| Clone Name | rbags25d13 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX511123.10| Zebrafish DNA sequence from clone DKEY-201I6 in linkage group 16, complete sequence Length = 159464 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 gaaatctgagggctcatcctc 114 ||||||||||||||||||||| Sbjct: 135620 gaaatctgagggctcatcctc 135640
>gb|AC009407.8| Homo sapiens BAC clone RP11-223I10 from 2, complete sequence Length = 202568 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cctcccatttacaagctacat 131 ||||||||||||||||||||| Sbjct: 141541 cctcccatttacaagctacat 141561
>gb|AC102197.7| Mus musculus chromosome 1, clone RP24-466J11, complete sequence Length = 150253 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tcaaccaggaaatctgaggg 105 |||||||||||||||||||| Sbjct: 142310 tcaaccaggaaatctgaggg 142291
>emb|BX649528.15| Zebrafish DNA sequence from clone DKEY-19F4 in linkage group 5, complete sequence Length = 205281 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tctgagggctcatcctccca 117 |||||||||||||||||||| Sbjct: 98599 tctgagggctcatcctccca 98580
>gb|AC162880.4| Mus musculus chromosome 1, clone RP24-275N11, complete sequence Length = 164201 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tcaaccaggaaatctgaggg 105 |||||||||||||||||||| Sbjct: 29697 tcaaccaggaaatctgaggg 29678
>gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, complete sequence Length = 183101 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 ttacaagctacattattatcaaaa 142 ||||||||||||||||| |||||| Sbjct: 120949 ttacaagctacattattctcaaaa 120972
>gb|AC104464.2| Homo sapiens chromosome 1 clone RP5-994L8, complete sequence Length = 153772 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gacattcaaccaggaaatct 100 |||||||||||||||||||| Sbjct: 59060 gacattcaaccaggaaatct 59079
>gb|M16575.1|EIAVCG Equine infectious anemia virus proviral DNA, complete genome Length = 8407 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tacaagctacattattatcaaaag 143 |||| ||||||||||||||||||| Sbjct: 4557 tacatgctacattattatcaaaag 4580 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,678,325 Number of Sequences: 3902068 Number of extensions: 1678325 Number of successful extensions: 35318 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 35300 Number of HSP's gapped (non-prelim): 18 length of query: 231 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 209 effective length of database: 17,147,199,772 effective search space: 3583764752348 effective search space used: 3583764752348 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)