ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25d21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103362.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 9e-92
2dbj|AK063160.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 2e-89
3gb|AY105913.1| Zea mays PCO070246 mRNA sequence 280 4e-72
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 119 9e-24
5gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome... 119 9e-24
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 119 9e-24
7ref|XM_470247.1| Oryza sativa (japonica cultivar-group), predic... 117 4e-23
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
10emb|AL732641.5|CNS08C9G Oryza sativa chromosome 12, . BAC OSJNBb... 58 3e-05
11ref|NM_179172.2| Arabidopsis thaliana unknown protein AT4G35920 ... 50 0.007
12ref|NM_119759.2| Arabidopsis thaliana unknown protein AT4G35920 ... 50 0.007
13ref|NM_179173.3| Arabidopsis thaliana unknown protein AT4G35920 ... 50 0.007
14emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, ... 50 0.007
15emb|AL022373.1|ATT19K4 Arabidopsis thaliana DNA chromosome 4, BA... 50 0.007
16gb|AY136293.1| Arabidopsis thaliana putative protein (At4g35920)... 50 0.007
17gb|AY133604.1| Arabidopsis thaliana AT4g35920/F4B14_190 mRNA, co... 50 0.007
18gb|AF367322.1| Arabidopsis thaliana AT4g35920/F4B14_190 mRNA, co... 50 0.007
19emb|BX826751.1|CNS0A435 Arabidopsis thaliana Full-length cDNA Co... 50 0.007
20gb|BT003430.1| Arabidopsis thaliana putative protein (At4g35920)... 50 0.007
21emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BA... 50 0.007
22dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
23dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
24gb|AC146008.3| Pan troglodytes BAC clone RP43-13N15 from 7, comp... 44 0.44
25gb|AC004852.2| Homo sapiens PAC clone RP4-668E10 from 7, complet... 44 0.44
26gb|AC146009.3| Pan troglodytes BAC clone RP43-13O12 from chromos... 44 0.44
27emb|BX548066.3| Zebrafish DNA sequence from clone CH211-226F1 in... 44 0.44
28gb|AC164177.6| Mus musculus 10 BAC RP23-102O12 (Roswell Park Can... 42 1.7
29gb|AC159133.2| Pan troglodytes BAC clone CH251-51M20 from chromo... 42 1.7
30gb|AC022431.6| Homo sapiens chromosome 5 clone CTD-2583B1, compl... 42 1.7
31gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Canc... 42 1.7
32dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
34gb|AC157484.2| Pan troglodytes BAC clone CH251-301F2 from chromo... 42 1.7
35dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
36dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
37dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
38dbj|AK102912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
39gb|AC125071.3| Mus musculus BAC clone RP23-453O8 from chromosome... 40 6.8
40emb|CR974458.2| Pig DNA sequence from clone CH242-29M17 on chrom... 40 6.8
41emb|AL356295.9| Human DNA sequence from clone RP11-768P11 on chr... 40 6.8
42emb|AL109804.41|HS1009E24 Human DNA sequence from clone RP5-1009... 40 6.8
43gb|AC124909.3| Equus caballus clone CH241-91H15, complete sequence 40 6.8
44emb|X64346.1|HSGEND Saimiriine herpesvirus 2 complete genome 40 6.8
45emb|BX294144.1| Pirellula sp. strain 1 complete genome; segment ... 40 6.8
46emb|AJ410493.1|SHE410493 Saimiriine herpesvirus 2 complete L-DNA... 40 6.8
47gb|AC116335.2| Homo sapiens chromosome 5 clone CTD-2297M2, compl... 40 6.8
48dbj|AK134097.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 6.8
49gb|DP000030.1| Sus scrofa target 116 genomic scaffold 40 6.8
50dbj|AP006436.1| Sus scrofa CC chemokine receptor genes(CCR3, CCR... 40 6.8
51gb|AC019067.9| Homo sapiens BAC clone RP11-171B14 from 2, comple... 40 6.8
52gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, com... 40 6.8
53gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 m... 40 6.8
54emb|AJ131939.1|SHE131939 Herpesvirus saimiri SHV2 C488 ORF56 (pa... 40 6.8
55gb|AC150802.3| Equus caballus clone CH241-121C14, complete sequence 40 6.8
56gb|AC163707.3| Gallus gallus BAC clone CH261-71N11 from chromoso... 40 6.8
57gb|AC159649.3| Mus musculus BAC clone RP23-46D6 from chromosome ... 40 6.8
58gb|CP000190.1| Drosophila melanogaster genomic scaffold 21100002... 40 6.8
59gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, co... 40 6.8
60gb|AC093241.4| Homo sapiens chromosome 5 clone RP11-104B22, comp... 40 6.8
61gb|U60494.1|NTU60494 Nicotiana tabacum actin (Tob104) gene, part... 40 6.8
62gb|DP000020.1| Equus caballus target 1 genomic scaffold 40 6.8
63gb|M21943.1|HSV52K Hepesvirus saimiri 52 kDa immediate-early pho... 40 6.8
64gb|M86409.1|HSV3PRGEN Herpesvirus saimiri the most three prime e... 40 6.8 
>dbj|AK103362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126N07, full
            insert sequence
          Length = 2101

 Score =  345 bits (174), Expect = 9e-92
 Identities = 375/443 (84%), Gaps = 1/443 (0%)
 Strand = Plus / Minus

                                                                        
Query: 62   ccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatcacatgt 121
            ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 1822 ccacgaatctcaacttcccgccattcttgaacaagcgcacagcaacaacacatcaaatgt 1763

                                                                        
Query: 122  gaaaggaaatcatcacagcaccctcccgcaatatttagcctttgacgaagctttctcctt 181
            || ||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||| 
Sbjct: 1762 gataggaaatcatcaatgcaacctcccgcaatatttagcttttgacgaagctttctcctc 1703

                                                                        
Query: 182  acacagcaagtgtaacagcaacaagacaatatgagggagtacgccataatatcattgcag 241
            ||||||||||||||||| || || || ||||| ||||| || ||||||||||||||||| 
Sbjct: 1702 acacagcaagtgtaacaacagcaggataatatcagggaatatgccataatatcattgcat 1643

                                                                        
Query: 242  gcttctcccgaagacatgggcttgtttttggcgattgaagcaatccttgagaatgttcca 301
            |||||   ||| ||||||||| |||| || || |||||||||||| ||||||||||||||
Sbjct: 1642 gcttccgacgatgacatgggcctgttcttcgcaattgaagcaatctttgagaatgttcca 1583

                                                                        
Query: 302  catggnnnnnnngaaggtcttcagacacagagctggctctgaacagcaaccaagtaaatc 361
            || ||       ||| ||  ||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 1582 ca-ggggaaaaagaatgttctcaaacacaaagatggctctgaacagcaaccaagcaaatc 1524

                                                                        
Query: 362  tgcatgccactcatcactgtatgatgctgtactcgagaccagatcgtggttgtagggaac 421
            |||||||||||| || ||||||||| || | || ||||||||||| |||   || | |  
Sbjct: 1523 tgcatgccactcgtcgctgtatgatcctctgcttgagaccagatcatggccataagaaga 1464

                                                                        
Query: 422  aggtgaagaactccgtggtgcaacataggcatctttttgcttctttggagagtcatcatc 481
             || | |||||| |||||||||    ||||||| ||||||||||||||||||||||||| 
Sbjct: 1463 tggcggagaacttcgtggtgcagtgcaggcatccttttgcttctttggagagtcatcatg 1404

                                   
Query: 482  atacgattttgcactgtcttcac 504
            ||| | ||||||||| |||||||
Sbjct: 1403 atatgtttttgcactatcttcac 1381
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>dbj|AK063160.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H09, full
            insert sequence
          Length = 1879

 Score =  337 bits (170), Expect = 2e-89
 Identities = 374/443 (84%), Gaps = 1/443 (0%)
 Strand = Plus / Minus

                                                                        
Query: 62   ccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatcacatgt 121
            ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 1598 ccacgaatctcaactttccgccattcttgaacaagcgcacagcaacaacacatcaaatgt 1539

                                                                        
Query: 122  gaaaggaaatcatcacagcaccctcccgcaatatttagcctttgacgaagctttctcctt 181
            || ||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||| 
Sbjct: 1538 gataggaaatcatcaatgcaacctcccgcaatatttagcttttgacgaagctttctcctc 1479

                                                                        
Query: 182  acacagcaagtgtaacagcaacaagacaatatgagggagtacgccataatatcattgcag 241
            ||||||||||||||||| || || || ||||| ||||| || ||||||||||||||||| 
Sbjct: 1478 acacagcaagtgtaacaacagcaggataatatcagggaatatgccataatatcattgcat 1419

                                                                        
Query: 242  gcttctcccgaagacatgggcttgtttttggcgattgaagcaatccttgagaatgttcca 301
            |||||   ||| ||||||||| |||| || || |||||||||||| ||||||||||||||
Sbjct: 1418 gcttccgacgatgacatgggcctgttcttcgcaattgaagcaatctttgagaatgttcca 1359

                                                                        
Query: 302  catggnnnnnnngaaggtcttcagacacagagctggctctgaacagcaaccaagtaaatc 361
            || ||       ||| ||  ||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 1358 ca-ggggaaaaagaatgttctcaaacacaaagatggctctgaacagcaaccaagcaaatc 1300

                                                                        
Query: 362  tgcatgccactcatcactgtatgatgctgtactcgagaccagatcgtggttgtagggaac 421
            |||||||||||| || ||||||||| || | || ||||||||||| |||   || | |  
Sbjct: 1299 tgcatgccactcgtcgctgtatgatcctctgcttgagaccagatcatggccataagaaga 1240

                                                                        
Query: 422  aggtgaagaactccgtggtgcaacataggcatctttttgcttctttggagagtcatcatc 481
             || | |||||| |||||||||    ||||||| ||||||||||||||||||||||||| 
Sbjct: 1239 tggcggagaacttcgtggtgcagtgcaggcatccttttgcttctttggagagtcatcatg 1180

                                   
Query: 482  atacgattttgcactgtcttcac 504
            ||| | ||||||||| |||||||
Sbjct: 1179 atatgtttttgcactatcttcac 1157
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>gb|AY105913.1| Zea mays PCO070246 mRNA sequence
          Length = 1089

 Score =  280 bits (141), Expect = 4e-72
 Identities = 291/342 (85%), Gaps = 1/342 (0%)
 Strand = Plus / Minus

                                                                       
Query: 65  cgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatcacatgtgaa 124
           |||||||| |||||||||||||||||||||||||| |||||||| |||| || |||||||
Sbjct: 756 cgaatctcaacttcccgccattcttgaacaagcgcgcagcaacaacacagcagatgtgaa 697

                                                                       
Query: 125 aggaaatcatcacagcaccctcccgcaatatttagcctttgacgaagctttctccttaca 184
           ||||| || |||||||| ||||||||||| |  | | |||||||||||||||||||||||
Sbjct: 696 aggaagtcgtcacagcagcctcccgcaatgtccaacttttgacgaagctttctccttaca 637

                                                                       
Query: 185 cagcaagtgtaacagcaacaagacaatatgagggagtacgccataatatcattgcaggct 244
           ||||| || |||||||| || |||||||| |||||||||||||||||||||||||| || 
Sbjct: 636 cagcatgtataacagcagcaggacaatattagggagtacgccataatatcattgcaagcc 577

                                                                       
Query: 245 tctcccgaagacatgggcttgtttttggcgattgaagcaatccttgagaatgttccacat 304
           || || |||||||| ||| |||  ||||||||||||||||| || ||||| |||||||| 
Sbjct: 576 tccccagaagacattggcctgtccttggcgattgaagcaattctcgagaaggttccaca- 518

                                                                       
Query: 305 ggnnnnnnngaaggtcttcagacacagagctggctctgaacagcaaccaagtaaatctgc 364
           ||        |||||||||| ||||| ||| || ||||||||||| ||||||||||||||
Sbjct: 517 ggggaagaacaaggtcttcaaacacaaagccggttctgaacagcagccaagtaaatctgc 458

                                                     
Query: 365 atgccactcatcactgtatgatgctgtactcgagaccagatc 406
           |||||| || || ||||| ||| || |||| ||||| |||||
Sbjct: 457 atgccattcgtcgctgtacgatcctctacttgagacaagatc 416
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  119 bits (60), Expect = 9e-24
 Identities = 90/100 (90%)
 Strand = Plus / Minus

                                                                           
Query: 147     ccgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaacaag 206
               |||||||||||||| ||||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 3054429 ccgcaatatttagcttttgacgaagctttctcctcacacagcaagtgtaacaacagcagg 3054370

                                                       
Query: 207     acaatatgagggagtacgccataatatcattgcaggcttc 246
               | ||||| ||||| || ||||||||||||||||| |||||
Sbjct: 3054369 ataatatcagggaatatgccataatatcattgcatgcttc 3054330



 Score =  117 bits (59), Expect = 4e-23
 Identities = 71/75 (94%)
 Strand = Plus / Minus

                                                                           
Query: 62      ccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatcacatgt 121
               ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 3054897 ccacgaatctcaacttcccgccattcttgaacaagcgcacagcaacaacacatcaaatgt 3054838

                              
Query: 122     gaaaggaaatcatca 136
               || ||||||||||||
Sbjct: 3054837 gataggaaatcatca 3054823



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                           
Query: 326     acacagagctggctctgaacagcaaccaagtaaatctgcatgccactcatcactgtatga 385
               ||||| || ||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 3053166 acacaaagatggctctgaacagcaaccaagcaaatctgcatgccactcgtcgctgtatga 3053107

                                    
Query: 386     tgctgtactcgagaccagatc 406
               | || | || |||||||||||
Sbjct: 3053106 tcctctgcttgagaccagatc 3053086



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                        
Query: 448     aggcatctttttgcttctttggagagtcatcatcatacgattttgcactgtcttcac 504
               ||||||| ||||||||||||||||||||||||| ||| | ||||||||| |||||||
Sbjct: 3052708 aggcatccttttgcttctttggagagtcatcatgatatgtttttgcactatcttcac 3052652



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                
Query: 255     acatgggcttgtttttggcgattgaagcaatccttgagaatgttccaca 303
               |||||||| |||| || || |||||||||||| ||||||||||||||||
Sbjct: 3053952 acatgggcctgttcttcgcaattgaagcaatctttgagaatgttccaca 3053904
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>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0011L14, complete sequence
          Length = 117974

 Score =  119 bits (60), Expect = 9e-24
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                         
Query: 147   ccgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaacaag 206
             |||||||||||||| ||||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 41832 ccgcaatatttagcttttgacgaagctttctcctcacacagcaagtgtaacaacagcagg 41891

                                                     
Query: 207   acaatatgagggagtacgccataatatcattgcaggcttc 246
             | ||||| ||||| || ||||||||||||||||| |||||
Sbjct: 41892 ataatatcagggaatatgccataatatcattgcatgcttc 41931



 Score =  117 bits (59), Expect = 4e-23
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                         
Query: 62    ccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatcacatgt 121
             ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 41364 ccacgaatctcaacttcccgccattcttgaacaagcgcacagcaacaacacatcaaatgt 41423

                            
Query: 122   gaaaggaaatcatca 136
             || ||||||||||||
Sbjct: 41424 gataggaaatcatca 41438



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                         
Query: 326   acacagagctggctctgaacagcaaccaagtaaatctgcatgccactcatcactgtatga 385
             ||||| || ||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 43095 acacaaagatggctctgaacagcaaccaagcaaatctgcatgccactcgtcgctgtatga 43154

                                  
Query: 386   tgctgtactcgagaccagatc 406
             | || | || |||||||||||
Sbjct: 43155 tcctctgcttgagaccagatc 43175



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                      
Query: 448   aggcatctttttgcttctttggagagtcatcatcatacgattttgcactgtcttcac 504
             ||||||| ||||||||||||||||||||||||| ||| | ||||||||| |||||||
Sbjct: 43553 aggcatccttttgcttctttggagagtcatcatgatatgtttttgcactatcttcac 43609



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 255   acatgggcttgtttttggcgattgaagcaatccttgagaatgttccaca 303
             |||||||| |||| || || |||||||||||| ||||||||||||||||
Sbjct: 42309 acatgggcctgttcttcgcaattgaagcaatctttgagaatgttccaca 42357
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  119 bits (60), Expect = 9e-24
 Identities = 90/100 (90%)
 Strand = Plus / Minus

                                                                           
Query: 147     ccgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaacaag 206
               |||||||||||||| ||||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 3054540 ccgcaatatttagcttttgacgaagctttctcctcacacagcaagtgtaacaacagcagg 3054481

                                                       
Query: 207     acaatatgagggagtacgccataatatcattgcaggcttc 246
               | ||||| ||||| || ||||||||||||||||| |||||
Sbjct: 3054480 ataatatcagggaatatgccataatatcattgcatgcttc 3054441



 Score =  117 bits (59), Expect = 4e-23
 Identities = 71/75 (94%)
 Strand = Plus / Minus

                                                                           
Query: 62      ccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatcacatgt 121
               ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 3055008 ccacgaatctcaacttcccgccattcttgaacaagcgcacagcaacaacacatcaaatgt 3054949

                              
Query: 122     gaaaggaaatcatca 136
               || ||||||||||||
Sbjct: 3054948 gataggaaatcatca 3054934



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                           
Query: 326     acacagagctggctctgaacagcaaccaagtaaatctgcatgccactcatcactgtatga 385
               ||||| || ||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 3053277 acacaaagatggctctgaacagcaaccaagcaaatctgcatgccactcgtcgctgtatga 3053218

                                    
Query: 386     tgctgtactcgagaccagatc 406
               | || | || |||||||||||
Sbjct: 3053217 tcctctgcttgagaccagatc 3053197



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                        
Query: 448     aggcatctttttgcttctttggagagtcatcatcatacgattttgcactgtcttcac 504
               ||||||| ||||||||||||||||||||||||| ||| | ||||||||| |||||||
Sbjct: 3052819 aggcatccttttgcttctttggagagtcatcatgatatgtttttgcactatcttcac 3052763



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                
Query: 255     acatgggcttgtttttggcgattgaagcaatccttgagaatgttccaca 303
               |||||||| |||| || || |||||||||||| ||||||||||||||||
Sbjct: 3054063 acatgggcctgttcttcgcaattgaagcaatctttgagaatgttccaca 3054015
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>ref|XM_470247.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3609

 Score =  117 bits (59), Expect = 4e-23
 Identities = 71/75 (94%)
 Strand = Plus / Minus

                                                                       
Query: 62  ccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatcacatgt 121
           ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 983 ccacgaatctcaacttcccgccattcttgaacaagcgcacagcaacaacacatcaaatgt 924

                          
Query: 122 gaaaggaaatcatca 136
           || ||||||||||||
Sbjct: 923 gataggaaatcatca 909



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 448 aggcatctttttgcttctttggagagtcatcatcatacgattttgcactgtcttcac 504
           ||||||| ||||||||||||||||||||||||| ||| | ||||||||| |||||||
Sbjct: 814 aggcatccttttgcttctttggagagtcatcatgatatgtttttgcactatcttcac 758



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 256 catgggcttgtttttggcgattgaagcaatccttgagaatgttccaca 303
           ||||||| |||| || || |||||||||||| ||||||||||||||||
Sbjct: 898 catgggcctgttcttcgcaattgaagcaatctttgagaatgttccaca 851
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 148      cgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaaca 204
                ||||||||||||| |||||| ||| ||||||   | |||||||||||||||||||||
Sbjct: 12108175 cgcaatatttagcttttgacaaagttttctcacgatacagcaagtgtaacagcaaca 12108231
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 148      cgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaaca 204
                ||||||||||||| |||||| ||| ||||||   | |||||||||||||||||||||
Sbjct: 12062545 cgcaatatttagcttttgacaaagttttctcacgatacagcaagtgtaacagcaaca 12062601
to top
>emb|AL732641.5|CNS08C9G Oryza sativa chromosome 12, . BAC OSJNBb0049G07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 92432

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 148   cgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaaca 204
             ||||||||||||| |||||| ||| ||||||   | |||||||||||||||||||||
Sbjct: 39632 cgcaatatttagcttttgacaaagttttctcacgatacagcaagtgtaacagcaaca 39576
to top
>ref|NM_179172.2| Arabidopsis thaliana unknown protein AT4G35920 transcript variant
            AT4G35920.2 mRNA, complete cds
          Length = 1829

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 56   tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 115
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1561 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1502

                 
Query: 116  acatg 120
            |||||
Sbjct: 1501 acatg 1497
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>ref|NM_119759.2| Arabidopsis thaliana unknown protein AT4G35920 transcript variant
            AT4G35920.1 mRNA, complete cds
          Length = 1898

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 56   tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 115
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1630 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1571

                 
Query: 116  acatg 120
            |||||
Sbjct: 1570 acatg 1566
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>ref|NM_179173.3| Arabidopsis thaliana unknown protein AT4G35920 transcript variant
            AT4G35920.3 mRNA, complete cds
          Length = 1880

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 56   tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 115
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1507 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1448

                 
Query: 116  acatg 120
            |||||
Sbjct: 1447 acatg 1443
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>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84
          Length = 195452

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 56    tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 115
             ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 84002 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 84061

                  
Query: 116   acatg 120
             |||||
Sbjct: 84062 acatg 84066
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>emb|AL022373.1|ATT19K4 Arabidopsis thaliana DNA chromosome 4, BAC clone T19K4 (ESSAII project)
          Length = 106007

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 56    tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 115
             ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 18733 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 18792

                  
Query: 116   acatg 120
             |||||
Sbjct: 18793 acatg 18797
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>gb|AY136293.1| Arabidopsis thaliana putative protein (At4g35920) mRNA, complete cds
          Length = 1873

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 56   tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 115
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1619 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1560

                 
Query: 116  acatg 120
            |||||
Sbjct: 1559 acatg 1555
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>gb|AY133604.1| Arabidopsis thaliana AT4g35920/F4B14_190 mRNA, complete cds
          Length = 1323

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 56   tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 115
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1211 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1152

                 
Query: 116  acatg 120
            |||||
Sbjct: 1151 acatg 1147
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>gb|AF367322.1| Arabidopsis thaliana AT4g35920/F4B14_190 mRNA, complete cds
          Length = 1865

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 56   tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 115
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1629 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1570

                 
Query: 116  acatg 120
            |||||
Sbjct: 1569 acatg 1565
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>emb|BX826751.1|CNS0A435 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB60ZB06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1824

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 56   tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 115
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1449 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1390

                 
Query: 116  acatg 120
            |||||
Sbjct: 1389 acatg 1385
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>gb|BT003430.1| Arabidopsis thaliana putative protein (At4g35920) mRNA, complete cds
          Length = 1381

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 56   tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 115
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1211 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1152

                 
Query: 116  acatg 120
            |||||
Sbjct: 1151 acatg 1147
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>emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BAC clone F4B14 (ESSA project)
          Length = 99461

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 56    tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 115
             ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 75806 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 75865

                  
Query: 116   acatg 120
             |||||
Sbjct: 75866 acatg 75870
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 217      ggagtacgccataatatcattgcaggcttct 247
                |||||| ||||||||||||||||| ||||||
Sbjct: 10842112 ggagtatgccataatatcattgcatgcttct 10842082
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>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 217   ggagtacgccataatatcattgcaggcttct 247
             |||||| ||||||||||||||||| ||||||
Sbjct: 65835 ggagtatgccataatatcattgcatgcttct 65805
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>gb|AC146008.3| Pan troglodytes BAC clone RP43-13N15 from 7, complete sequence
          Length = 151195

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 284    atccttgagaatgttccacatg 305
              ||||||||||||||||||||||
Sbjct: 122184 atccttgagaatgttccacatg 122163
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>gb|AC004852.2| Homo sapiens PAC clone RP4-668E10 from 7, complete sequence
          Length = 158541

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 284    atccttgagaatgttccacatg 305
              ||||||||||||||||||||||
Sbjct: 129125 atccttgagaatgttccacatg 129146
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>gb|AC146009.3| Pan troglodytes BAC clone RP43-13O12 from chromosome 7, complete sequence
          Length = 169801

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 284    atccttgagaatgttccacatg 305
              ||||||||||||||||||||||
Sbjct: 112034 atccttgagaatgttccacatg 112013
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>emb|BX548066.3| Zebrafish DNA sequence from clone CH211-226F1 in linkage group 20,
             complete sequence
          Length = 185926

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 478   catcatacgattttgcactgtcttca 503
             ||||||||||||||||||||| ||||
Sbjct: 93270 catcatacgattttgcactgttttca 93295
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>gb|AC164177.6| Mus musculus 10 BAC RP23-102O12 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 196230

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 121   tgaaaggaaatcatcacagcaccct 145
             ||||||||||| |||||||||||||
Sbjct: 57275 tgaaaggaaatgatcacagcaccct 57251
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>gb|AC159133.2| Pan troglodytes BAC clone CH251-51M20 from chromosome unknown, complete
              sequence
          Length = 149808

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 360    tctgcatgccactcatcactg 380
              |||||||||||||||||||||
Sbjct: 106977 tctgcatgccactcatcactg 106957
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>gb|AC022431.6| Homo sapiens chromosome 5 clone CTD-2583B1, complete sequence
          Length = 173698

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 360   tctgcatgccactcatcactg 380
             |||||||||||||||||||||
Sbjct: 70568 tctgcatgccactcatcactg 70548
to top
>gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 209599

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 121    tgaaaggaaatcatcacagcaccct 145
              ||||||||||| |||||||||||||
Sbjct: 204800 tgaaaggaaatgatcacagcaccct 204776
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 150      caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 198
                ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 10973097 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 10973145
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 150      caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 198
                ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 18025748 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 18025796
to top
>gb|AC157484.2| Pan troglodytes BAC clone CH251-301F2 from chromosome unknown, complete
              sequence
          Length = 182330

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 360    tctgcatgccactcatcactg 380
              |||||||||||||||||||||
Sbjct: 177340 tctgcatgccactcatcactg 177320
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>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0054L14
          Length = 150022

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 150   caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 198
             ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 52989 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 53037
to top
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0504D03
          Length = 139201

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 150  caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 198
            ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 2189 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 2237
to top
>dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0091I19
          Length = 126544

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 150   caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 198
             ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 35040 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 35088
to top
>dbj|AK102912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113K17, full
           insert sequence
          Length = 3073

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 150 caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 198
           ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 707 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 659
to top
>gb|AC125071.3| Mus musculus BAC clone RP23-453O8 from chromosome 12, complete
            sequence
          Length = 168279

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  gtcttcagacacagagctgg 337
            ||||||||||||||||||||
Sbjct: 9376 gtcttcagacacagagctgg 9357
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>emb|CR974458.2| Pig DNA sequence from clone CH242-29M17 on chromosome 17, complete
             sequence
          Length = 177939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   caatccttgagaatgttcca 301
             ||||||||||||||||||||
Sbjct: 70894 caatccttgagaatgttcca 70875
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>emb|AL356295.9| Human DNA sequence from clone RP11-768P11 on chromosome 13, complete
             sequence
          Length = 134347

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   aaatctgcatgccactcatc 376
             ||||||||||||||||||||
Sbjct: 41228 aaatctgcatgccactcatc 41247
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>emb|AL109804.41|HS1009E24 Human DNA sequence from clone RP5-1009E24 on chromosome 20 Contains the
             5' end of the ADAM33 gene for a disintegrin and
             metalloproteinase domain 33 protein, the SN gene encoding
             sialoadhesin, the C20orf60 gene, the C20orf27 gene, the
             C20orf28 gene, the CENPB gene for centromere protein B,
             the CDC25B gene for cell division cycle protein 25B, the
             C20orf29 gene, the 5' end of the gene for a novel protein
             (KIAA1271) and nine CpG islands, complete sequence
          Length = 185820

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   cagacacagagctggctctg 342
             ||||||||||||||||||||
Sbjct: 61111 cagacacagagctggctctg 61092
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>gb|AC124909.3| Equus caballus clone CH241-91H15, complete sequence
          Length = 171421

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   caatccttgagaatgttcca 301
             ||||||||||||||||||||
Sbjct: 62347 caatccttgagaatgttcca 62366
to top
>emb|X64346.1|HSGEND Saimiriine herpesvirus 2 complete genome
          Length = 112930

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   agcaagtgtaacagcaacaa 205
             ||||||||||||||||||||
Sbjct: 78127 agcaagtgtaacagcaacaa 78146
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>emb|BX294144.1| Pirellula sp. strain 1 complete genome; segment 12/24
          Length = 304850

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 234    cattgcaggcttctcccgaagaca 257
              |||||||| |||||||||||||||
Sbjct: 175474 cattgcagacttctcccgaagaca 175497
to top
>emb|AJ410493.1|SHE410493 Saimiriine herpesvirus 2 complete L-DNA sequence, strain C488
          Length = 113027

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   agcaagtgtaacagcaacaa 205
             ||||||||||||||||||||
Sbjct: 77954 agcaagtgtaacagcaacaa 77973
to top
>gb|AC116335.2| Homo sapiens chromosome 5 clone CTD-2297M2, complete sequence
          Length = 88370

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   atccttgagaatgttccaca 303
             ||||||||||||||||||||
Sbjct: 21661 atccttgagaatgttccaca 21680
to top
>dbj|AK134097.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830435M17 product:hypothetical protein,
            full insert sequence
          Length = 3276

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  gtcttcagacacagagctgg 337
            ||||||||||||||||||||
Sbjct: 2535 gtcttcagacacagagctgg 2516
to top
>gb|DP000030.1| Sus scrofa target 116 genomic scaffold
          Length = 380805

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    caatccttgagaatgttcca 301
              ||||||||||||||||||||
Sbjct: 277950 caatccttgagaatgttcca 277931
to top
>dbj|AP006436.1| Sus scrofa CC chemokine receptor genes(CCR3, CCR1, CCXCR1, FYCO1),
             complete and partial cds, clone: 0659A02
          Length = 167298

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   caatccttgagaatgttcca 301
             ||||||||||||||||||||
Sbjct: 44044 caatccttgagaatgttcca 44025
to top
>gb|AC019067.9| Homo sapiens BAC clone RP11-171B14 from 2, complete sequence
          Length = 169928

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   agctttctccttacacagca 189
             ||||||||||||||||||||
Sbjct: 42385 agctttctccttacacagca 42404
to top
>gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, complete sequence
          Length = 202863

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   agacacagagctggctctga 343
             ||||||||||||||||||||
Sbjct: 61369 agacacagagctggctctga 61350
to top
>gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 map 7, complete sequence
          Length = 199260

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    agacacagagctggctctga 343
              ||||||||||||||||||||
Sbjct: 150747 agacacagagctggctctga 150766
to top
>emb|AJ131939.1|SHE131939 Herpesvirus saimiri SHV2 C488 ORF56 (partial) and ORF57 promoter
          Length = 1729

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  agcaagtgtaacagcaacaa 205
            ||||||||||||||||||||
Sbjct: 1568 agcaagtgtaacagcaacaa 1587
to top
>gb|AC150802.3| Equus caballus clone CH241-121C14, complete sequence
          Length = 57311

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   caatccttgagaatgttcca 301
             ||||||||||||||||||||
Sbjct: 54231 caatccttgagaatgttcca 54212
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>gb|AC163707.3| Gallus gallus BAC clone CH261-71N11 from chromosome ul, complete sequence
          Length = 174599

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 111    acatcacatgtgaaaggaaatcat 134
              |||| |||||||||||||||||||
Sbjct: 118611 acatgacatgtgaaaggaaatcat 118634
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>gb|AC159649.3| Mus musculus BAC clone RP23-46D6 from chromosome 12, complete sequence
          Length = 198777

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   gtcttcagacacagagctgg 337
             ||||||||||||||||||||
Sbjct: 36486 gtcttcagacacagagctgg 36505
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>gb|CP000190.1| Drosophila melanogaster genomic scaffold 211000022280673
          Length = 72576

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    gggttatctttgtcttccct 52
             ||||||||||||||||||||
Sbjct: 24868 gggttatctttgtcttccct 24887
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>gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, complete sequence
          Length = 182926

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   aggtcttcagacacagagct 335
             ||||||||||||||||||||
Sbjct: 41188 aggtcttcagacacagagct 41169
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>gb|AC093241.4| Homo sapiens chromosome 5 clone RP11-104B22, complete sequence
          Length = 56726

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   atccttgagaatgttccaca 303
             ||||||||||||||||||||
Sbjct: 53124 atccttgagaatgttccaca 53143
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>gb|U60494.1|NTU60494 Nicotiana tabacum actin (Tob104) gene, partial cds
          Length = 1317

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 caacataggcatctttttgc 461
           ||||||||||||||||||||
Sbjct: 218 caacataggcatctttttgc 199
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 282     caatccttgagaatgttcca 301
               ||||||||||||||||||||
Sbjct: 1234865 caatccttgagaatgttcca 1234846



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 282     caatccttgagaatgttcca 301
               ||||||||||||||||||||
Sbjct: 1075815 caatccttgagaatgttcca 1075834
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>gb|M21943.1|HSV52K Hepesvirus saimiri 52 kDa immediate-early phosphoprotein gene,
           complete cds
          Length = 2220

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 agcaagtgtaacagcaacaa 205
           ||||||||||||||||||||
Sbjct: 555 agcaagtgtaacagcaacaa 574
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>gb|M86409.1|HSV3PRGEN Herpesvirus saimiri the most three prime end of the genome
          Length = 43658

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  agcaagtgtaacagcaacaa 205
            ||||||||||||||||||||
Sbjct: 8820 agcaagtgtaacagcaacaa 8839


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,356,278
Number of Sequences: 3902068
Number of extensions: 4356278
Number of successful extensions: 78526
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78265
Number of HSP's gapped (non-prelim): 260
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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