ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags24o22 |
|---|---|
| Clone Library Name | barley_pub |
>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (Neural-specific SR pro Length = 262 Score = 31.6 bits (70), Expect = 0.49 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 5/117 (4%) Frame = +3 Query: 27 NGTPSTRP*DRFRIHN-----AHRGYMNTTNTSNSRQINYNESKIKLKRVSRLEARAYDQ 191 N P+ RP R R H+ HR + + SNSR + ++ K ++K SR + ++ + Sbjct: 146 NSRPTGRP-RRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSRSRSASHTK 204 Query: 192 PKTKSRT*TMARVRGYSRYATRQVQSGKLVRKLVKRPMMTQASRMTSTSEEKSHVSS 362 + S+T + + SRY + + P SR S S KS S Sbjct: 205 TRGTSKTDSKTHYKSGSRYEKES--------RKKEPPRSKSQSRSQSRSRSKSRSRS 253
>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (40 kDa SR-repressor pr Length = 262 Score = 31.6 bits (70), Expect = 0.49 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 5/117 (4%) Frame = +3 Query: 27 NGTPSTRP*DRFRIHN-----AHRGYMNTTNTSNSRQINYNESKIKLKRVSRLEARAYDQ 191 N P+ RP R R H+ HR + + SNSR + ++ K ++K SR + ++ + Sbjct: 146 NSRPTGRP-RRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSRSRSASHTK 204 Query: 192 PKTKSRT*TMARVRGYSRYATRQVQSGKLVRKLVKRPMMTQASRMTSTSEEKSHVSS 362 + S+T + + SRY + + P SR S S KS S Sbjct: 205 TRGTSKTDSKTHYKSGSRYEKES--------RKKEPPRSKSQSRSQSRSRSKSRSRS 253
>S19A3_MOUSE (Q99PL8) Thiamine transporter 2 (ThTr-2) (ThTr2) (Solute carrier| family 19 member 3) Length = 488 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 6/85 (7%) Frame = -1 Query: 367 FRELTWDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLL------YPLTLAIVYVL 206 + ++ WD E+ + + + VI G S +W C YLL + +T+A+ + Sbjct: 330 YLKVNWDLLGELGLAVFSAVIAGSLFLMNYSRSIWVCYAGYLLVKSSYSFLITIAVFQIA 389 Query: 205 DFVFGWS*ARASSLDTRLSLIFDSL 131 + A +DT ++L+ ++ Sbjct: 390 VNLSLERYALVFGIDTFIALVIQTI 414
>GCY31_CAEEL (Q86C56) Soluble guanylate cyclase gcy-31 (EC 4.6.1.2)| Length = 702 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/54 (27%), Positives = 24/54 (44%) Frame = +2 Query: 197 DEVEDVNDXXXXXXXXXXHQTGPEREAGPEACEEAHDDTGEQDDEHLRREVPRQ 358 +E+E + D + GP R P CE DD+ +DD+ +PR+ Sbjct: 596 EEIE-IKDDQTIQTFFVVSRHGPHRVPSPRNCESRQDDSQTEDDDDDELLLPRK 648
>VME1_CVTKE (P26021) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 230 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/58 (24%), Positives = 33/58 (56%), Gaps = 5/58 (8%) Frame = -1 Query: 352 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 194 W+FS ++++ + ++ +TS S + ++ +L++PLT+ + VY L+ V+ Sbjct: 25 WNFSLGIILLFITIILQFGYTSRSMSVYVIKMIILWLMWPLTIILTIFNCVYALNNVY 82
>SPT7_YEAST (P35177) Transcriptional activator SPT7| Length = 1332 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/66 (31%), Positives = 29/66 (43%) Frame = +2 Query: 140 KNQTQACVQTRSTSL*PTEDEVEDVNDXXXXXXXXXXHQTGPEREAGPEACEEAHDDTGE 319 KN+ Q V+ S TED +D + +T +EAG E EE DD E Sbjct: 655 KNEEQDMVEESSK----TEDSSKDADAAKKDTEDGLQDKTAENKEAG-ENNEEEEDDDDE 709 Query: 320 QDDEHL 337 +DE + Sbjct: 710 DEDEDM 715
>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22| Length = 907 Score = 25.0 bits (53), Expect(2) = 3.1 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 2/82 (2%) Frame = +3 Query: 18 THTNGTPSTRP*DRFRIHNAHRGYMNTTNTSNSRQINY--NESKIKLKRVSRLEARAYDQ 191 T ++ + S P R R ++ R T +NS N + S+ + +SR + A + Sbjct: 664 TGSSYSRSRSPSPRRRSYSRSRSRSVTPRRTNSNGRNNARSPSRSVSRSISRSRSPAPIR 723 Query: 192 PKTKSRT*TMARVRGYSRYATR 257 ++ SR+ + +R R YSR +R Sbjct: 724 GRSYSRSVSRSRSRSYSRSVSR 745 Score = 22.3 bits (46), Expect(2) = 3.1 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 247 TPPDRSRAGSWSGSL*RGP**HRRAG*RAPPKRSPTSA 360 TP DRSR+ S+S S R P R+ R+P + P ++ Sbjct: 766 TPSDRSRSRSYSRS--RSP--RGRSYTRSPDRAGPQAS 799
>LGT_CAUCR (Q9AAV1) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 302 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -3 Query: 332 ARHPARLCHHGPLHKLPDQLPALDLSG 252 A HP R+C GPL + P QL L G Sbjct: 185 ANHPQRICPAGPLPRHPSQLYEAALEG 211
>CCKAR_XENLA (P70031) Cholecystokinin receptor (CCK-XLR)| Length = 453 Score = 28.9 bits (63), Expect = 3.2 Identities = 20/84 (23%), Positives = 38/84 (45%) Frame = -1 Query: 334 VLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAIVYVLDFVFGWS*ARASSLDTR 155 ++V+++ + + SF S L +VA L P TL + +F+FG RA++ Sbjct: 90 IIVLVMNKRLRTITNSFLLSLALSDLMVAVLCMPFTLIPNLMENFIFGEVICRAAAYFMG 149 Query: 154 LSLIFDSL*FICLEFEVFVVFIYP 83 LS+ + + + E + P Sbjct: 150 LSVSVSTFNLVAISIERYSAICNP 173
>HDA1B_XENLA (O42227) Probable histone deacetylase 1-B (HD1) (RPD3 homolog)| Length = 480 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +2 Query: 191 TEDEVEDVNDXXXXXXXXXXHQTGPEREAGPEACEEAHDDTGEQDDE 331 T + +E + H G + +A PE + HDD+GE+D+E Sbjct: 355 TNEYLEKIKQRLFENLRMLPHAPGVQMQAIPE--DSVHDDSGEEDEE 399
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Frame = -1 Query: 331 LVILLACVIMGLFTSFRTSFPLWTCLVAYL---LYPLTLAIVYVLDFVFGWS*ARASSLD 161 +VI+L +I+G+F +RT+ P+ +L + + A ++LD W + Sbjct: 263 IVIVLRLIILGVFLHYRTTHPVKDAYALWLTSVICEIWFAFSWLLDQFPKWYPINRETFL 322 Query: 160 TRLSLIFD 137 RL+L +D Sbjct: 323 DRLALRYD 330
>UL34_HCMVA (P16812) Hypothetical protein UL34| Length = 407 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +2 Query: 275 AGPEACEEAHDDTGEQDDEHLRREVPRQLPE 367 AGP +E +D+ GE+DD+ LR P L E Sbjct: 269 AGPPEADENNDE-GEEDDDELRHSDPAPLHE 298
>ESCO1_HUMAN (Q5FWF5) N-acetyltransferase ESCO1 (EC 2.3.1.-) (Establishment of| cohesion 1 homolog 1) (ECO1 homolog 1) (ESO1 homolog 1) (Establishment factor-like protein 1) (EFO1p) (hEFO1) (CTF7 homolog 1) Length = 840 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 12/94 (12%) Frame = +3 Query: 99 TNTSNSRQINYNESKIKLKRVSRLEARAYDQPKTKSRT*TMARVRGYSRYATRQVQSGK- 275 + +S + N+ +++ + +R A + TKS VRGYS+ +T++ S K Sbjct: 47 SQAKSSSESKINQPELETRMSTRSSKAASNDKATKSINKNTVTVRGYSQESTKKKLSQKK 106 Query: 276 -----------LVRKLVKRPMMTQASRMTSTSEE 344 L R+ + +T+ SR + S E Sbjct: 107 LVHENPKANEQLNRRSQRLQQLTEVSRRSLRSRE 140
>CYSZ_PSESM (Q887V6) Protein cysZ homolog| Length = 253 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/30 (33%), Positives = 20/30 (66%) Frame = -1 Query: 289 SFRTSFPLWTCLVAYLLYPLTLAIVYVLDF 200 +F + P W ++Y+L+PL +A+V ++ F Sbjct: 56 TFMPTLPHWLSFLSYILWPLFVALVLLMVF 85
>LT01_HORVU (P68179) Low temperature-induced protein lt101.1 (Blt101)| (Blt101.1) Length = 54 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = -1 Query: 343 SSEVLVILLACVI--MGLFTSFRTSFPLWTCLVAYLL--YPLTLAIVYVL 206 S+ VL ++LA ++ +G+F ++ W CL+ +L P + VYVL Sbjct: 3 SATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVL 52
>ESI3_LOPEL (P68178) Salt stress-induced hydrophobic peptide ESI3| Length = 54 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = -1 Query: 343 SSEVLVILLACVI--MGLFTSFRTSFPLWTCLVAYLL--YPLTLAIVYVL 206 S+ VL ++LA ++ +G+F ++ W CL+ +L P + VYVL Sbjct: 3 SATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVL 52
>NRAM1_CANFA (Q9XT74) Natural resistance-associated macrophage protein 1 (NRAMP| 1) Length = 547 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -1 Query: 334 VLVILLACVIMGLFTSFRTSFPLWTCLVAY 245 +LV LLA V +GL T++ +WTC +A+ Sbjct: 495 ILVALLAIVYLGL-----TTYLVWTCFIAH 519
>VME1_CVP67 (Q8BB24) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 230 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = -1 Query: 352 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 194 W+FS ++V+ + ++ +TS + ++ +L++PLT+ + VY L+ V+ Sbjct: 25 WNFSLGIIVLFITIILQFGYTSRSMFVYVIKMVILWLMWPLTIILTIFNCVYALNNVY 82
>VME1_CVMA5 (P03415) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 228 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = -1 Query: 352 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 194 W+FS ++++ + ++ +TS + ++ +L++PLT+ + VY L+ V+ Sbjct: 26 WNFSLGIILLFITIILQFGYTSRSMFIYVVKMIILWLMWPLTIVLCIFNCVYALNNVY 83
>NRAM1_PIG (O77741) Natural resistance-associated macrophage protein 1 (NRAMP| 1) Length = 538 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -1 Query: 331 LVILLACVIMGLFTSFRTSFPLWTCLVAY 245 LV LLA + +GL T++ +WTCL+A+ Sbjct: 496 LVALLAVIYLGL-----TTYLVWTCLIAH 519
>S19A2_HUMAN (O60779) Thiamine transporter 1 (ThTr-1) (ThTr1) (Thiamine carrier| 1) (TC1) (Solute carrier family 19 member 2) Length = 497 Score = 27.7 bits (60), Expect = 7.1 Identities = 19/91 (20%), Positives = 38/91 (41%) Frame = -1 Query: 361 ELTWDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAIVYVLDFVFGWS* 182 +++W E+ + L + +I T +W C +Y+++ I+Y+L Sbjct: 355 KISWSTWGEMTLSLFSLLIAAAVYIMDTVGNIWVCYASYVVF----RIIYMLLITIATFQ 410 Query: 181 ARASSLDTRLSLIFDSL*FICLEFEVFVVFI 89 A+ R +L+F FI L + + I Sbjct: 411 IAANLSMERYALVFGVNTFIALALQTLLTLI 441
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 23.5 bits (49), Expect(2) = 8.7 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = +2 Query: 263 PEREAGPEACEEAHDDTGEQDDE 331 PE GPE E A D +DD+ Sbjct: 555 PEHRGGPEEFEGAGDGEPPEDDD 577 Score = 22.3 bits (46), Expect(2) = 8.7 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +1 Query: 223 PGSEGTAGTPP 255 PG+ GTA TPP Sbjct: 522 PGTRGTARTPP 532
>GTRA_BPSF5 (O22008) Bactoprenol-linked glucose translocase (Flippase)| Length = 120 Score = 27.3 bits (59), Expect = 9.2 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = -1 Query: 319 LACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAIVYVLDFVFGWS*ARASSLDTRLSLI- 143 + V F + R +F T + Y+LY + + +L + GW+ A SL ++LI Sbjct: 43 VVAVSFSFFANARFTFKASTTAMRYMLY---VGFMGILSVIVGWA-ADKCSLPPIVTLIT 98 Query: 142 FDSL*FIC-LEFEVFVVF 92 F ++ +C + F+VF Sbjct: 99 FSAISLVCGFVYSKFIVF 116
>AGRN_DISOM (Q90404) Agrin (Fragment)| Length = 1328 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +1 Query: 220 WPGSEGTAGTPPDRSRAGSWSG 285 WP S T+ PPD S +G +SG Sbjct: 327 WPPSSLTSSEPPDLSGSGDFSG 348
>NIA2_PHAVU (P39866) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2)| Length = 890 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 279 VRKLVKRPMMTQASRMTSTSEEKSHVS 359 ++K V P M AS+M S SE K H S Sbjct: 500 LKKSVSTPFMNTASKMFSVSEVKKHSS 526
>SYGB_STRR6 (Q8DP66) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 678 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -1 Query: 247 YLLYPLTLAIVYVLDFVFGWS*ARASSLDTRLSLIFDSL 131 Y L T +V +LD FGW A +D+ +L FDSL Sbjct: 477 YALRRATQGVVRILD-AFGWHIAMDELIDSLYALKFDSL 514
>SYGB_STRPN (Q97PW6) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 678 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -1 Query: 247 YLLYPLTLAIVYVLDFVFGWS*ARASSLDTRLSLIFDSL 131 Y L T +V +LD FGW A +D+ +L FDSL Sbjct: 477 YALRRATQGVVRILD-AFGWHIAMDELIDSLYALKFDSL 514
>VME1_CVHOC (Q01455) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 230 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = -1 Query: 352 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 194 W+FS ++++ + ++ +TS + ++ +L++PLT+ + VY L+ V+ Sbjct: 25 WNFSLGIILLFITIILQFGYTSRSMFVYVIKMIILWLMWPLTIILTIFNCVYALNNVY 82
>VME1_CVBQ (P69705) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 230 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = -1 Query: 352 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 194 W+FS ++++ + ++ +TS + ++ +L++PLT+ + VY L+ V+ Sbjct: 25 WNFSLGIILLFITIILQFGYTSRSMFVYVIKMIILWLMWPLTIILTIFNCVYALNNVY 82
>VME1_CVBOK (P69600) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 230 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = -1 Query: 352 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 194 W+FS ++++ + ++ +TS + ++ +L++PLT+ + VY L+ V+ Sbjct: 25 WNFSLGIILLFITVILQFGYTSRSMFVYVIKMIILWLMWPLTIILTIFNCVYALNNVY 82
>VME1_CVBM (P69704) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 230 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = -1 Query: 352 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 194 W+FS ++++ + ++ +TS + ++ +L++PLT+ + VY L+ V+ Sbjct: 25 WNFSLGIILLFITIILQFGYTSRSMFVYVIKMIILWLMWPLTIILTIFNCVYALNNVY 82
>VME1_CVBLY (Q9QAR9) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 230 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = -1 Query: 352 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 194 W+FS ++++ + ++ +TS + ++ +L++PLT+ + VY L+ V+ Sbjct: 25 WNFSLGIILLFITIILQFGYTSRSMFVYVIKMIILWLMWPLTIILTIFNCVYALNNVY 82
>VME1_CVBLU (Q8V433) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 230 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = -1 Query: 352 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 194 W+FS ++++ + ++ +TS + ++ +L++PLT+ + VY L+ V+ Sbjct: 25 WNFSLGIILLFITVILQFGYTSRSMFVYVIKMIILWLMWPLTIILTIFNCVYALNNVY 82
>VME1_CVBLS (P69599) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 230 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = -1 Query: 352 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 194 W+FS ++++ + ++ +TS + ++ +L++PLT+ + VY L+ V+ Sbjct: 25 WNFSLGIILLFITVILQFGYTSRSMFVYVIKMIILWLMWPLTIILTIFNCVYALNNVY 82
>VME1_CVBF (P69703) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 230 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = -1 Query: 352 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 194 W+FS ++++ + ++ +TS + ++ +L++PLT+ + VY L+ V+ Sbjct: 25 WNFSLGIILLFITIILQFGYTSRSMFVYVIKMIILWLMWPLTIILTIFNCVYALNNVY 82
>S19A3_HUMAN (Q9BZV2) Thiamine transporter 2 (ThTr-2) (ThTr2) (Solute carrier| family 19 member 3) Length = 496 Score = 27.3 bits (59), Expect = 9.2 Identities = 9/42 (21%), Positives = 20/42 (47%) Frame = -1 Query: 361 ELTWDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLY 236 ++ WD E+ +++ + V G + +W C YL++ Sbjct: 338 KVNWDLLGELALVVFSVVNAGSLFLMHYTANIWACYAGYLIF 379 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,946,338 Number of Sequences: 219361 Number of extensions: 947308 Number of successful extensions: 3217 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3027 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3212 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
