ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25d20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U08135.1|HVU08135 Hordeum vulgare photosystem-I PSI-F subunit... 1007 0.0
2ref|NM_184976.1| Oryza sativa (japonica cultivar-group), mRNA 468 e-128
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 468 e-128
4gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno... 468 e-128
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 468 e-128
6dbj|AK069791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
7dbj|AK060493.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
8dbj|AK059890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
9gb|AF093634.1|AF093634 Oryza sativa photosystem-1 F subunit prec... 468 e-128
10gb|AY103687.1| Zea mays PCO106710 mRNA sequence 460 e-126
11gb|AF139468.2|AF139468 Vigna radiata photosystem I reaction cent... 107 4e-20
12dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 66 1e-07
13gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 66 1e-07
14emb|BX814457.1|CNS0ADUS Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
15ref|NM_102871.3| Arabidopsis thaliana unknown protein AT1G31330 ... 56 1e-04
16gb|BT000680.1| Arabidopsis thaliana clone RAFL05-09-F03 (R10152)... 56 1e-04
17gb|AY051021.1| Arabidopsis thaliana putative photosystem I subun... 56 1e-04
18gb|AF360251.1| Arabidopsis thaliana putative photosystem I subun... 56 1e-04
19gb|AY094015.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, com... 56 1e-04
20gb|AY062712.1| Arabidopsis thaliana similar to photosystem I rea... 56 1e-04
21gb|AF424564.1|AF424564 Arabidopsis thaliana At1g31330/T19E23_1 m... 56 1e-04
22gb|AY052281.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, com... 56 1e-04
23gb|AY048220.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, com... 56 1e-04
24emb|BX818241.1|CNS0AEDF Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
25emb|BX814304.1|CNS0AEI0 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
26emb|BX815295.1|CNS0ACV1 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
27emb|BX814897.1|CNS0ACW2 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
28gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana... 56 1e-04
29gb|BT002099.1| Arabidopsis thaliana similar to photosystem I rea... 56 1e-04
30emb|X63765.1|SSPPSAFJ9 Synechococcus sp. genes psaF, psaJ and rp... 52 0.002
31gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 52 0.002
32dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 52 0.002
33emb|AJ245629.1|ATH245629 Arabidopsis thaliana mRNA for photosyst... 48 0.032
34gb|AY088009.1| Arabidopsis thaliana clone 40329 mRNA, complete s... 48 0.032
35gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 46 0.13
36dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 46 0.13
37ref|NM_197599.1| Oryza sativa (japonica cultivar-group) mucin-li... 44 0.50
38emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; s... 44 0.50
39emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; s... 44 0.50
40gb|BT023413.1| Arabidopsis thaliana At2g47890 gene, complete cds 44 0.50
41dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.50
42dbj|AK106264.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.50
43gb|M83119.1|FTRPHOTOI Flaveria trinervia photosystem I subunit I... 44 0.50
44gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 2.0
45gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 2.0
46gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 42 2.0
47gb|BT013202.1| Lycopersicon esculentum clone 134366R, mRNA sequence 42 2.0
48emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 2.0
49emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome... 42 2.0
50gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 geno... 42 2.0
51dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
52dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
53gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 42 2.0
54gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
55emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4,... 42 2.0
56ref|XM_471550.1| Oryza sativa (japonica cultivar-group), predic... 40 7.8
57ref|NM_197655.1| Oryza sativa (japonica cultivar-group) hypothet... 40 7.8
58gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's H... 40 7.8
59gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 7.8
60gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 7.8
61emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 7.8
62gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 7.8
63emb|AL445928.8| Human DNA sequence from clone RP11-305E17 on chr... 40 7.8
64emb|X13495.1|CRPSAF C.reinhardtii mRNA for 17 kd P21 protein of ... 40 7.8
65emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.8
66emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 40 7.8
67emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 40 7.8
68emb|BX640411.1| Bordetella pertussis strain Tohama I, complete g... 40 7.8
69emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen... 40 7.8
70emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 40 7.8
71emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4,... 40 7.8
72gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
73gb|AE012083.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.8
74ref|NM_169641.2| Drosophila melanogaster Tropomyosin 1 CG4898-RI... 40 7.8
75ref|NM_169640.1| Drosophila melanogaster Tropomyosin 1 CG4898-RC... 40 7.8
76ref|NM_169639.2| Drosophila melanogaster Tropomyosin 1 CG4898-RH... 40 7.8
77gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, co... 40 7.8
78gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 geno... 40 7.8
79gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, co... 40 7.8
80gb|AY084208.1| Drosophila melanogaster SD07763 full insert cDNA 40 7.8
81gb|AY060262.1| Drosophila melanogaster GH09289 full length cDNA 40 7.8
82gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 7.8
83gb|CP000249.1| Frankia sp. CcI3, complete genome 40 7.8
84gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.8
85emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 i... 40 7.8
86dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
87gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, r... 40 7.8
88dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 7.8
89gb|AF135791.1|AF135791 Chlamydomonas reinhardtii photosystem I s... 40 7.8
90gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46... 40 7.8
91gb|BT001902.1| Drosophila melanogaster SD21996 full insert cDNA 40 7.8
92emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 7.8
93gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 7.8
94dbj|AB209672.1| Homo sapiens mRNA for Transducin-like enhancer o... 40 7.8
95gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8 
>gb|U08135.1|HVU08135 Hordeum vulgare photosystem-I PSI-F subunit precursor mRNA,
           complete cds
          Length = 990

 Score = 1007 bits (508), Expect = 0.0
 Identities = 521/524 (99%), Gaps = 1/524 (0%)
 Strand = Plus / Minus

                                                                       
Query: 15  aaatacacacgtgtgaagagagaacacaatagttatacaagattgggtt-agtttcttaa 73
           |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 955 aaatacacacatgtgaagagagaacacaatagttatacaagattgggttcagtttcttaa 896

                                                                       
Query: 74  atacaagagaggttccatttctccatgatcctatcagctcctacaccaagcccacacaga 133
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 atacaagagaggttccatttctccatgatcctatcagctcctacaccaagcccacacaga 836

                                                                       
Query: 134 tcgacaccacaagccctcatcctccgctgcccatctgacttgggaccgactagccaacca 193
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 tcgacaccacaagccctcatcctccgctgcccatctgacttgggaccgactagccaacca 776

                                                                       
Query: 194 cgcacgcatggcagctagttagtagccgatgtcggcgtcgtcgacgacgaggtcgccgtt 253
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 cgcacgcatggcagctacttagtagccgatgtcggcgtcgtcgacgacgaggtcgccgtt 716

                                                                       
Query: 254 gatgagctcgcggtatgcggcgacgggccagatgaagcccctggggatgatcctggcggc 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gatgagctcgcggtatgcggcgacgggccagatgaagcccctggggatgatcctggcggc 656

                                                                       
Query: 314 gagctcgacgtcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgat 373
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gagctcgacgtcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgat 596

                                                                       
Query: 374 gaggtagctgcgtccgacccagccgatccagccggcgatgtagaggaagagcacgccggg 433
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaggtagctgcgtccgacccagccgatccagccggcgatgtagaggaagagcacgccggg 536

                                                                       
Query: 434 ggtgatgaactcgccccagtgccgctggtcgccgctgacgatgaggtggggcaggccgtc 493
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ggtgatgaactcgccccagtgccgctggtcgccgctgacgatgaggtggggcaggccgtc 476

                                                       
Query: 494 ggagccgcagagcaggccgaacttgccgtagttctcgaaccggc 537
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggagccgcagagcaggccgaacttgccgtagttctcgaaccggc 432
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>ref|NM_184976.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score =  468 bits (236), Expect = e-128
 Identities = 302/324 (93%)
 Strand = Plus / Minus

                                                                       
Query: 214 agtagccgatgtcggcgtcgtcgacgacgaggtcgccgttgatgagctcgcggtatgcgg 273
           ||||||||||||| ||||||||||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 778 agtagccgatgtcagcgtcgtcgacgacgaggttgccggtgatgagctcacggtaggcgg 719

                                                                       
Query: 274 cgacgggccagatgaagcccctggggatgatcctggcggcgagctcgacgtcgatgatga 333
           |||||||||||||||| ||||| |||| || | || ||||||||||||||||||||||||
Sbjct: 718 cgacgggccagatgaaccccctcgggaggagcttgacggcgagctcgacgtcgatgatga 659

                                                                       
Query: 334 tctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctgcgtccgaccc 393
           ||||||||||||| ||||||||||||||||||| ||||||||||||||| |  |||||||
Sbjct: 658 tctccctcatggccggcttcttctcgccgctgatggcgatgaggtagctcctgccgaccc 599

                                                                       
Query: 394 agccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactcgccccagt 453
           ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 598 agccgatccagccggcgatgtagaggaagagcaagcccggggtgatgaactcgccccagt 539

                                                                       
Query: 454 gccgctggtcgccgctgacgatgaggtggggcaggccgtcggagccgcagagcaggccga 513
           |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct: 538 gccgctggtcgccgctgacgatgaggtgcgggaggccgtcggcgccgcagagcaggccga 479

                                   
Query: 514 acttgccgtagttctcgaaccggc 537
           ||||||||||||||||||| ||||
Sbjct: 478 acttgccgtagttctcgaagcggc 455



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 66  tttcttaaatacaagagaggttccatttctccatgatcctatcagctcctacacc 120
           |||||||| ||||| |||  ||||||| ||||||||||||||||||| |||||||
Sbjct: 921 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 867
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  468 bits (236), Expect = e-128
 Identities = 302/324 (93%)
 Strand = Plus / Plus

                                                                            
Query: 214      agtagccgatgtcggcgtcgtcgacgacgaggtcgccgttgatgagctcgcggtatgcgg 273
                ||||||||||||| ||||||||||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 31969474 agtagccgatgtcagcgtcgtcgacgacgaggttgccggtgatgagctcacggtaggcgg 31969533

                                                                            
Query: 274      cgacgggccagatgaagcccctggggatgatcctggcggcgagctcgacgtcgatgatga 333
                |||||||||||||||| ||||| |||| || | || ||||||||||||||||||||||||
Sbjct: 31969534 cgacgggccagatgaaccccctcgggaggagcttgacggcgagctcgacgtcgatgatga 31969593

                                                                            
Query: 334      tctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctgcgtccgaccc 393
                ||||||||||||| ||||||||||||||||||| ||||||||||||||| |  |||||||
Sbjct: 31969594 tctccctcatggccggcttcttctcgccgctgatggcgatgaggtagctcctgccgaccc 31969653

                                                                            
Query: 394      agccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactcgccccagt 453
                ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 31969654 agccgatccagccggcgatgtagaggaagagcaagcccggggtgatgaactcgccccagt 31969713

                                                                            
Query: 454      gccgctggtcgccgctgacgatgaggtggggcaggccgtcggagccgcagagcaggccga 513
                |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct: 31969714 gccgctggtcgccgctgacgatgaggtgcgggaggccgtcggcgccgcagagcaggccga 31969773

                                        
Query: 514      acttgccgtagttctcgaaccggc 537
                ||||||||||||||||||| ||||
Sbjct: 31969774 acttgccgtagttctcgaagcggc 31969797



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 66       tttcttaaatacaagagaggttccatttctccatgatcctatcagctcctacacc 120
                |||||||| ||||| |||  ||||||| ||||||||||||||||||| |||||||
Sbjct: 31969219 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 31969273
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>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
             sequence
          Length = 144306

 Score =  468 bits (236), Expect = e-128
 Identities = 302/324 (93%)
 Strand = Plus / Plus

                                                                         
Query: 214   agtagccgatgtcggcgtcgtcgacgacgaggtcgccgttgatgagctcgcggtatgcgg 273
             ||||||||||||| ||||||||||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 61426 agtagccgatgtcagcgtcgtcgacgacgaggttgccggtgatgagctcacggtaggcgg 61485

                                                                         
Query: 274   cgacgggccagatgaagcccctggggatgatcctggcggcgagctcgacgtcgatgatga 333
             |||||||||||||||| ||||| |||| || | || ||||||||||||||||||||||||
Sbjct: 61486 cgacgggccagatgaaccccctcgggaggagcttgacggcgagctcgacgtcgatgatga 61545

                                                                         
Query: 334   tctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctgcgtccgaccc 393
             ||||||||||||| ||||||||||||||||||| ||||||||||||||| |  |||||||
Sbjct: 61546 tctccctcatggccggcttcttctcgccgctgatggcgatgaggtagctcctgccgaccc 61605

                                                                         
Query: 394   agccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactcgccccagt 453
             ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 61606 agccgatccagccggcgatgtagaggaagagcaagcccggggtgatgaactcgccccagt 61665

                                                                         
Query: 454   gccgctggtcgccgctgacgatgaggtggggcaggccgtcggagccgcagagcaggccga 513
             |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct: 61666 gccgctggtcgccgctgacgatgaggtgcgggaggccgtcggcgccgcagagcaggccga 61725

                                     
Query: 514   acttgccgtagttctcgaaccggc 537
             ||||||||||||||||||| ||||
Sbjct: 61726 acttgccgtagttctcgaagcggc 61749



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 66    tttcttaaatacaagagaggttccatttctccatgatcctatcagctcctacacc 120
             |||||||| ||||| |||  ||||||| ||||||||||||||||||| |||||||
Sbjct: 61171 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 61225
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  468 bits (236), Expect = e-128
 Identities = 302/324 (93%)
 Strand = Plus / Plus

                                                                            
Query: 214      agtagccgatgtcggcgtcgtcgacgacgaggtcgccgttgatgagctcgcggtatgcgg 273
                ||||||||||||| ||||||||||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 32059986 agtagccgatgtcagcgtcgtcgacgacgaggttgccggtgatgagctcacggtaggcgg 32060045

                                                                            
Query: 274      cgacgggccagatgaagcccctggggatgatcctggcggcgagctcgacgtcgatgatga 333
                |||||||||||||||| ||||| |||| || | || ||||||||||||||||||||||||
Sbjct: 32060046 cgacgggccagatgaaccccctcgggaggagcttgacggcgagctcgacgtcgatgatga 32060105

                                                                            
Query: 334      tctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctgcgtccgaccc 393
                ||||||||||||| ||||||||||||||||||| ||||||||||||||| |  |||||||
Sbjct: 32060106 tctccctcatggccggcttcttctcgccgctgatggcgatgaggtagctcctgccgaccc 32060165

                                                                            
Query: 394      agccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactcgccccagt 453
                ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 32060166 agccgatccagccggcgatgtagaggaagagcaagcccggggtgatgaactcgccccagt 32060225

                                                                            
Query: 454      gccgctggtcgccgctgacgatgaggtggggcaggccgtcggagccgcagagcaggccga 513
                |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct: 32060226 gccgctggtcgccgctgacgatgaggtgcgggaggccgtcggcgccgcagagcaggccga 32060285

                                        
Query: 514      acttgccgtagttctcgaaccggc 537
                ||||||||||||||||||| ||||
Sbjct: 32060286 acttgccgtagttctcgaagcggc 32060309



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 66       tttcttaaatacaagagaggttccatttctccatgatcctatcagctcctacacc 120
                |||||||| ||||| |||  ||||||| ||||||||||||||||||| |||||||
Sbjct: 32059731 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 32059785
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>dbj|AK069791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031N02, full
           insert sequence
          Length = 967

 Score =  468 bits (236), Expect = e-128
 Identities = 302/324 (93%)
 Strand = Plus / Minus

                                                                       
Query: 214 agtagccgatgtcggcgtcgtcgacgacgaggtcgccgttgatgagctcgcggtatgcgg 273
           ||||||||||||| ||||||||||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 742 agtagccgatgtcagcgtcgtcgacgacgaggttgccggtgatgagctcacggtaggcgg 683

                                                                       
Query: 274 cgacgggccagatgaagcccctggggatgatcctggcggcgagctcgacgtcgatgatga 333
           |||||||||||||||| ||||| |||| || | || ||||||||||||||||||||||||
Sbjct: 682 cgacgggccagatgaaccccctcgggaggagcttgacggcgagctcgacgtcgatgatga 623

                                                                       
Query: 334 tctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctgcgtccgaccc 393
           ||||||||||||| ||||||||||||||||||| ||||||||||||||| |  |||||||
Sbjct: 622 tctccctcatggccggcttcttctcgccgctgatggcgatgaggtagctcctgccgaccc 563

                                                                       
Query: 394 agccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactcgccccagt 453
           ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 562 agccgatccagccggcgatgtagaggaagagcaagcccggggtgatgaactcgccccagt 503

                                                                       
Query: 454 gccgctggtcgccgctgacgatgaggtggggcaggccgtcggagccgcagagcaggccga 513
           |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct: 502 gccgctggtcgccgctgacgatgaggtgcgggaggccgtcggcgccgcagagcaggccga 443

                                   
Query: 514 acttgccgtagttctcgaaccggc 537
           ||||||||||||||||||| ||||
Sbjct: 442 acttgccgtagttctcgaagcggc 419



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 66  tttcttaaatacaagagaggttccatttctccatgatcctatcagctcctacacc 120
           |||||||| ||||| |||  ||||||| ||||||||||||||||||| |||||||
Sbjct: 890 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 836
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>dbj|AK060493.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-D02, full
           insert sequence
          Length = 997

 Score =  468 bits (236), Expect = e-128
 Identities = 302/324 (93%)
 Strand = Plus / Minus

                                                                       
Query: 214 agtagccgatgtcggcgtcgtcgacgacgaggtcgccgttgatgagctcgcggtatgcgg 273
           ||||||||||||| ||||||||||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 777 agtagccgatgtcagcgtcgtcgacgacgaggttgccggtgatgagctcacggtaggcgg 718

                                                                       
Query: 274 cgacgggccagatgaagcccctggggatgatcctggcggcgagctcgacgtcgatgatga 333
           |||||||||||||||| ||||| |||| || | || ||||||||||||||||||||||||
Sbjct: 717 cgacgggccagatgaaccccctcgggaggagcttgacggcgagctcgacgtcgatgatga 658

                                                                       
Query: 334 tctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctgcgtccgaccc 393
           ||||||||||||| ||||||||||||||||||| ||||||||||||||| |  |||||||
Sbjct: 657 tctccctcatggccggcttcttctcgccgctgatggcgatgaggtagctcctgccgaccc 598

                                                                       
Query: 394 agccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactcgccccagt 453
           ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 597 agccgatccagccggcgatgtagaggaagagcaagcccggggtgatgaactcgccccagt 538

                                                                       
Query: 454 gccgctggtcgccgctgacgatgaggtggggcaggccgtcggagccgcagagcaggccga 513
           |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct: 537 gccgctggtcgccgctgacgatgaggtgcgggaggccgtcggcgccgcagagcaggccga 478

                                   
Query: 514 acttgccgtagttctcgaaccggc 537
           ||||||||||||||||||| ||||
Sbjct: 477 acttgccgtagttctcgaagcggc 454



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 66  tttcttaaatacaagagaggttccatttctccatgatcctatcagctcctacacc 120
           |||||||| ||||| |||  ||||||| ||||||||||||||||||| |||||||
Sbjct: 920 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 866
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>dbj|AK059890.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C12, full
           insert sequence
          Length = 990

 Score =  468 bits (236), Expect = e-128
 Identities = 302/324 (93%)
 Strand = Plus / Minus

                                                                       
Query: 214 agtagccgatgtcggcgtcgtcgacgacgaggtcgccgttgatgagctcgcggtatgcgg 273
           ||||||||||||| ||||||||||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 765 agtagccgatgtcagcgtcgtcgacgacgaggttgccggtgatgagctcacggtaggcgg 706

                                                                       
Query: 274 cgacgggccagatgaagcccctggggatgatcctggcggcgagctcgacgtcgatgatga 333
           |||||||||||||||| ||||| |||| || | || ||||||||||||||||||||||||
Sbjct: 705 cgacgggccagatgaaccccctcgggaggagcttgacggcgagctcgacgtcgatgatga 646

                                                                       
Query: 334 tctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctgcgtccgaccc 393
           ||||||||||||| ||||||||||||||||||| ||||||||||||||| |  |||||||
Sbjct: 645 tctccctcatggccggcttcttctcgccgctgatggcgatgaggtagctcctgccgaccc 586

                                                                       
Query: 394 agccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactcgccccagt 453
           ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 585 agccgatccagccggcgatgtagaggaagagcaagcccggggtgatgaactcgccccagt 526

                                                                       
Query: 454 gccgctggtcgccgctgacgatgaggtggggcaggccgtcggagccgcagagcaggccga 513
           |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct: 525 gccgctggtcgccgctgacgatgaggtgcgggaggccgtcggcgccgcagagcaggccga 466

                                   
Query: 514 acttgccgtagttctcgaaccggc 537
           ||||||||||||||||||| ||||
Sbjct: 465 acttgccgtagttctcgaagcggc 442



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 66  tttcttaaatacaagagaggttccatttctccatgatcctatcagctcctacacc 120
           |||||||| ||||| |||  ||||||| ||||||||||||||||||| |||||||
Sbjct: 913 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 859
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>gb|AF093634.1|AF093634 Oryza sativa photosystem-1 F subunit precursor (PSI-F) mRNA,
           complete cds
          Length = 996

 Score =  468 bits (236), Expect = e-128
 Identities = 302/324 (93%)
 Strand = Plus / Minus

                                                                       
Query: 214 agtagccgatgtcggcgtcgtcgacgacgaggtcgccgttgatgagctcgcggtatgcgg 273
           ||||||||||||| ||||||||||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 758 agtagccgatgtcagcgtcgtcgacgacgaggttgccggtgatgagctcacggtaggcgg 699

                                                                       
Query: 274 cgacgggccagatgaagcccctggggatgatcctggcggcgagctcgacgtcgatgatga 333
           |||||||||||||||| ||||| |||| || | || ||||||||||||||||||||||||
Sbjct: 698 cgacgggccagatgaaccccctcgggaggagcttgacggcgagctcgacgtcgatgatga 639

                                                                       
Query: 334 tctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctgcgtccgaccc 393
           ||||||||||||| ||||||||||||||||||| ||||||||||||||| |  |||||||
Sbjct: 638 tctccctcatggccggcttcttctcgccgctgatggcgatgaggtagctcctgccgaccc 579

                                                                       
Query: 394 agccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactcgccccagt 453
           ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 578 agccgatccagccggcgatgtagaggaagagcaagcccggggtgatgaactcgccccagt 519

                                                                       
Query: 454 gccgctggtcgccgctgacgatgaggtggggcaggccgtcggagccgcagagcaggccga 513
           |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct: 518 gccgctggtcgccgctgacgatgaggtgcgggaggccgtcggcgccgcagagcaggccga 459

                                   
Query: 514 acttgccgtagttctcgaaccggc 537
           ||||||||||||||||||| ||||
Sbjct: 458 acttgccgtagttctcgaagcggc 435



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 66  tttcttaaatacaagagaggttccatttctccatgatcctatcagctcctacacc 120
           |||||||| ||||| |||  ||||||| ||||||||||||||||||| |||||||
Sbjct: 901 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 847
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>gb|AY103687.1| Zea mays PCO106710 mRNA sequence
          Length = 1242

 Score =  460 bits (232), Expect = e-126
 Identities = 308/332 (92%), Gaps = 1/332 (0%)
 Strand = Plus / Minus

                                                                       
Query: 204 gcagctagttagtagccgatgtcggcgtcgtcgacgacgaggtcgccgttgatgagctcg 263
           ||||||||| |||||||||||||   |||||||||||||||||| |||||||||||||||
Sbjct: 802 gcagctagt-agtagccgatgtccttgtcgtcgacgacgaggtctccgttgatgagctcg 744

                                                                       
Query: 264 cggtatgcggcgacgggccagatgaagcccctggggatgatcctggcggcgagctcgacg 323
           ||||| || ||||||||||||||||| |||||||||| ||  | || |||||||||||||
Sbjct: 743 cggtaggccgcgacgggccagatgaaccccctggggaggaggcgggtggcgagctcgacg 684

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| 
Sbjct: 683 tcgatgatgatctccctcatggcgggcttcttctcgccgctgatggcgatgaggtagctc 624

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           |  |||||||| |||||||| |||||||||||||||||||||| ||| ||||||| ||||
Sbjct: 623 ctgccgacccacccgatccacccggcgatgtagaggaagagcaggcccggggtgacgaac 564

                                                                       
Query: 444 tcgccccagtgccgctggtcgccgctgacgatgaggtggggcaggccgtcggagccgcag 503
           |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 563 tcgccccagtgccgctggtcgccgctgacgatgaggtgcggcaggccgtcggcgccgcag 504

                                           
Query: 504 agcaggccgaacttgccgtagttctcgaaccg 535
           ||||||||||||||||||||||||||||||||
Sbjct: 503 agcaggccgaacttgccgtagttctcgaaccg 472
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>gb|AF139468.2|AF139468 Vigna radiata photosystem I reaction center subunit III (CipPsaF)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 885

 Score =  107 bits (54), Expect = 4e-20
 Identities = 150/182 (82%)
 Strand = Plus / Minus

                                                                       
Query: 321 acgtcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtag 380
           |||||||||||||||||| |||| |  || || |||||  | |||| ||| || ||||||
Sbjct: 651 acgtcgatgatgatctccttcatcgtcggttttttctcatccctgatggcaataaggtag 592

                                                                       
Query: 381 ctgcgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatg 440
           || || || ||||| |||||||| ||||||||||| ||||| || |  || || ||||||
Sbjct: 591 ctccgacccacccacccgatccacccggcgatgtacaggaataggaacccaggagtgatg 532

                                                                       
Query: 441 aactcgccccagtgccgctggtcgccgctgacgatgaggtggggcaggccgtcggagccg 500
           |||||||||||||||| |||||| ||||| ||||| ||||| || || ||||||| ||||
Sbjct: 531 aactcgccccagtgcctctggtccccgctcacgatcaggtgcggtagcccgtcggcgccg 472

             
Query: 501 ca 502
           ||
Sbjct: 471 ca 470
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                   
Query: 390    acccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaa 442
              |||||||| ||||||||||||||||||||||| |||| || |||| |||||||
Sbjct: 346836 acccagccaatccagccggcgatgtagaggaacagcaagctggggatgatgaa 346784
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                    
Query: 390     acccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaa 442
               |||||||| ||||||||||||||||||||||| |||| || |||| |||||||
Sbjct: 1273968 acccagccaatccagccggcgatgtagaggaacagcaagctggggatgatgaa 1274020
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>emb|BX814457.1|CNS0ADUS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB75ZA08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 411

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 113/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || |||| |||||| 
Sbjct: 212 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctatgaagtagctt 153

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 152 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 93

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 92  tctccccaatgccgctggtc 73
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>ref|NM_102871.3| Arabidopsis thaliana unknown protein AT1G31330 mRNA, complete cds
          Length = 925

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 638 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 579

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 578 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 519

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 518 tctccccaatgccgctggtc 499
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>gb|BT000680.1| Arabidopsis thaliana clone RAFL05-09-F03 (R10152) putative
           photosystem I reaction centre subunit III precursor
           (At1g31330) mRNA, complete cds
          Length = 859

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 610 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 551

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 550 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 491

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 490 tctccccaatgccgctggtc 471
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>gb|AY051021.1| Arabidopsis thaliana putative photosystem I subunit III precursor
           (At1g31330) mRNA, complete cds
          Length = 697

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 566 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 507

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 506 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 447

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 446 tctccccaatgccgctggtc 427
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>gb|AF360251.1| Arabidopsis thaliana putative photosystem I subunit III precursor
           (At1g31330) mRNA, complete cds
          Length = 821

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 610 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 551

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 550 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 491

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 490 tctccccaatgccgctggtc 471
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>gb|AY094015.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds
          Length = 666

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 566 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 507

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 506 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 447

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 446 tctccccaatgccgctggtc 427
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>gb|AY062712.1| Arabidopsis thaliana similar to photosystem I reaction centre
           subunit III precursor (At1g31330; T19E23.12) mRNA,
           complete cds
          Length = 805

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 610 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 551

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 550 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 491

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 490 tctccccaatgccgctggtc 471
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>gb|AF424564.1|AF424564 Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds
          Length = 859

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 610 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 551

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 550 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 491

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 490 tctccccaatgccgctggtc 471
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>gb|AY052281.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds
          Length = 1737

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                        
Query: 324  tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
            ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 1491 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 1432

                                                                        
Query: 384  cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
            | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 1431 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 1372

                                
Query: 444  tcgccccagtgccgctggtc 463
            || ||||| |||||||||||
Sbjct: 1371 tctccccaatgccgctggtc 1352
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>gb|AY048220.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds
          Length = 820

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 627 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 568

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 567 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 508

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 507 tctccccaatgccgctggtc 488
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>emb|BX818241.1|CNS0AEDF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL69ZD07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 776

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 577 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 518

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 517 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 458

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 457 tctccccaatgccgctggtc 438
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>emb|BX814304.1|CNS0AEI0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB67ZC10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 811

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 598 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 539

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 538 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 479

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 478 tctccccaatgccgctggtc 459
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>emb|BX815295.1|CNS0ACV1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS4ZF05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 817

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 619 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 560

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 559 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 500

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 499 tctccccaatgccgctggtc 480
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>emb|BX814897.1|CNS0ACW2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS17ZC11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 824

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 627 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 568

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 567 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 508

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 507 tctccccaatgccgctggtc 488
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>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I,
             complete sequence
          Length = 87618

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                         
Query: 324   tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
             ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 55603 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 55662

                                                                         
Query: 384   cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
             | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 55663 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 55722

                                 
Query: 444   tcgccccagtgccgctggtc 463
             || ||||| |||||||||||
Sbjct: 55723 tctccccaatgccgctggtc 55742
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>gb|BT002099.1| Arabidopsis thaliana similar to photosystem I reaction centre
           subunit III precursor (At1g31330) mRNA, complete cds
          Length = 699

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 566 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 507

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| |||||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 506 cttccaacccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 447

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 446 tctccccaatgccgctggtc 427
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>emb|X63765.1|SSPPSAFJ9 Synechococcus sp. genes psaF, psaJ and rp19 for photosystem I
           subunit III, subunit X and ribosomal protein RL9
          Length = 1592

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 390 acccagccgatccagccggcgatgtagaggaagagcac 427
           |||||||| |||||||| |||||||| |||||||||||
Sbjct: 512 acccagccaatccagccagcgatgtacaggaagagcac 475
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                        
Query: 391    cccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactcgcc 448
              ||||||| | ||||||||||||||||||||| |||| ||| ||| |||  ||||||||
Sbjct: 300301 cccagcccagccagccggcgatgtagaggaaaagcaggccagggatgagaaactcgcc 300358
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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                     
Query: 390     acccagccgatccagccggcgatgtagaggaagagcac 427
               |||||||| |||||||| |||||||| |||||||||||
Sbjct: 2524284 acccagccaatccagccagcgatgtacaggaagagcac 2524247
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>emb|AJ245629.1|ATH245629 Arabidopsis thaliana mRNA for photosystem I subunit III precursor
           (psaF gene)
          Length = 865

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 111/140 (79%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 634 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 575

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| || ||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 574 cttccaacccacccaatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 515

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 514 tctccccaatgccgctggtc 495
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>gb|AY088009.1| Arabidopsis thaliana clone 40329 mRNA, complete sequence
          Length = 803

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 111/140 (79%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgatgatgatctccctcatggcgggcttcttctcgccgctgacggcgatgaggtagctg 383
           ||||||||||||||  |||| ||||| |||||||| || || |  || || | |||||| 
Sbjct: 610 tcgatgatgatctctttcatcgcgggtttcttctcaccactaatagctattaagtagctt 551

                                                                       
Query: 384 cgtccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaac 443
           | ||| ||||| || ||||| || || ||||||||||| || |  || || || ||||||
Sbjct: 550 cttccaacccacccaatccatccagcaatgtagaggaaaagaatccctggagtaatgaac 491

                               
Query: 444 tcgccccagtgccgctggtc 463
           || ||||| |||||||||||
Sbjct: 490 tctccccaatgccgctggtc 471
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                          
Query: 391     cccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactcgccc 449
               ||||||| | ||| |||||||||||||| || |||| ||||||| |||  |||||||||
Sbjct: 2927256 cccagcccagccaaccggcgatgtagagaaaaagcaagccggggatgagaaactcgccc 2927198
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 390    acccagccgatccagccggcgatgtagaggaagag 424
              ||||| |||||||| ||||| ||||||||||||||
Sbjct: 111364 acccaaccgatccaaccggcaatgtagaggaagag 111398
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>ref|NM_197599.1| Oryza sativa (japonica cultivar-group) mucin-like protein
           (OSJNBb0015I11.17), mRNA
          Length = 1110

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 219 ccgatgtcggcgtcgtcgacgacgaggtcgccgt 252
           ||||||||||||||| ||||||| ||| ||||||
Sbjct: 386 ccgatgtcggcgtcggcgacgacaaggccgccgt 353
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>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2
          Length = 178073

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 218   gccgatgtcggcgtcgtcgacgacgaggtcgccg 251
             ||||||||| ||| ||||||||||||| ||||||
Sbjct: 38032 gccgatgtccgcgccgtcgacgacgagctcgccg 38065
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>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 218    gccgatgtcggcgtcgtcgacgacgaggtcgccg 251
              ||||||||| ||| ||||||||||||| ||||||
Sbjct: 127590 gccgatgtccgcgccgtcgacgacgagctcgccg 127557
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>gb|BT023413.1| Arabidopsis thaliana At2g47890 gene, complete cds
          Length = 1470

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                        
Query: 390  acccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactcgccc 449
            ||||| |||||||| || || ||||||||||| || |  || || || |||||||| |||
Sbjct: 1262 acccacccgatccatccagcaatgtagaggaaaagaatccctggagtaatgaactctccc 1321

                          
Query: 450  cagtgccgctggtc 463
            || |||||||||||
Sbjct: 1322 caatgccgctggtc 1335
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 224     gtcggcgtcgtcgacgacgagg 245
               ||||||||||||||||||||||
Sbjct: 1139192 gtcggcgtcgtcgacgacgagg 1139213
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>dbj|AK106264.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F10, full
           insert sequence
          Length = 1488

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 219 ccgatgtcggcgtcgtcgacgacgaggtcgccgt 252
           ||||||||||||||| ||||||| ||| ||||||
Sbjct: 62  ccgatgtcggcgtcggcgacgacaaggccgccgt 29
to top
>gb|M83119.1|FTRPHOTOI Flaveria trinervia photosystem I subunit III (psaF) gene, complete
           cds
          Length = 824

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 386 tccgacccagccgatccagccggcgatgtagaggaagagcacgccgggggtgatgaactc 445
           ||||||||| |||||||| || |||||||| || || || |  ||||||||||| || ||
Sbjct: 542 tccgacccacccgatccatccagcgatgtacagaaatagaatcccgggggtgataaattc 483

                 
Query: 446 gcccca 451
           ||||||
Sbjct: 482 gcccca 477
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 486     aggccgtcggagccgcagagcaggccgaa 514
               |||||||||| ||||| ||||||||||||
Sbjct: 1425635 aggccgtcggtgccgccgagcaggccgaa 1425663
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 418     ggaagagcacgccgggggtga 438
               |||||||||||||||||||||
Sbjct: 3154528 ggaagagcacgccgggggtga 3154508
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 226     cggcgtcgtcgacgacgaggt 246
               |||||||||||||||||||||
Sbjct: 1949449 cggcgtcgtcgacgacgaggt 1949429
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>gb|BT013202.1| Lycopersicon esculentum clone 134366R, mRNA sequence
          Length = 824

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 435 gtgatgaactcgccccagtgccgctggtc 463
           ||||||||||| |||||||||| ||||||
Sbjct: 501 gtgatgaactcaccccagtgcctctggtc 473
to top
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14
          Length = 307550

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 418    ggaagagcacgccgggggtga 438
              |||||||||||||||||||||
Sbjct: 299334 ggaagagcacgccgggggtga 299314
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>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13
          Length = 348676

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 418   ggaagagcacgccgggggtga 438
             |||||||||||||||||||||
Sbjct: 41281 ggaagagcacgccgggggtga 41261
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>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete
              sequence
          Length = 138824

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 220    cgatgtcggcgtcgtcgacgacgaggtcgccgt 252
              |||||||||||||| ||||||| ||| ||||||
Sbjct: 107077 cgatgtcggcgtcggcgacgacaaggccgccgt 107045
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 218      gccgatgtcggcgtcgtcgacgacg 242
                |||||||||| ||||||||||||||
Sbjct: 18403096 gccgatgtcgtcgtcgtcgacgacg 18403072



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 226      cggcgtcgtcgacgacgagg 245
                ||||||||||||||||||||
Sbjct: 12249186 cggcgtcgtcgacgacgagg 12249167
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 220      cgatgtcggcgtcgtcgacgacgaggtcgccgt 252
                |||||||||||||| ||||||| ||| ||||||
Sbjct: 20705625 cgatgtcggcgtcggcgacgacaaggccgccgt 20705593



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 225      tcggcgtcgtcgacgacgag 244
                ||||||||||||||||||||
Sbjct: 21068348 tcggcgtcgtcgacgacgag 21068367
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 233     gtcgacgacgaggtcgccgttgatg 257
               |||||||||||||||||||| ||||
Sbjct: 1766710 gtcgacgacgaggtcgccgtcgatg 1766734
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 220      cgatgtcggcgtcgtcgacgacgaggtcgccgt 252
                |||||||||||||| ||||||| ||| ||||||
Sbjct: 20716897 cgatgtcggcgtcggcgacgacaaggccgccgt 20716865



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 225      tcggcgtcgtcgacgacgag 244
                ||||||||||||||||||||
Sbjct: 21079612 tcggcgtcgtcgacgacgag 21079631
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>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15,
              complete sequence
          Length = 133413

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 218    gccgatgtcggcgtcgtcgacgacg 242
              |||||||||| ||||||||||||||
Sbjct: 105019 gccgatgtcgtcgtcgtcgacgacg 104995
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>ref|XM_471550.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 837

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cggcgtcgtcgacgacgagg 245
           ||||||||||||||||||||
Sbjct: 214 cggcgtcgtcgacgacgagg 195
to top
>ref|NM_197655.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0015J15.29), mRNA
          Length = 1440

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 225 tcggcgtcgtcgacgacgag 244
           ||||||||||||||||||||
Sbjct: 85  tcggcgtcgtcgacgacgag 66
to top
>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 230137

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcttaaatacaagagaggtt 87
             ||||||||||||||||||||
Sbjct: 82654 tcttaaatacaagagaggtt 82673
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 350     cttcttctcgccgctgacgg 369
               ||||||||||||||||||||
Sbjct: 3593435 cttcttctcgccgctgacgg 3593454
to top
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 356     ctcgccgctgacggcgatga 375
               ||||||||||||||||||||
Sbjct: 1323852 ctcgccgctgacggcgatga 1323871
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 387     ccgacccagccgatccagccggcg 410
               |||| |||||||||||||||||||
Sbjct: 5065965 ccgaaccagccgatccagccggcg 5065988
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 223     tgtcggcgtcgtcgacgacg 242
               ||||||||||||||||||||
Sbjct: 1625246 tgtcggcgtcgtcgacgacg 1625227
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>emb|AL445928.8| Human DNA sequence from clone RP11-305E17 on chromosome 1, complete
              sequence
          Length = 173580

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 90     atttctccatgatcctatcagctcctac 117
              ||||||||||||||| |||| |||||||
Sbjct: 156375 atttctccatgatccaatcacctcctac 156348
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>emb|X13495.1|CRPSAF C.reinhardtii mRNA for 17 kd P21 protein of photosystem I
          Length = 1227

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 477 aggtggggcaggccgtcggagccgcagagcaggccg 512
           ||||||||||| ||||||  |||||| |||||||||
Sbjct: 416 aggtggggcagaccgtcgttgccgcacagcaggccg 381
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>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 352    tcttctcgccgctgacggcgatga 375
              |||||||||||||||||| |||||
Sbjct: 190124 tcttctcgccgctgacggtgatga 190147
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>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 352    tcttctcgccgctgacggcgatga 375
              |||||||||||||||||| |||||
Sbjct: 103960 tcttctcgccgctgacggtgatga 103983
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>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 505    gcaggccgaacttgccgtag 524
              ||||||||||||||||||||
Sbjct: 250220 gcaggccgaacttgccgtag 250239
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>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12
          Length = 346359

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 352    tcttctcgccgctgacggcgatga 375
              |||||||||||||||||| |||||
Sbjct: 179689 tcttctcgccgctgacggtgatga 179712
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>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 470   gacgatgaggtggggcaggccgtc 493
             |||||| |||||||||||||||||
Sbjct: 13091 gacgatcaggtggggcaggccgtc 13068
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    cggcgtcgtcgacgacgagg 245
              ||||||||||||||||||||
Sbjct: 228093 cggcgtcgtcgacgacgagg 228112
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>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05,
             complete sequence
          Length = 185211

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   cggcgtcgtcgacgacgagg 245
             ||||||||||||||||||||
Sbjct: 74067 cggcgtcgtcgacgacgagg 74048
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>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
              complete sequence
          Length = 145070

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 224    gtcggcgtcgtcgacgacgaggtcgccg 251
              |||| ||||||||||||||| |||||||
Sbjct: 102007 gtcgtcgtcgtcgacgacgacgtcgccg 102034
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>gb|AE012083.1| Xanthomonas axonopodis pv. citri str. 306,  section 461 of 469 of the
            complete genome
          Length = 10370

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 387  ccgacccagccgatccagccggcg 410
            |||| |||||||||||||||||||
Sbjct: 1205 ccgaaccagccgatccagccggcg 1228
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>ref|NM_169641.2| Drosophila melanogaster Tropomyosin 1 CG4898-RI, transcript variant I
            (Tm1), mRNA
          Length = 2480

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   attgggttagtttcttaaat 75
            ||||||||||||||||||||
Sbjct: 2243 attgggttagtttcttaaat 2262
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>ref|NM_169640.1| Drosophila melanogaster Tropomyosin 1 CG4898-RC, transcript variant C
            (Tm1), mRNA
          Length = 3668

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   attgggttagtttcttaaat 75
            ||||||||||||||||||||
Sbjct: 3431 attgggttagtttcttaaat 3450
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>ref|NM_169639.2| Drosophila melanogaster Tropomyosin 1 CG4898-RH, transcript variant H
            (Tm1), mRNA
          Length = 3058

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   attgggttagtttcttaaat 75
            ||||||||||||||||||||
Sbjct: 2821 attgggttagtttcttaaat 2840
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>gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, complete sequence
          Length = 177539

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    gccccagtgccgctggtcgc 465
              ||||||||||||||||||||
Sbjct: 154061 gccccagtgccgctggtcgc 154042
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>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete
              sequence
          Length = 144798

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    tcggcgtcgtcgacgacgag 244
              ||||||||||||||||||||
Sbjct: 137358 tcggcgtcgtcgacgacgag 137339
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>gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, complete sequence
          Length = 175472

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   gccccagtgccgctggtcgc 465
             ||||||||||||||||||||
Sbjct: 32945 gccccagtgccgctggtcgc 32926
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>gb|AY084208.1| Drosophila melanogaster SD07763 full insert cDNA
          Length = 6251

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   attgggttagtttcttaaat 75
            ||||||||||||||||||||
Sbjct: 3978 attgggttagtttcttaaat 3997
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>gb|AY060262.1| Drosophila melanogaster GH09289 full length cDNA
          Length = 3662

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   attgggttagtttcttaaat 75
            ||||||||||||||||||||
Sbjct: 3410 attgggttagtttcttaaat 3429
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     tggcggcgagctcgacgtcg 326
               ||||||||||||||||||||
Sbjct: 1823593 tggcggcgagctcgacgtcg 1823612
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 224     gtcggcgtcgtcgacgacga 243
               ||||||||||||||||||||
Sbjct: 3776403 gtcggcgtcgtcgacgacga 3776422
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    ccagccgatccagccggcga 411
              ||||||||||||||||||||
Sbjct: 655758 ccagccgatccagccggcga 655777
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>emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 in linkage group 20,
             complete sequence
          Length = 151560

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    attgggttagtttcttaaat 75
             ||||||||||||||||||||
Sbjct: 31769 attgggttagtttcttaaat 31750
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 224     gtcggcgtcgtcgacgacgaggtcgccg 251
               |||| ||||||||||||||| |||||||
Sbjct: 4734002 gtcgtcgtcgtcgacgacgacgtcgccg 4734029
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>gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, region 88E-88F, BAC clone
             BACR13A02, complete sequence
          Length = 166141

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    attgggttagtttcttaaat 75
             ||||||||||||||||||||
Sbjct: 56503 attgggttagtttcttaaat 56522
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 391     cccagccgatccagccggcg 410
               ||||||||||||||||||||
Sbjct: 3034808 cccagccgatccagccggcg 3034827
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>gb|AF135791.1|AF135791 Chlamydomonas reinhardtii photosystem I subunit F precursor (psaF)
            gene, complete cds
          Length = 2332

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 477  aggtggggcaggccgtcggagccgcagagcaggccg 512
            ||||||||||| ||||||  |||||| |||||||||
Sbjct: 1053 aggtggggcagaccgtcgttgccgcacagcaggccg 1018
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>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete
              sequence
          Length = 236375

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     attgggttagtttcttaaat 75
              ||||||||||||||||||||
Sbjct: 100935 attgggttagtttcttaaat 100954
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>gb|BT001902.1| Drosophila melanogaster SD21996 full insert cDNA
          Length = 3076

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   attgggttagtttcttaaat 75
            ||||||||||||||||||||
Sbjct: 2821 attgggttagtttcttaaat 2840
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 238     cgacgaggtcgccgttgatgagct 261
               ||||||||||| ||||||||||||
Sbjct: 1147951 cgacgaggtcgtcgttgatgagct 1147974
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     gagaggttccatttctccat 99
              ||||||||||||||||||||
Sbjct: 418732 gagaggttccatttctccat 418713
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>dbj|AB209672.1| Homo sapiens mRNA for Transducin-like enhancer of split 3 splice
            variant 1 variant protein
          Length = 7809

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 446  gccccagtgccgctggtcgc 465
            ||||||||||||||||||||
Sbjct: 1741 gccccagtgccgctggtcgc 1760
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
            complete sequence
          Length = 187956

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 224  gtcggcgtcgtcgacgacgaggtcgccg 251
            |||| ||||||||||||||| |||||||
Sbjct: 6410 gtcgtcgtcgtcgacgacgacgtcgccg 6437


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,641,531
Number of Sequences: 3902068
Number of extensions: 3641531
Number of successful extensions: 76838
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 74617
Number of HSP's gapped (non-prelim): 2203
length of query: 572
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 549
effective length of database: 17,143,297,704
effective search space: 9411670439496
effective search space used: 9411670439496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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