| Clone Name | rbags25e02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CALX_SOYBN (Q39817) Calnexin homolog precursor | 77 | 5e-14 | 2 | CALX_PEA (O82709) Calnexin homolog precursor | 73 | 5e-13 | 3 | CALX_HELTU (Q39994) Calnexin homolog precursor | 70 | 6e-12 | 4 | CALX2_ARATH (Q38798) Calnexin homolog 2 precursor | 69 | 8e-12 | 5 | CALX1_ARATH (P29402) Calnexin homolog 1 precursor | 60 | 4e-09 | 6 | SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs... | 32 | 1.8 | 7 | KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-ass... | 31 | 3.1 | 8 | ZNF77_HUMAN (Q15935) Zinc finger protein 77 (ZNFpT1) | 30 | 4.0 |
|---|
>CALX_SOYBN (Q39817) Calnexin homolog precursor| Length = 546 Score = 76.6 bits (187), Expect = 5e-14 Identities = 36/53 (67%), Positives = 42/53 (79%) Frame = -3 Query: 517 LYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 359 LYKIADIPFL +K KI DLIEK EKQPN+TI IL +V V+ V++ FR IFGG Sbjct: 445 LYKIADIPFLSEHKSKIFDLIEKAEKQPNLTIGILVAVVVVFVSIFFRLIFGG 497
>CALX_PEA (O82709) Calnexin homolog precursor| Length = 551 Score = 73.2 bits (178), Expect = 5e-13 Identities = 34/53 (64%), Positives = 42/53 (79%) Frame = -3 Query: 517 LYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 359 LYKIADI FL K KII++IEKGEKQPN+TI I+ SV ++ V++ FR IFGG Sbjct: 450 LYKIADIAFLSGQKEKIIEIIEKGEKQPNLTIGIIVSVVIVFVSIFFRLIFGG 502
>CALX_HELTU (Q39994) Calnexin homolog precursor| Length = 540 Score = 69.7 bits (169), Expect = 6e-12 Identities = 28/53 (52%), Positives = 43/53 (81%) Frame = -3 Query: 517 LYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 359 LYKIAD+PFL +K+K+++LIEK E QPNITI ++ S+ V++ ++L + +FGG Sbjct: 439 LYKIADLPFLGDHKVKVLELIEKAETQPNITIGVIVSIIVVIFSILLKLLFGG 491
>CALX2_ARATH (Q38798) Calnexin homolog 2 precursor| Length = 532 Score = 69.3 bits (168), Expect = 8e-12 Identities = 32/74 (43%), Positives = 45/74 (60%) Frame = -3 Query: 517 LYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGGXXXXXXX 338 LYK+ADI FL YK KI++LIEK E QPN+TI +L S+ ++ +++ F+ IFGG Sbjct: 438 LYKVADISFLSAYKSKIMELIEKAETQPNLTIGVLISIVIVFLSLFFKLIFGGAKAKVEK 497 Query: 337 XXXXXXXXPSATEA 296 S +EA Sbjct: 498 KKPETAAETSTSEA 511
>CALX1_ARATH (P29402) Calnexin homolog 1 precursor| Length = 530 Score = 60.5 bits (145), Expect = 4e-09 Identities = 26/53 (49%), Positives = 38/53 (71%) Frame = -3 Query: 517 LYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 359 L K+AD+ FL YK KI +LIEK E+QPN+TI +L ++ V+ ++ + IFGG Sbjct: 436 LNKVADLSFLSAYKSKITELIEKAEQQPNLTIGVLVAIVVVFFSLFLKLIFGG 488
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 31.6 bits (70), Expect = 1.8 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = -2 Query: 416 FGLSCCHPCYCALQNHFRWQEGSGTCEA----RCCGEEAQCHGSRC 291 +G C CYC+ + Q G+ C A R C + C+ S C Sbjct: 177 WGAQCASACYCSATSRCDPQTGACLCHAGWWGRSCNNQCACNSSPC 222
>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein| 5.6) (Ultrahigh sulfur keratin-associated protein 5.6) Length = 129 Score = 30.8 bits (68), Expect = 3.1 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -2 Query: 407 SCCHPCYCALQNHFRWQEGSGTCEARCC 324 SCC PCYC+ GS C++ CC Sbjct: 89 SCCKPCYCSSGC------GSSCCQSSCC 110
>ZNF77_HUMAN (Q15935) Zinc finger protein 77 (ZNFpT1)| Length = 545 Score = 30.4 bits (67), Expect = 4.0 Identities = 10/32 (31%), Positives = 17/32 (53%) Frame = -2 Query: 392 CYCALQNHFRWQEGSGTCEARCCGEEAQCHGS 297 CY + ++H R G C+ + CG+ C+ S Sbjct: 307 CYSSFRDHVRTHTGEKPCQCKHCGKAFTCYSS 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,167,132 Number of Sequences: 219361 Number of extensions: 1053238 Number of successful extensions: 3302 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3297 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)