156991.9| Mus musculus chromosome 8, clone RP23-297F23, complete sequence
          Length = 164343

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 474    aagaaatattgtctttccag 493
              ||||||||||||||||||||
Sbjct: 135640 aagaaatattgtctttccag 135659

to top

>emb|BX510930.15| Zebrafish DNA sequence from clone DKEY-91L18 in linkage group 14,
             complete sequence
          Length = 95848

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   aatcatattattttgatttc 445
             ||||||||||||||||||||
Sbjct: 64510 aatcatattattttgatttc 64491

to top

>gb|CP000268.1| Rhodoferax ferrireducens DSM 15236 plasmid1, complete sequence
          Length = 257447

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 321    accaatacgagcatatcgct 340
              ||||||||||||||||||||
Sbjct: 204840 accaatacgagcatatcgct 204859

to top

>gb|AC108100.2| Homo sapiens chromosome 5 clone RP11-125A21, complete sequence
          Length = 85231

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   atttcaatttgttatttcaa 460
             ||||||||||||||||||||
Sbjct: 32554 atttcaatttgttatttcaa 32573

to top

>gb|AC010406.7| Homo sapiens chromosome 5 clone CTD-2154H6, complete sequence
          Length = 95089

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   catttgaattctttacatgt 236
             ||||||||||||||||||||
Sbjct: 65739 catttgaattctttacatgt 65720

to top

>emb|BX664600.7| Zebrafish DNA sequence from clone CH211-112M13, complete sequence
          Length = 167489

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    attaattctttgatctaaat 44
             ||||||||||||||||||||
Sbjct: 80174 attaattctttgatctaaat 80193

to top

>gb|AC159542.8| Mus musculus 10 BAC RP23-137B10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 198525

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 460    atgcaaaaggatgaaagaaatatt 483
              ||||||||||| ||||||||||||
Sbjct: 197474 atgcaaaaggaagaaagaaatatt 197497

to top

>gb|AC136037.2| Rattus norvegicus X BAC CH230-378N18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 98442

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 167   caattataaccgcagcattgtcat 190
             ||||||||||| ||||||||||||
Sbjct: 22762 caattataacctcagcattgtcat 22785

to top

>gb|AC087254.2| Danio rerio clone 91J1, complete sequence
          Length = 77731

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    attaattctttgatctaaat 44
             ||||||||||||||||||||
Sbjct: 59268 attaattctttgatctaaat 59249

to top

>gb|AF362371.1|AF362371 Dictyostelium discoideum histidine kinase DhkI (dhkI) gene, complete
            cds
          Length = 6074

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  cagcaacaataacatcacca 324
            ||||||||||||||||||||
Sbjct: 1666 cagcaacaataacatcacca 1685

to top

>gb|AC103567.2| Caenorhabditis elegans cosmid Y51F10, complete sequence
          Length = 89249

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 78    taatgaaactattttggtaaaatt 101
             |||||||||| |||||||||||||
Sbjct: 60315 taatgaaacttttttggtaaaatt 60338

to top

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 364   cgaatacacatcaattttcgagctccactattgtctgctacatt 407
             ||||||||||| | ||||  ||| |||||||| |||||||||||
Sbjct: 15771 cgaatacacattatttttttagcgccactattatctgctacatt 15814

to top

>gb|AC116330.2| Dictyostelium discoideum chromosome 2 map 3191214-3323468 strain AX4,
             complete sequence
          Length = 132254

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   cagcaacaataacatcacca 324
             ||||||||||||||||||||
Sbjct: 42174 cagcaacaataacatcacca 42155

to top

>gb|AC010423.8| Homo sapiens chromosome 5 clone CTD-2193G5, complete sequence
          Length = 183787

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    catttgaattctttacatgt 236
              ||||||||||||||||||||
Sbjct: 143582 catttgaattctttacatgt 143601

to top

>gb|AE016754.1| Mus musculus chromosome 10 high-growth region, section 2 of 2 of the
              complete sequence
          Length = 303688

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 460    atgcaaaaggatgaaagaaatatt 483
              ||||||||||| ||||||||||||
Sbjct: 256147 atgcaaaaggaagaaagaaatatt 256124

to top

>emb|BX511028.13| Zebrafish DNA sequence from clone DKEY-161N17 in linkage group 20,
              complete sequence
          Length = 225010

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     attaattctttgatctaaat 44
              ||||||||||||||||||||
Sbjct: 146084 attaattctttgatctaaat 146065

to top

>emb|CT010464.7| M.truncatula DNA sequence from clone MTH2-95O22 on chromosome 3,
             complete sequence
          Length = 117153

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   tattttgatttcaatttgttattt 457
             ||||||| ||||||||||||||||
Sbjct: 28243 tattttgttttcaatttgttattt 28266

to top

>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 114     ttcctcggcaatcgcgccaa 133
               ||||||||||||||||||||
Sbjct: 4645443 ttcctcggcaatcgcgccaa 4645424


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,811,620
Number of Sequences: 3902068
Number of extensions: 6811620
Number of successful extensions: 142877
Number of sequences better than 10.0: 257
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 139718
Number of HSP's gapped (non-prelim): 3077
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result