>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099P06, complete sequence
          Length = 135117

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 71/83 (85%), Gaps = 3/83 (3%)
 Strand = Plus / Plus

                                                                         
Query: 538   ggaaagcaccttcagatcaactactgtggtaggaacca-ttaggtctt--acgttccttt 594
             ||||||||||||||||||||||| | |||||| || || |||| ||||  |  || ||||
Sbjct: 84566 ggaaagcaccttcagatcaactaatatggtagaaaacatttagctctttaagttttcttt 84625

                                    
Query: 595   tccagattttacacccatctatt 617
              ||||||||||||||||||||||
Sbjct: 84626 cccagattttacacccatctatt 84648

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 71/83 (85%), Gaps = 3/83 (3%)
 Strand = Plus / Plus

                                                                           
Query: 538     ggaaagcaccttcagatcaactactgtggtaggaacca-ttaggtctt--acgttccttt 594
               ||||||||||||||||||||||| | |||||| || || |||| ||||  |  || ||||
Sbjct: 3662219 ggaaagcaccttcagatcaactaatatggtagaaaacatttagctctttaagttttcttt 3662278

                                      
Query: 595     tccagattttacacccatctatt 617
                ||||||||||||||||||||||
Sbjct: 3662279 cccagattttacacccatctatt 3662301

>dbj|AK120340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060N21, full
            insert sequence
          Length = 6226

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 71/83 (85%), Gaps = 3/83 (3%)
 Strand = Plus / Minus

                                                                        
Query: 538  ggaaagcaccttcagatcaactactgtggtaggaacca-ttaggtctt--acgttccttt 594
            ||||||||||||||||||||||| | |||||| || || |||| ||||  |  || ||||
Sbjct: 2684 ggaaagcaccttcagatcaactaatatggtagaaaacatttagctctttaagttttcttt 2625

                                   
Query: 595  tccagattttacacccatctatt 617
             ||||||||||||||||||||||
Sbjct: 2624 cccagattttacacccatctatt 2602

>dbj|AK106311.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D04, full
            insert sequence
          Length = 1685

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 71/83 (85%), Gaps = 3/83 (3%)
 Strand = Plus / Minus

                                                                        
Query: 538  ggaaagcaccttcagatcaactactgtggtaggaacca-ttaggtctt--acgttccttt 594
            ||||||||||||||||||||||| | |||||| || || |||| ||||  |  || ||||
Sbjct: 1100 ggaaagcaccttcagatcaactaatatggtagaaaacatttagctctttaagttttcttt 1041

                                   
Query: 595  tccagattttacacccatctatt 617
             ||||||||||||||||||||||
Sbjct: 1040 cccagattttacacccatctatt 1018

>gb|AC005774.1|AC005774 Homo sapiens chromosome 16, BAC clone 26O3 (LANL), complete sequence
          Length = 164538

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 405   ctttctctcctttcattttccc 426
             ||||||||||||||||||||||
Sbjct: 80549 ctttctctcctttcattttccc 80570

>gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete sequence
          Length = 122694

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 406   tttctctcctttcattttccc 426
             |||||||||||||||||||||
Sbjct: 69986 tttctctcctttcattttccc 70006

>emb|AL135934.19| Human DNA sequence from clone RP5-945I17 on chromosome 11p12-13,
             complete sequence
          Length = 93708

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 406   tttctctcctttcattttcccatca 430
             ||||||||||||||| |||||||||
Sbjct: 16057 tttctctcctttcatcttcccatca 16081

>gb|AC090467.6| Homo sapiens chromosome 11, clone RP11-634M17, complete sequence
          Length = 208525

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 406   tttctctcctttcattttcccatca 430
             ||||||||||||||| |||||||||
Sbjct: 65065 tttctctcctttcatcttcccatca 65041

>emb|CR812484.8| Zebrafish DNA sequence from clone DKEY-83B16 in linkage group 18,
            complete sequence
          Length = 149153

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 134  gggagagatagatagtgtaca 154
            |||||||||||||||||||||
Sbjct: 1475 gggagagatagatagtgtaca 1455

>gb|AC133578.12| Mus musculus chromosome 15, clone RP23-212I23, complete sequence
          Length = 235230

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 284    aaatagataacagatttgtga 304
              |||||||||||||||||||||
Sbjct: 119206 aaatagataacagatttgtga 119186

>emb|AL954717.9| Zebrafish DNA sequence from clone CH211-215E6 in linkage group 24,
              complete sequence
          Length = 211099

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 358    tagatgcatctttgtttccaa 378
              |||||||||||||||||||||
Sbjct: 181488 tagatgcatctttgtttccaa 181508

>gb|AC145600.6| Mus musculus BAC clone RP24-220P24 from chromosome y, complete sequence
          Length = 171542

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 430    aaatggctatctgcaaatacattc 453
              ||||||| ||||||||||||||||
Sbjct: 170809 aaatggcaatctgcaaatacattc 170786

>gb|AC175390.2| Mus musculus BAC clone RP24-108F5 from chromosome y, complete sequence
          Length = 179677

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 430   aaatggctatctgcaaatacattc 453
             ||||||| ||||||||||||||||
Sbjct: 85679 aaatggcaatctgcaaatacattc 85702

>gb|AC127236.3| Mus musculus BAC clone RP24-351L1 from chromosome 18, complete sequence
          Length = 188946

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    atttgtgatattggtagcat 316
              ||||||||||||||||||||
Sbjct: 119349 atttgtgatattggtagcat 119330

>gb|AC130819.4| Mus musculus BAC clone RP23-118O2 from chromosome 19, complete sequence
          Length = 223575

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    acatcaactcatttatgttt 397
              ||||||||||||||||||||
Sbjct: 119590 acatcaactcatttatgttt 119571

>emb|AL671983.18| Mouse DNA sequence from clone RP23-232B3 on chromosome X, complete
              sequence
          Length = 176577

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    gtgcccttttgttctgctta 353
              ||||||||||||||||||||
Sbjct: 100690 gtgcccttttgttctgctta 100671

>gb|AC084880.12| Homo sapiens 12 BAC RP11-64B16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 110001

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    actcttccatagtacaatat 40
             ||||||||||||||||||||
Sbjct: 91881 actcttccatagtacaatat 91862

>gb|DQ123841.1| Agrotis segetum nucleopolyhedrovirus, complete genome
          Length = 147544

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 356    tgtagatgcatctttgtttc 375
              ||||||||||||||||||||
Sbjct: 100973 tgtagatgcatctttgtttc 100954

>gb|AC182036.2| Mus musculus BAC clone RP24-120L13 from chromosome y, complete sequence
          Length = 185554

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 430   aaatggctatctgcaaatacattc 453
             ||||||| ||||||||||||||||
Sbjct: 30765 aaatggcaatctgcaaatacattc 30788

>emb|BX890610.8| Zebrafish DNA sequence from clone DKEY-122C9, complete sequence
          Length = 189827

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   tctgcttatatgtagatgca 365
             ||||||||||||||||||||
Sbjct: 34954 tctgcttatatgtagatgca 34973

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 265      gtagaaacatggcccattta 284
                ||||||||||||||||||||
Sbjct: 10126333 gtagaaacatggcccattta 10126352

>gb|AC098804.6| Homo sapiens chromosome 16 clone RP11-244P19, complete sequence
          Length = 62309

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   atttaaatagataacagatt 299
             ||||||||||||||||||||
Sbjct: 50573 atttaaatagataacagatt 50554

>gb|AC007099.3| Homo sapiens BAC clone RP11-445A14 from 2, complete sequence
          Length = 125032

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   ctgaattcttcttgggaaag 543
             ||||||||||||||||||||
Sbjct: 40669 ctgaattcttcttgggaaag 40650

>gb|AC008151.1| Homo sapiens 3 BAC CITB-243A6 (California Institute of Technology BAC
              Library) complete sequence
          Length = 178242

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    tggtgtgcccttttgttctg 349
              ||||||||||||||||||||
Sbjct: 138247 tggtgtgcccttttgttctg 138266

>gb|AC026161.4|AC026161 Homo sapiens chromosome 3 clone RP11-105K13 map 3p, complete sequence
          Length = 167579

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    tggtgtgcccttttgttctg 349
              ||||||||||||||||||||
Sbjct: 157333 tggtgtgcccttttgttctg 157314

>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 351    ttatatgtagatgcatctttgttt 374
              ||||||||||||| ||||||||||
Sbjct: 222209 ttatatgtagatgaatctttgttt 222232

>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0017G06
          Length = 150628

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   gtagaaacatggcccattta 284
             ||||||||||||||||||||
Sbjct: 74027 gtagaaacatggcccattta 74046

>emb|BX294114.8| Zebrafish DNA sequence from clone DKEY-152J12 in linkage group 1,
             complete sequence
          Length = 195651

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    gctgaaaattaatctttaca 93
             ||||||||||||||||||||
Sbjct: 47925 gctgaaaattaatctttaca 47906

>dbj|AP001273.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-836D15, complete
             sequence
          Length = 58000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 335   tgcccttttgttctgcttatatgt 358
             ||||||||||||||| ||||||||
Sbjct: 19576 tgcccttttgttctgtttatatgt 19599

>emb|Z48585.1|CEZK673 Caenorhabditis elegans Cosmid ZK673, complete sequence
          Length = 27540

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   ttctctcctttcattttccc 426
             ||||||||||||||||||||
Sbjct: 25495 ttctctcctttcattttccc 25476

>dbj|AP006673.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT30L06, TM0369b,
            complete sequence
          Length = 39734

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 166  aagtgaaataattggatgtctaag 189
            |||| |||||||||||||||||||
Sbjct: 7467 aagtcaaataattggatgtctaag 7444

>emb|AL645524.8| Mouse DNA sequence from clone RP23-35D7 on chromosome 11, complete
             sequence
          Length = 210163

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   ttctgcttatatgtagatgc 364
             ||||||||||||||||||||
Sbjct: 70550 ttctgcttatatgtagatgc 70531

>dbj|AB079299.1| Caenorhabditis elegans tnc-2 gene for troponin C, complete cds
          Length = 3837

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 407  ttctctcctttcattttccc 426
            ||||||||||||||||||||
Sbjct: 2434 ttctctcctttcattttccc 2415


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,209,113
Number of Sequences: 3902068
Number of extensions: 6209113
Number of successful extensions: 126249
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126077
Number of HSP's gapped (non-prelim): 172
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)