ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25d10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue 636 e-179
2gb|AY103537.1| Zea mays PCO098403 mRNA sequence 430 e-117
3gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence 426 e-116
4gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence 426 e-116
5gb|BT016887.1| Zea mays clone Contig720 mRNA sequence 422 e-115
6gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence 422 e-115
7dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
8dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
9dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 373 e-100
10dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 9... 373 e-100
11gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic ... 216 6e-53
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 216 6e-53
13dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic D... 216 6e-53
14dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 216 6e-53
15gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds 74 6e-10
16ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP bindin... 66 1e-07
17ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP bindin... 66 1e-07
18emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BA... 66 1e-07
19emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BA... 66 1e-07
20emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, ... 66 1e-07
21gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, com... 66 1e-07
22gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, com... 66 1e-07
23dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, comp... 66 1e-07
24gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC ... 66 1e-07
25dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, comp... 66 1e-07
26gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete seq... 62 2e-06
27gb|DQ084238.1| Leishmania donovani chagasi clone LCPE01EX020024H... 50 0.008
28gb|DQ084237.1| Leishmania donovani chagasi clone LCPE01EX020050A... 50 0.008
29emb|X87770.2|LIHSP83GN Leishmania infantum hsp83-1 gene for heat... 50 0.008
30gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 48 0.033
31gb|AY103538.1| Zea mays PCO150589 mRNA sequence 48 0.033
32gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta... 46 0.13
33gb|AF384808.1| Cryptococcus neoformans var. grubii heat-shock pr... 44 0.51
34gb|AY118578.1| Drosophila melanogaster LD43460 full insert cDNA 44 0.51
35dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 44 0.51
36ref|NM_058091.3| Drosophila melanogaster Trap1 CG3152-RA (Trap1)... 44 0.51
37gb|AY122624.1| Dimastigella trypaniformis strain Ulm heat shock ... 44 0.51
38gb|AF115775.2|AF115775 Drosophila melanogaster Hsp90-related pro... 44 0.51
39gb|BT001316.1| Drosophila melanogaster AT15050 full insert cDNA 44 0.51
40gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 44 0.51
41gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence 42 2.0
42gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 42 2.0
43emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, stra... 42 2.0
44gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cance... 42 2.0
45ref|NR_002839.1| Mus musculus distal-less homeobox 6, antisense ... 42 2.0
46ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 ... 42 2.0
47gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, comple... 42 2.0
48gb|AY109427.1| Zea mays CL1264_2 mRNA sequence 42 2.0
49emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8,... 42 2.0
50gb|AF022079.1|AF022079 Mus musculus antisense Dlx-6 mRNA, partia... 42 2.0
51gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complet... 42 2.0
52gb|M60499.1|HUMPROFILC Human profilaggrin mRNA, 5' end 42 2.0
53gb|M73492.1|LEIHSP90 Leishmania donovani heat shock protein 90 m... 42 2.0
54gb|M92926.1|LEIHSP01 Leishmania amazonensis heat shock protein 8... 42 2.0
55gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 40 7.9
56gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 7.9
57ref|XM_598073.2| PREDICTED: Bos taurus similar to SLIT-ROBO Rho ... 40 7.9
58emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chr... 40 7.9
59gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Par... 40 7.9
60gb|AY942619.1| Leishmania braziliensis strain MHOM/PE/95/LQ2 hea... 40 7.9
61gb|AC079467.2|AC079467 Homo sapiens chromosome 5 clone RP11-357D... 40 7.9
62gb|AC146881.3| Otolemur garnettii clone CH256-571D18, complete s... 40 7.9
63gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, comple... 40 7.9
64gb|AF247812.1|AF247812 Rattus norvegicus transcription factor FK... 40 7.9
65dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.9
66ref|XM_342244.2| PREDICTED: Rattus norvegicus forkhead box O1A (... 40 7.9
67dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
68dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
69gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequ... 40 7.9
70emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 i... 40 7.9
71gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRN... 40 7.9
72dbj|AP000785.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.9
73gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 7.9
74dbj|D86216.1| Thermus aquaticus DNA for trehalose synthase, comp... 40 7.9

>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue
          Length = 2682

 Score =  636 bits (321), Expect = e-179
 Identities = 334/337 (99%), Gaps = 1/337 (0%)
 Strand = Plus / Minus

                                                                        
Query: 248  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2371 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 2312

                                                                        
Query: 308  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2311 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 2252

                                                                        
Query: 368  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2251 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 2192

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2191 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 2132

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 2131 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccatcca 2072

                                                 
Query: 548  tactttggaggtgaccaccacacagggggtgttgtgc 584
            ||| |||||||||||||||||||||||||||||||||
Sbjct: 2071 tac-ttggaggtgaccaccacacagggggtgttgtgc 2036



 Score =  385 bits (194), Expect = e-103
 Identities = 201/202 (99%), Gaps = 1/202 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttacacggacaaaaccccccgtat-acgatcgatgattaatcgtcttccgcgcggtaaaa 59
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2619 ttacacggacaaaaccccccgtatcacgatcgatgattaatcgtcttccgcgcggtaaaa 2560

                                                                        
Query: 60   atggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatgaaa 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2559 atggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatgaaa 2500

                                                                        
Query: 120  gctaaatgggcgatatgagcaactacagctcgtccttgtcgtactgctcgtgttccggct 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2499 gctaaatgggcgatatgagcaactacagctcgtccttgtcgtactgctcgtgttccggct 2440

                                  
Query: 180  cctccgcctcctgcttggccga 201
            ||||||||||||||||||||||
Sbjct: 2439 cctccgcctcctgcttggccga 2418



to top

>gb|AY103537.1| Zea mays PCO098403 mRNA sequence
          Length = 2806

 Score =  430 bits (217), Expect = e-117
 Identities = 308/337 (91%), Gaps = 1/337 (0%)
 Strand = Plus / Minus

                                                                        
Query: 248  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
            ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 2402 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2343

                                                                        
Query: 308  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
            || ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2342 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 2283

                                                                        
Query: 368  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 427
            |||||||||||||||||  ||||||| ||  |||||||||||||||||||||||||||||
Sbjct: 2282 ctcgccgtctgcttcagctcctcgctctcattgtcctgggcgaccttgtcgcggagctcc 2223

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2222 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 2163

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||||||| ||||||||||||||| |||||||||||||||||||||||||  || || || 
Sbjct: 2162 ttgctcgagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccg 2103

                                                 
Query: 548  tactttggaggtgaccaccacacagggggtgttgtgc 584
            ||| ||||||||||| || || |||||||||| ||||
Sbjct: 2102 tac-ttggaggtgacgacgacgcagggggtgtcgtgc 2067



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  actacagctcgtccttgtcg 160
            ||||||||||||||||||||
Sbjct: 2503 actacagctcgtccttgtcg 2484



to top

>gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence
          Length = 1546

 Score =  426 bits (215), Expect = e-116
 Identities = 303/331 (91%), Gaps = 1/331 (0%)
 Strand = Plus / Minus

                                                                        
Query: 254  gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 313
            |||||||||||||||||||||| |||||||||||||  ||||||||| ||||| || |||
Sbjct: 1240 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1181

                                                                        
Query: 314  ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 373
            |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1180 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1121

                                                                        
Query: 374  gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 433
            || ||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 1120 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1061

                                                                        
Query: 434  atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 493
            |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1060 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 1001

                                                                        
Query: 494  gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatccatacttt 553
            | ||||||||||||||| |||||||||||||||||||||||||  || || || ||| ||
Sbjct: 1000 gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtac-tt 942

                                           
Query: 554  ggaggtgaccaccacacagggggtgttgtgc 584
            |||||||||||| || |||||||||| ||||
Sbjct: 941  ggaggtgaccacgacgcagggggtgtcgtgc 911



to top

>gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence
          Length = 1544

 Score =  426 bits (215), Expect = e-116
 Identities = 303/331 (91%), Gaps = 1/331 (0%)
 Strand = Plus / Minus

                                                                        
Query: 254  gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 313
            |||||||||||||||||||||| |||||||||||||  ||||||||| ||||| || |||
Sbjct: 1226 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1167

                                                                        
Query: 314  ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 373
            |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1166 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1107

                                                                        
Query: 374  gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 433
            || ||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 1106 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1047

                                                                        
Query: 434  atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 493
            |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1046 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 987

                                                                        
Query: 494  gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatccatacttt 553
            | ||||||||||||||| |||||||||||||||||||||||||  || || || ||| ||
Sbjct: 986  gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtac-tt 928

                                           
Query: 554  ggaggtgaccaccacacagggggtgttgtgc 584
            |||||||||||| || |||||||||| ||||
Sbjct: 927  ggaggtgaccacgacgcagggggtgtcgtgc 897



to top

>gb|BT016887.1| Zea mays clone Contig720 mRNA sequence
          Length = 719

 Score =  422 bits (213), Expect = e-115
 Identities = 270/289 (93%)
 Strand = Plus / Plus

                                                                       
Query: 248 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
           ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 339 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 398

                                                                       
Query: 308 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
           || ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 399 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 458

                                                                       
Query: 368 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 427
           |||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 459 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 518

                                                                       
Query: 428 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
           |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 519 ttgatgatggggtgcctggggttgatctccaccaccctcttgccgcgcatgtacgcctgc 578

                                                            
Query: 488 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttgg 536
           ||||||| ||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 579 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttgg 627



to top

>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence
          Length = 2511

 Score =  422 bits (213), Expect = e-115
 Identities = 270/289 (93%)
 Strand = Plus / Minus

                                                                        
Query: 248  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
            ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 2172 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2113

                                                                        
Query: 308  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
            || ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 2112 aactccttggggtcggggagggtgaacccgctctccatcagggccgtctggtacaccagc 2053

                                                                        
Query: 368  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 427
            |||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2052 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 1993

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1992 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 1933

                                                             
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttgg 536
            ||||||| ||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 1932 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttgg 1884



to top

>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full
            insert sequence
          Length = 2708

 Score =  381 bits (192), Expect = e-102
 Identities = 298/332 (89%), Gaps = 1/332 (0%)
 Strand = Plus / Minus

                                                                        
Query: 248  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 2416 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 2357

                                                                        
Query: 308  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 2356 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 2297

                                                                        
Query: 368  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 427
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 2296 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2237

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 2236 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2177

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||||| || ||||| |||||||||| |||||||||||||||||||||||  || || || 
Sbjct: 2176 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2117

                                            
Query: 548  tactttggaggtgaccaccacacagggggtgt 579
            ||| ||||| || |||||||| ||||||||||
Sbjct: 2116 tac-ttggatgtcaccaccacgcagggggtgt 2086



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 56   aaaaatggacgtccctcaaaaccatcacattt 87
            ||||||||||||||||| ||||||||||||||
Sbjct: 2608 aaaaatggacgtccctcgaaaccatcacattt 2577



to top

>dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G02, full
            insert sequence
          Length = 2026

 Score =  381 bits (192), Expect = e-102
 Identities = 298/332 (89%), Gaps = 1/332 (0%)
 Strand = Plus / Minus

                                                                        
Query: 248  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 1738 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1679

                                                                        
Query: 308  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1678 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1619

                                                                        
Query: 368  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 427
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1618 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1559

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1558 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1499

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||||| || ||||| |||||||||| |||||||||||||||||||||||  || || || 
Sbjct: 1498 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 1439

                                            
Query: 548  tactttggaggtgaccaccacacagggggtgt 579
            ||| ||||| || |||||||| ||||||||||
Sbjct: 1438 tac-ttggatgtcaccaccacgcagggggtgt 1408



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 56   aaaaatggacgtccctcaaaaccatcacattt 87
            ||||||||||||||||| ||||||||||||||
Sbjct: 1930 aaaaatggacgtccctcgaaaccatcacattt 1899



to top

>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full
            insert sequence
          Length = 1944

 Score =  373 bits (188), Expect = e-100
 Identities = 297/332 (89%), Gaps = 1/332 (0%)
 Strand = Plus / Minus

                                                                        
Query: 248  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 1656 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1597

                                                                        
Query: 308  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1596 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1537

                                                                        
Query: 368  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 427
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1536 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1477

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1476 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1417

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||||| || ||||| |||||||||| |||||||||||||||| ||||||  || || || 
Sbjct: 1416 ttgctggcatccgagagggtctgtgactgcatgatcttctccgtgttggcgctccacccg 1357

                                            
Query: 548  tactttggaggtgaccaccacacagggggtgt 579
            ||| ||||| || |||||||| ||||||||||
Sbjct: 1356 tac-ttggatgtcaccaccacgcagggggtgt 1326



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 56   aaaaatggacgtccctcaaaaccatcacattt 87
            ||||||||||||||||| ||||||||||||||
Sbjct: 1848 aaaaatggacgtccctcgaaaccatcacattt 1817



to top

>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds
          Length = 2731

 Score =  373 bits (188), Expect = e-100
 Identities = 297/332 (89%), Gaps = 1/332 (0%)
 Strand = Plus / Minus

                                                                        
Query: 248  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
            ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||  | || 
Sbjct: 2410 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctgaaggcg 2351

                                                                        
Query: 308  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 2350 aagtccttgggatcagggaggttgaagccgctctccatgagggccgtctggtacaccagc 2291

                                                                        
Query: 368  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 427
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 2290 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2231

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 2230 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2171

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||||| || ||||| |||||||||| |||||||||||||||||||||||  || || || 
Sbjct: 2170 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2111

                                            
Query: 548  tactttggaggtgaccaccacacagggggtgt 579
            ||| ||||| || |||||||| ||||||||||
Sbjct: 2110 tac-ttggatgtcaccaccacgcagggggtgt 2080



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 56   aaaaatggacgtccctcaaaaccatcacattt 87
            ||||||||||||||||| ||||||||||||||
Sbjct: 2602 aaaaatggacgtccctcgaaaccatcacattt 2571



to top

>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete
             sequence
          Length = 143507

 Score =  216 bits (109), Expect = 6e-53
 Identities = 167/185 (90%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                         
Query: 395   tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 454
             ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 9854  tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 9913

                                                                         
Query: 455   tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 514
             || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 9914  tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 9973

                                                                         
Query: 515   tgcatgatcttctccatgttggaacttcatccatactttggaggtgaccaccacacaggg 574
             ||||||||||||||||||||||  || || || ||| ||||| || |||||||| |||||
Sbjct: 9974  tgcatgatcttctccatgttggcgctccacccgtac-ttggatgtcaccaccacgcaggg 10032

                  
Query: 575   ggtgt 579
             |||||
Sbjct: 10033 ggtgt 10037



 Score =  170 bits (86), Expect = 3e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                        
Query: 248  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 9601 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 9660

                                                                        
Query: 308  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 9661 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 9720

                                      
Query: 368  ctcgccgtctgcttcaggccctcgct 393
             ||||||||||||||| || ||||||
Sbjct: 9721 ttcgccgtctgcttcaagctctcgct 9746



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 56   aaaaatggacgtccctcaaaaccatcacattt 87
            ||||||||||||||||| ||||||||||||||
Sbjct: 9409 aaaaatggacgtccctcgaaaccatcacattt 9440



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  216 bits (109), Expect = 6e-53
 Identities = 167/185 (90%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                            
Query: 395      tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 454
                ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 29929148 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 29929207

                                                                            
Query: 455      tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 514
                || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 29929208 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 29929267

                                                                            
Query: 515      tgcatgatcttctccatgttggaacttcatccatactttggaggtgaccaccacacaggg 574
                ||||||||||||||||||||||  || || || ||| ||||| || |||||||| |||||
Sbjct: 29929268 tgcatgatcttctccatgttggcgctccacccgtac-ttggatgtcaccaccacgcaggg 29929326

                     
Query: 575      ggtgt 579
                |||||
Sbjct: 29929327 ggtgt 29929331



 Score =  170 bits (86), Expect = 3e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                            
Query: 248      acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
                ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 29928895 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 29928954

                                                                            
Query: 308      aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
                ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 29928955 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 29929014

                                          
Query: 368      ctcgccgtctgcttcaggccctcgct 393
                 ||||||||||||||| || ||||||
Sbjct: 29929015 ttcgccgtctgcttcaagctctcgct 29929040



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 56       aaaaatggacgtccctcaaaaccatcacattt 87
                ||||||||||||||||| ||||||||||||||
Sbjct: 29928703 aaaaatggacgtccctcgaaaccatcacattt 29928734



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 173      tccggctcctccgcctcctgcttggccg 200
                ||||||||||||||||||| ||| ||||
Sbjct: 15914667 tccggctcctccgcctcctccttcgccg 15914694



to top

>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0541C02
          Length = 150660

 Score =  216 bits (109), Expect = 6e-53
 Identities = 167/185 (90%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                        
Query: 395  tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 454
            ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 5296 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 5355

                                                                        
Query: 455  tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 514
            || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 5356 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 5415

                                                                        
Query: 515  tgcatgatcttctccatgttggaacttcatccatactttggaggtgaccaccacacaggg 574
            ||||||||||||||||||||||  || || || ||| ||||| || |||||||| |||||
Sbjct: 5416 tgcatgatcttctccatgttggcgctccacccgtac-ttggatgtcaccaccacgcaggg 5474

                 
Query: 575  ggtgt 579
            |||||
Sbjct: 5475 ggtgt 5479



 Score =  170 bits (86), Expect = 3e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                        
Query: 248  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 5043 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 5102

                                                                        
Query: 308  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 5103 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 5162

                                      
Query: 368  ctcgccgtctgcttcaggccctcgct 393
             ||||||||||||||| || ||||||
Sbjct: 5163 ttcgccgtctgcttcaagctctcgct 5188



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 56   aaaaatggacgtccctcaaaaccatcacattt 87
            ||||||||||||||||| ||||||||||||||
Sbjct: 4851 aaaaatggacgtccctcgaaaccatcacattt 4882



to top

>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0481E08
          Length = 171965

 Score =  216 bits (109), Expect = 6e-53
 Identities = 167/185 (90%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                          
Query: 395    tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 454
              ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 124661 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 124720

                                                                          
Query: 455    tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 514
              || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 124721 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 124780

                                                                          
Query: 515    tgcatgatcttctccatgttggaacttcatccatactttggaggtgaccaccacacaggg 574
              ||||||||||||||||||||||  || || || ||| ||||| || |||||||| |||||
Sbjct: 124781 tgcatgatcttctccatgttggcgctccacccgtac-ttggatgtcaccaccacgcaggg 124839

                   
Query: 575    ggtgt 579
              |||||
Sbjct: 124840 ggtgt 124844



 Score =  170 bits (86), Expect = 3e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                          
Query: 248    acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 307
              ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 124408 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 124467

                                                                          
Query: 308    aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 367
              ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 124468 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 124527

                                        
Query: 368    ctcgccgtctgcttcaggccctcgct 393
               ||||||||||||||| || ||||||
Sbjct: 124528 ttcgccgtctgcttcaagctctcgct 124553



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 56     aaaaatggacgtccctcaaaaccatcacattt 87
              ||||||||||||||||| ||||||||||||||
Sbjct: 124216 aaaaatggacgtccctcgaaaccatcacattt 124247



to top

>gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds
          Length = 2947

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 446  gggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagg 505
            ||||| ||||| || |||||||| ||||||||||| ||||||||||| || || || || 
Sbjct: 2135 gggttaatctcgagcaccctcttcccgcgcatgtatgcctgcttgctggcatcggaaaga 2076

                                         
Query: 506  gtctgtgcctgcatgatcttctccatgtt 534
            ||||| | |||||| ||||||||||||||
Sbjct: 2075 gtctgagactgcataatcttctccatgtt 2047



to top

>ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein
            binding AT4G24190 (SHD) transcript variant AT4G24190.1
            mRNA, complete cds
          Length = 2707

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||| ||||||
Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088

                 
Query: 548  tactt 552
             ||||
Sbjct: 2087 aactt 2083



to top

>ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein
            binding AT4G24190 (SHD) transcript variant AT4G24190.2
            mRNA, complete cds
          Length = 2707

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||| ||||||
Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088

                 
Query: 548  tactt 552
             ||||
Sbjct: 2087 aactt 2083



to top

>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial
             sequence (ESSA project)
          Length = 77567

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                         
Query: 428   ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
             |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 76717 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 76776

                                                                         
Query: 488   ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
             ||  | || ||||| || || || | |||||||||| ||||||| || | ||| ||||||
Sbjct: 76777 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 76836

                  
Query: 548   tactt 552
              ||||
Sbjct: 76837 aactt 76841



to top

>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project)
          Length = 108459

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 3355 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 3414

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||| ||||||
Sbjct: 3415 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 3474

                 
Query: 548  tactt 552
             ||||
Sbjct: 3475 aactt 3479



to top

>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61
          Length = 198402

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                         
Query: 428   ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
             |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 20012 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 20071

                                                                         
Query: 488   ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
             ||  | || ||||| || || || | |||||||||| ||||||| || | ||| ||||||
Sbjct: 20072 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 20131

                  
Query: 548   tactt 552
              ||||
Sbjct: 20132 aactt 20136



to top

>gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, complete cds
          Length = 2702

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2201 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2142

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||| ||||||
Sbjct: 2141 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2082

                 
Query: 548  tactt 552
             ||||
Sbjct: 2081 aactt 2077



to top

>gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, complete cds
          Length = 2472

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2153 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2094

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||| ||||||
Sbjct: 2093 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2034

                 
Query: 548  tactt 552
             ||||
Sbjct: 2033 aactt 2029



to top

>dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, complete cds
          Length = 2674

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2193 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2134

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||| ||||||
Sbjct: 2133 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2074

                 
Query: 548  tactt 552
             ||||
Sbjct: 2073 aactt 2069



to top

>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence,
           complete sequence
          Length = 116156

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                       
Query: 428 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
           |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 851 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 792

                                                                       
Query: 488 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
           ||  | || ||||| || || || | |||||||||| ||||||| || | ||| ||||||
Sbjct: 791 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 732

                
Query: 548 tactt 552
            ||||
Sbjct: 731 aactt 727



to top

>dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, complete cds
          Length = 6679

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 428  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 487
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 5136 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 5077

                                                                        
Query: 488  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaacttcatcca 547
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||| ||||||
Sbjct: 5076 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 5017

                 
Query: 548  tactt 552
             ||||
Sbjct: 5016 aactt 5012



to top

>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence
          Length = 116601

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 419   cggagctccttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatg 478
             ||||| ||||||||||| ||||| |  || |||||||| || ||||||||||||||||||
Sbjct: 80122 cggagttccttgatgatagggtgtctaggattgatctcaagaaccctcttgccgcgcatg 80063

                        
Query: 479   tacgcctgctt 489
             || || |||||
Sbjct: 80062 tatgcttgctt 80052



to top

>gb|DQ084238.1| Leishmania donovani chagasi clone LCPE01EX020024H11.g 83 kDa heat
           shock protein (hsp83) mRNA, partial cds
          Length = 564

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 422 agctccttgatgatggggtgccgggggttgatctcca 458
           |||||||||||||||||||| | |||||||| |||||
Sbjct: 136 agctccttgatgatggggtgtctggggttgagctcca 100



to top

>gb|DQ084237.1| Leishmania donovani chagasi clone LCPE01EX020050A04.g 83 kDa heat
           shock protein (hsp83) mRNA, partial cds
          Length = 597

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 422 agctccttgatgatggggtgccgggggttgatctcca 458
           |||||||||||||||||||| | |||||||| |||||
Sbjct: 513 agctccttgatgatggggtgtctggggttgagctcca 477



to top

>emb|X87770.2|LIHSP83GN Leishmania infantum hsp83-1 gene for heat shock protein 83-1 and
            hsp83-2 gene for heat shock protein 83-2
          Length = 3744

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 422  agctccttgatgatggggtgccgggggttgatctcca 458
            |||||||||||||||||||| | |||||||| |||||
Sbjct: 1914 agctccttgatgatggggtgtctggggttgagctcca 1878



to top

>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 163    ctgctcgtgttccggctcctccgcctcctgct 194
              |||||| ||||||||||||||| |||||||||
Sbjct: 178788 ctgctcctgttccggctcctcctcctcctgct 178819



to top

>gb|AY103538.1| Zea mays PCO150589 mRNA sequence
          Length = 2534

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 489  tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttgg 536
            |||||| ||||  ||||| |||||||| ||||||| ||||||||||||
Sbjct: 1968 tgctcgagtccctcagggcctgtgccttcatgatcctctccatgttgg 1921



to top

>gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta (hsp90 beta) mRNA, complete
            cds
          Length = 2625

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 502  cagggtctgtgcctgcatgatcttctccatgttgg 536
            ||||| |||||||| ||||||| ||||||||||||
Sbjct: 1909 cagggcctgtgccttcatgatcctctccatgttgg 1875



to top

>gb|AF384808.1| Cryptococcus neoformans var. grubii heat-shock protein 90 gene,
            partial cds
          Length = 2391

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 421  gagctccttgatgatggggtgccgggggttgatctcca 458
            |||||||||||||||||||||   |||||||| |||||
Sbjct: 2154 gagctccttgatgatggggtgagaggggttgagctcca 2117



to top

>gb|AY118578.1| Drosophila melanogaster LD43460 full insert cDNA
          Length = 1210

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 422 agctccttgatgatggggtgccgggggttgatctccag 459
           |||| ||||||||||||||||   ||||||||||||||
Sbjct: 910 agcttcttgatgatggggtgctttgggttgatctccag 873



to top

>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 98      atttctttctaatgaaatgaaa 119
               ||||||||||||||||||||||
Sbjct: 1261169 atttctttctaatgaaatgaaa 1261148



to top

>ref|NM_058091.3| Drosophila melanogaster Trap1 CG3152-RA (Trap1), mRNA
          Length = 2478

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 422  agctccttgatgatggggtgccgggggttgatctccag 459
            |||| ||||||||||||||||   ||||||||||||||
Sbjct: 2197 agcttcttgatgatggggtgctttgggttgatctccag 2160



to top

>gb|AY122624.1| Dimastigella trypaniformis strain Ulm heat shock protein 90 (HSP-90)
            gene, partial cds
          Length = 1873

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 422  agctccttgatgatggggtgccgggggttgatctccag 459
            |||||||||||||||| ||| |  ||||||||||||||
Sbjct: 1740 agctccttgatgatggcgtggctcgggttgatctccag 1703



to top

>gb|AF115775.2|AF115775 Drosophila melanogaster Hsp90-related protein TRAP1 mRNA, complete
            cds
          Length = 2162

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 422  agctccttgatgatggggtgccgggggttgatctccag 459
            |||| ||||||||||||||||   ||||||||||||||
Sbjct: 2000 agcttcttgatgatggggtgctttgggttgatctccag 1963



to top

>gb|BT001316.1| Drosophila melanogaster AT15050 full insert cDNA
          Length = 2475

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 422  agctccttgatgatggggtgccgggggttgatctccag 459
            |||| ||||||||||||||||   ||||||||||||||
Sbjct: 2193 agcttcttgatgatggggtgctttgggttgatctccag 2156



to top

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 178     ctcctccgcctcctgcttggcc 199
               ||||||||||||||||||||||
Sbjct: 2035901 ctcctccgcctcctgcttggcc 2035922



to top

>gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence
          Length = 2179

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 508  ctgtgcctgcatgatcttctccatgttgg 536
            |||||||| ||||||| ||||||||||||
Sbjct: 1704 ctgtgccttcatgatcctctccatgttgg 1676



to top

>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 106     ctaatgaaatgaaagctaaat 126
               |||||||||||||||||||||
Sbjct: 1421262 ctaatgaaatgaaagctaaat 1421242



to top

>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11
          Length = 346357

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 309    agtccttggggtccggcaggt 329
              |||||||||||||||||||||
Sbjct: 266763 agtccttggggtccggcaggt 266743



to top

>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 222553

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 104    ttctaatgaaatgaaagctaa 124
              |||||||||||||||||||||
Sbjct: 112594 ttctaatgaaatgaaagctaa 112614



to top

>ref|NR_002839.1| Mus musculus distal-less homeobox 6, antisense (Dlx6as) on chromosome
            6
          Length = 1351

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 176  ggctcctccgcctcctgcttg 196
            |||||||||||||||||||||
Sbjct: 1084 ggctcctccgcctcctgcttg 1064



to top

>ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 (ENSANGG00000003636),
            partial mRNA
          Length = 3264

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 180  cctccgcctcctgcttggccg 200
            |||||||||||||||||||||
Sbjct: 1432 cctccgcctcctgcttggccg 1412



to top

>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence
          Length = 183177

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     aaccatcacatttccagtcca 95
              |||||||||||||||||||||
Sbjct: 132650 aaccatcacatttccagtcca 132630



to top

>gb|AY109427.1| Zea mays CL1264_2 mRNA sequence
          Length = 1267

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 508 ctgtgcctgcatgatcttctccatgttgg 536
           |||||||| ||||||| ||||||||||||
Sbjct: 687 ctgtgccttcatgatcctctccatgttgg 659



to top

>emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8, COMPLETE SEQUENCE
          Length = 165916

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 508   ctgtgcctgcatgatcttctccatgttgg 536
             |||||||| ||||||| ||||||||||||
Sbjct: 33488 ctgtgccttcatgatcctctccatgttgg 33460



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 508   ctgtgcctgcatgatcttctccatgttgg 536
             |||||||| ||||||| ||||||||||||
Sbjct: 22847 ctgtgccttcatgatcctctccatgttgg 22819



to top

>gb|AF022079.1|AF022079 Mus musculus antisense Dlx-6 mRNA, partial sequence
          Length = 1351

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 176  ggctcctccgcctcctgcttg 196
            |||||||||||||||||||||
Sbjct: 1084 ggctcctccgcctcctgcttg 1064



to top

>gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complete sequence
          Length = 211740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 176    ggctcctccgcctcctgcttg 196
              |||||||||||||||||||||
Sbjct: 107299 ggctcctccgcctcctgcttg 107319



to top

>gb|M60499.1|HUMPROFILC Human profilaggrin mRNA, 5' end
          Length = 1496

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 386 ccctcgctgtcgctgtcctgg 406
           |||||||||||||||||||||
Sbjct: 349 ccctcgctgtcgctgtcctgg 329



to top

>gb|M73492.1|LEIHSP90 Leishmania donovani heat shock protein 90 mRNA, 3' end
          Length = 2197

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 426  ccttgatgatggggtgccgggggttgatctcca 458
            |||||||||||||||| | |||||||| |||||
Sbjct: 1105 ccttgatgatggggtgtctggggttgagctcca 1073



to top

>gb|M92926.1|LEIHSP01 Leishmania amazonensis heat shock protein 83 gene, complete cds
          Length = 2106

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 422  agctccttgatgatggggtgccgggggttgatctcca 458
            ||||||||||||||||||||   |||||||| |||||
Sbjct: 1853 agctccttgatgatggggtgtttggggttgagctcca 1817



to top

>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 546    catactttggaggtgaccac 565
              ||||||||||||||||||||
Sbjct: 352499 catactttggaggtgaccac 352518



to top

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 554     ggaggtgaccaccacacagg 573
               ||||||||||||||||||||
Sbjct: 1304504 ggaggtgaccaccacacagg 1304485



to top

>ref|XM_598073.2| PREDICTED: Bos taurus similar to SLIT-ROBO Rho GTPase activating
            protein 2 (srGAP2) (Formin-binding protein 2)
            (LOC519843), partial mRNA
          Length = 2576

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 367  cctcgccgtctgcttcaggccctcgctg 394
            ||||||| |||||||| |||||||||||
Sbjct: 1086 cctcgccatctgcttcgggccctcgctg 1113



to top

>emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chromosome 11 Contains a
              novel gene and a CpG island, complete sequence
          Length = 214065

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    ctgcttcaggccctcgctgt 395
              ||||||||||||||||||||
Sbjct: 175515 ctgcttcaggccctcgctgt 175534



to top

>gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 171236

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   aatgaaatgaaagctaaatg 127
             ||||||||||||||||||||
Sbjct: 60679 aatgaaatgaaagctaaatg 60698



to top

>gb|AY942619.1| Leishmania braziliensis strain MHOM/PE/95/LQ2 heat shock protein
            (hsp-83) gene, complete cds
          Length = 3520

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 422  agctccttgatgatggggtg 441
            ||||||||||||||||||||
Sbjct: 2455 agctccttgatgatggggtg 2436



to top

>gb|AC079467.2|AC079467 Homo sapiens chromosome 5 clone RP11-357D18, complete sequence
          Length = 141591

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   aacttcatccatactttgga 556
             ||||||||||||||||||||
Sbjct: 87219 aacttcatccatactttgga 87238



to top

>gb|AC146881.3| Otolemur garnettii clone CH256-571D18, complete sequence
          Length = 240447

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 546   catactttggaggtgaccac 565
             ||||||||||||||||||||
Sbjct: 29222 catactttggaggtgaccac 29241



to top

>gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, complete sequence
          Length = 161786

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 106   ctaatgaaatgaaagctaaatggg 129
             ||||||||| ||||||||||||||
Sbjct: 22238 ctaatgaaaagaaagctaaatggg 22261



to top

>gb|AF247812.1|AF247812 Rattus norvegicus transcription factor FKHR mRNA, partial cds
          Length = 1000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 452 atctccaggaccctcttgcc 471
           ||||||||||||||||||||
Sbjct: 336 atctccaggaccctcttgcc 317



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     gcttcaggccctcgctgtcg 397
               ||||||||||||||||||||
Sbjct: 9004724 gcttcaggccctcgctgtcg 9004705



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 378     gcttcaggccctcgctgtcg 397
               ||||||||||||||||||||
Sbjct: 5172865 gcttcaggccctcgctgtcg 5172884



to top

>ref|XM_342244.2| PREDICTED: Rattus norvegicus forkhead box O1A (Foxo1a), mRNA
          Length = 4171

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 452  atctccaggaccctcttgcc 471
            ||||||||||||||||||||
Sbjct: 1259 atctccaggaccctcttgcc 1240



to top

>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031P18
          Length = 156535

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 173   tccggctcctccgcctcctgcttggccg 200
             ||||||||||||||||||| ||| ||||
Sbjct: 48116 tccggctcctccgcctcctccttcgccg 48143



to top

>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0026P23
          Length = 180188

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 173    tccggctcctccgcctcctgcttggccg 200
              ||||||||||||||||||| ||| ||||
Sbjct: 127670 tccggctcctccgcctcctccttcgccg 127697



to top

>gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequence
          Length = 174952

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ctaatgaaatgaaagctaaa 125
             ||||||||||||||||||||
Sbjct: 56061 ctaatgaaatgaaagctaaa 56080



to top

>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4,
             complete sequence
          Length = 99176

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    catttccagtccaacatttc 102
             ||||||||||||||||||||
Sbjct: 21017 catttccagtccaacatttc 21036



to top

>gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds
          Length = 2397

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 489  tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttgg 536
            |||||| ||||  ||||| ||| |||| ||||||| ||||||||||||
Sbjct: 1898 tgctcgtgtccctcagggcctgggccttcatgatcctctccatgttgg 1851



to top

>dbj|AP000785.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-619A14, complete
             sequence
          Length = 126000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   ggggctcaggtccaggctct 278
             ||||||||||||||||||||
Sbjct: 18841 ggggctcaggtccaggctct 18822



to top

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 178     ctcctccgcctcctgcttgg 197
               ||||||||||||||||||||
Sbjct: 1682827 ctcctccgcctcctgcttgg 1682846



to top

>dbj|D86216.1| Thermus aquaticus DNA for trehalose synthase, complete cds
          Length = 4219

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 449 ttgatctccaggaccctcttgccg 472
           |||| |||||||||||||||||||
Sbjct: 485 ttgagctccaggaccctcttgccg 462


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,055,883
Number of Sequences: 3902068
Number of extensions: 4055883
Number of successful extensions: 98220
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97862
Number of HSP's gapped (non-prelim): 353
length of query: 584
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 561
effective length of database: 17,143,297,704
effective search space: 9617390011944
effective search space used: 9617390011944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top