>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  103 bits (52), Expect = 7e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                           
Query: 510     aacctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggacaggattagca 569
               |||||||||||||||||||| |||||||| |||||||| |  | ||||||||||| ||||
Sbjct: 4825148 aacctgtcaagtgcttcagctttcttcttcatgtcagatattaagaggacaggatcagca 4825089

                                           
Query: 570     tgcttcggtagagcatcttgctgctgct 597
               ||||| ||||||||||| ||||||||||
Sbjct: 4825088 tgctttggtagagcatcctgctgctgct 4825061

>gb|AY103680.1| Zea mays PCO080984 mRNA sequence
          Length = 1931

 Score =  103 bits (52), Expect = 7e-19
 Identities = 121/144 (84%)
 Strand = Plus / Minus

                                                                        
Query: 456  ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 515
            ||||| ||||| || || || |||||| | ||||| |||||||| || ||||||||||| 
Sbjct: 1484 ggcggagtctgcggcttaggagctggcttcggtttcgtcatgatcggcttgcagaaccta 1425

                                                                        
Query: 516  tcaagtgcttcagccttcttctttatgtcagaaacaaggaggacaggattagcatgcttc 575
            ||||||| |||||| |||||||| | ||||| | ||||||| || | |||||||||||| 
Sbjct: 1424 tcaagtgtttcagctttcttcttaaggtcagcagcaaggagtaccgaattagcatgcttt 1365

                                    
Query: 576  ggtagagcatcttgctgctgcttt 599
            || |||||||| ||||||||||||
Sbjct: 1364 ggcagagcatcctgctgctgcttt 1341

>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score =  103 bits (52), Expect = 7e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                         
Query: 510   aacctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggacaggattagca 569
             |||||||||||||||||||| |||||||| |||||||| |  | ||||||||||| ||||
Sbjct: 97556 aacctgtcaagtgcttcagctttcttcttcatgtcagatattaagaggacaggatcagca 97497

                                         
Query: 570   tgcttcggtagagcatcttgctgctgct 597
             ||||| ||||||||||| ||||||||||
Sbjct: 97496 tgctttggtagagcatcctgctgctgct 97469

>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence
          Length = 2082

 Score =  101 bits (51), Expect = 3e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                        
Query: 456  ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 515
            ||||| |||||||| || || |||||| ||||||| |||||||| |||||||||||||||
Sbjct: 1642 ggcggagtctgtggcttcggagctggctttggtttagtcatgatcggtttgcagaacctg 1583

                                   
Query: 516  tcaagtgcttcagccttcttctt 538
            |||||||||||||| ||||||||
Sbjct: 1582 tcaagtgcttcagctttcttctt 1560

>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full
            insert sequence
          Length = 3137

 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                        
Query: 511  acctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggacaggattagcat 570
            ||||||||||||||||||| |||||||| |||||||| |  | ||||||||||| |||||
Sbjct: 2503 acctgtcaagtgcttcagctttcttcttcatgtcagatattaagaggacaggatcagcat 2444

                                       
Query: 571  gcttcggtagagcatcttgctgctgct 597
            |||| ||||||||||| ||||||||||
Sbjct: 2443 gctttggtagagcatcctgctgctgct 2417

>gb|AY108406.1| Zea mays PCO080983 mRNA sequence
          Length = 1289

 Score =  101 bits (51), Expect = 3e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                       
Query: 456 ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 515
           ||||| |||||||| || || |||||| ||||||| |||||||| |||||||||||||||
Sbjct: 820 ggcggagtctgtggcttcggagctggctttggtttagtcatgatcggtttgcagaacctg 761

                                  
Query: 516 tcaagtgcttcagccttcttctt 538
           |||||||||||||| ||||||||
Sbjct: 760 tcaagtgcttcagctttcttctt 738

>ref|NM_189556.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3139

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                        
Query: 501  ggtttgcagaacctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggaca 560
            |||||||||||||||||||  | ||| ||||| |||||||  ||||||   || ||||||
Sbjct: 2547 ggtttgcagaacctgtcaaccgtttcggcctttttctttaaatcagaagagagtaggaca 2488

                                               
Query: 561  ggattagcatgcttcggtagagcatcttgctgctg 595
            || |||||||||||||| |||||||||||||||||
Sbjct: 2487 gggttagcatgcttcggcagagcatcttgctgctg 2453

>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full
            insert sequence
          Length = 3139

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                        
Query: 501  ggtttgcagaacctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggaca 560
            |||||||||||||||||||  | ||| ||||| |||||||  ||||||   || ||||||
Sbjct: 2547 ggtttgcagaacctgtcaaccgtttcggcctttttctttaaatcagaagagagtaggaca 2488

                                               
Query: 561  ggattagcatgcttcggtagagcatcttgctgctg 595
            || |||||||||||||| |||||||||||||||||
Sbjct: 2487 gggttagcatgcttcggcagagcatcttgctgctg 2453

>dbj|AK061691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C02, full
           insert sequence
          Length = 1144

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                       
Query: 501 ggtttgcagaacctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggaca 560
           |||||||||||||||||||  | ||| ||||| |||||||  ||||||   || ||||||
Sbjct: 617 ggtttgcagaacctgtcaaccgtttcggcctttttctttaaatcagaagagagtaggaca 558

                                              
Query: 561 ggattagcatgcttcggtagagcatcttgctgctg 595
           || |||||||||||||| |||||||||||||||||
Sbjct: 557 gggttagcatgcttcggcagagcatcttgctgctg 523

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                        
Query: 555     aggacaggattagcatgcttcggtagagcatcttgctgctg 595
               |||||||| |||||||||||||| |||||||||||||||||
Sbjct: 4257850 aggacagggttagcatgcttcggcagagcatcttgctgctg 4257810

>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                      
Query: 555   aggacaggattagcatgcttcggtagagcatcttgctgctg 595
             |||||||| |||||||||||||| |||||||||||||||||
Sbjct: 95817 aggacagggttagcatgcttcggcagagcatcttgctgctg 95777

>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0666G04
          Length = 141983

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                      
Query: 555   aggacaggattagcatgcttcggtagagcatcttgctgctg 595
             |||||||| |||||||||||||| |||||||||||||||||
Sbjct: 37620 aggacagggttagcatgcttcggcagagcatcttgctgctg 37580

>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 526    cagccttcttctttatgtcag 546
              |||||||||||||||||||||
Sbjct: 530338 cagccttcttctttatgtcag 530318

>gb|AC116329.3| Mus musculus BAC clone RP24-290C19 from 5, complete sequence
          Length = 170072

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    ccgtagataaaaattacaacg 39
             |||||||||||||||||||||
Sbjct: 86431 ccgtagataaaaattacaacg 86411

>emb|AL356952.18| Human DNA sequence from clone RP11-809M12 on chromosome 10 Contains a
             novel gene and a CpG island, complete sequence
          Length = 129950

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 166   aaacactgcagaaactctcca 186
             |||||||||||||||||||||
Sbjct: 94033 aaacactgcagaaactctcca 94053

>emb|AL138997.18| Human DNA sequence from clone RP11-10O23 on chromosome 13 Contains a
              hepatocyte nuclear factor 4 alpha (HNF4A) pseudogene,
              complete sequence
          Length = 172342

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    aaacactgcagaaactctcca 186
              |||||||||||||||||||||
Sbjct: 159807 aaacactgcagaaactctcca 159787

>gb|AC091042.6| Homo sapiens chromosome 18, clone RP11-563H6, complete sequence
          Length = 149173

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 531   ttcttctttatgtcagaaaca 551
             |||||||||||||||||||||
Sbjct: 89809 ttcttctttatgtcagaaaca 89829

>emb|CR390310.1| Gallus gallus finished cDNA, clone ChEST234p17
          Length = 1645

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 210 gtatgaaaacagccattcctt 230
           |||||||||||||||||||||
Sbjct: 495 gtatgaaaacagccattcctt 475

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 285      tctcctcagatcgacacctct 305
                |||||||||||||||||||||
Sbjct: 23968123 tctcctcagatcgacacctct 23968143



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 285     tctcctcagatcgacacctct 305
               |||||||||||||||||||||
Sbjct: 6273780 tctcctcagatcgacacctct 6273760

>gb|AE009707.1| Brucella melitensis 16M chromosome II, section 69 of 107 of the
            complete sequence
          Length = 9807

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 526  cagccttcttctttatgtcag 546
            |||||||||||||||||||||
Sbjct: 1371 cagccttcttctttatgtcag 1391

>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1267_F10
          Length = 162669

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 285   tctcctcagatcgacacctct 305
             |||||||||||||||||||||
Sbjct: 71167 tctcctcagatcgacacctct 71147

>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 526    cagccttcttctttatgtcag 546
              |||||||||||||||||||||
Sbjct: 683960 cagccttcttctttatgtcag 683980

>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1476_F05
          Length = 125426

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 285  tctcctcagatcgacacctct 305
            |||||||||||||||||||||
Sbjct: 3161 tctcctcagatcgacacctct 3181

>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0496E03
          Length = 138622

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 285    tctcctcagatcgacacctct 305
              |||||||||||||||||||||
Sbjct: 102087 tctcctcagatcgacacctct 102107

>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence,
              strain 2308
          Length = 1156948

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 526    cagccttcttctttatgtcag 546
              |||||||||||||||||||||
Sbjct: 683948 cagccttcttctttatgtcag 683968

>gb|AC101684.13| Mus musculus chromosome 1, clone RP23-187I13, complete sequence
          Length = 227440

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 342    tgctcacccacatgctcatc 361
              ||||||||||||||||||||
Sbjct: 100132 tgctcacccacatgctcatc 100113

>gb|AC104574.4| Homo sapiens chromosome 15, clone RP11-259A24, complete sequence
          Length = 152130

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 526  cagccttcttctttatgtcagaaacaag 553
            |||||||||||||| ||||||| |||||
Sbjct: 2580 cagccttcttctttgtgtcagatacaag 2553

>gb|AC107908.3| Homo sapiens chromosome 15, clone CTD1-2291N1, complete sequence
          Length = 132718

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 526    cagccttcttctttatgtcagaaacaag 553
              |||||||||||||| ||||||| |||||
Sbjct: 112366 cagccttcttctttgtgtcagatacaag 112339

>gb|AC097489.2| Homo sapiens BAC clone RP11-226A18 from 4, complete sequence
          Length = 152039

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    gataaaaattacaacgttat 43
             ||||||||||||||||||||
Sbjct: 81064 gataaaaattacaacgttat 81045

>gb|AF303741.1|AF303741 Chilo iridescent virus complete genome
          Length = 212482

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   tttgattgttcttctggtgt 424
             ||||||||||||||||||||
Sbjct: 76801 tttgattgttcttctggtgt 76782

>gb|AC154183.2| Mus musculus BAC clone RP23-474E16 from chromosome 17, complete
             sequence
          Length = 181773

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   gaaactctccatgttctact 195
             ||||||||||||||||||||
Sbjct: 59334 gaaactctccatgttctact 59315

>gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 147895

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    tatcggtgtccatttgctca 347
              ||||||||||||||||||||
Sbjct: 144817 tatcggtgtccatttgctca 144836

>ref|NM_031749.1| Rattus norvegicus glucosidase 1 (Gcs1), mRNA
          Length = 2703

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 466 gtggttttggcgctggcctt 485
           ||||||||||||||||||||
Sbjct: 146 gtggttttggcgctggcctt 165

>gb|AF087431.1|AF087431 Rattus norvegicus glycoprotein processing glucosidase I mRNA,
           complete cds
          Length = 2703

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 466 gtggttttggcgctggcctt 485
           ||||||||||||||||||||
Sbjct: 146 gtggttttggcgctggcctt 165


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,595,347
Number of Sequences: 3902068
Number of extensions: 5595347
Number of successful extensions: 92020
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91864
Number of HSP's gapped (non-prelim): 156
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)