ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469973.1| Oryza sativa (japonica cultivar-group), mRNA 281 1e-72
2dbj|AK099884.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 1e-72
3dbj|AK069591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 1e-72
4gb|AY104601.1| Zea mays PCO085879 mRNA sequence 232 1e-57
5gb|BT024078.1| Zea mays clone EL01N0521E04 mRNA sequence 208 2e-50
6gb|BT016441.1| Zea mays clone Contig274 mRNA sequence 206 7e-50
7gb|BT019199.1| Zea mays clone Contig872.F mRNA sequence 200 4e-48
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 184 2e-43
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
10gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genom... 184 2e-43
11gb|AY389644.1| Hyacinthus orientalis vacuolar protein sorting-as... 78 4e-11
12ref|NM_106235.3| Arabidopsis thaliana unknown protein AT1G75850 ... 60 1e-05
13emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1... 52 0.002
14gb|AC167715.2| Mus musculus chromosome 5, clone wi1-475E8, compl... 44 0.58
15emb|AJ719889.1| Gallus gallus mRNA for hypothetical protein, clo... 44 0.58
16gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete seq... 44 0.58
17gb|AC171013.3| Gallus gallus BAC clone CH261-71N5 from chromosom... 44 0.58
18ref|NM_114990.2| Arabidopsis thaliana unknown protein AT3G51310 ... 42 2.3
19gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 42 2.3
20emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g... 42 2.3
21gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, comple... 42 2.3
22gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 42 2.3
23emb|BX825234.1|CNS0A66M Arabidopsis thaliana Full-length cDNA Co... 42 2.3
24gb|AC153773.3| Loxodonta africana clone VMRC15-519D8, complete s... 42 2.3
25gb|AC002531.1|AC002531 Homo sapiens chromosome Y, clone 486_O_8,... 42 2.3
26dbj|AB084905.1| Paralichthys olivaceus mRNA for perforin, comple... 42 2.3
27gb|AC004474.1|AC004474 Homo sapiens chromosome Y, clone 475I1, c... 42 2.3
28dbj|AP001998.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.3
29gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 42 2.3
30dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 2.3
31gb|AC117825.9| Mus musculus chromosome 18, clone RP24-80J4, comp... 40 9.0
32gb|AC113053.21| Mus musculus chromosome 17, clone RP23-250J2, co... 40 9.0
33gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
34gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
35ref|XM_581035.2| PREDICTED: Bos taurus similar to CG15021-PA, tr... 40 9.0
36gb|AC120164.7| Mus musculus chromosome 19, clone RP24-470C3, com... 40 9.0
37gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, co... 40 9.0
38gb|U39651.1| Caenorhabditis elegans cosmid ZK470, complete sequence 40 9.0
39gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome... 40 9.0
40ref|XM_445920.1| Candida glabrata CBS138, CAGL0E05324g partial mRNA 40 9.0
41gb|AC135356.2| Mus musculus BAC clone RP24-545J19 from chromosom... 40 9.0
42gb|AC132221.3| Mus musculus BAC clone RP24-545C12 from chromosom... 40 9.0
43gb|AC116463.9| Mus musculus chromosome 17, clone RP23-30P1, comp... 40 9.0
44gb|AC122842.3| Mus musculus BAC clone RP23-148K14 from 1, comple... 40 9.0
45gb|AC103930.10| Mus musculus chromosome 5, clone RP23-238D18, co... 40 9.0
46gb|AC025047.17| Mus musculus chromosome 1, clone RP23-56I8, comp... 40 9.0
47emb|AL732372.15| Human DNA sequence from clone RP4-669L17 on chr... 40 9.0
48emb|AL353654.29| Human DNA sequence from clone RP1-24O22 on chro... 40 9.0
49emb|AL031259.1|HS191N21 Human DNA sequence from clone RP1-191N21... 40 9.0
50emb|CR380951.1| Candida glabrata strain CBS138 chromosome E comp... 40 9.0
51emb|CR938745.1| Human DNA sequence from clone XX-HCC1954_32J13, ... 40 9.0
52emb|CR786561.14| Zebrafish DNA sequence from clone CH211-233K18 ... 40 9.0
53gb|AC090844.7| Homo sapiens chromosome 17, clone RP11-387H17, co... 40 9.0
54gb|AC129907.3| Homo sapiens chromosome 15, clone CTD-2280M1, com... 40 9.0
55gb|AC069307.7| Homo sapiens BAC clone RP11-738E22 from 4, comple... 40 9.0
56dbj|AK139683.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 40 9.0
57gb|AC157548.7| Mus musculus chromosome 18, clone RP24-310H1, com... 40 9.0
58gb|AC140725.3| Homo sapiens chromosome 15, clone, complete sequence 40 9.0
59gb|AC092192.1|AC092192 Homo sapiens chromosome 19 clone LLNLF-12... 40 9.0
60ref|NM_076305.4| Caenorhabditis elegans NCK (Non-Catalytic regio... 40 9.0
61ref|NM_076306.3| Caenorhabditis elegans NCK (Non-Catalytic regio... 40 9.0
62dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
63dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
64gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, comple... 40 9.0
65gb|AC139237.2| Homo sapiens chromosome 5 clone XXcos-B22C68, com... 40 9.0
66gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, com... 40 9.0
67gb|AC107977.13| Homo sapiens chromosome 15, clone CTD-2611K5, co... 40 9.0
68gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, comp... 40 9.0
69gb|AF276881.1|AF276881 Homo sapiens clone 15qtel_ctg0223_c140at7... 40 9.0
70gb|AC138030.1| Homo sapiens chromosome 5 clone XXcos-B22C100, co... 40 9.0
71gb|AC114498.2| Homo sapiens chromosome 1 clone RP5-857K21, compl... 40 9.0
72gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana... 40 9.0
73dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
74gb|AC004842.2|AC004842 Homo sapiens PAC clone RP4-609N19 from 7p... 40 9.0
75gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, comple... 40 9.0
76gb|AC136371.4| Mus musculus chromosome 1, clone RP23-405G16, com... 40 9.0
77ref|NR_002886.1| Mus musculus tubulin, alpha 2 pseudogene (LOC62... 40 9.0
78emb|AL929284.12| Zebrafish DNA sequence from clone CH211-160H23 ... 40 9.0
79emb|AJ877905.1| Human immunodeficiency virus type 1 subtype A pr... 40 9.0
80emb|AL929347.8| Human DNA sequence from clone RP3-433O3 on chrom... 40 9.0 
>ref|XM_469973.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2851

 Score =  281 bits (142), Expect = 1e-72
 Identities = 253/290 (87%)
 Strand = Plus / Minus

                                                                        
Query: 365  ttttatctgttcatacttttctcctatgcttccacctttctgcttctggaattcgatgta 424
            |||||| || ||||| ||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 2420 ttttatttgctcatatttttcacctatgctcccacctttctgcttctggaattcaatgta 2361

                                                                        
Query: 425  tcgtagagtgcttgcaaagaaagcttcggcagatggatcagatgcactgctgtcattttg 484
             |||| ||||||||||||||| || || |  |||||||||| | || || | ||| ||||
Sbjct: 2360 acgtaaagtgcttgcaaagaaggcctctgtcgatggatcagctacagtgttctcactttg 2301

                                                                        
Query: 485  cttctctgtcctgatcagttcgatcaaatcttggatgacagtgttcgtgatttgtggaat 544
            |||||||||||| |||| ||| |||||||| ||||| |||||||||||||| | ||||||
Sbjct: 2300 cttctctgtcctaatcaattcaatcaaatcctggattacagtgttcgtgatctctggaat 2241

                                                                        
Query: 545  tcctttctcaaagaagtacagatacttgttcaaaatttcaataaatagaatgacagatcc 604
            ||||||||| |||||||||| |||||||||||||||||| ||||||||   |||||||||
Sbjct: 2240 tcctttctcgaagaagtacaaatacttgttcaaaatttcgataaatagcgcgacagatcc 2181

                                                              
Query: 605  gctgcttccctttgatacattagccatttgttgagcagcatttgcaattc 654
            ||| |||||| ||| |||||||||||| |||||||| |||||||||||||
Sbjct: 2180 gctacttccccttgttacattagccatctgttgagcggcatttgcaattc 2131



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 79/92 (85%), Gaps = 2/92 (2%)
 Strand = Plus / Minus

                                                                        
Query: 43   aagaaaaaggaattacaacaatggcactccggtacacaagtatc-ctgtacagacctgag 101
            |||||||||||  ||||||||||  |||| |||||||||||  | ||||||||| |||||
Sbjct: 2716 aagaaaaaggatatacaacaatgatactctggtacacaagttgcgctgtacagatctgag 2657

                                            
Query: 102  cttcccaaagagtacagcttattaccacctga 133
            |||||| ||| ||| |||||||| ||||||||
Sbjct: 2656 cttccc-aagggtaaagcttattgccacctga 2626
to top
>dbj|AK099884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111P21, full
            insert sequence
          Length = 2931

 Score =  281 bits (142), Expect = 1e-72
 Identities = 253/290 (87%)
 Strand = Plus / Minus

                                                                        
Query: 365  ttttatctgttcatacttttctcctatgcttccacctttctgcttctggaattcgatgta 424
            |||||| || ||||| ||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 2512 ttttatttgctcatatttttcacctatgctcccacctttctgcttctggaattcaatgta 2453

                                                                        
Query: 425  tcgtagagtgcttgcaaagaaagcttcggcagatggatcagatgcactgctgtcattttg 484
             |||| ||||||||||||||| || || |  |||||||||| | || || | ||| ||||
Sbjct: 2452 acgtaaagtgcttgcaaagaaggcctctgtcgatggatcagctacagtgttctcactttg 2393

                                                                        
Query: 485  cttctctgtcctgatcagttcgatcaaatcttggatgacagtgttcgtgatttgtggaat 544
            |||||||||||| |||| ||| |||||||| ||||| |||||||||||||| | ||||||
Sbjct: 2392 cttctctgtcctaatcaattcaatcaaatcctggattacagtgttcgtgatctctggaat 2333

                                                                        
Query: 545  tcctttctcaaagaagtacagatacttgttcaaaatttcaataaatagaatgacagatcc 604
            ||||||||| |||||||||| |||||||||||||||||| ||||||||   |||||||||
Sbjct: 2332 tcctttctcgaagaagtacaaatacttgttcaaaatttcgataaatagcgcgacagatcc 2273

                                                              
Query: 605  gctgcttccctttgatacattagccatttgttgagcagcatttgcaattc 654
            ||| |||||| ||| |||||||||||| |||||||| |||||||||||||
Sbjct: 2272 gctacttccccttgttacattagccatctgttgagcggcatttgcaattc 2223



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 79/92 (85%), Gaps = 2/92 (2%)
 Strand = Plus / Minus

                                                                        
Query: 43   aagaaaaaggaattacaacaatggcactccggtacacaagtatc-ctgtacagacctgag 101
            |||||||||||  ||||||||||  |||| |||||||||||  | ||||||||| |||||
Sbjct: 2808 aagaaaaaggatatacaacaatgatactctggtacacaagttgcgctgtacagatctgag 2749

                                            
Query: 102  cttcccaaagagtacagcttattaccacctga 133
            |||||| ||| ||| |||||||| ||||||||
Sbjct: 2748 cttccc-aagggtaaagcttattgccacctga 2718
to top
>dbj|AK069591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023M08, full
            insert sequence
          Length = 3011

 Score =  281 bits (142), Expect = 1e-72
 Identities = 253/290 (87%)
 Strand = Plus / Minus

                                                                        
Query: 365  ttttatctgttcatacttttctcctatgcttccacctttctgcttctggaattcgatgta 424
            |||||| || ||||| ||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 2580 ttttatttgctcatatttttcacctatgctcccacctttctgcttctggaattcaatgta 2521

                                                                        
Query: 425  tcgtagagtgcttgcaaagaaagcttcggcagatggatcagatgcactgctgtcattttg 484
             |||| ||||||||||||||| || || |  |||||||||| | || || | ||| ||||
Sbjct: 2520 acgtaaagtgcttgcaaagaaggcctctgtcgatggatcagctacagtgttctcactttg 2461

                                                                        
Query: 485  cttctctgtcctgatcagttcgatcaaatcttggatgacagtgttcgtgatttgtggaat 544
            |||||||||||| |||| ||| |||||||| ||||| |||||||||||||| | ||||||
Sbjct: 2460 cttctctgtcctaatcaattcaatcaaatcctggattacagtgttcgtgatctctggaat 2401

                                                                        
Query: 545  tcctttctcaaagaagtacagatacttgttcaaaatttcaataaatagaatgacagatcc 604
            ||||||||| |||||||||| |||||||||||||||||| ||||||||   |||||||||
Sbjct: 2400 tcctttctcgaagaagtacaaatacttgttcaaaatttcgataaatagcgcgacagatcc 2341

                                                              
Query: 605  gctgcttccctttgatacattagccatttgttgagcagcatttgcaattc 654
            ||| |||||| ||| |||||||||||| |||||||| |||||||||||||
Sbjct: 2340 gctacttccccttgttacattagccatctgttgagcggcatttgcaattc 2291



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 79/92 (85%), Gaps = 2/92 (2%)
 Strand = Plus / Minus

                                                                        
Query: 43   aagaaaaaggaattacaacaatggcactccggtacacaagtatc-ctgtacagacctgag 101
            |||||||||||  ||||||||||  |||| |||||||||||  | ||||||||| |||||
Sbjct: 2876 aagaaaaaggatatacaacaatgatactctggtacacaagttgcgctgtacagatctgag 2817

                                            
Query: 102  cttcccaaagagtacagcttattaccacctga 133
            |||||| ||| ||| |||||||| ||||||||
Sbjct: 2816 cttccc-aagggtaaagcttattgccacctga 2786
to top
>gb|AY104601.1| Zea mays PCO085879 mRNA sequence
          Length = 1686

 Score =  232 bits (117), Expect = 1e-57
 Identities = 246/289 (85%)
 Strand = Plus / Minus

                                                                        
Query: 366  tttatctgttcatacttttctcctatgcttccacctttctgcttctggaattcgatgtat 425
            |||||||||||||| ||||| |||||||| ||||||||||||||||| ||||| ||||| 
Sbjct: 1155 tttatctgttcatatttttcgcctatgctcccacctttctgcttctgaaattcaatgtac 1096

                                                                        
Query: 426  cgtagagtgcttgcaaagaaagcttcggcagatggatcagatgcactgctgtcattttgc 485
            || | |||||| | |||||| || || | ||||||||||| | ||  | | ||| |||||
Sbjct: 1095 cgcaaagtgctagaaaagaatgcctctgtagatggatcagctacagagttatcactttgc 1036

                                                                        
Query: 486  ttctctgtcctgatcagttcgatcaaatcttggatgacagtgttcgtgatttgtggaatt 545
            ||||| || || |||| ||| ||||||||||| || |||||||| |||||||||||||||
Sbjct: 1035 ttctccgttctaatcaattcaatcaaatcttgaatcacagtgtttgtgatttgtggaatt 976

                                                                        
Query: 546  cctttctcaaagaagtacagatacttgttcaaaatttcaataaatagaatgacagatccg 605
            |||||||||||||||||||  ||||||||||||||||||||||||||  | |||||||| 
Sbjct: 975  cctttctcaaagaagtacaagtacttgttcaaaatttcaataaatagggttacagatcca 916

                                                             
Query: 606  ctgcttccctttgatacattagccatttgttgagcagcatttgcaattc 654
            ||||| ||| |||   || ||||||| ||||||||||||||||| ||||
Sbjct: 915  ctgctcccccttgtagcactagccatctgttgagcagcatttgcgattc 867



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 52/59 (88%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                       
Query: 76   acacaagta-tcctgtacagacctgagcttcccaaagagtacagcttattaccacctga 133
            ||||||||| ||||||||||||||| ||| |||||||   |||||||||| ||||||||
Sbjct: 1421 acacaagtaatcctgtacagacctgtgctccccaaaggacacagcttattgccacctga 1363
to top
>gb|BT024078.1| Zea mays clone EL01N0521E04 mRNA sequence
          Length = 2855

 Score =  208 bits (105), Expect = 2e-50
 Identities = 243/289 (84%)
 Strand = Plus / Minus

                                                                        
Query: 366  tttatctgttcatacttttctcctatgcttccacctttctgcttctggaattcgatgtat 425
            ||||| |||||||| ||||| |||||  ||||||||||||||||||| ||||| ||||| 
Sbjct: 2482 tttatttgttcatatttttcgcctatagttccacctttctgcttctgaaattcaatgtac 2423

                                                                        
Query: 426  cgtagagtgcttgcaaagaaagcttcggcagatggatcagatgcactgctgtcattttgc 485
            || | |||||| | |||||| || || | ||||||||||| | ||  | | ||| |||||
Sbjct: 2422 cgcaaagtgctagaaaagaatgcctctgtagatggatcagctacagagttatcactttgc 2363

                                                                        
Query: 486  ttctctgtcctgatcagttcgatcaaatcttggatgacagtgttcgtgatttgtggaatt 545
            ||||| || || |||| ||| ||||||||||| || |||||||| |||||||||||||||
Sbjct: 2362 ttctccgttctaatcaattcaatcaaatcttgaatcacagtgtttgtgatttgtggaatt 2303

                                                                        
Query: 546  cctttctcaaagaagtacagatacttgttcaaaatttcaataaatagaatgacagatccg 605
            |||||||||||||||||||  ||||||||||||||||||||||||||  | |||||||| 
Sbjct: 2302 cctttctcaaagaagtacaagtacttgttcaaaatttcaataaatagggttacagatcca 2243

                                                             
Query: 606  ctgcttccctttgatacattagccatttgttgagcagcatttgcaattc 654
            ||||| ||| |||   |  ||||||| ||||||||||||||||| ||||
Sbjct: 2242 ctgctcccccttgtagcgctagccatctgttgagcagcatttgcgattc 2194



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 51/59 (86%), Gaps = 3/59 (5%)
 Strand = Plus / Minus

                                                                       
Query: 76   acacaagta-tcctgtacagacctgagcttcccaaagagtacagcttattaccacctga 133
            ||||||||| ||||||||||||||| |||  ||||  || |||||||||| ||||||||
Sbjct: 2747 acacaagtaatcctgtacagacctgtgctcaccaa--aggacagcttattgccacctga 2691
to top
>gb|BT016441.1| Zea mays clone Contig274 mRNA sequence
          Length = 1532

 Score =  206 bits (104), Expect = 7e-50
 Identities = 239/284 (84%)
 Strand = Plus / Minus

                                                                        
Query: 366  tttatctgttcatacttttctcctatgcttccacctttctgcttctggaattcgatgtat 425
            ||||| |||||||| ||||| |||||  ||||||||||||||||||| ||||| ||||| 
Sbjct: 1165 tttatttgttcatatttttcgcctatagttccacctttctgcttctgaaattcaatgtac 1106

                                                                        
Query: 426  cgtagagtgcttgcaaagaaagcttcggcagatggatcagatgcactgctgtcattttgc 485
            || | |||||| | |||||| || || | ||||||||||| | ||  | | ||| |||||
Sbjct: 1105 cgcaaagtgctagaaaagaatgcctctgtagatggatcagctacagagttatcactttgc 1046

                                                                        
Query: 486  ttctctgtcctgatcagttcgatcaaatcttggatgacagtgttcgtgatttgtggaatt 545
            ||||| || || |||| ||| ||||||||||| || |||||||| |||||||||||||||
Sbjct: 1045 ttctccgttctaatcaattcaatcaaatcttgaatcacagtgtttgtgatttgtggaatt 986

                                                                        
Query: 546  cctttctcaaagaagtacagatacttgttcaaaatttcaataaatagaatgacagatccg 605
            |||||||||||||||||||  ||||||||||||||||||||||||||  | |||||||| 
Sbjct: 985  cctttctcaaagaagtacaagtacttgttcaaaatttcaataaatagggttacagatcca 926

                                                        
Query: 606  ctgcttccctttgatacattagccatttgttgagcagcatttgc 649
            ||||| ||| |||   |  ||||||| |||||||||||||||||
Sbjct: 925  ctgctcccccttgtagcgctagccatctgttgagcagcatttgc 882



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 51/59 (86%), Gaps = 3/59 (5%)
 Strand = Plus / Minus

                                                                       
Query: 76   acacaagta-tcctgtacagacctgagcttcccaaagagtacagcttattaccacctga 133
            ||||||||| ||||||||||||||| |||  ||||  || |||||||||| ||||||||
Sbjct: 1430 acacaagtaatcctgtacagacctgtgctcaccaa--aggacagcttattgccacctga 1374
to top
>gb|BT019199.1| Zea mays clone Contig872.F mRNA sequence
          Length = 1093

 Score =  200 bits (101), Expect = 4e-48
 Identities = 242/289 (83%)
 Strand = Plus / Minus

                                                                       
Query: 366 tttatctgttcatacttttctcctatgcttccacctttctgcttctggaattcgatgtat 425
           |||||||||||||| ||||| |||||||| ||||||||||||||||| ||||| ||||| 
Sbjct: 717 tttatctgttcatatttttcgcctatgctcccacctttctgcttctgaaattcaatgtac 658

                                                                       
Query: 426 cgtagagtgcttgcaaagaaagcttcggcagatggatcagatgcactgctgtcattttgc 485
           || | |||||| | |||||| || || | ||||||||||| | ||  | | ||| |||||
Sbjct: 657 cgcaaagtgctagaaaagaatgcctctgtagatggatcagctacagagttatcactttgc 598

                                                                       
Query: 486 ttctctgtcctgatcagttcgatcaaatcttggatgacagtgttcgtgatttgtggaatt 545
           ||||| || || |||| ||| ||||||||||| || || || || ||||| || ||||||
Sbjct: 597 ttctccgttctaatcaattcaatcaaatcttgaatcacggtatttgtgatctgcggaatt 538

                                                                       
Query: 546 cctttctcaaagaagtacagatacttgttcaaaatttcaataaatagaatgacagatccg 605
           |||||||||||||||||||  |||||||||||||| |||||||||||| | || ||||| 
Sbjct: 537 cctttctcaaagaagtacaagtacttgttcaaaatctcaataaatagagttacggatcca 478

                                                            
Query: 606 ctgcttccctttgatacattagccatttgttgagcagcatttgcaattc 654
           ||||||||| |||   || ||||||| ||||||||||||||||| ||||
Sbjct: 477 ctgcttccccttgtagcactagccatctgttgagcagcatttgcgattc 429



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 52/59 (88%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                      
Query: 76  acacaagta-tcctgtacagacctgagcttcccaaagagtacagcttattaccacctga 133
           ||||||||| ||||||||||||||| ||| |||||||   |||||||||| ||||||||
Sbjct: 983 acacaagtaatcctgtacagacctgtgctccccaaaggacacagcttattgccacctga 925
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  184 bits (93), Expect = 2e-43
 Identities = 177/205 (86%)
 Strand = Plus / Minus

                                                                            
Query: 365      ttttatctgttcatacttttctcctatgcttccacctttctgcttctggaattcgatgta 424
                |||||| || ||||| ||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 33128712 ttttatttgctcatatttttcacctatgctcccacctttctgcttctggaattcaatgta 33128653

                                                                            
Query: 425      tcgtagagtgcttgcaaagaaagcttcggcagatggatcagatgcactgctgtcattttg 484
                 |||| ||||||||||||||| || || |  |||||||||| | || || | ||| ||||
Sbjct: 33128652 acgtaaagtgcttgcaaagaaggcctctgtcgatggatcagctacagtgttctcactttg 33128593

                                                                            
Query: 485      cttctctgtcctgatcagttcgatcaaatcttggatgacagtgttcgtgatttgtggaat 544
                |||||||||||| |||| ||| |||||||| ||||| |||||||||||||| | ||||||
Sbjct: 33128592 cttctctgtcctaatcaattcaatcaaatcctggattacagtgttcgtgatctctggaat 33128533

                                         
Query: 545      tcctttctcaaagaagtacagatac 569
                ||||||||| |||||||||| ||||
Sbjct: 33128532 tcctttctcgaagaagtacaaatac 33128508



 Score =  103 bits (52), Expect = 7e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                            
Query: 567      tacttgttcaaaatttcaataaatagaatgacagatccgctgcttccctttgatacatta 626
                ||||||||||||||||| ||||||||   |||||||||||| |||||| ||| |||||||
Sbjct: 33128428 tacttgttcaaaatttcgataaatagcgcgacagatccgctacttccccttgttacatta 33128369

                                            
Query: 627      gccatttgttgagcagcatttgcaattc 654
                ||||| |||||||| |||||||||||||
Sbjct: 33128368 gccatctgttgagcggcatttgcaattc 33128341



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 79/92 (85%), Gaps = 2/92 (2%)
 Strand = Plus / Minus

                                                                            
Query: 43       aagaaaaaggaattacaacaatggcactccggtacacaagtatc-ctgtacagacctgag 101
                |||||||||||  ||||||||||  |||| |||||||||||  | ||||||||| |||||
Sbjct: 33129008 aagaaaaaggatatacaacaatgatactctggtacacaagttgcgctgtacagatctgag 33128949

                                                
Query: 102      cttcccaaagagtacagcttattaccacctga 133
                |||||| ||| ||| |||||||| ||||||||
Sbjct: 33128948 cttccc-aagggtaaagcttattgccacctga 33128918
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  184 bits (93), Expect = 2e-43
 Identities = 177/205 (86%)
 Strand = Plus / Minus

                                                                            
Query: 365      ttttatctgttcatacttttctcctatgcttccacctttctgcttctggaattcgatgta 424
                |||||| || ||||| ||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 33219222 ttttatttgctcatatttttcacctatgctcccacctttctgcttctggaattcaatgta 33219163

                                                                            
Query: 425      tcgtagagtgcttgcaaagaaagcttcggcagatggatcagatgcactgctgtcattttg 484
                 |||| ||||||||||||||| || || |  |||||||||| | || || | ||| ||||
Sbjct: 33219162 acgtaaagtgcttgcaaagaaggcctctgtcgatggatcagctacagtgttctcactttg 33219103

                                                                            
Query: 485      cttctctgtcctgatcagttcgatcaaatcttggatgacagtgttcgtgatttgtggaat 544
                |||||||||||| |||| ||| |||||||| ||||| |||||||||||||| | ||||||
Sbjct: 33219102 cttctctgtcctaatcaattcaatcaaatcctggattacagtgttcgtgatctctggaat 33219043

                                         
Query: 545      tcctttctcaaagaagtacagatac 569
                ||||||||| |||||||||| ||||
Sbjct: 33219042 tcctttctcgaagaagtacaaatac 33219018



 Score =  103 bits (52), Expect = 7e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                            
Query: 567      tacttgttcaaaatttcaataaatagaatgacagatccgctgcttccctttgatacatta 626
                ||||||||||||||||| ||||||||   |||||||||||| |||||| ||| |||||||
Sbjct: 33218938 tacttgttcaaaatttcgataaatagcgcgacagatccgctacttccccttgttacatta 33218879

                                            
Query: 627      gccatttgttgagcagcatttgcaattc 654
                ||||| |||||||| |||||||||||||
Sbjct: 33218878 gccatctgttgagcggcatttgcaattc 33218851



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 79/92 (85%), Gaps = 2/92 (2%)
 Strand = Plus / Minus

                                                                            
Query: 43       aagaaaaaggaattacaacaatggcactccggtacacaagtatc-ctgtacagacctgag 101
                |||||||||||  ||||||||||  |||| |||||||||||  | ||||||||| |||||
Sbjct: 33219518 aagaaaaaggatatacaacaatgatactctggtacacaagttgcgctgtacagatctgag 33219459

                                                
Query: 102      cttcccaaagagtacagcttattaccacctga 133
                |||||| ||| ||| |||||||| ||||||||
Sbjct: 33219458 cttccc-aagggtaaagcttattgccacctga 33219428
to top
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete
              sequence
          Length = 144487

 Score =  184 bits (93), Expect = 2e-43
 Identities = 177/205 (86%)
 Strand = Plus / Plus

                                                                          
Query: 365    ttttatctgttcatacttttctcctatgcttccacctttctgcttctggaattcgatgta 424
              |||||| || ||||| ||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 115843 ttttatttgctcatatttttcacctatgctcccacctttctgcttctggaattcaatgta 115902

                                                                          
Query: 425    tcgtagagtgcttgcaaagaaagcttcggcagatggatcagatgcactgctgtcattttg 484
               |||| ||||||||||||||| || || |  |||||||||| | || || | ||| ||||
Sbjct: 115903 acgtaaagtgcttgcaaagaaggcctctgtcgatggatcagctacagtgttctcactttg 115962

                                                                          
Query: 485    cttctctgtcctgatcagttcgatcaaatcttggatgacagtgttcgtgatttgtggaat 544
              |||||||||||| |||| ||| |||||||| ||||| |||||||||||||| | ||||||
Sbjct: 115963 cttctctgtcctaatcaattcaatcaaatcctggattacagtgttcgtgatctctggaat 116022

                                       
Query: 545    tcctttctcaaagaagtacagatac 569
              ||||||||| |||||||||| ||||
Sbjct: 116023 tcctttctcgaagaagtacaaatac 116047



 Score =  103 bits (52), Expect = 7e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                          
Query: 567    tacttgttcaaaatttcaataaatagaatgacagatccgctgcttccctttgatacatta 626
              ||||||||||||||||| ||||||||   |||||||||||| |||||| ||| |||||||
Sbjct: 116127 tacttgttcaaaatttcgataaatagcgcgacagatccgctacttccccttgttacatta 116186

                                          
Query: 627    gccatttgttgagcagcatttgcaattc 654
              ||||| |||||||| |||||||||||||
Sbjct: 116187 gccatctgttgagcggcatttgcaattc 116214



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 79/92 (85%), Gaps = 2/92 (2%)
 Strand = Plus / Plus

                                                                          
Query: 43     aagaaaaaggaattacaacaatggcactccggtacacaagtatc-ctgtacagacctgag 101
              |||||||||||  ||||||||||  |||| |||||||||||  | ||||||||| |||||
Sbjct: 115547 aagaaaaaggatatacaacaatgatactctggtacacaagttgcgctgtacagatctgag 115606

                                              
Query: 102    cttcccaaagagtacagcttattaccacctga 133
              |||||| ||| ||| |||||||| ||||||||
Sbjct: 115607 cttccc-aagggtaaagcttattgccacctga 115637
to top
>gb|AY389644.1| Hyacinthus orientalis vacuolar protein sorting-associated protein
           mRNA, partial cds
          Length = 709

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                       
Query: 396 ccacctttctgcttctggaattcgatgtatcgtagagtgcttgcaaagaaagcttcggca 455
           ||||| || ||||||||||| | |||||||| ||||||||| ||||||||||| || |||
Sbjct: 205 ccacccttttgcttctggaaatggatgtatcttagagtgctagcaaagaaagcgtctgca 146

                      
Query: 456 gatggatcaga 466
           |||||||||||
Sbjct: 145 gatggatcaga 135



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 544 ttcctttctcaaagaagtacagatacttgttcaaaatttcaa 585
           ||||||| |||||||||||||| ||||| ||| | |||||||
Sbjct: 56  ttcctttttcaaagaagtacaggtacttattcgatatttcaa 15
to top
>ref|NM_106235.3| Arabidopsis thaliana unknown protein AT1G75850 mRNA, complete cds
          Length = 2727

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                        
Query: 531  gtgatttgtggaattcctttctcaaagaagtacagatacttgttcaaaatttcaataaat 590
            ||||| |||||| | ||||||||||||||||| |  ||||||||||| ||||||| ||| 
Sbjct: 2313 gtgatatgtggattccctttctcaaagaagtaaatgtacttgttcaagatttcaacaaac 2254

                                                              
Query: 591  agaatgacagatccgctgcttccctttgatacattagccatttgttgagc 640
            ||  |||| | ||||||||| ||  | | | || ||||||||||||||||
Sbjct: 2253 agcgtgactggtccgctgctacctctggttgcactagccatttgttgagc 2204
to top
>emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1, COMPLETE SEQUENCE
          Length = 116729

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                         
Query: 567   tacttgttcaaaatttcaataaatagaatgacagatccgctgcttccctttgatacatta 626
             |||||||||||||| ||||| || || || || |||||| |||| ||   || | |||| 
Sbjct: 53823 tacttgttcaaaatctcaatgaagagcattactgatccggtgctacctcgtgctgcattt 53882

                                       
Query: 627   gccatttgttgagcagcatttgcaat 652
             ||||||||||| ||||||||||||||
Sbjct: 53883 gccatttgttgtgcagcatttgcaat 53908
to top
>gb|AC167715.2| Mus musculus chromosome 5, clone wi1-475E8, complete sequence
          Length = 37584

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 41    agaagaaaaaggaattacaacaatgg 66
             |||||| |||||||||||||||||||
Sbjct: 18878 agaagagaaaggaattacaacaatgg 18903
to top
>emb|AJ719889.1| Gallus gallus mRNA for hypothetical protein, clone 7n24
          Length = 1342

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 573  ttcaaaatttcaataaatagaatgac 598
            ||||||| ||||||||||||||||||
Sbjct: 1175 ttcaaaacttcaataaatagaatgac 1150
to top
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence
          Length = 116601

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 620   tacattagccatttgttgagcagcatttgc 649
             |||||| |||||||| ||||||||||||||
Sbjct: 11671 tacattggccatttgctgagcagcatttgc 11642
to top
>gb|AC171013.3| Gallus gallus BAC clone CH261-71N5 from chromosome ul, complete
             sequence
          Length = 196838

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 573   ttcaaaatttcaataaatagaatgac 598
             ||||||| ||||||||||||||||||
Sbjct: 47859 ttcaaaacttcaataaatagaatgac 47834
to top
>ref|NM_114990.2| Arabidopsis thaliana unknown protein AT3G51310 mRNA, complete cds
          Length = 2463

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 544  ttcctttctcaaagaagtacagatacttgttca 576
            |||||||||| | |||||| |||||||||||||
Sbjct: 2164 ttcctttctccaggaagtagagatacttgttca 2132
to top
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 201     tcagaaaccacaaactttgca 221
               |||||||||||||||||||||
Sbjct: 2404555 tcagaaaccacaaactttgca 2404535
to top
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 35      aatactagaagaaaaaggaat 55
               |||||||||||||||||||||
Sbjct: 1043537 aatactagaagaaaaaggaat 1043517
to top
>gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, complete sequence
          Length = 170033

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    aaatactagaagaaaaaggaa 54
             |||||||||||||||||||||
Sbjct: 64998 aaatactagaagaaaaaggaa 65018
to top
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 38      actagaagaaaaaggaattacaaca 62
               |||||||||||||||||||| ||||
Sbjct: 4137697 actagaagaaaaaggaattaaaaca 4137721
to top
>emb|BX825234.1|CNS0A66M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL21ZG11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 992

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 544 ttcctttctcaaagaagtacagatacttgttca 576
           |||||||||| | |||||| |||||||||||||
Sbjct: 662 ttcctttctccaggaagtagagatacttgttca 630
to top
>gb|AC153773.3| Loxodonta africana clone VMRC15-519D8, complete sequence
          Length = 86658

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 575   caaaatttcaataaatagaat 595
             |||||||||||||||||||||
Sbjct: 55643 caaaatttcaataaatagaat 55623
to top
>gb|AC002531.1|AC002531 Homo sapiens chromosome Y, clone 486_O_8, complete sequence
          Length = 197900

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 93     agacctgagcttcccaaagag 113
              |||||||||||||||||||||
Sbjct: 183590 agacctgagcttcccaaagag 183570
to top
>dbj|AB084905.1| Paralichthys olivaceus mRNA for perforin, complete cds
          Length = 2177

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 100 agcttcccaaagagtacagct 120
           |||||||||||||||||||||
Sbjct: 688 agcttcccaaagagtacagct 708
to top
>gb|AC004474.1|AC004474 Homo sapiens chromosome Y, clone 475I1, complete sequence
          Length = 148280

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    agacctgagcttcccaaagag 113
             |||||||||||||||||||||
Sbjct: 29884 agacctgagcttcccaaagag 29864
to top
>dbj|AP001998.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-367C21, complete
             sequence
          Length = 161529

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 362   agcttttatctgttcatactt 382
             |||||||||||||||||||||
Sbjct: 90000 agcttttatctgttcatactt 90020
to top
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 38      actagaagaaaaaggaattacaaca 62
               |||||||||||||||||||| ||||
Sbjct: 4080002 actagaagaaaaaggaattaaaaca 4080026
to top
>dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45A23, TM0318,
              complete sequence
          Length = 117676

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 549    ttctcaaagaagtacagatac 569
              |||||||||||||||||||||
Sbjct: 105435 ttctcaaagaagtacagatac 105415
to top
>gb|AC117825.9| Mus musculus chromosome 18, clone RP24-80J4, complete sequence
          Length = 198559

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    ctgccagccaaaatggaaac 325
              ||||||||||||||||||||
Sbjct: 141737 ctgccagccaaaatggaaac 141756
to top
>gb|AC113053.21| Mus musculus chromosome 17, clone RP23-250J2, complete sequence
          Length = 234124

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     agaagaaaaaggaattacaa 60
              ||||||||||||||||||||
Sbjct: 178679 agaagaaaaaggaattacaa 178698
to top
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0015A05, complete sequence
          Length = 127330

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 292   ggcttgctttctctctgccagcca 315
             |||||||| |||||||||||||||
Sbjct: 41020 ggcttgctgtctctctgccagcca 40997
to top
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0077J22, complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 292  ggcttgctttctctctgccagcca 315
            |||||||| |||||||||||||||
Sbjct: 2654 ggcttgctgtctctctgccagcca 2631
to top
>ref|XM_581035.2| PREDICTED: Bos taurus similar to CG15021-PA, transcript variant 1
            (LOC504853), mRNA
          Length = 3422

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 169  agggtggacatgcaccgatttgag 192
            ||||||||||||||| ||||||||
Sbjct: 3290 agggtggacatgcacggatttgag 3313
to top
>gb|AC120164.7| Mus musculus chromosome 19, clone RP24-470C3, complete sequence
          Length = 164107

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 143   gtaagtaacccaaacattgtagct 166
             ||||||||||||| ||||||||||
Sbjct: 59126 gtaagtaacccaatcattgtagct 59103
to top
>gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, complete sequence
          Length = 170606

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   tgttcaaaatttcaataaat 590
             ||||||||||||||||||||
Sbjct: 43552 tgttcaaaatttcaataaat 43533
to top
>gb|U39651.1| Caenorhabditis elegans cosmid ZK470, complete sequence
          Length = 43695

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   tacttgttcaaaatttcaat 586
             ||||||||||||||||||||
Sbjct: 14714 tacttgttcaaaatttcaat 14695
to top
>gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome 18, complete sequence
          Length = 195082

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 483   tgcttctctgtcctgatcag 502
             ||||||||||||||||||||
Sbjct: 48280 tgcttctctgtcctgatcag 48261
to top
>ref|XM_445920.1| Candida glabrata CBS138, CAGL0E05324g partial mRNA
          Length = 3855

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 542  aattcctttctcaaagaagt 561
            ||||||||||||||||||||
Sbjct: 1821 aattcctttctcaaagaagt 1802
to top
>gb|AC135356.2| Mus musculus BAC clone RP24-545J19 from chromosome 17, complete sequence
          Length = 186773

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     aatactagaagaaaaaggaa 54
              ||||||||||||||||||||
Sbjct: 115365 aatactagaagaaaaaggaa 115384
to top
>gb|AC132221.3| Mus musculus BAC clone RP24-545C12 from chromosome 12, complete
             sequence
          Length = 198084

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   tgttcaaaatttcaataaat 590
             ||||||||||||||||||||
Sbjct: 55968 tgttcaaaatttcaataaat 55987
to top
>gb|AC116463.9| Mus musculus chromosome 17, clone RP23-30P1, complete sequence
          Length = 237187

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     agaagaaaaaggaattacaa 60
              ||||||||||||||||||||
Sbjct: 199432 agaagaaaaaggaattacaa 199413
to top
>gb|AC122842.3| Mus musculus BAC clone RP23-148K14 from 1, complete sequence
          Length = 209506

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 292    ggcttgctttctctctgccagcca 315
              |||||||||||||| |||||||||
Sbjct: 109543 ggcttgctttctctgtgccagcca 109566
to top
>gb|AC103930.10| Mus musculus chromosome 5, clone RP23-238D18, complete sequence
          Length = 203246

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   acaaactttgcaaacatttt 229
             ||||||||||||||||||||
Sbjct: 65186 acaaactttgcaaacatttt 65167
to top
>gb|AC025047.17| Mus musculus chromosome 1, clone RP23-56I8, complete sequence
          Length = 220713

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 292    ggcttgctttctctctgccagcca 315
              |||||||||||||| |||||||||
Sbjct: 181248 ggcttgctttctctgtgccagcca 181225
to top
>emb|AL732372.15| Human DNA sequence from clone RP4-669L17 on chromosome 1 Contains five
             novel genes, two novel pseudogenes and the gene for a
             novel protein similar to the olfactory receptor family,
             complete sequence
          Length = 153649

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 40911 aaaatactagaagaaaaagg 40892
to top
>emb|AL353654.29| Human DNA sequence from clone RP1-24O22 on chromosome 6 Contains an
             olfactory receptor pseudogene, a gene for a novel protein
             similar to septin and a novel pseudogene, complete
             sequence
          Length = 86701

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 55880 aaaatactagaagaaaaagg 55899
to top
>emb|AL031259.1|HS191N21 Human DNA sequence from clone RP1-191N21 on chromosome 6q27 Contains a
             7 transmembrane receptor (rhodopsin family) (olfactory
             receptor like) pseudogene, the PDCD2 gene for programmed
             cell death 2 (RP8 homolog), the TBP gene for TATA box
             binding protein, the PSMB1 gene for proteasome subunit HC5
             and two CpG islands, complete sequence
          Length = 113820

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 18371 aaaatactagaagaaaaagg 18390
to top
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence
          Length = 687501

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 542    aattcctttctcaaagaagt 561
              ||||||||||||||||||||
Sbjct: 519260 aattcctttctcaaagaagt 519279
to top
>emb|CR938745.1| Human DNA sequence from clone XX-HCC1954_32J13, complete sequence
          Length = 164033

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     aatactagaagaaaaaggaa 54
              ||||||||||||||||||||
Sbjct: 152088 aatactagaagaaaaaggaa 152069
to top
>emb|CR786561.14| Zebrafish DNA sequence from clone CH211-233K18 in linkage group 13,
             complete sequence
          Length = 84641

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   tgccctacttgtctcgagtt 357
             ||||||||||||||||||||
Sbjct: 16916 tgccctacttgtctcgagtt 16935
to top
>gb|AC090844.7| Homo sapiens chromosome 17, clone RP11-387H17, complete sequence
          Length = 227857

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     aatactagaagaaaaaggaa 54
              ||||||||||||||||||||
Sbjct: 194505 aatactagaagaaaaaggaa 194486
to top
>gb|AC129907.3| Homo sapiens chromosome 15, clone CTD-2280M1, complete sequence
          Length = 127340

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 34140 aaaatactagaagaaaaagg 34121
to top
>gb|AC069307.7| Homo sapiens BAC clone RP11-738E22 from 4, complete sequence
          Length = 203474

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 95590 aaaatactagaagaaaaagg 95571
to top
>dbj|AK139683.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
            clone:B020010K11 product:unclassifiable, full insert
            sequence
          Length = 3581

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  ctgccagccaaaatggaaac 325
            ||||||||||||||||||||
Sbjct: 3326 ctgccagccaaaatggaaac 3345
to top
>gb|AC157548.7| Mus musculus chromosome 18, clone RP24-310H1, complete sequence
          Length = 177509

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   ctgccagccaaaatggaaac 325
             ||||||||||||||||||||
Sbjct: 85948 ctgccagccaaaatggaaac 85929
to top
>gb|AC140725.3| Homo sapiens chromosome 15, clone, complete sequence
          Length = 181240

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     aaaatactagaagaaaaagg 52
              ||||||||||||||||||||
Sbjct: 114263 aaaatactagaagaaaaagg 114282
to top
>gb|AC092192.1|AC092192 Homo sapiens chromosome 19 clone LLNLF-127D1, complete sequence
          Length = 39041

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 27073 aaaatactagaagaaaaagg 27092
to top
>ref|NM_076305.4| Caenorhabditis elegans NCK (Non-Catalytic region of tyrosine Kinase)
            adaptor protein family member (nck-1) (nck-1) mRNA,
            complete cds
          Length = 1347

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 567  tacttgttcaaaatttcaat 586
            ||||||||||||||||||||
Sbjct: 1215 tacttgttcaaaatttcaat 1234
to top
>ref|NM_076306.3| Caenorhabditis elegans NCK (Non-Catalytic region of tyrosine Kinase)
            adaptor protein family member (nck-1) (nck-1) mRNA,
            complete cds
          Length = 1630

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 567  tacttgttcaaaatttcaat 586
            ||||||||||||||||||||
Sbjct: 1224 tacttgttcaaaatttcaat 1243
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 292     ggcttgctttctctctgccagcca 315
               |||||||| |||||||||||||||
Sbjct: 2556134 ggcttgctgtctctctgccagcca 2556111
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 203      agaaaccacaaactttgcaaacat 226
                |||| |||||||||||||||||||
Sbjct: 18756877 agaacccacaaactttgcaaacat 18756900
to top
>gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, complete sequence
          Length = 199487

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     aaaatactagaagaaaaagg 52
              ||||||||||||||||||||
Sbjct: 162558 aaaatactagaagaaaaagg 162539
to top
>gb|AC139237.2| Homo sapiens chromosome 5 clone XXcos-B22C68, complete sequence
          Length = 28607

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   aaaatactagaagaaaaagg 52
            ||||||||||||||||||||
Sbjct: 2184 aaaatactagaagaaaaagg 2165
to top
>gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, complete sequence
          Length = 150642

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 82704 aaaatactagaagaaaaagg 82723
to top
>gb|AC107977.13| Homo sapiens chromosome 15, clone CTD-2611K5, complete sequence
          Length = 152619

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 26937 aaaatactagaagaaaaagg 26956
to top
>gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, complete sequence
          Length = 120139

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 40905 aaaatactagaagaaaaagg 40886
to top
>gb|AF276881.1|AF276881 Homo sapiens clone 15qtel_ctg0223_c140at7 sequence
          Length = 628

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 33  aaaatactagaagaaaaagg 52
           ||||||||||||||||||||
Sbjct: 222 aaaatactagaagaaaaagg 203
to top
>gb|AC138030.1| Homo sapiens chromosome 5 clone XXcos-B22C100, complete sequence
          Length = 44419

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 30057 aaaatactagaagaaaaagg 30038
to top
>gb|AC114498.2| Homo sapiens chromosome 1 clone RP5-857K21, complete sequence
          Length = 121664

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     aaaatactagaagaaaaagg 52
              ||||||||||||||||||||
Sbjct: 109690 aaaatactagaagaaaaagg 109709
to top
>gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana BAC T4O12 from chromosome I,
             complete sequence
          Length = 95870

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 531   gtgatttgtggaattcctttctcaaagaagta 562
             ||||| |||||| | |||||||||||||||||
Sbjct: 27296 gtgatatgtggattccctttctcaaagaagta 27327
to top
>dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1249E06
          Length = 126534

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 203   agaaaccacaaactttgcaaacat 226
             |||| |||||||||||||||||||
Sbjct: 78394 agaacccacaaactttgcaaacat 78417
to top
>gb|AC004842.2|AC004842 Homo sapiens PAC clone RP4-609N19 from 7p22, complete sequence
          Length = 120000

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 86716 aaaatactagaagaaaaagg 86697
to top
>gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, complete sequence
          Length = 138251

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 52767 aaaatactagaagaaaaagg 52786
to top
>gb|AC136371.4| Mus musculus chromosome 1, clone RP23-405G16, complete sequence
          Length = 225976

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 292    ggcttgctttctctctgccagcca 315
              |||||||||||||| |||||||||
Sbjct: 184568 ggcttgctttctctgtgccagcca 184591
to top
>ref|NR_002886.1| Mus musculus tubulin, alpha 2 pseudogene (LOC621740) on chromosome 18
          Length = 3581

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  ctgccagccaaaatggaaac 325
            ||||||||||||||||||||
Sbjct: 3326 ctgccagccaaaatggaaac 3345
to top
>emb|AL929284.12| Zebrafish DNA sequence from clone CH211-160H23 in linkage group 15,
              complete sequence
          Length = 179458

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 582    tcaataaatagaatgacagatccg 605
              |||||| |||||||||||||||||
Sbjct: 127805 tcaatagatagaatgacagatccg 127828
to top
>emb|AJ877905.1| Human immunodeficiency virus type 1 subtype A proviral partial
           gp120 gene for envelope glycoprotein gp120, isolate
           97DC.KS13 1997
          Length = 611

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  ggaattacaacaatggcact 70
           ||||||||||||||||||||
Sbjct: 362 ggaattacaacaatggcact 381
to top
>emb|AL929347.8| Human DNA sequence from clone RP3-433O3 on chromosome 22, complete
             sequence
          Length = 128374

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aaaatactagaagaaaaagg 52
             ||||||||||||||||||||
Sbjct: 41747 aaaatactagaagaaaaagg 41766


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,014,898
Number of Sequences: 3902068
Number of extensions: 7014898
Number of successful extensions: 140441
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139888
Number of HSP's gapped (non-prelim): 539
length of query: 658
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 635
effective length of database: 17,143,297,704
effective search space: 10885994042040
effective search space used: 10885994042040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top