Clone Name	rbags25c24
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	199	4e-62
2	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	197	8e-62
3	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	199	1e-61
4	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	197	9e-61
5	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	196	1e-60
6	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	160	1e-49
7	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	162	2e-49
8	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	162	2e-49
9	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	162	2e-49
10	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	162	2e-49
11	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	160	1e-48
12	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	156	2e-48
13	CDC48_YEAST (P25694) Cell division control protein 48	115	1e-35
14	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	117	2e-35
15	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	89	1e-25
16	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	82	8e-22
17	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	71	2e-19
18	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	77	4e-19
19	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	67	2e-17
20	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	72	2e-17
21	VAT_THEAC (O05209) VCP-like ATPase	68	4e-17
22	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	73	5e-17
23	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	66	5e-17
24	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	69	6e-17
25	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	68	8e-17
26	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	68	8e-17
27	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	68	8e-17
28	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	68	8e-17
29	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	68	8e-17
30	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	67	1e-16
31	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	67	1e-16
32	SAV_SULAC (Q07590) SAV protein	67	2e-16
33	PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso...	61	3e-16
34	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	65	8e-16
35	PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso...	63	2e-15
36	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	63	2e-15
37	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	68	2e-15
38	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	63	2e-15
39	PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso...	62	3e-15
40	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	62	5e-15
41	PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso...	61	5e-15
42	PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso...	60	2e-14
43	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	59	3e-14
44	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	57	5e-14
45	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	57	5e-14
46	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	64	6e-14
47	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	56	2e-13
48	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	60	2e-13
49	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	60	2e-13
50	CDCH_HALSA (Q9HPF0) Protein cdcH	56	2e-13
51	PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso...	62	2e-13
52	PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (...	57	3e-13
53	NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl...	47	4e-13
54	AFG2_YEAST (P32794) Protein AFG2	60	4e-13
55	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	55	4e-13
56	PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso...	54	5e-13
57	NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl...	49	7e-13
58	RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7	48	1e-12
59	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	54	1e-12
60	PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1...	60	1e-12
61	TBP7_YEAST (P40340) TAT-binding homolog 7	53	2e-12
62	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	53	2e-12
63	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	53	2e-12
64	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	53	2e-12
65	PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote...	59	2e-12
66	PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote...	59	2e-12
67	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	52	2e-12
68	PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog	61	2e-12
69	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	55	4e-12
70	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	52	5e-12
71	FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2...	56	5e-12
72	PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote...	58	5e-12
73	PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote...	58	5e-12
74	PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog ...	59	6e-12
75	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	57	6e-12
76	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	57	6e-12
77	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	57	6e-12
78	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	51	1e-11
79	CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ...	54	1e-11
80	PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog	57	1e-11
81	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	51	1e-11
82	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	51	1e-11
83	PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (S...	55	1e-11
84	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	50	2e-11
85	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	50	2e-11
86	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	57	2e-11
87	PRS8_DROME (O18413) 26S protease regulatory subunit 8	54	2e-11
88	PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 pro...	54	2e-11
89	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	50	3e-11
90	FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2...	54	3e-11
91	FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2...	54	3e-11
92	PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P...	53	3e-11
93	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	51	4e-11
94	PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease sub...	54	4e-11
95	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	49	5e-11
96	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	53	5e-11
97	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	52	5e-11
98	PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (T...	59	5e-11
99	PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog ...	55	6e-11
100	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	53	8e-11
101	PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 prot...	54	8e-11
102	PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)	54	8e-11
103	PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 prot...	54	8e-11
104	PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 prot...	54	8e-11
105	PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase ...	55	8e-11
106	PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote...	55	8e-11
107	PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B	54	1e-10
108	PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4	54	1e-10
109	PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-bindi...	54	1e-10
110	PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)...	54	1e-10
111	PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxi...	51	2e-10
112	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	47	2e-10
113	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	47	2e-10
114	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	50	2e-10
115	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	53	3e-10
116	PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)...	53	3e-10
117	PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	47	4e-10
118	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	64	4e-10
119	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	50	5e-10
120	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	50	5e-10
121	PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)	55	5e-10
122	PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homo...	51	9e-10
123	PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome ...	51	9e-10
124	PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome ...	51	9e-10
125	PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasom...	51	9e-10
126	PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasom...	51	9e-10
127	PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasom...	51	9e-10
128	ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2	47	1e-09
129	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	49	1e-09
130	PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	45	2e-09
131	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	49	2e-09
132	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	49	2e-09
133	PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (P...	52	3e-09
134	PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-bindi...	49	3e-09
135	PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-bin...	49	3e-09
136	PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7	49	3e-09
137	ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2	45	4e-09
138	PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxi...	45	4e-09
139	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	49	4e-09
140	PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-bin...	48	4e-09
141	PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Pro...	52	4e-09
142	PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (P...	52	4e-09
143	PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (P...	52	4e-09
144	PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-bin...	49	4e-09
145	ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2	45	5e-09
146	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	46	5e-09
147	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	45	5e-09
148	PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-b...	48	5e-09
149	PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-bindi...	49	5e-09
150	PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)	45	7e-09
151	PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)	43	7e-09
152	PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog ...	46	7e-09
153	PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Prote...	49	7e-09
154	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	60	8e-09
155	SEC18_YEAST (P18759) Vesicular-fusion protein SEC18	47	9e-09
156	NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	45	9e-09
157	PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog ...	45	9e-09
158	PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (T...	47	9e-09
159	PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)	42	1e-08
160	SEC18_CANAL (P34732) Vesicular-fusion protein SEC18	47	1e-08
161	PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	40	1e-08
162	PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog ...	45	2e-08
163	PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog ...	45	2e-08
164	PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	44	2e-08
165	PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	44	2e-08
166	PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxiso...	44	2e-08
167	TBP7_CAEEL (P54816) TAT-binding homolog 7	44	2e-08
168	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	47	2e-08
169	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	44	2e-08
170	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	58	3e-08
171	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	58	3e-08
172	PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)	39	3e-08
173	PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)	40	3e-08
174	SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog	45	3e-08
175	PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4	49	4e-08
176	PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A	46	4e-08
177	PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)	39	5e-08
178	PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (C...	45	5e-08
179	FTSH_CHLVU (P56369) Cell division protein ftsH homolog	38	7e-08
180	PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog ...	42	2e-07
181	KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ...	55	2e-07
182	PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog	43	2e-07
183	PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)	38	3e-07
184	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	55	3e-07
185	PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)	40	3e-07
186	KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik...	54	3e-07
187	KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik...	54	4e-07
188	PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	38	5e-07
189	PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog	44	6e-07
190	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	54	6e-07
191	NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	38	9e-07
192	NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	38	9e-07
193	NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	38	9e-07
194	PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-b...	40	9e-07
195	PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (T...	45	1e-06
196	NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	40	2e-06
197	PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog	39	2e-06
198	Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316	37	3e-06
199	MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ...	51	4e-06
200	Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c	37	9e-06
201	Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175	37	9e-06
202	NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleim...	39	1e-05
203	NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleim...	36	2e-05
204	PRS2_METJA (Q58889) Putative 26S protease regulatory subunit hom...	34	4e-05
205	MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)	41	8e-05
206	SPAST_HUMAN (Q9UBP0) Spastin	41	1e-04
207	SPAST_MOUSE (Q9QYY8) Spastin	41	1e-04
208	AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)	39	3e-04
209	ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein...	40	4e-04
210	ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein...	41	4e-04
211	PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (P...	42	0.001
212	YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46	40	0.005
213	ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1	37	0.006
214	ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1	37	0.006
215	ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1	37	0.006
216	VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a	40	0.009
217	VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) ...	40	0.009
218	TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-bind...	40	0.009
219	SAP1_YEAST (P39955) Protein SAP1	37	0.043
220	YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)	37	0.056
221	VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants	37	0.056
222	PRS2_METTM (P42811) Putative 26S protease regulatory subunit hom...	36	0.096
223	PRS2_METTH (O27092) Putative 26S protease regulatory subunit hom...	36	0.096
224	YCF2_MARPO (P09975) Protein ycf2	33	0.11
225	VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein ...	35	0.16
226	YCF2_PSINU (Q8WHW9) Protein ycf2	35	0.21
227	VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)	35	0.28
228	VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)	34	0.36
229	YCF2_ANTFO (Q859W7) Protein ycf2	30	1.3
230	YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC ...	32	1.4
231	ROK1_CANGA (Q6FN65) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)	32	1.8
232	UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (E...	32	2.4
233	BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-...	26	2.5
234	LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3....	30	6.9
235	RL17_AQUAE (O66482) 50S ribosomal protein L17	30	9.0
236	CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)	30	9.0

---

>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score =  199 bits (505), Expect(2) = 4e-62
 Identities = 107/144 (74%), Positives = 112/144 (77%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PALLRPGRLDQLIYIPLPD DSRHQIFKACLRKSPL+KDIDL ALAK+TQGFS AD+TEI
Sbjct: 635  PALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEI 694

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
            CQRACKYAI                NP            EI+ AHFEESMKYARRSVSDA
Sbjct: 695  CQRACKYAIRENIEKDIEREKRRQENP-DSMDEDVDEVPEIKPAHFEESMKYARRSVSDA 753

Query: 241  DIRKYQAFAQTLQQSRGFGSEFRF 170
            DIRKYQAFAQTLQQSRGFG+EFRF
Sbjct: 754  DIRKYQAFAQTLQQSRGFGTEFRF 777



 Score = 59.7 bits (143), Expect(2) = 4e-62
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTEMDGMNAKKTVFIIGATNRPDIIDP
Sbjct: 608 LLTEMDGMNAKKTVFIIGATNRPDIIDP 635



 Score = 44.7 bits (104), Expect(2) = 1e-09
 Identities = 24/69 (34%), Positives = 37/69 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ I I +PD   R ++     +   LA+++DL  ++K T G+  AD+  +
Sbjct: 359 PALRRFGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAAL 418

Query: 421 CQRACKYAI 395
           C  A    I
Sbjct: 419 CTEAALQCI 427



 Score = 37.7 bits (86), Expect(2) = 1e-09
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+ ++  V ++GATNRP+ IDP
Sbjct: 332 LLTLMDGLKSRAHVIVMGATNRPNSIDP 359

---

>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
            (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score =  197 bits (502), Expect(2) = 8e-62
 Identities = 104/144 (72%), Positives = 112/144 (77%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PALLRPGRLDQLIYIPLPD +SR+QIFK+CLRKSP+AKD+DL ALAKYTQGFS ADITEI
Sbjct: 635  PALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEI 694

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
            CQR+CKYAI                +P            EI+A HFEESMKYARRSVSDA
Sbjct: 695  CQRSCKYAIRENIEKDIEKERKRAESP-EAMEEDEEEIAEIKAGHFEESMKYARRSVSDA 753

Query: 241  DIRKYQAFAQTLQQSRGFGSEFRF 170
            DIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 754  DIRKYQAFAQTLQQSRGFGSEFRF 777



 Score = 59.7 bits (143), Expect(2) = 8e-62
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTEMDGMNAKKTVFIIGATNRPDIIDP
Sbjct: 608 LLTEMDGMNAKKTVFIIGATNRPDIIDP 635



 Score = 47.4 bits (111), Expect(2) = 2e-10
 Identities = 25/69 (36%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ I I +PD   R ++ +   +   LA+D+DL  ++K T G+  AD+  +
Sbjct: 359 PALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAAL 418

Query: 421 CQRACKYAI 395
           C  A    I
Sbjct: 419 CTEAALQCI 427



 Score = 37.7 bits (86), Expect(2) = 2e-10
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+ ++  V ++GATNRP+ IDP
Sbjct: 332 LLTLMDGLKSRAHVIVMGATNRPNSIDP 359

---

>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
            protein homolog) (VCP)
          Length = 807

 Score =  199 bits (505), Expect(2) = 1e-61
 Identities = 106/145 (73%), Positives = 113/145 (77%), Gaps = 1/145 (0%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PALLRPGRLDQLIYIPLPD DSRHQIFKACLRKSP+AK++DL ALA++TQGFS ADITEI
Sbjct: 635  PALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEI 694

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNP-XXXXXXXXXXXXEIRAAHFEESMKYARRSVSD 245
            CQRACKYAI                NP             EI+AAHFEESMK+ARRSVSD
Sbjct: 695  CQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFARRSVSD 754

Query: 244  ADIRKYQAFAQTLQQSRGFGSEFRF 170
            ADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 755  ADIRKYQAFAQTLQQSRGFGSEFRF 779



 Score = 57.8 bits (138), Expect(2) = 1e-61
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTEMDGM+AKKTVFIIGATNRPDIIDP
Sbjct: 608 LLTEMDGMSAKKTVFIIGATNRPDIIDP 635



 Score = 47.0 bits (110), Expect(2) = 1e-10
 Identities = 25/69 (36%), Positives = 37/69 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ I I +PD   R ++ +   +   L+ D+DL  +AK T G+  AD+  +
Sbjct: 359 PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAAL 418

Query: 421 CQRACKYAI 395
           C  A    I
Sbjct: 419 CTEAALQCI 427



 Score = 38.9 bits (89), Expect(2) = 1e-10
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+ ++  V +IGATNRP+ IDP
Sbjct: 332 LLTLMDGLKSRAHVIVIGATNRPNSIDP 359

---

>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score =  197 bits (500), Expect(2) = 9e-61
 Identities = 105/143 (73%), Positives = 109/143 (76%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
            ALLRPGRLDQLIYIPLPD DSR  IFKA LRKSP+AKD+D+ ALAKYTQGFS ADITEIC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEIC 695

Query: 418  QRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDAD 239
            QRACKYAI                NP            EI+AAHFEESMKYARRSVSDAD
Sbjct: 696  QRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDAD 755

Query: 238  IRKYQAFAQTLQQSRGFGSEFRF 170
            IRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 756  IRKYQAFAQTLQQSRGFGSEFRF 778



 Score = 57.0 bits (136), Expect(2) = 9e-61
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDGMNAKKTVFIIGATNRPDIID
Sbjct: 608 LLTEMDGMNAKKTVFIIGATNRPDIID 634



 Score = 47.8 bits (112), Expect(2) = 1e-10
 Identities = 25/69 (36%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ I I +PD   R ++ +   +   LA+D+DL  ++K T G+  AD+  +
Sbjct: 358 PALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAAL 417

Query: 421 CQRACKYAI 395
           C  A    I
Sbjct: 418 CTEAALQCI 426



 Score = 37.7 bits (86), Expect(2) = 1e-10
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+ ++  V ++GATNRP+ IDP
Sbjct: 331 LLTLMDGLKSRAHVIVMGATNRPNSIDP 358

---

>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
            (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score =  196 bits (499), Expect(2) = 1e-60
 Identities = 107/144 (74%), Positives = 111/144 (77%), Gaps = 1/144 (0%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
            ALLRPGRLDQLIYIPLPD DSR  IFKACLRKSP+AKD+D++ALAKYTQGFS ADITEIC
Sbjct: 635  ALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEIC 694

Query: 418  QRACKYAIXXXXXXXXXXXXXXXXNP-XXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
            QRACKYAI                NP             EIRAAHFEESMKYARRSVSDA
Sbjct: 695  QRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDA 754

Query: 241  DIRKYQAFAQTLQQSRGFGSEFRF 170
            DIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 755  DIRKYQAFAQTLQQSRGFGSEFRF 778



 Score = 57.0 bits (136), Expect(2) = 1e-60
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDGMNAKKTVFIIGATNRPDIID
Sbjct: 607 LLTEMDGMNAKKTVFIIGATNRPDIID 633



 Score = 47.8 bits (112), Expect(2) = 1e-10
 Identities = 25/69 (36%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ I I +PD   R ++ +   +   LA+D+DL  ++K T G+  AD+  +
Sbjct: 358 PALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAAL 417

Query: 421 CQRACKYAI 395
           C  A    I
Sbjct: 418 CTEAALQCI 426



 Score = 37.7 bits (86), Expect(2) = 1e-10
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+ ++  V ++GATNRP+ IDP
Sbjct: 331 LLTLMDGLKSRAHVIVMGATNRPNSIDP 358

---

>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
            (p97/CDC48 homolog 1)
          Length = 809

 Score =  160 bits (405), Expect(2) = 1e-49
 Identities = 87/148 (58%), Positives = 100/148 (67%), Gaps = 4/148 (2%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PA+LRPGRLDQLIYIPLPD  SRHQI KA LRK+PL+KD+DL+ LAK T GFS AD+TEI
Sbjct: 638  PAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEI 697

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE----IRAAHFEESMKYARRS 254
            CQRACK AI                              +    I  AHFEE+MK+ARRS
Sbjct: 698  CQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKFARRS 757

Query: 253  VSDADIRKYQAFAQTLQQSRGFGSEFRF 170
            V+D DIRKY+ FAQTLQQSRGFG+ F+F
Sbjct: 758  VTDNDIRKYEMFAQTLQQSRGFGNNFKF 785



 Score = 56.6 bits (135), Expect(2) = 1e-49
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +LTEMDGMNAKK VFIIGATNRPDIIDP
Sbjct: 611 VLTEMDGMNAKKNVFIIGATNRPDIIDP 638



 Score = 44.7 bits (104), Expect(2) = 3e-08
 Identities = 24/63 (38%), Positives = 33/63 (52%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           AL R GR D+ I I +PD   R +I +   +   LA D+DL  +A    GF  AD+  +C
Sbjct: 362 ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLC 421

Query: 418 QRA 410
             A
Sbjct: 422 SEA 424



 Score = 32.7 bits (73), Expect(2) = 3e-08
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLT MDG+  +  + +I ATNRP+ ID
Sbjct: 334 LLTLMDGVKGRSNLVVIAATNRPNSID 360

---

>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  162 bits (411), Expect(2) = 2e-49
 Identities = 91/144 (63%), Positives = 99/144 (68%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PA+LRPGRLDQLIYIPLPD  SR  I KA LRKSP+AKD+DL  LAK T GFS AD+TEI
Sbjct: 630  PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 689

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
            CQRACK AI                NP            EIR  HFEE+M++ARRSVSD 
Sbjct: 690  CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 749

Query: 241  DIRKYQAFAQTLQQSRGFGSEFRF 170
            DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 750  DIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 53.5 bits (127), Expect(2) = 2e-49
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +LTEMDGM+ KK VFIIGATNRPDIIDP
Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDP 630



 Score = 48.1 bits (113), Expect(2) = 8e-10
 Identities = 26/69 (37%), Positives = 36/69 (52%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ + I +PD   R +I +   +   LA D+DL  +A  T G   AD+  +
Sbjct: 354 PALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 413

Query: 421 CQRACKYAI 395
           C  A   AI
Sbjct: 414 CSEAALQAI 422



 Score = 34.7 bits (78), Expect(2) = 8e-10
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+  +  V ++ ATNRP+ IDP
Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDP 354

---

>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  162 bits (411), Expect(2) = 2e-49
 Identities = 91/144 (63%), Positives = 99/144 (68%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PA+LRPGRLDQLIYIPLPD  SR  I KA LRKSP+AKD+DL  LAK T GFS AD+TEI
Sbjct: 630  PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 689

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
            CQRACK AI                NP            EIR  HFEE+M++ARRSVSD 
Sbjct: 690  CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 749

Query: 241  DIRKYQAFAQTLQQSRGFGSEFRF 170
            DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 750  DIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 53.5 bits (127), Expect(2) = 2e-49
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +LTEMDGM+ KK VFIIGATNRPDIIDP
Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDP 630



 Score = 48.1 bits (113), Expect(2) = 8e-10
 Identities = 26/69 (37%), Positives = 36/69 (52%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ + I +PD   R +I +   +   LA D+DL  +A  T G   AD+  +
Sbjct: 354 PALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 413

Query: 421 CQRACKYAI 395
           C  A   AI
Sbjct: 414 CSEAALQAI 422



 Score = 34.7 bits (78), Expect(2) = 8e-10
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+  +  V ++ ATNRP+ IDP
Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDP 354

---

>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  162 bits (411), Expect(2) = 2e-49
 Identities = 91/144 (63%), Positives = 99/144 (68%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PA+LRPGRLDQLIYIPLPD  SR  I KA LRKSP+AKD+DL  LAK T GFS AD+TEI
Sbjct: 630  PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 689

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
            CQRACK AI                NP            EIR  HFEE+M++ARRSVSD 
Sbjct: 690  CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 749

Query: 241  DIRKYQAFAQTLQQSRGFGSEFRF 170
            DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 750  DIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 53.5 bits (127), Expect(2) = 2e-49
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +LTEMDGM+ KK VFIIGATNRPDIIDP
Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDP 630



 Score = 48.1 bits (113), Expect(2) = 8e-10
 Identities = 26/69 (37%), Positives = 36/69 (52%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ + I +PD   R +I +   +   LA D+DL  +A  T G   AD+  +
Sbjct: 354 PALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 413

Query: 421 CQRACKYAI 395
           C  A   AI
Sbjct: 414 CSEAALQAI 422



 Score = 34.7 bits (78), Expect(2) = 8e-10
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+  +  V ++ ATNRP+ IDP
Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDP 354

---

>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  162 bits (411), Expect(2) = 2e-49
 Identities = 91/144 (63%), Positives = 99/144 (68%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PA+LRPGRLDQLIYIPLPD  SR  I KA LRKSP+AKD+DL  LAK T GFS AD+TEI
Sbjct: 630  PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 689

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
            CQRACK AI                NP            EIR  HFEE+M++ARRSVSD 
Sbjct: 690  CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 749

Query: 241  DIRKYQAFAQTLQQSRGFGSEFRF 170
            DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 750  DIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 53.5 bits (127), Expect(2) = 2e-49
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +LTEMDGM+ KK VFIIGATNRPDIIDP
Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDP 630



 Score = 48.1 bits (113), Expect(2) = 8e-10
 Identities = 26/69 (37%), Positives = 36/69 (52%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ + I +PD   R +I +   +   LA D+DL  +A  T G   AD+  +
Sbjct: 354 PALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAL 413

Query: 421 CQRACKYAI 395
           C  A   AI
Sbjct: 414 CSEAALQAI 422



 Score = 34.7 bits (78), Expect(2) = 8e-10
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+  +  V ++ ATNRP+ IDP
Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDP 354

---

>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score =  160 bits (404), Expect(2) = 1e-48
 Identities = 90/144 (62%), Positives = 98/144 (68%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PA+LRPGRLDQLIYIPLPD  SR  I KA LRKSP+AKD+D+  LAK T GFS AD+TEI
Sbjct: 631  PAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEI 690

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
            CQRACK AI                NP            EIR  HFEE+M+ ARRSVSD 
Sbjct: 691  CQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRLARRSVSDN 750

Query: 241  DIRKYQAFAQTLQQSRGFGSEFRF 170
            DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 751  DIRKYEMFAQTLQQSRGFGS-FRF 773



 Score = 53.1 bits (126), Expect(2) = 1e-48
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +LTEMDGM+ KK VFIIGATNRPDIIDP
Sbjct: 604 ILTEMDGMSIKKNVFIIGATNRPDIIDP 631



 Score = 46.2 bits (108), Expect(2) = 3e-09
 Identities = 25/69 (36%), Positives = 36/69 (52%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ + I +PD   R +I +   +   L+ D+DL  +A  T G   AD+  +
Sbjct: 355 PALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAAL 414

Query: 421 CQRACKYAI 395
           C  A   AI
Sbjct: 415 CSEAALQAI 423



 Score = 34.7 bits (78), Expect(2) = 3e-09
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+  +  V ++ ATNRP+ IDP
Sbjct: 328 LLTLMDGLKQRAHVIVMAATNRPNSIDP 355

---

>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
            (p97/CDC48 homolog 2)
          Length = 810

 Score =  156 bits (394), Expect(2) = 2e-48
 Identities = 86/148 (58%), Positives = 99/148 (66%), Gaps = 4/148 (2%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PA+LRPGRLDQLIYIPLPD  SR QIFKA LRK+PL+ D+DL+ LAK T GFS AD+TEI
Sbjct: 636  PAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEI 695

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE----IRAAHFEESMKYARRS 254
            CQRACK AI                              +    I  AHFEE+MK+ARRS
Sbjct: 696  CQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFARRS 755

Query: 253  VSDADIRKYQAFAQTLQQSRGFGSEFRF 170
            V+D DIRKY+ FAQTLQQSRGFG+ F+F
Sbjct: 756  VTDNDIRKYEMFAQTLQQSRGFGNNFKF 783



 Score = 56.6 bits (135), Expect(2) = 2e-48
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +LTEMDGMNAKK VFIIGATNRPDIIDP
Sbjct: 609 VLTEMDGMNAKKNVFIIGATNRPDIIDP 636



 Score = 43.5 bits (101), Expect(2) = 5e-08
 Identities = 23/63 (36%), Positives = 33/63 (52%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           AL R GR D+ I I +PD   R +I +   +   L +D+DL  +A    GF  AD+  +C
Sbjct: 361 ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLC 420

Query: 418 QRA 410
             A
Sbjct: 421 SEA 423



 Score = 33.1 bits (74), Expect(2) = 5e-08
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLT MDG+  +  V +I ATNRP+ ID
Sbjct: 333 LLTLMDGLKTRAHVVVIAATNRPNSID 359

---

>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score =  115 bits (288), Expect(2) = 1e-35
 Identities = 67/156 (42%), Positives = 87/156 (55%), Gaps = 12/156 (7%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PA+LRPGRLDQLIY+PLPD ++R  I  A LRK+PL   ++L+A+AK TQGFS AD+  I
Sbjct: 641  PAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYI 700

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXX------------EIRAAHFEE 278
             QRA KYAI                                           I   HF E
Sbjct: 701  VQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYITKEHFAE 760

Query: 277  SMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 170
            +MK A+RSVSDA++R+Y+A++Q ++ SRG  S F F
Sbjct: 761  AMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNFNF 796



 Score = 54.7 bits (130), Expect(2) = 1e-35
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTEMDGMNAKK VF+IGATNRPD IDP
Sbjct: 614 LLTEMDGMNAKKNVFVIGATNRPDQIDP 641



 Score = 52.0 bits (123), Expect(2) = 2e-12
 Identities = 27/69 (39%), Positives = 37/69 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ + I +PD   R ++ +   +   LA D+DL ALA  T G+  ADI  +
Sbjct: 365 PALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASL 424

Query: 421 CQRACKYAI 395
           C  A    I
Sbjct: 425 CSEAAMQQI 433



 Score = 39.7 bits (91), Expect(2) = 2e-12
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDGM A+  V +I ATNRP+ IDP
Sbjct: 338 LLTLMDGMKARSNVVVIAATNRPNSIDP 365

---

>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score =  117 bits (292), Expect(2) = 2e-35
 Identities = 63/138 (45%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PAL+RPGRLDQLIY+PLPD ++R  I +  LR +P+A+D+DL A+AK T GFS AD+  +
Sbjct: 650  PALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFV 709

Query: 421  CQRACKYAIXXXXXXXXXXXXXXXXNPX-XXXXXXXXXXXEIRAAHFEESMKYARRSVSD 245
             QRA K AI                 P             +++  H EE+MK ARRSVSD
Sbjct: 710  VQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDEDASVSQVQRHHVEEAMKMARRSVSD 769

Query: 244  ADIRKYQAFAQTLQQSRG 191
            A++R+Y+A+A  L  SRG
Sbjct: 770  AEVRRYEAYAHQLLTSRG 787



 Score = 52.0 bits (123), Expect(2) = 2e-35
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTEMDG+N+KK VF+IGATNRPD IDP
Sbjct: 623 LLTEMDGVNSKKNVFVIGATNRPDQIDP 650



 Score = 46.6 bits (109), Expect(2) = 2e-10
 Identities = 23/69 (33%), Positives = 36/69 (52%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ + + +PD   R +I +   +   LA D+DL  +A  T G+  +D+  +
Sbjct: 375 PALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASL 434

Query: 421 CQRACKYAI 395
           C  A    I
Sbjct: 435 CSEAAMQQI 443



 Score = 38.5 bits (88), Expect(2) = 2e-10
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDGM A+  V ++ ATNRP+ IDP
Sbjct: 348 LLTLMDGMKARSNVVVMAATNRPNSIDP 375

---

>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score = 89.0 bits (219), Expect(2) = 1e-25
 Identities = 52/138 (37%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
            AL RPGRLD+LIYI LPD+ SR+ IFKA L+ +PL +D+D+  +AK T+GFS ADIT +C
Sbjct: 1087 ALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLC 1146

Query: 418  QRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXX-------EIRAAHFEESMKYAR 260
            Q A   AI                                      +   HF+ + K AR
Sbjct: 1147 QSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTDTYDPVPTLSKKHFDLAFKNAR 1206

Query: 259  RSVSDADIRKYQAFAQTL 206
             S+   D+ KY+ F + L
Sbjct: 1207 ISIQPEDVLKYEKFKEKL 1224



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
 Frame = -1

Query: 655 LRKPSSSLVLPTGQ--TS*TPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDI 482
           L+K ++ LVL       S  PAL R GR D+ I IP+PD   R++I     +K  L  D+
Sbjct: 658 LKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDV 717

Query: 481 DLSALAKYTQGFSVADITEICQRA 410
           +L  +AK   G+  AD+ ++C  A
Sbjct: 718 NLRKIAKECHGYVGADLAQLCFEA 741



 Score = 47.8 bits (112), Expect(2) = 1e-25
 Identities = 20/27 (74%), Positives = 25/27 (92%)
 Frame = -3

Query: 683  LLTEMDGMNAKKTVFIIGATNRPDIID 603
            +LTE+DG+N KKT+FII ATNRPDI+D
Sbjct: 1059 ILTEIDGINEKKTIFIIAATNRPDILD 1085



 Score = 35.4 bits (80), Expect = 0.16
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+     V ++ ATNRP+ IDP
Sbjct: 651 LLTLMDGLKKNNNVLVLAATNRPNSIDP 678

---

>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 82.0 bits (201), Expect(2) = 8e-22
 Identities = 48/126 (38%), Positives = 67/126 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRL++ IYIP PD  +R +IFK  LR  PLA D+++  LA+ T+G+S ADI  +
Sbjct: 607 PALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAV 666

Query: 421 CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
           C+ A   AI                              +I   HFEE++K  R S++  
Sbjct: 667 CREAGMLAIRELIKPGM----------TREEAKEAAKKLKITKKHFEEALKKVRPSLTKE 716

Query: 241 DIRKYQ 224
           D+ KY+
Sbjct: 717 DVEKYE 722



 Score = 66.2 bits (160), Expect(2) = 4e-16
 Identities = 32/69 (46%), Positives = 45/69 (65%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL RPGR D+ I I +PD + R +I +   RK PLA+D+DL  LA+ T GF  AD+  +
Sbjct: 333 PALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEAL 392

Query: 421 CQRACKYAI 395
           C+ A  +A+
Sbjct: 393 CKEAAMHAL 401



 Score = 41.6 bits (96), Expect(2) = 8e-22
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTE+DG+   K V +I ATNRPD+IDP
Sbjct: 580 LLTELDGLEELKDVVVIAATNRPDMIDP 607



 Score = 38.1 bits (87), Expect(2) = 4e-16
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL  MDG+ A+  V +I ATNRPD IDP
Sbjct: 306 LLALMDGLEARGDVIVIAATNRPDAIDP 333

---

>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score = 71.2 bits (173), Expect(2) = 2e-19
 Identities = 34/69 (49%), Positives = 48/69 (69%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD++I +P+PD  +R  IFK   R   LA+D++L  LAK T+G++ ADI  +
Sbjct: 604 PALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEAL 663

Query: 421 CQRACKYAI 395
           C+ A   A+
Sbjct: 664 CREAAMLAV 672



 Score = 62.0 bits (149), Expect(2) = 9e-15
 Identities = 31/69 (44%), Positives = 42/69 (60%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL RPGR D+ I I +PD + R +I +   R  PLA+D+DL  LA  T GF  AD+  +
Sbjct: 330 PALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAAL 389

Query: 421 CQRACKYAI 395
           C+ A   A+
Sbjct: 390 CKEAAMRAL 398



 Score = 44.3 bits (103), Expect(2) = 2e-19
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTE+DGM   K V +I ATNRPDIIDP
Sbjct: 577 LLTELDGMEEPKDVVVIAATNRPDIIDP 604



 Score = 37.7 bits (86), Expect(2) = 9e-15
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+  +  V +IGATNRP+ +DP
Sbjct: 303 LLTLMDGLKGRGQVVVIGATNRPNALDP 330

---

>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score = 76.6 bits (187), Expect(2) = 4e-19
 Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYT-QGFSVADITE 425
            PA LRPGR   L+Y+PLP+ D R  I KA  RK P+   +DL  +AK   +GFS AD+  
Sbjct: 678  PAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAH 737

Query: 424  ICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSD 245
            + Q+A   A+                +              I+  HFE+++     SV+ 
Sbjct: 738  LVQKATFQAV----------EEMIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNK 787

Query: 244  ADIRKYQAFAQTLQQSRGFGSE 179
               R Y A +  LQ+S G  +E
Sbjct: 788  QQRRHYDALSTKLQESVGRNTE 809



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
 Frame = -1

Query: 643 SSSLVLPTGQTS*T----PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDL 476
           S+  VL  G T+      PAL R GR +  I +  PD D+R +I     +K  L    D 
Sbjct: 376 SAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDK 435

Query: 475 SALAKYTQGFSVADITEICQRACKYAI 395
             +A+ T GF  AD+  +   A + AI
Sbjct: 436 KRIARLTPGFVGADLESVAYLAGRKAI 462



 Score = 37.7 bits (86), Expect(2) = 4e-19
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = -3

Query: 680 LTEMDGMNAKKTVFIIGATNRPDIIDP 600
           L E+DG   ++ V++IGATNRPD++DP
Sbjct: 653 LVELDG-GERRNVYVIGATNRPDVVDP 678



 Score = 30.4 bits (67), Expect = 5.2
 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 10/38 (26%)
 Frame = -3

Query: 683 LLTEMDGMNAKKT----------VFIIGATNRPDIIDP 600
           LLT MDG   K            V +IGATNRPD +DP
Sbjct: 357 LLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDP 394

---

>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score = 67.4 bits (163), Expect(2) = 2e-17
 Identities = 31/69 (44%), Positives = 46/69 (66%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PA+LRPGR D+L+++P+P +++R +I K    K  LA+DID   LAK T+G S AD+  I
Sbjct: 313 PAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAI 372

Query: 421 CQRACKYAI 395
              A  +A+
Sbjct: 373 ATEAGMFAV 381



 Score = 41.6 bits (96), Expect(2) = 2e-17
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG + +K + II ATNRPD++DP
Sbjct: 286 LLAEMDGFDKRKNIRIIAATNRPDVLDP 313

---

>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score = 72.4 bits (176), Expect(2) = 2e-17
 Identities = 36/69 (52%), Positives = 46/69 (66%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PA+LRPGR D++I +PLP  + R QIFK   RK  LA+D+D   LA+ T+G S ADI  I
Sbjct: 295 PAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAI 354

Query: 421 CQRACKYAI 395
           C  A  +AI
Sbjct: 355 CTEAGMFAI 363



 Score = 36.2 bits (82), Expect(2) = 2e-17
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL E+DG + +  V +IGATNR DI+DP
Sbjct: 268 LLAELDGFDPRGDVKVIGATNRIDILDP 295

---

>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score = 67.8 bits (164), Expect(2) = 4e-17
 Identities = 41/135 (30%), Positives = 66/135 (48%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLR GR D+LIYIP PD ++R  I K   +  PLA D+DL+ +A+ T+G+  AD+  +
Sbjct: 619 PALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENL 678

Query: 421 CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
           C+ A   A                                +   +F +++K  R SV + 
Sbjct: 679 CREAGMNA-----------------------YRENPDATSVSQKNFLDALKTIRPSVDEE 715

Query: 241 DIRKYQAFAQTLQQS 197
            I+ Y+  ++T+ +S
Sbjct: 716 VIKFYRTLSETMSKS 730



 Score = 43.9 bits (102), Expect(2) = 2e-09
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLA-----KDIDLSALAKYTQGFSVA 437
           PAL RPGR D+ I I +PD + R +I     R  PL      K+  L  +A YT GF  A
Sbjct: 341 PALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGA 400

Query: 436 DITEICQRACKYAI 395
           D+  + + +   A+
Sbjct: 401 DLAALVRESAMNAL 414



 Score = 40.0 bits (92), Expect(2) = 4e-17
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT +DG+     V +IGATNRPDI+DP
Sbjct: 592 LLTSLDGIEVMNGVVVIGATNRPDIMDP 619



 Score = 37.4 bits (85), Expect(2) = 2e-09
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDGM  +  V +IGATNR D IDP
Sbjct: 314 LLTLMDGMKERGHVIVIGATNRIDAIDP 341

---

>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 73.2 bits (178), Expect(2) = 5e-17
 Identities = 39/69 (56%), Positives = 46/69 (66%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ I IPLPD + R++IFK   R   LA+D+DL  LAK T+G S ADI  I
Sbjct: 333 PALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAI 392

Query: 421 CQRACKYAI 395
           C  A   AI
Sbjct: 393 CTEAGMMAI 401



 Score = 34.3 bits (77), Expect(2) = 5e-17
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG +    + +I ATNR DI+DP
Sbjct: 306 LLAEMDGFDPLDDIKVIAATNRKDILDP 333

---

>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score = 65.9 bits (159), Expect(2) = 5e-17
 Identities = 31/69 (44%), Positives = 45/69 (65%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PA+LRPGR D+L+++P+P +++R +I K    K  LA DID   LAK T+G S AD+  I
Sbjct: 313 PAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAI 372

Query: 421 CQRACKYAI 395
              A  +A+
Sbjct: 373 ATEAGMFAV 381



 Score = 41.6 bits (96), Expect(2) = 5e-17
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG + +K + II ATNRPD++DP
Sbjct: 286 LLAEMDGFDKRKNIRIIAATNRPDVLDP 313

---

>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 68.6 bits (166), Expect(2) = 6e-17
 Identities = 32/68 (47%), Positives = 44/68 (64%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + + LPD+  R QI K  +RK PL+KD+D   +A+ T GFS AD+  +
Sbjct: 305 PALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANL 364

Query: 421 CQRACKYA 398
              A  +A
Sbjct: 365 VNEAALFA 372



 Score = 38.5 bits (88), Expect(2) = 6e-17
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG +  + + +I ATNRPD++DP
Sbjct: 278 MLVEMDGFDGNEGIILIAATNRPDVLDP 305

---

>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 68.2 bits (165), Expect(2) = 8e-17
 Identities = 33/68 (48%), Positives = 44/68 (64%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + + LPDV  R QI K  +R+ PLA DID + +A+ T GFS AD+  +
Sbjct: 305 PALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANL 364

Query: 421 CQRACKYA 398
              A  +A
Sbjct: 365 VNEAALFA 372



 Score = 38.5 bits (88), Expect(2) = 8e-17
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG    + + +I ATNRPD++DP
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDP 305

---

>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 68.2 bits (165), Expect(2) = 8e-17
 Identities = 33/68 (48%), Positives = 44/68 (64%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + + LPDV  R QI K  +R+ PLA DID + +A+ T GFS AD+  +
Sbjct: 305 PALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANL 364

Query: 421 CQRACKYA 398
              A  +A
Sbjct: 365 VNEAALFA 372



 Score = 38.5 bits (88), Expect(2) = 8e-17
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG    + + +I ATNRPD++DP
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDP 305

---

>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 68.2 bits (165), Expect(2) = 8e-17
 Identities = 33/68 (48%), Positives = 44/68 (64%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + + LPDV  R QI K  +R+ PLA DID + +A+ T GFS AD+  +
Sbjct: 305 PALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANL 364

Query: 421 CQRACKYA 398
              A  +A
Sbjct: 365 VNEAALFA 372



 Score = 38.5 bits (88), Expect(2) = 8e-17
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG    + + +I ATNRPD++DP
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDP 305

---

>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 68.2 bits (165), Expect(2) = 8e-17
 Identities = 33/68 (48%), Positives = 44/68 (64%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + + LPDV  R QI K  +R+ PLA DID + +A+ T GFS AD+  +
Sbjct: 305 PALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANL 364

Query: 421 CQRACKYA 398
              A  +A
Sbjct: 365 VNEAALFA 372



 Score = 38.5 bits (88), Expect(2) = 8e-17
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG    + + +I ATNRPD++DP
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDP 305

---

>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 68.2 bits (165), Expect(2) = 8e-17
 Identities = 33/68 (48%), Positives = 44/68 (64%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + + LPDV  R QI K  +R+ PLA DID + +A+ T GFS AD+  +
Sbjct: 305 PALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANL 364

Query: 421 CQRACKYA 398
              A  +A
Sbjct: 365 VNEAALFA 372



 Score = 38.5 bits (88), Expect(2) = 8e-17
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG    + + +I ATNRPD++DP
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDP 305

---

>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 67.0 bits (162), Expect(2) = 1e-16
 Identities = 33/68 (48%), Positives = 43/68 (63%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ I+IP PDV  R++I K   R   LAKD+DL  +A+ T GF+ AD+  +
Sbjct: 309 PALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENL 368

Query: 421 CQRACKYA 398
              A   A
Sbjct: 369 LNEAALLA 376



 Score = 39.3 bits (90), Expect(2) = 1e-16
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG +    + +I ATNRPDI+DP
Sbjct: 282 LLVEMDGFDTSDGIIVIAATNRPDILDP 309

---

>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 67.0 bits (162), Expect(2) = 1e-16
 Identities = 32/68 (47%), Positives = 44/68 (64%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + + LPDV  R QI K  +RK PL++D+D   +A+ T GFS AD+  +
Sbjct: 305 PALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANL 364

Query: 421 CQRACKYA 398
              A  +A
Sbjct: 365 VNEAALFA 372



 Score = 38.9 bits (89), Expect(2) = 1e-16
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG +  + V +I ATNRPD++DP
Sbjct: 278 MLVEMDGFDGNEGVILIAATNRPDVLDP 305

---

>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score = 67.4 bits (163), Expect(2) = 2e-16
 Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PALLRPGR D+LIY+P PD  +R +I K   +  PLA+D+ L  +A+  +G++ AD+  +
Sbjct: 639  PALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEAL 698

Query: 421  CQRACKYAIXXXXX-----XXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARR 257
             + A   A+                                   ++    FE+++   + 
Sbjct: 699  VREATINAMRSIYSMCDKQSRDECKGNMECYQKHIKECMNKTSFKVSKEDFEKALNVVKA 758

Query: 256  SVSDADIRKYQAFAQTLQQS 197
            S++ ADI++Y+ F++ L+++
Sbjct: 759  SLTQADIQRYERFSKELKRA 778



 Score = 56.6 bits (135), Expect(2) = 5e-14
 Identities = 28/69 (40%), Positives = 39/69 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL RPGR D+ I I  PD   R  I +   R  P+  D+DL  LA+ T G++ AD+  +
Sbjct: 363 PALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAAL 422

Query: 421 CQRACKYAI 395
            + A  YA+
Sbjct: 423 AKEAAIYAL 431



 Score = 40.4 bits (93), Expect(2) = 5e-14
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+  +  V +IGATNRPD IDP
Sbjct: 336 LLTLMDGIKGRGRVIVIGATNRPDAIDP 363



 Score = 38.1 bits (87), Expect(2) = 2e-16
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG+     V II ATNRPDI+DP
Sbjct: 612 LLAEMDGIVPLNKVVIIAATNRPDILDP 639

---

>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score = 61.2 bits (147), Expect(2) = 3e-16
 Identities = 31/69 (44%), Positives = 43/69 (62%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PA+LRPGR D++I +P PD   R +I K   RK  LA+D++L  +AK T+G   A++  I
Sbjct: 324 PAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAI 383

Query: 421 CQRACKYAI 395
           C  A   AI
Sbjct: 384 CTEAGMNAI 392



 Score = 43.5 bits (101), Expect(2) = 3e-16
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG +A+  V IIGATNRPDI+DP
Sbjct: 297 LLAEMDGFDARGDVKIIGATNRPDILDP 324

---

>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score = 64.7 bits (156), Expect(2) = 8e-16
 Identities = 32/69 (46%), Positives = 43/69 (62%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ I +PLP+ D R +I K       LA+++D+  LA+ T G S AD+  I
Sbjct: 305 PALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAI 364

Query: 421 CQRACKYAI 395
           C  A  +AI
Sbjct: 365 CTEAGMFAI 373



 Score = 38.5 bits (88), Expect(2) = 8e-16
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL E+DG  ++  V I+ ATNRPDI+DP
Sbjct: 278 LLAELDGFESRGNVGIVAATNRPDILDP 305

---

>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 62.8 bits (151), Expect(2) = 2e-15
 Identities = 34/69 (49%), Positives = 45/69 (65%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+LI +PLPD + R +I K   R+  L K +DL A+A+ T+G S AD+  I
Sbjct: 294 PALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAI 352

Query: 421 CQRACKYAI 395
              A  +AI
Sbjct: 353 ATEAGMFAI 361



 Score = 39.3 bits (90), Expect(2) = 2e-15
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG + +  V +I ATNRPDI+DP
Sbjct: 267 LLAEMDGFDPRGNVKVIAATNRPDILDP 294

---

>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 63.2 bits (152), Expect(2) = 2e-15
 Identities = 30/68 (44%), Positives = 42/68 (61%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL RPGR D+ + + LPDV  R QI K  +RK  +A+D+D   LA+ T G+S AD+  +
Sbjct: 304 PALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANL 363

Query: 421 CQRACKYA 398
              A  +A
Sbjct: 364 VNEAALFA 371



 Score = 38.5 bits (88), Expect(2) = 2e-15
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG +    V +I ATNRPD++DP
Sbjct: 277 MLVEMDGFSGNDGVIVIAATNRPDVLDP 304

---

>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 68.2 bits (165), Expect(2) = 2e-15
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D++I +PLPD   R +IF   L+K  +  +I+L  L++ T+GFS ADI  +
Sbjct: 288 PALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNV 347

Query: 421 CQRACKYAI 395
           C  A   AI
Sbjct: 348 CVEAAYMAI 356



 Score = 33.5 bits (75), Expect(2) = 2e-15
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL E+DG +    V II ATNR DI+DP
Sbjct: 261 LLAELDGFDPLDNVKIIAATNRIDILDP 288

---

>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 63.2 bits (152), Expect(2) = 2e-15
 Identities = 30/68 (44%), Positives = 42/68 (61%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL RPGR D+ + + LPDV  R QI K  +RK  +A+D+D   LA+ T G+S AD+  +
Sbjct: 50  PALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANL 109

Query: 421 CQRACKYA 398
              A  +A
Sbjct: 110 VNEAALFA 117



 Score = 38.5 bits (88), Expect(2) = 2e-15
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG +    V +I ATNRPD++DP
Sbjct: 23  MLVEMDGFSGNDGVIVIAATNRPDVLDP 50

---

>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 62.0 bits (149), Expect(2) = 3e-15
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+LI +PLPD + R +I K   R+  L K++DL  +A+ T+G S AD+  I
Sbjct: 294 PALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAI 352

Query: 421 CQRACKYAI 395
              A  +AI
Sbjct: 353 ATEAGMFAI 361



 Score = 39.3 bits (90), Expect(2) = 3e-15
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG + +  V +I ATNRPDI+DP
Sbjct: 267 LLAEMDGFDPRGNVKVIAATNRPDILDP 294

---

>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 62.0 bits (149), Expect(2) = 5e-15
 Identities = 28/68 (41%), Positives = 43/68 (63%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ I++ LPD+  R +I +  ++K PL  ++D   +A+ T GFS AD+  +
Sbjct: 305 PALLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANL 364

Query: 421 CQRACKYA 398
              A  +A
Sbjct: 365 VNEAALFA 372



 Score = 38.5 bits (88), Expect(2) = 5e-15
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG +  + + +I ATNRPD++DP
Sbjct: 278 MLVEMDGFDGNEGIILIAATNRPDVLDP 305

---

>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score = 61.2 bits (147), Expect(2) = 5e-15
 Identities = 34/69 (49%), Positives = 43/69 (62%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+LI +PLPD   R +I K   RK  L K +DL  +A+ T+G S AD+  I
Sbjct: 292 PALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAI 350

Query: 421 CQRACKYAI 395
              A  +AI
Sbjct: 351 ATEAGMFAI 359



 Score = 39.3 bits (90), Expect(2) = 5e-15
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG + +  V +I ATNRPDI+DP
Sbjct: 265 LLAEMDGFDPRGNVKVIAATNRPDILDP 292

---

>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score = 59.7 bits (143), Expect(2) = 2e-14
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+LI +PLPD + R +I K   R+  L + +DL  +A+ T+G S AD+  I
Sbjct: 291 PALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAI 349

Query: 421 CQRACKYAI 395
              A  +AI
Sbjct: 350 ATEAGMFAI 358



 Score = 39.3 bits (90), Expect(2) = 2e-14
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG + +  V +I ATNRPDI+DP
Sbjct: 264 LLAEMDGFDPRGNVKVIAATNRPDILDP 291

---

>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 59.3 bits (142), Expect(2) = 3e-14
 Identities = 29/68 (42%), Positives = 39/68 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ I +  PDV+ R ++ K   R  PL  D++L  +A  T GFS AD+  +
Sbjct: 319 PALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENL 378

Query: 421 CQRACKYA 398
              A   A
Sbjct: 379 LNEAALVA 386



 Score = 38.9 bits (89), Expect(2) = 3e-14
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG +A + + II ATNR DI+DP
Sbjct: 292 LLVEMDGFSANEGIIIIAATNRADILDP 319

---

>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 57.4 bits (137), Expect(2) = 5e-14
 Identities = 34/72 (47%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLR----KSPLAKDIDLSALAKYTQGFSVAD 434
           PALLRPGR D+ I+I  PD+  R  IFK  LR     S L KD     LA  T GFS AD
Sbjct: 460 PALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGAD 519

Query: 433 ITEICQRACKYA 398
           +  +C  A   A
Sbjct: 520 VANVCNEAALIA 531



 Score = 39.7 bits (91), Expect(2) = 5e-14
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG N    V I+  TNRPDI+DP
Sbjct: 433 LLVEMDGFNTTTNVVILAGTNRPDILDP 460

---

>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 57.4 bits (137), Expect(2) = 5e-14
 Identities = 34/72 (47%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLR----KSPLAKDIDLSALAKYTQGFSVAD 434
           PALLRPGR D+ I+I  PD+  R  IFK  LR     S L KD     LA  T GFS AD
Sbjct: 461 PALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGAD 520

Query: 433 ITEICQRACKYA 398
           +  +C  A   A
Sbjct: 521 VANVCNEAALIA 532



 Score = 39.7 bits (91), Expect(2) = 5e-14
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG N    V I+  TNRPDI+DP
Sbjct: 434 LLVEMDGFNTTTNVVILAGTNRPDILDP 461

---

>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 63.9 bits (154), Expect(2) = 6e-14
 Identities = 32/69 (46%), Positives = 45/69 (65%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PA+LRPGR D++I +PLP +  R +I     RK+ +A D+DL A+AK T+GFS AD+  +
Sbjct: 293 PAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAV 352

Query: 421 CQRACKYAI 395
              A   AI
Sbjct: 353 VVEAGYNAI 361



 Score = 33.1 bits (74), Expect(2) = 6e-14
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL E+DG +    V +I ATNR D+IDP
Sbjct: 266 LLAELDGFDPLDNVKVIAATNRLDLIDP 293

---

>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 56.2 bits (134), Expect(2) = 2e-13
 Identities = 33/72 (45%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLR----KSPLAKDIDLSALAKYTQGFSVAD 434
           PAL RPGR D+ IYI  PD+  R  IFK  LR       L+KD     LA  T GF+ AD
Sbjct: 327 PALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGAD 386

Query: 433 ITEICQRACKYA 398
           I+ +C  A   A
Sbjct: 387 ISNVCNEAALIA 398



 Score = 39.3 bits (90), Expect(2) = 2e-13
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG N+   V ++  TNRPDI+DP
Sbjct: 300 MLVEMDGFNSSTNVVVLAGTNRPDILDP 327

---

>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 59.7 bits (143), Expect(2) = 2e-13
 Identities = 29/68 (42%), Positives = 39/68 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + +  PDV  R  I K   +  PLA+D+DL  +A+ T GF  AD+  +
Sbjct: 340 PALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENV 399

Query: 421 CQRACKYA 398
              A   A
Sbjct: 400 LNEAALVA 407



 Score = 35.8 bits (81), Expect(2) = 2e-13
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG    + + +I ATNR D++DP
Sbjct: 313 LLIEMDGFEGNEGIIVIAATNRSDVLDP 340

---

>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 59.7 bits (143), Expect(2) = 2e-13
 Identities = 29/68 (42%), Positives = 39/68 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + +  PDV  R  I K   +  PLA+D+DL  +A+ T GF  AD+  +
Sbjct: 340 PALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENV 399

Query: 421 CQRACKYA 398
              A   A
Sbjct: 400 LNEAALVA 407



 Score = 35.8 bits (81), Expect(2) = 2e-13
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG    + + +I ATNR D++DP
Sbjct: 313 LLIEMDGFEGNEGIIVIAATNRSDVLDP 340

---

>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 55.8 bits (133), Expect(2) = 4e-12
 Identities = 31/69 (44%), Positives = 40/69 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL RPGR D+ I I +PD   R +I K   R  PL+ D++LS LA  T GF  ADI  +
Sbjct: 340 PALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESL 399

Query: 421 CQRACKYAI 395
            + A   A+
Sbjct: 400 SKEAAMRAL 408



 Score = 53.1 bits (126), Expect(2) = 2e-13
 Identities = 34/137 (24%), Positives = 59/137 (43%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+R GR D+L+ +  P ++ R QI K   + +PLA D+ L  LA+   G+  +D+  I
Sbjct: 614 PALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANI 673

Query: 421 CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
            + A   A+                              ++  AHF  +M+  R +++D 
Sbjct: 674 AREAAIEAL-----------------------RDDEDADDVGMAHFRAAMENVRPTITDD 710

Query: 241 DIRKYQAFAQTLQQSRG 191
            +  Y       + S+G
Sbjct: 711 LMEYYDQVEDQFKGSQG 727



 Score = 42.0 bits (97), Expect(2) = 2e-13
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTE+DG+   + V +I ATNRPDIIDP
Sbjct: 587 LLTELDGLEEMEEVMVIAATNRPDIIDP 614



 Score = 35.0 bits (79), Expect(2) = 4e-12
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDG+  +  V +I ATNR D +DP
Sbjct: 313 LLTMMDGLEGRGQVIVIAATNRVDAVDP 340

---

>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score = 62.4 bits (150), Expect(2) = 2e-13
 Identities = 32/69 (46%), Positives = 43/69 (62%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+LI +PLP+ + R +IF+  L+K     +I    LA  T+GFS A+I  +
Sbjct: 288 PALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNV 347

Query: 421 CQRACKYAI 395
           C  A   AI
Sbjct: 348 CTEAGYIAI 356



 Score = 32.7 bits (73), Expect(2) = 2e-13
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL E+DG      V II ATNR DI+DP
Sbjct: 261 LLAEIDGFKPLDNVKIIAATNRLDILDP 288

---

>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome|
            biogenesis disorder protein 1)
          Length = 1283

 Score = 57.0 bits (136), Expect(2) = 3e-13
 Identities = 29/64 (45%), Positives = 37/64 (57%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PALLRPGRLD+ +Y P PD  SR +I        PLA D+DL  +A  T  F+ AD+  +
Sbjct: 991  PALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKAL 1050

Query: 421  CQRA 410
               A
Sbjct: 1051 LYNA 1054



 Score = 37.7 bits (86), Expect(2) = 3e-13
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = -3

Query: 683  LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
            LLT++DG+   + V+++ AT+RPD+IDP
Sbjct: 964  LLTQLDGVEGLQGVYVLAATSRPDLIDP 991

---

>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like|
            protein) (NVLp)
          Length = 855

 Score = 47.4 bits (111), Expect(2) = 4e-13
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLR---KSPLAKDIDLSALAK--YTQGFSVA 437
            PA+LRPGRLD+ +++ LP    R  I K   +   K PL +D++L  +A       ++ A
Sbjct: 731  PAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGA 790

Query: 436  DITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARR 257
            D+T + + A   A+                              ++   HFE++ K  + 
Sbjct: 791  DLTALVREASLCALRQEI--------------TAQKNGVGAGELKVSHKHFEDAFKKVKP 836

Query: 256  SVSDADIRKYQAFAQTLQQ 200
            S+S  D   Y+A  ++L Q
Sbjct: 837  SISIKDQVMYEALQRSLSQ 855



 Score = 46.6 bits (109), Expect(2) = 4e-13
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTEMDG+  ++ VFI+ ATNRPDIIDP
Sbjct: 704 LLTEMDGLETRQQVFILAATNRPDIIDP 731



 Score = 46.2 bits (108), Expect(2) = 4e-09
 Identities = 24/69 (34%), Positives = 37/69 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ + + +PD  +R +I +   RK  L +  +   LA  T GF  AD+  +
Sbjct: 417 PALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMAL 476

Query: 421 CQRACKYAI 395
           C+ A   A+
Sbjct: 477 CREAAMCAV 485



 Score = 34.3 bits (77), Expect(2) = 4e-09
 Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
 Frame = -3

Query: 683 LLTEMDGMN---AKKTVFIIGATNRPDIIDP 600
           LLT MD +N   A   V +IGATNRPD +DP
Sbjct: 387 LLTCMDDLNNVAATARVLVIGATNRPDSLDP 417

---

>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score = 59.7 bits (143), Expect(2) = 4e-13
 Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK-SPLAKDIDLSALAKYTQGFSVADITEI 422
           ALLRPGRLD+ IY+  PDV++R +I K C +K +     +DL  LA  T+G+S A++  +
Sbjct: 668 ALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLL 727

Query: 421 CQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDA 242
           CQ A   AI                              ++   HFE++ K   R ++  
Sbjct: 728 CQEAGLAAI-----------------------MEDLDVAKVELRHFEKAFKGIARGITPE 764

Query: 241 DIRKYQAFA 215
            +  Y+ FA
Sbjct: 765 MLSYYEEFA 773



 Score = 45.1 bits (105), Expect(2) = 1e-09
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIF-KACLRKSPLAKDIDLSA---LAKYTQGFSVAD 434
           PAL RPGR DQ + I +PDVD+R  I  K   R S     +D  A   +A  T G+  AD
Sbjct: 397 PALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGAD 456

Query: 433 ITEICQRA 410
           +T +C+ +
Sbjct: 457 LTALCRES 464



 Score = 37.0 bits (84), Expect(2) = 1e-09
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT MDGM A   V +I ATNRP+ +DP
Sbjct: 370 LLTLMDGMGAAGKVVVIAATNRPNSVDP 397



 Score = 34.3 bits (77), Expect(2) = 4e-13
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL E+DG+   K V I+ ATNRPD ID
Sbjct: 640 LLNEIDGVEELKGVVIVAATNRPDEID 666

---

>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 55.1 bits (131), Expect(2) = 4e-13
 Identities = 28/68 (41%), Positives = 38/68 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ I +  PDV  R  + K   R  PL + ++L ++A  T GFS AD+  +
Sbjct: 314 PALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENL 373

Query: 421 CQRACKYA 398
              A   A
Sbjct: 374 LNEAALVA 381



 Score = 38.9 bits (89), Expect(2) = 4e-13
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG +A + + II ATNR DI+DP
Sbjct: 287 LLVEMDGFSANEGIIIIAATNRADILDP 314

---

>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score = 53.9 bits (128), Expect(2) = 5e-13
 Identities = 29/69 (42%), Positives = 40/69 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PA+LRPGR D++I I +PD D R +I K    K  L K +DL  +AK  +    AD+  +
Sbjct: 302 PAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAV 360

Query: 421 CQRACKYAI 395
           C  A  +AI
Sbjct: 361 CTEAGMFAI 369



 Score = 40.0 bits (92), Expect(2) = 5e-13
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG +++  V II ATNRPDI+DP
Sbjct: 275 LLAEMDGFDSRGDVKIIAATNRPDILDP 302

---

>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 856

 Score = 49.3 bits (116), Expect(2) = 5e-10
 Identities = 27/69 (39%), Positives = 37/69 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL R GR D+ I + +PD  SR +I +   RK  L +  D   LA  T GF  AD+  +
Sbjct: 418 PALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMAL 477

Query: 421 CQRACKYAI 395
           C+ A   A+
Sbjct: 478 CREAAMCAV 486



 Score = 47.8 bits (112), Expect(2) = 7e-13
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTEMDG+ A++ VFI+ ATNRPDIIDP
Sbjct: 705 LLTEMDGLEARQQVFIMAATNRPDIIDP 732



 Score = 45.4 bits (106), Expect(2) = 7e-13
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLR---KSPLAKDIDLSALA--KYTQGFSVA 437
            PA+LRPGRLD+ +++ LP    R  I K   +   K PL  D++L A+A       ++ A
Sbjct: 732  PAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGA 791

Query: 436  DITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARR 257
            D++ + + A   A+                              ++   HFEE+ K  R 
Sbjct: 792  DLSALVREASICALRQEM--------------ARQKSGNEKGELKVSHKHFEEAFKKVRS 837

Query: 256  SVSDADIRKYQAFAQTLQQ 200
            S+S  D   Y+   ++L +
Sbjct: 838  SISKKDQIMYERLQESLSR 856



 Score = 34.3 bits (77), Expect(2) = 5e-10
 Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
 Frame = -3

Query: 683 LLTEMDGMN---AKKTVFIIGATNRPDIIDP 600
           LLT MD +N   A   V +IGATNRPD +DP
Sbjct: 388 LLTCMDDLNNVAATARVLVIGATNRPDSLDP 418

---

>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7|
          Length = 837

 Score = 48.1 bits (113), Expect(2) = 1e-12
 Identities = 19/28 (67%), Positives = 26/28 (92%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTE+DG+N ++ +F+IGATNRPD+IDP
Sbjct: 657 LLTELDGLNDRRGIFVIGATNRPDMIDP 684



 Score = 44.7 bits (104), Expect(2) = 1e-12
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK--SPLAKDIDLSALAKYTQ--GFSVAD 434
           PA+LRPGRLD+ ++I LP+ + +  I K   +   +PL+ D+D   + +  +   FS AD
Sbjct: 684 PAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGAD 743

Query: 433 ITEICQRACKYAI 395
           +  + + +   A+
Sbjct: 744 LAALVRESSVLAL 756



 Score = 35.8 bits (81), Expect(2) = 6e-06
 Identities = 25/68 (36%), Positives = 33/68 (48%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           AL R GR D+ I + +P+  SR  I K       +   ID + LAK T GF  AD+  + 
Sbjct: 362 ALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALV 421

Query: 418 QRACKYAI 395
             A   AI
Sbjct: 422 TAAGTCAI 429



 Score = 33.9 bits (76), Expect(2) = 6e-06
 Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
 Frame = -3

Query: 683 LLTEMDGMNAKKT----VFIIGATNRPDIID 603
           LLT MD +  +KT    V IIGATNRPD +D
Sbjct: 330 LLTSMDELTMEKTNGKPVIIIGATNRPDSLD 360

---

>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score = 54.3 bits (129), Expect(2) = 1e-12
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D++I + LPD+  R +I K   +   L+K+I    +AK T G+S A +  +
Sbjct: 365 PALLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENV 424

Query: 421 CQRA 410
              A
Sbjct: 425 INEA 428



 Score = 38.5 bits (88), Expect(2) = 1e-12
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           +L EMDG+N    + I+GATNR D++DP
Sbjct: 338 ILVEMDGINENAGILIMGATNRTDVLDP 365

---

>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score = 59.7 bits (143), Expect(2) = 1e-12
 Identities = 32/69 (46%), Positives = 41/69 (59%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ I I LP+  SR +I K    K     +ID  A+ K + GFS AD+  +
Sbjct: 304 PALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNV 363

Query: 421 CQRACKYAI 395
           C  A  +AI
Sbjct: 364 CTEAGMFAI 372



 Score = 32.7 bits (73), Expect(2) = 1e-12
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG ++   V +I ATNRPD +DP
Sbjct: 277 LLNQLDGFDSLGKVKVIMATNRPDTLDP 304

---

>TBP7_YEAST (P40340) TAT-binding homolog 7|
          Length = 1379

 Score = 52.8 bits (125), Expect(2) = 2e-12
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK--SPLAKDIDLSALAKYTQGFSVADIT 428
           PAL RPGR D+  Y PLPDV +R +I +   RK  SPL+ +  +  LA  T+G+  AD+ 
Sbjct: 569 PALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNF-IDKLAFLTKGYGGADLR 627

Query: 427 EICQRACKYAI 395
            +C  A   +I
Sbjct: 628 SLCTEAALISI 638



 Score = 39.3 bits (90), Expect(2) = 2e-12
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL  MDGM+ +  V +IGATNRPD +DP
Sbjct: 542 LLALMDGMDNRGQVIVIGATNRPDAVDP 569

---

>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 53.1 bits (126), Expect(2) = 2e-12
 Identities = 26/64 (40%), Positives = 36/64 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ I +  PD+  R  + +   +  P+A D DL  LAK T G + AD+  +
Sbjct: 316 PALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLANV 375

Query: 421 CQRA 410
              A
Sbjct: 376 VNEA 379



 Score = 38.9 bits (89), Expect(2) = 2e-12
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG   +  V +I ATNRPDI+DP
Sbjct: 289 LLVEMDGFGDRAGVILIAATNRPDILDP 316

---

>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 53.1 bits (126), Expect(2) = 2e-12
 Identities = 26/64 (40%), Positives = 36/64 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ I +  PD+  R  + +   +  P+A D DL  LAK T G + AD+  +
Sbjct: 316 PALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANV 375

Query: 421 CQRA 410
              A
Sbjct: 376 INEA 379



 Score = 38.9 bits (89), Expect(2) = 2e-12
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG   +  V +I ATNRPDI+DP
Sbjct: 289 LLVEMDGFGDRAGVILIAATNRPDILDP 316

---

>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 53.1 bits (126), Expect(2) = 2e-12
 Identities = 26/64 (40%), Positives = 36/64 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ I +  PD+  R  + +   +  P+A D DL  LAK T G + AD+  +
Sbjct: 316 PALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANV 375

Query: 421 CQRA 410
              A
Sbjct: 376 INEA 379



 Score = 38.9 bits (89), Expect(2) = 2e-12
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG   +  V +I ATNRPDI+DP
Sbjct: 289 LLVEMDGFGDRAGVILIAATNRPDILDP 316

---

>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory
           particle triple-A ATPase subunit 1a)
          Length = 426

 Score = 59.3 bits (142), Expect(2) = 2e-12
 Identities = 32/69 (46%), Positives = 40/69 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ +   LPD++SR QIFK   R     +DI    LA+     + ADI  +
Sbjct: 322 PALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSV 381

Query: 421 CQRACKYAI 395
           C  A  YAI
Sbjct: 382 CTEAGMYAI 390



 Score = 32.7 bits (73), Expect(2) = 2e-12
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           ++ ++DG +A+  + ++ ATNRPD +DP
Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDP 322

---

>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 425

 Score = 59.3 bits (142), Expect(2) = 2e-12
 Identities = 32/69 (46%), Positives = 40/69 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ +   LPD++SR QIFK   R     +DI    LA+     + ADI  +
Sbjct: 321 PALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSV 380

Query: 421 CQRACKYAI 395
           C  A  YAI
Sbjct: 381 CTEAGMYAI 389



 Score = 32.7 bits (73), Expect(2) = 2e-12
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           ++ ++DG +A+  + ++ ATNRPD +DP
Sbjct: 294 IVNQLDGFDARGNIKVLMATNRPDTLDP 321

---

>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 52.4 bits (124), Expect(2) = 2e-12
 Identities = 28/63 (44%), Positives = 35/63 (55%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ + + LPD   R  I K   R  PL +D+ L  LA  T GFS AD+  + 
Sbjct: 340 ALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLL 399

Query: 418 QRA 410
             A
Sbjct: 400 NEA 402



 Score = 39.3 bits (90), Expect(2) = 2e-12
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG    K V ++GATNR DI+D
Sbjct: 312 LLTEMDGFKENKGVIVVGATNRADILD 338

---

>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog|
          Length = 413

 Score = 60.8 bits (146), Expect(2) = 2e-12
 Identities = 30/69 (43%), Positives = 39/69 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ I  PLPD   +  +F+ C  K  L  ++DL          S A+IT I
Sbjct: 314 PALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAI 373

Query: 421 CQRACKYAI 395
           CQ A  +A+
Sbjct: 374 CQEAGMHAV 382



 Score = 30.8 bits (68), Expect(2) = 2e-12
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNR D +DP
Sbjct: 287 LLNQMDGFDQTVNVKVIMATNRADTLDP 314

---

>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 55.1 bits (131), Expect(2) = 4e-12
 Identities = 26/69 (37%), Positives = 40/69 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + +  PD+  R  I +   +   LA ++DL A+A+ T G+S AD+  +
Sbjct: 293 PALLRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANV 352

Query: 421 CQRACKYAI 395
              A   A+
Sbjct: 353 VNEAALLAV 361



 Score = 35.8 bits (81), Expect(2) = 4e-12
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL EMDG +    + ++ ATNRPD++DP
Sbjct: 266 LLVEMDGFDNTTGLILLAATNRPDVLDP 293

---

>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score = 52.4 bits (124), Expect(2) = 5e-12
 Identities = 26/63 (41%), Positives = 36/63 (57%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ + +  PDV  R QI K   R   + KD+D   +A+ T GF+ AD+  + 
Sbjct: 404 ALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLM 463

Query: 418 QRA 410
             A
Sbjct: 464 NEA 466



 Score = 38.1 bits (87), Expect(2) = 5e-12
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG +    V ++ ATNRPD++D
Sbjct: 376 LLTEMDGFSGNSGVIVLAATNRPDVLD 402

---

>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score = 56.2 bits (134), Expect(2) = 5e-12
 Identities = 28/68 (41%), Positives = 38/68 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + +  PD   R +I K  ++   LA D+DL  +AK T G + AD+  I
Sbjct: 331 PALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANI 390

Query: 421 CQRACKYA 398
              A   A
Sbjct: 391 INEAALLA 398



 Score = 34.3 bits (77), Expect(2) = 5e-12
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = -3

Query: 683 LLTEMDGMNAKKT-VFIIGATNRPDIIDP 600
           LL EMDG  ++   V ++ ATNRP+I+DP
Sbjct: 303 LLAEMDGFGSENAPVIVLAATNRPEILDP 331

---

>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 57.8 bits (138), Expect(2) = 5e-12
 Identities = 31/69 (44%), Positives = 39/69 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ +   LPD++ R QIFK   R     +DI    LA+     + ADI  +
Sbjct: 322 PALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSV 381

Query: 421 CQRACKYAI 395
           C  A  YAI
Sbjct: 382 CTEAGMYAI 390



 Score = 32.7 bits (73), Expect(2) = 5e-12
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           ++ ++DG +A+  + ++ ATNRPD +DP
Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDP 322

---

>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 57.8 bits (138), Expect(2) = 5e-12
 Identities = 31/69 (44%), Positives = 39/69 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ +   LPD++ R QIFK   R     +DI    LA+     + ADI  +
Sbjct: 322 PALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSV 381

Query: 421 CQRACKYAI 395
           C  A  YAI
Sbjct: 382 CTEAGMYAI 390



 Score = 32.7 bits (73), Expect(2) = 5e-12
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           ++ ++DG +A+  + ++ ATNRPD +DP
Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDP 322

---

>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome|
           AAA-ATPase subunit RPT3) (Regulatory particle triple-A
           ATPase subunit 3)
          Length = 408

 Score = 59.3 bits (142), Expect(2) = 6e-12
 Identities = 29/69 (42%), Positives = 39/69 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ I  PLPD   +  +F+ C  K  L+ ++DL          S A+I  I
Sbjct: 309 PALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAI 368

Query: 421 CQRACKYAI 395
           CQ A  +A+
Sbjct: 369 CQEAGMHAV 377



 Score = 30.8 bits (68), Expect(2) = 6e-12
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNR D +DP
Sbjct: 282 LLNQMDGFDQTVNVKVIMATNRADTLDP 309

---

>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 57.0 bits (136), Expect(2) = 6e-12
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAK--DIDLSALAKYTQGFSVADIT 428
           PALLRPGRLD+ I+I LP+  +R  I K  +   P+ K  +ID  A+ K + GF+ AD+ 
Sbjct: 287 PALLRPGRLDRKIHIDLPNEQARLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLR 344

Query: 427 EICQRACKYAI 395
            +C  A  +AI
Sbjct: 345 NVCTEAGMFAI 355



 Score = 33.1 bits (74), Expect(2) = 6e-12
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNRPD +DP
Sbjct: 260 LLNQMDGFDTLHRVKMIMATNRPDTLDP 287

---

>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 57.0 bits (136), Expect(2) = 6e-12
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAK--DIDLSALAKYTQGFSVADIT 428
           PALLRPGRLD+ I+I LP+  +R  I K  +   P+ K  +ID  A+ K + GF+ AD+ 
Sbjct: 287 PALLRPGRLDRKIHIDLPNEQARLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLR 344

Query: 427 EICQRACKYAI 395
            +C  A  +AI
Sbjct: 345 NVCTEAGMFAI 355



 Score = 33.1 bits (74), Expect(2) = 6e-12
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNRPD +DP
Sbjct: 260 LLNQMDGFDTLHRVKMIMATNRPDTLDP 287

---

>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 57.0 bits (136), Expect(2) = 6e-12
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAK--DIDLSALAKYTQGFSVADIT 428
           PALLRPGRLD+ I+I LP+  +R  I K  +   P+ K  +ID  A+ K + GF+ AD+ 
Sbjct: 287 PALLRPGRLDRKIHIDLPNEQARLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLR 344

Query: 427 EICQRACKYAI 395
            +C  A  +AI
Sbjct: 345 NVCTEAGMFAI 355



 Score = 33.1 bits (74), Expect(2) = 6e-12
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNRPD +DP
Sbjct: 260 LLNQMDGFDTLHRVKMIMATNRPDTLDP 287

---

>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score = 51.2 bits (121), Expect(2) = 1e-11
 Identities = 25/63 (39%), Positives = 37/63 (58%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPG+ D+ + +  PDV  R +I +   R   LAKD+D   +A+ T GF+ AD+  + 
Sbjct: 384 ALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLM 443

Query: 418 QRA 410
             A
Sbjct: 444 NEA 446



 Score = 38.1 bits (87), Expect(2) = 1e-11
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG +    V ++ ATNRPD++D
Sbjct: 356 LLTEMDGFSGNSGVIVLAATNRPDVLD 382

---

>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score = 54.3 bits (129), Expect(2) = 1e-11
 Identities = 23/63 (36%), Positives = 41/63 (65%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           AL+RPGR D ++Y+P PD+++R +I +   R   L  D+DL  +A+ T  F+ A++  +C
Sbjct: 442 ALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLC 501

Query: 418 QRA 410
           + +
Sbjct: 502 RES 504



 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = -1

Query: 649 KPSSS-----LVLPTGQT-S*TPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAK 488
           KPSSS     +V  T +  +  PAL R GR D L+ +  P+ + R +I +   +K  L  
Sbjct: 157 KPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDP 216

Query: 487 DIDLSALAKYTQGFSVADITEICQRA 410
            +DL A+A    G+  AD+  +C+ A
Sbjct: 217 SVDLQAIAISCNGYVGADLEALCREA 242



 Score = 35.0 bits (79), Expect(2) = 1e-11
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG+   K + ++ ATNRP  ID
Sbjct: 414 LLTEMDGLEEAKGILVLAATNRPYAID 440

---

>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog|
          Length = 387

 Score = 57.4 bits (137), Expect(2) = 1e-11
 Identities = 30/69 (43%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ I  PLPD   +  +F A   K  L   +D+ +L    +  S ADI  I
Sbjct: 288 PALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSI 347

Query: 421 CQRACKYAI 395
           CQ A   A+
Sbjct: 348 CQEAGMLAV 356



 Score = 32.0 bits (71), Expect(2) = 1e-11
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNR D IDP
Sbjct: 261 LLNQMDGFDPAANVKVIMATNRADTIDP 288

---

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score = 50.8 bits (120), Expect(2) = 1e-11
 Identities = 25/63 (39%), Positives = 36/63 (57%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ + +  PDV  R +I +   R   LAKD+D   +A+ T GF+  D+  + 
Sbjct: 407 ALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLM 466

Query: 418 QRA 410
             A
Sbjct: 467 NEA 469



 Score = 38.1 bits (87), Expect(2) = 1e-11
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG +    V ++ ATNRPD++D
Sbjct: 379 LLTEMDGFSGNSGVIVLAATNRPDVLD 405

---

>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 51.2 bits (121), Expect(2) = 1e-11
 Identities = 23/63 (36%), Positives = 37/63 (58%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           AL+RPGR D+ + +  PD   R +I     R   L++D+DL  +A+ T GF+ AD++ + 
Sbjct: 315 ALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLL 374

Query: 418 QRA 410
             A
Sbjct: 375 NEA 377



 Score = 37.7 bits (86), Expect(2) = 1e-11
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG      + I+ ATNRPD++D
Sbjct: 287 LLTEMDGFEGNTGIIIVAATNRPDVLD 313

---

>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)|
           (CIM3 protein) (TAT-binding protein TBY1)
          Length = 405

 Score = 55.1 bits (131), Expect(2) = 1e-11
 Identities = 29/69 (42%), Positives = 41/69 (59%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR+D+ I  P P V +R +I +   RK  L + I+L  +A+   G S AD+  +
Sbjct: 302 PALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGV 361

Query: 421 CQRACKYAI 395
           C  A  YA+
Sbjct: 362 CTEAGMYAL 370



 Score = 33.9 bits (76), Expect(2) = 1e-11
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG    K + II ATNR DI+DP
Sbjct: 275 LLNQLDGFETSKNIKIIMATNRLDILDP 302

---

>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score = 50.4 bits (119), Expect(2) = 2e-11
 Identities = 25/63 (39%), Positives = 36/63 (57%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ + +  PDV  R +I +   R   L KD+D   +A+ T GF+ AD+  + 
Sbjct: 416 ALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLM 475

Query: 418 QRA 410
             A
Sbjct: 476 NEA 478



 Score = 38.1 bits (87), Expect(2) = 2e-11
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG +    V ++ ATNRPD++D
Sbjct: 388 LLTEMDGFSGNSGVIVLAATNRPDVLD 414

---

>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 50.4 bits (119), Expect(2) = 2e-11
 Identities = 22/63 (34%), Positives = 36/63 (57%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           AL+RPGR D+ + +  PD   R +I +   R   LA ++ + ++A+ T GFS AD+  + 
Sbjct: 326 ALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLL 385

Query: 418 QRA 410
             A
Sbjct: 386 NEA 388



 Score = 38.1 bits (87), Expect(2) = 2e-11
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG      + II ATNRPD++D
Sbjct: 298 LLTEMDGFEGNTGIIIIAATNRPDVLD 324

---

>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 56.6 bits (135), Expect(2) = 2e-11
 Identities = 27/68 (39%), Positives = 37/68 (54%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + +  PDV  R  + K   +  PLA D+DL  +A  T G+  AD+  +
Sbjct: 347 PALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENV 406

Query: 421 CQRACKYA 398
              A   A
Sbjct: 407 LNEAALVA 414



 Score = 31.6 bits (70), Expect(2) = 2e-11
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -3

Query: 683 LLTEMDGMNAK-KTVFIIGATNRPDIIDP 600
           LL EMDG      +V +I ATNR D++DP
Sbjct: 319 LLVEMDGFQDDGNSVIVIAATNRSDVLDP 347

---

>PRS8_DROME (O18413) 26S protease regulatory subunit 8|
          Length = 405

 Score = 53.5 bits (127), Expect(2) = 2e-11
 Identities = 28/69 (40%), Positives = 41/69 (59%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR+D+ I  P P+ ++R  I K   RK  L + I+L  +A+   G S A++  +
Sbjct: 302 PALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 361

Query: 421 CQRACKYAI 395
           C  A  YA+
Sbjct: 362 CTEAGMYAL 370



 Score = 34.7 bits (78), Expect(2) = 2e-11
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG  A K + +I ATNR DI+DP
Sbjct: 275 LLNQLDGFEATKNIKVIMATNRIDILDP 302

---

>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)|
          Length = 402

 Score = 53.5 bits (127), Expect(2) = 2e-11
 Identities = 28/69 (40%), Positives = 41/69 (59%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR+D+ I  P P+ ++R  I K   RK  L + I+L  +A+   G S A++  +
Sbjct: 299 PALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 358

Query: 421 CQRACKYAI 395
           C  A  YA+
Sbjct: 359 CTEAGMYAL 367



 Score = 34.7 bits (78), Expect(2) = 2e-11
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG  A K + +I ATNR DI+DP
Sbjct: 272 LLNQLDGFEATKNIKVIMATNRIDILDP 299

---

>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score = 49.7 bits (117), Expect(2) = 3e-11
 Identities = 24/63 (38%), Positives = 36/63 (57%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ + +  PDV  R +I +   R   L KD+D   +A+ T G++ AD+  + 
Sbjct: 407 ALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLM 466

Query: 418 QRA 410
             A
Sbjct: 467 NEA 469



 Score = 38.1 bits (87), Expect(2) = 3e-11
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG +    V ++ ATNRPD++D
Sbjct: 379 LLTEMDGFSGNSGVIVLAATNRPDVLD 405

---

>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 53.5 bits (127), Expect(2) = 3e-11
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGR D+ + +  PD + R +I K  ++   LA D++L  +AK T G + AD+  I
Sbjct: 325 PALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANI 384

Query: 421 CQRACKYA 398
              A   A
Sbjct: 385 INEAALLA 392



 Score = 34.3 bits (77), Expect(2) = 3e-11
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = -3

Query: 683 LLTEMDGMNAKKT-VFIIGATNRPDIIDP 600
           LL EMDG  ++   V ++ ATNRP+I+DP
Sbjct: 297 LLAEMDGFGSENAPVIVLAATNRPEILDP 325

---

>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 53.5 bits (127), Expect(2) = 3e-11
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGR D+ + +  PD + R +I K  ++   LA D++L  +AK T G + AD+  I
Sbjct: 325 PALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANI 384

Query: 421 CQRACKYA 398
              A   A
Sbjct: 385 INEAALLA 392



 Score = 34.3 bits (77), Expect(2) = 3e-11
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = -3

Query: 683 LLTEMDGMNAKKT-VFIIGATNRPDIIDP 600
           LL EMDG  ++   V ++ ATNRP+I+DP
Sbjct: 297 LLAEMDGFGSENAPVIVLAATNRPEILDP 325

---

>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)|
          Length = 403

 Score = 53.1 bits (126), Expect(2) = 3e-11
 Identities = 26/69 (37%), Positives = 41/69 (59%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR+D+ I  P P  ++R +I +   R   L + IDL ++A+   G S A++  +
Sbjct: 300 PALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGV 359

Query: 421 CQRACKYAI 395
           C  A  +A+
Sbjct: 360 CTEAGMFAL 368



 Score = 34.7 bits (78), Expect(2) = 3e-11
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG  A K + +I ATNR DI+DP
Sbjct: 273 LLNQLDGFEATKNIKVIMATNRIDILDP 300

---

>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 50.8 bits (120), Expect(2) = 4e-11
 Identities = 25/68 (36%), Positives = 39/68 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR D+ + +  PD+  R +I +   +K  L K+++L  +A  T GF+ AD+  +
Sbjct: 329 PALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLANL 388

Query: 421 CQRACKYA 398
              A   A
Sbjct: 389 VNEAALLA 396



 Score = 36.6 bits (83), Expect(2) = 4e-11
 Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = -3

Query: 683 LLTEMDGMNAK-KTVFIIGATNRPDIIDP 600
           LLTEMDG +A   TV ++ ATNRP+ +DP
Sbjct: 301 LLTEMDGFSAAGATVIVLAATNRPETLDP 329

---

>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)|
           (Proteasomal cap subunit)
          Length = 437

 Score = 53.9 bits (128), Expect(2) = 4e-11
 Identities = 30/69 (43%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ + IPLP+   R +IFK    K     + D  A  K + GF+ ADI   
Sbjct: 335 PALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNC 394

Query: 421 CQRACKYAI 395
              A  +AI
Sbjct: 395 ATEAGFFAI 403



 Score = 33.5 bits (75), Expect(2) = 4e-11
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT+MDG +      II ATNRPD +DP
Sbjct: 308 LLTQMDGFDNLGQTKIIMATNRPDTLDP 335

---

>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 48.9 bits (115), Expect(2) = 5e-11
 Identities = 23/63 (36%), Positives = 36/63 (57%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ + +  PDV  R  I     +   L +++ L+A+A+ T GF+ AD+  + 
Sbjct: 365 ALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVL 424

Query: 418 QRA 410
             A
Sbjct: 425 NEA 427



 Score = 38.1 bits (87), Expect(2) = 5e-11
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG      + +I ATNRPD++D
Sbjct: 337 LLTEMDGFEGNSGIIVIAATNRPDVLD 363

---

>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 53.1 bits (126), Expect(2) = 5e-11
 Identities = 26/63 (41%), Positives = 38/63 (60%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ I + LP+++ R  I K   +K  + KD+ L  +A+ T GFS AD+  + 
Sbjct: 325 ALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLL 384

Query: 418 QRA 410
             A
Sbjct: 385 NEA 387



 Score = 33.9 bits (76), Expect(2) = 5e-11
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG +    V ++ ATNR D++D
Sbjct: 297 LLTEMDGFSGDTGVIVVAATNRIDVLD 323

---

>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 52.4 bits (124), Expect(2) = 5e-11
 Identities = 27/68 (39%), Positives = 38/68 (55%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ I + +PDV SR  I K    +  L   + L A+A+ T GF+ AD+  + 
Sbjct: 308 ALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLL 367

Query: 418 QRACKYAI 395
             A   A+
Sbjct: 368 NEAAILAV 375



 Score = 34.7 bits (78), Expect(2) = 5e-11
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG      V +I ATNR D++D
Sbjct: 280 LLTEMDGFEGNTGVIVIAATNRVDVLD 306

---

>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding|
           protein homolog 2)
          Length = 448

 Score = 58.9 bits (141), Expect(2) = 5e-11
 Identities = 30/64 (46%), Positives = 38/64 (59%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR+D+ I  PLPD+ +R +IF+    K  LA D++L         FS ADI  I
Sbjct: 347 PALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAI 406

Query: 421 CQRA 410
           C  A
Sbjct: 407 CTEA 410



 Score = 28.1 bits (61), Expect(2) = 5e-11
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG +++  V +I ATNR + +DP
Sbjct: 320 LLNQLDGFDSRGDVKVILATNRIESLDP 347

---

>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding|
           protein homolog 2)
          Length = 403

 Score = 55.1 bits (131), Expect(2) = 6e-11
 Identities = 30/69 (43%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ I  PLPD   +  IF+    K  L+ ++DL          S A+I  I
Sbjct: 304 PALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSI 363

Query: 421 CQRACKYAI 395
           CQ A  +AI
Sbjct: 364 CQEAGMHAI 372



 Score = 31.6 bits (70), Expect(2) = 6e-11
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNR D +DP
Sbjct: 277 LLNQMDGFDVSVNVKVIMATNRQDTLDP 304

---

>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 53.1 bits (126), Expect(2) = 8e-11
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDL--SALAKYTQGFSVADITE 425
           AL+RPGRLD+ ++I LP +  R +IF+  L+   L +        LA+ T GFS ADI  
Sbjct: 464 ALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIAN 523

Query: 424 ICQRACKYA 398
           IC  A  +A
Sbjct: 524 ICNEAALHA 532



 Score = 33.1 bits (74), Expect(2) = 8e-11
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL EMDGM     V ++ +TNR DI+D
Sbjct: 436 LLVEMDGMGTTDHVIVLASTNRADILD 462

---

>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 433

 Score = 54.3 bits (129), Expect(2) = 8e-11
 Identities = 28/69 (40%), Positives = 39/69 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGRLD+ I   LPD++ R  IFK   R   + +DI    LA+     + A+I  +
Sbjct: 329 PALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSV 388

Query: 421 CQRACKYAI 395
           C  A  +AI
Sbjct: 389 CTEAGMFAI 397



 Score = 32.0 bits (71), Expect(2) = 8e-11
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           L+ ++DG + +  + ++ ATNRPD +DP
Sbjct: 302 LINQLDGFDPRGNIKVLMATNRPDTLDP 329

---

>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 54.3 bits (129), Expect(2) = 8e-11
 Identities = 28/69 (40%), Positives = 39/69 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGRLD+ I   LPD++ R  IFK   R   + +DI    LA+     + A+I  +
Sbjct: 328 PALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSV 387

Query: 421 CQRACKYAI 395
           C  A  +AI
Sbjct: 388 CTEAGMFAI 396



 Score = 32.0 bits (71), Expect(2) = 8e-11
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           L+ ++DG + +  + ++ ATNRPD +DP
Sbjct: 301 LINQLDGFDPRGNIKVLMATNRPDTLDP 328

---

>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 54.3 bits (129), Expect(2) = 8e-11
 Identities = 28/69 (40%), Positives = 39/69 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGRLD+ I   LPD++ R  IFK   R   + +DI    LA+     + A+I  +
Sbjct: 328 PALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSV 387

Query: 421 CQRACKYAI 395
           C  A  +AI
Sbjct: 388 CTEAGMFAI 396



 Score = 32.0 bits (71), Expect(2) = 8e-11
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           L+ ++DG + +  + ++ ATNRPD +DP
Sbjct: 301 LINQLDGFDPRGNIKVLMATNRPDTLDP 328

---

>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 54.3 bits (129), Expect(2) = 8e-11
 Identities = 28/69 (40%), Positives = 39/69 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGRLD+ I   LPD++ R  IFK   R   + +DI    LA+     + A+I  +
Sbjct: 328 PALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSV 387

Query: 421 CQRACKYAI 395
           C  A  +AI
Sbjct: 388 CTEAGMFAI 396



 Score = 32.0 bits (71), Expect(2) = 8e-11
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           L+ ++DG + +  + ++ ATNRPD +DP
Sbjct: 301 LINQLDGFDPRGNIKVLMATNRPDTLDP 328

---

>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)|
          Length = 415

 Score = 55.1 bits (131), Expect(2) = 8e-11
 Identities = 30/69 (43%), Positives = 37/69 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ I  PLPD   +  IF     K  L++++DL          S ADI  I
Sbjct: 316 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAI 375

Query: 421 CQRACKYAI 395
           CQ A   A+
Sbjct: 376 CQEAGMNAV 384



 Score = 31.2 bits (69), Expect(2) = 8e-11
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNR D +DP
Sbjct: 289 LLNQMDGFDQTTNVKVIMATNRADTLDP 316

---

>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score = 55.1 bits (131), Expect(2) = 8e-11
 Identities = 29/68 (42%), Positives = 39/68 (57%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           A+LRPGR D+LI +P P+V  R +IF+   R   +A  +D   LA  T   S AD+  IC
Sbjct: 304 AILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAIC 363

Query: 418 QRACKYAI 395
             A  +AI
Sbjct: 364 TEAGMFAI 371



 Score = 31.2 bits (69), Expect(2) = 8e-11
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL+EMDG + +  + II ATNR D++D
Sbjct: 276 LLSEMDGFDERGDIRIIAATNRFDMLD 302

---

>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B|
          Length = 414

 Score = 54.3 bits (129), Expect(2) = 1e-10
 Identities = 29/69 (42%), Positives = 36/69 (52%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ I  PLPD   +  +F     +  L+ D+DL          S ADI  I
Sbjct: 315 PALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSI 374

Query: 421 CQRACKYAI 395
           CQ A   A+
Sbjct: 375 CQEAGMQAV 383



 Score = 31.6 bits (70), Expect(2) = 1e-10
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNR D +DP
Sbjct: 288 LLNQMDGFDQSTNVKVIMATNRQDTLDP 315

---

>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 54.3 bits (129), Expect(2) = 1e-10
 Identities = 32/69 (46%), Positives = 39/69 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ I IPLP+   R +I K  L K     +ID  AL K T G + AD+  +
Sbjct: 286 PALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNV 345

Query: 421 CQRACKYAI 395
              A   AI
Sbjct: 346 VTEAGFIAI 354



 Score = 31.6 bits (70), Expect(2) = 1e-10
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +      II ATNRPD +DP
Sbjct: 259 LLNQMDGFDYLGQTKIIMATNRPDTLDP 286

---

>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)|
           (TBP-7)
          Length = 418

 Score = 54.3 bits (129), Expect(2) = 1e-10
 Identities = 29/69 (42%), Positives = 37/69 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ I  PLPD   +  IF     K  L++++DL          S ADI  I
Sbjct: 319 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 378

Query: 421 CQRACKYAI 395
           CQ +   A+
Sbjct: 379 CQESGMLAV 387



 Score = 31.2 bits (69), Expect(2) = 1e-10
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNR D +DP
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDP 319

---

>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7)
          Length = 418

 Score = 54.3 bits (129), Expect(2) = 1e-10
 Identities = 29/69 (42%), Positives = 37/69 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ I  PLPD   +  IF     K  L++++DL          S ADI  I
Sbjct: 319 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 378

Query: 421 CQRACKYAI 395
           CQ +   A+
Sbjct: 379 CQESGMLAV 387



 Score = 31.2 bits (69), Expect(2) = 1e-10
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNR D +DP
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDP 319

---

>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1157

 Score = 51.2 bits (121), Expect(2) = 2e-10
 Identities = 26/68 (38%), Positives = 40/68 (58%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
            ALLRPGRLD+ +   +PD D R  I ++  R   ++K ++LS++A    GFS AD+  + 
Sbjct: 951  ALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQALA 1010

Query: 418  QRACKYAI 395
              A   A+
Sbjct: 1011 YNAYLKAV 1018



 Score = 33.9 bits (76), Expect(2) = 2e-10
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 683  LLTEMDGMNAKKTVFIIGATNRPDIID 603
            +LT+MDG      V+++ AT+RPD+ID
Sbjct: 923  MLTQMDGAEGLDGVYVLAATSRPDLID 949

---

>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 47.0 bits (110), Expect(2) = 2e-10
 Identities = 25/67 (37%), Positives = 36/67 (53%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ I +  PD++ R QI K  L+K      +    +A+ T GFS A++  + 
Sbjct: 309 ALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLV 368

Query: 418 QRACKYA 398
             A   A
Sbjct: 369 NEAALIA 375



 Score = 37.7 bits (86), Expect(2) = 2e-10
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           +L EMDG  A + V II ATNRPD++D
Sbjct: 281 MLVEMDGFEANEGVVIIAATNRPDVLD 307

---

>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 47.0 bits (110), Expect(2) = 2e-10
 Identities = 25/67 (37%), Positives = 36/67 (53%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ I +  PD++ R QI K  L+K      +    +A+ T GFS A++  + 
Sbjct: 309 ALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLV 368

Query: 418 QRACKYA 398
             A   A
Sbjct: 369 NEAALIA 375



 Score = 37.7 bits (86), Expect(2) = 2e-10
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           +L EMDG  A + V II ATNRPD++D
Sbjct: 281 MLVEMDGFEANEGVVIIAATNRPDVLD 307

---

>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 50.1 bits (118), Expect(2) = 2e-10
 Identities = 26/63 (41%), Positives = 34/63 (53%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ + + +PDV  R +I     R   L   I L  +AK T GFS AD+  + 
Sbjct: 327 ALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLL 386

Query: 418 QRA 410
             A
Sbjct: 387 NEA 389



 Score = 34.7 bits (78), Expect(2) = 2e-10
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG      + II ATNR D++D
Sbjct: 299 LLTEMDGFEGNTGIIIIAATNRVDVLD 325

---

>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 53.1 bits (126), Expect(2) = 3e-10
 Identities = 26/67 (38%), Positives = 41/67 (61%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           AL RPGR D+++ + LPDV  R  I K  ++K  LA ++D + +A+ T G S A++  + 
Sbjct: 432 ALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLV 491

Query: 418 QRACKYA 398
            +A  YA
Sbjct: 492 NQAAVYA 498



 Score = 31.2 bits (69), Expect(2) = 3e-10
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL E+DG +    + IIGATN P+ +D
Sbjct: 404 LLVELDGFSQTSGIIIIGATNFPEALD 430

---

>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7) (CIP21)
          Length = 418

 Score = 53.1 bits (126), Expect(2) = 3e-10
 Identities = 28/62 (45%), Positives = 34/62 (54%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGRLD+ I  PLPD   +  IF     K  L++++DL          S ADI  I
Sbjct: 319 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 378

Query: 421 CQ 416
           CQ
Sbjct: 379 CQ 380



 Score = 31.2 bits (69), Expect(2) = 3e-10
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG +    V +I ATNR D +DP
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDP 319

---

>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS8)
          Length = 1030

 Score = 47.0 bits (110), Expect(2) = 4e-10
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDVDSRH-QIFKACLRKSPLAKDIDLSALAKYTQ-GFSVADITE 425
            ALLRPGR D+L+Y+ +PD D++   I +A  RK  L  D+ L  LAK     ++ AD   
Sbjct: 886  ALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYA 945

Query: 424  ICQRA 410
            +C  A
Sbjct: 946  LCSDA 950



 Score = 37.0 bits (84), Expect(2) = 4e-10
 Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
 Frame = -3

Query: 683 LLTEMDGMNAKKT-VFIIGATNRPDIID 603
           LL E+DGM+     VF+IGATNRPD++D
Sbjct: 857 LLAELDGMSTDADGVFVIGATNRPDLLD 884

---

>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 29/62 (46%), Positives = 44/62 (70%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRACKY 401
           RL++ IYIPLP++D R Q+ +  L++ PLA DIDL ++A+   G+S ADIT +C+ A   
Sbjct: 397 RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMM 456

Query: 400 AI 395
           A+
Sbjct: 457 AM 458

---

>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 50.4 bits (119), Expect(2) = 5e-10
 Identities = 25/63 (39%), Positives = 36/63 (57%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           AL+RPGR D  + +P PDV  R +I K  L K    K +D   +A+ T GFS A++  + 
Sbjct: 433 ALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLV 492

Query: 418 QRA 410
            +A
Sbjct: 493 NQA 495



 Score = 33.1 bits (74), Expect(2) = 5e-10
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL EMDG    + V IIGATN P+ +D
Sbjct: 405 LLAEMDGFKPNEGVIIIGATNFPEALD 431

---

>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 50.4 bits (119), Expect(2) = 5e-10
 Identities = 25/63 (39%), Positives = 36/63 (57%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           AL+RPGR D  + +P PDV  R +I K  L K    K +D   +A+ T GFS A++  + 
Sbjct: 433 ALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLV 492

Query: 418 QRA 410
            +A
Sbjct: 493 NQA 495



 Score = 33.1 bits (74), Expect(2) = 5e-10
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL EMDG    + V IIGATN P+ +D
Sbjct: 405 LLAEMDGFKPNEGVIIIGATNFPEALD 431

---

>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score = 54.7 bits (130), Expect(2) = 5e-10
 Identities = 28/64 (43%), Positives = 38/64 (59%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGR+D+ I  PLPD  ++ +IF     +  LA+D++LS L       S ADI  I
Sbjct: 338 PALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAI 397

Query: 421 CQRA 410
           C  A
Sbjct: 398 CTEA 401



 Score = 28.9 bits (63), Expect(2) = 5e-10
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG +++  V +I ATNR + +DP
Sbjct: 311 LLNQLDGFDSRGDVKVIMATNRIETLDP 338

---

>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)|
          Length = 461

 Score = 50.8 bits (120), Expect(2) = 9e-10
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR+D+ I  P P+ ++R  I K   RK  L + I+L  +A+   G S A++  +C
Sbjct: 298 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVC 357

Query: 418 QRACKYAI 395
             A  YA+
Sbjct: 358 TEAGMYAL 365



 Score = 32.0 bits (71), Expect(2) = 9e-10
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL ++DG  A K + +I ATNR DI+D
Sbjct: 270 LLNQLDGFEATKNIKVIMATNRIDILD 296

---

>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 50.8 bits (120), Expect(2) = 9e-10
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR+D+ I  P P+ ++R  I K   RK  L + I+L  +A+   G S A++  +C
Sbjct: 304 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVC 363

Query: 418 QRACKYAI 395
             A  YA+
Sbjct: 364 TEAGMYAL 371



 Score = 32.0 bits (71), Expect(2) = 9e-10
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL ++DG  A K + +I ATNR DI+D
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILD 302

---

>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding
           protein homolog 10) (TBP10)
          Length = 406

 Score = 50.8 bits (120), Expect(2) = 9e-10
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR+D+ I  P P+ ++R  I K   RK  L + I+L  +A+   G S A++  +C
Sbjct: 304 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVC 363

Query: 418 QRACKYAI 395
             A  YA+
Sbjct: 364 TEAGMYAL 371



 Score = 32.0 bits (71), Expect(2) = 9e-10
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL ++DG  A K + +I ATNR DI+D
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILD 302

---

>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1)
          Length = 406

 Score = 50.8 bits (120), Expect(2) = 9e-10
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR+D+ I  P P+ ++R  I K   RK  L + I+L  +A+   G S A++  +C
Sbjct: 304 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVC 363

Query: 418 QRACKYAI 395
             A  YA+
Sbjct: 364 TEAGMYAL 371



 Score = 32.0 bits (71), Expect(2) = 9e-10
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL ++DG  A K + +I ATNR DI+D
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILD 302

---

>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 50.8 bits (120), Expect(2) = 9e-10
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR+D+ I  P P+ ++R  I K   RK  L + I+L  +A+   G S A++  +C
Sbjct: 304 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVC 363

Query: 418 QRACKYAI 395
             A  YA+
Sbjct: 364 TEAGMYAL 371



 Score = 32.0 bits (71), Expect(2) = 9e-10
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL ++DG  A K + +I ATNR DI+D
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILD 302

---

>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5)
          Length = 406

 Score = 50.8 bits (120), Expect(2) = 9e-10
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR+D+ I  P P+ ++R  I K   RK  L + I+L  +A+   G S A++  +C
Sbjct: 304 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVC 363

Query: 418 QRACKYAI 395
             A  YA+
Sbjct: 364 TEAGMYAL 371



 Score = 32.0 bits (71), Expect(2) = 9e-10
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL ++DG  A K + +I ATNR DI+D
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILD 302

---

>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2|
          Length = 1040

 Score = 47.4 bits (111), Expect(2) = 1e-09
 Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK-SPLAKDIDLSALAKYTQGFSVADITE 425
           PAL RPGR D+     LPD ++R +I K   R  +P   D+ L  LA++  G+  ADI  
Sbjct: 237 PALRRPGRFDREFLFSLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKS 296

Query: 424 ICQRACKYAI 395
           IC  A   A+
Sbjct: 297 ICAEAALCAL 306



 Score = 34.7 bits (78), Expect(2) = 1e-09
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL  MDG++++  + +IGATNR D IDP
Sbjct: 210 LLALMDGLDSRGEIVVIGATNRLDSIDP 237

---

>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 48.9 bits (115), Expect(2) = 1e-09
 Identities = 24/63 (38%), Positives = 36/63 (57%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           AL+RPGR D  + +P PDV  R +I K  L K    + +D   +A+ T GFS A++  + 
Sbjct: 491 ALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLV 550

Query: 418 QRA 410
            +A
Sbjct: 551 NQA 553



 Score = 33.1 bits (74), Expect(2) = 1e-09
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL EMDG    + V IIGATN P+ +D
Sbjct: 463 LLAEMDGFKPNEGVIIIGATNFPEALD 489

---

>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAY4)
          Length = 1024

 Score = 45.1 bits (105), Expect(2) = 2e-09
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDVDSRHQ-IFKACLRKSPLAKDIDLSALAKYTQ-GFSVADITE 425
            ALLRPGR D+++Y+ + D   + Q I +A  RK  LA D+ L A++K     F+ AD   
Sbjct: 874  ALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAADVSLEAISKRCPFTFTGADFYA 933

Query: 424  ICQRA 410
            +C  A
Sbjct: 934  LCSDA 938



 Score = 36.6 bits (83), Expect(2) = 2e-09
 Identities = 16/29 (55%), Positives = 23/29 (79%), Gaps = 2/29 (6%)
 Frame = -3

Query: 683 LLTEMDGMNAK--KTVFIIGATNRPDIID 603
           LL E+DGM+    + VF++GATNRPD++D
Sbjct: 844 LLAELDGMSTAGGEGVFVVGATNRPDLLD 872

---

>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 48.9 bits (115), Expect(2) = 2e-09
 Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDI-DL-SALAKYTQGFSVADITE 425
           ALLRPGR D+ I I  P+++ R  IF   L    LA +I DL + LA  T GFS ADI  
Sbjct: 503 ALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIAN 562

Query: 424 ICQRACKYA 398
           +C  A   A
Sbjct: 563 VCNEAALIA 571



 Score = 32.3 bits (72), Expect(2) = 2e-09
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           +L EMDG      V ++  TNRPDI+D
Sbjct: 475 MLVEMDGFTPADHVVVLAGTNRPDILD 501

---

>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score = 49.3 bits (116), Expect(2) = 2e-09
 Identities = 28/68 (41%), Positives = 35/68 (51%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ I I LPD+  R  I K       L+  I L  +AK T GFS A +  + 
Sbjct: 385 ALLRPGRFDRHIQINLPDIKEREGILKVHAENKNLSSKISLLDVAKRTPGFSGAQLENVI 444

Query: 418 QRACKYAI 395
             A   A+
Sbjct: 445 NEATLLAV 452



 Score = 32.0 bits (71), Expect(2) = 2e-09
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL EMDG  ++  V ++ ATNR D++D
Sbjct: 357 LLAEMDGFTSRTGVVVMAATNRLDVLD 383

---

>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 52.0 bits (123), Expect(2) = 3e-09
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGR+D+ I  PLPD  ++ +IF+    +  LA D+ L  L       S ADI  I
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAI 398

Query: 421 CQRA 410
           C  A
Sbjct: 399 CTEA 402



 Score = 28.9 bits (63), Expect(2) = 3e-09
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG +++  V +I ATNR + +DP
Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDP 339

---

>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding
           protein homolog SATA)
          Length = 439

 Score = 48.5 bits (114), Expect(2) = 3e-09
 Identities = 25/69 (36%), Positives = 40/69 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLR GRLD+ I  P+P+ ++R +I +   RK  ++ D++   LA+ T  F+ A    +
Sbjct: 340 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 399

Query: 421 CQRACKYAI 395
           C  A   A+
Sbjct: 400 CVEAGMIAL 408



 Score = 32.3 bits (72), Expect(2) = 3e-09
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG      V +I ATNR DI+DP
Sbjct: 313 LLNQLDGFQPNTQVKVIAATNRVDILDP 340

---

>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Proteasome subunit P50)
          Length = 439

 Score = 48.5 bits (114), Expect(2) = 3e-09
 Identities = 25/69 (36%), Positives = 40/69 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLR GRLD+ I  P+P+ ++R +I +   RK  ++ D++   LA+ T  F+ A    +
Sbjct: 340 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 399

Query: 421 CQRACKYAI 395
           C  A   A+
Sbjct: 400 CVEAGMIAL 408



 Score = 32.3 bits (72), Expect(2) = 3e-09
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG      V +I ATNR DI+DP
Sbjct: 313 LLNQLDGFQPNTQVKVIAATNRVDILDP 340

---

>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7|
          Length = 435

 Score = 48.9 bits (115), Expect(2) = 3e-09
 Identities = 25/69 (36%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGRLD+ +   LPD+  R  I K   ++  + +DI    LA+     + A+I  +
Sbjct: 331 PALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSV 390

Query: 421 CQRACKYAI 395
           C  A  +AI
Sbjct: 391 CTEAGMFAI 399



 Score = 32.0 bits (71), Expect(2) = 3e-09
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           L+ ++DG + +  + ++ ATNRPD +DP
Sbjct: 304 LINQLDGFDPRGNIKVLMATNRPDTLDP 331

---

>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2|
          Length = 1091

 Score = 45.4 bits (106), Expect(2) = 4e-09
 Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK-SPLAKDIDLSALAKYTQGFSVADITE 425
           PAL RPGR D+     LPD ++R +I K   R  +P   D  L  LA+   G+  ADI  
Sbjct: 413 PALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYRGADIKS 472

Query: 424 ICQRACKYAI 395
           IC  A   A+
Sbjct: 473 ICAEAALCAL 482



 Score = 35.0 bits (79), Expect(2) = 4e-09
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL  MDG++++  + +IGATNR D IDP
Sbjct: 386 LLALMDGLDSRGEIVVIGATNRLDAIDP 413

---

>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1043

 Score = 45.4 bits (106), Expect(2) = 4e-09
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDVDSRHQIFKACL---------RKSPLAKDIDLSALAKYTQGF 446
            ALLRPGRLD+ +   +P    R  I +A +         +K  L K+ DL  +A+ T GF
Sbjct: 849  ALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGF 908

Query: 445  SVADITEICQRA 410
            S AD+  +C  A
Sbjct: 909  SGADLQGLCYNA 920



 Score = 35.0 bits (79), Expect(2) = 4e-09
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLT+MDG      V+I+ AT+RPD+ID
Sbjct: 821 LLTQMDGAEGLDGVYILAATSRPDLID 847

---

>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score = 48.5 bits (114), Expect(2) = 4e-09
 Identities = 27/68 (39%), Positives = 36/68 (52%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ I I LPD+  R  I +   +   L+  I L  +AK T GFS A +  + 
Sbjct: 382 ALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENVI 441

Query: 418 QRACKYAI 395
             A   A+
Sbjct: 442 NEATLLAV 449



 Score = 32.0 bits (71), Expect(2) = 4e-09
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL EMDG  ++  V ++ ATNR D++D
Sbjct: 354 LLAEMDGFTSRTGVVVMAATNRLDVLD 380

---

>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1)
          Length = 442

 Score = 48.1 bits (113), Expect(2) = 4e-09
 Identities = 25/69 (36%), Positives = 40/69 (57%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLR GRLD+ I  P+P+ ++R +I +   RK  ++ D++   LA+ T  F+ A    +
Sbjct: 343 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAV 402

Query: 421 CQRACKYAI 395
           C  A   A+
Sbjct: 403 CVEAGMIAL 411



 Score = 32.3 bits (72), Expect(2) = 4e-09
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG      V +I ATNR DI+DP
Sbjct: 316 LLNQLDGFQPNTQVKVIAATNRVDILDP 343

---

>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 51.6 bits (122), Expect(2) = 4e-09
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGR+D+ I  PLPD  ++ +IF+    +  LA D+ L  L       S ADI  I
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAI 398

Query: 421 CQRA 410
           C  A
Sbjct: 399 CTEA 402



 Score = 28.9 bits (63), Expect(2) = 4e-09
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG +++  V +I ATNR + +DP
Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDP 339

---

>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 51.6 bits (122), Expect(2) = 4e-09
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGR+D+ I  PLPD  ++ +IF+    +  LA D+ L  L       S ADI  I
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAI 398

Query: 421 CQRA 410
           C  A
Sbjct: 399 CTEA 402



 Score = 28.9 bits (63), Expect(2) = 4e-09
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG +++  V +I ATNR + +DP
Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDP 339

---

>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 51.6 bits (122), Expect(2) = 4e-09
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGR+D+ I  PLPD  ++ +IF+    +  LA D+ L  L       S ADI  I
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAI 398

Query: 421 CQRA 410
           C  A
Sbjct: 399 CTEA 402



 Score = 28.9 bits (63), Expect(2) = 4e-09
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG +++  V +I ATNR + +DP
Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDP 339

---

>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein|
           homolog 1) (TBP-1)
          Length = 434

 Score = 48.5 bits (114), Expect(2) = 4e-09
 Identities = 29/69 (42%), Positives = 37/69 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLR GRLD+ I  PLP  DSR QI +   RK     DI+   LA+ T  F+ A +  +
Sbjct: 335 PALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAV 394

Query: 421 CQRACKYAI 395
              A   A+
Sbjct: 395 TVEAGMIAL 403



 Score = 32.0 bits (71), Expect(2) = 4e-09
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG ++   V ++ ATNR D++DP
Sbjct: 308 LLNQLDGFSSDDRVKVLAATNRVDVLDP 335

---

>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2|
          Length = 1390

 Score = 45.4 bits (106), Expect(2) = 5e-09
 Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK-SPLAKDIDLSALAKYTQGFSVADITE 425
           PAL RPGR D+     LPD ++R +I K   R  +P   D  L  LA+   G+  ADI  
Sbjct: 582 PALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKS 641

Query: 424 ICQRACKYAI 395
           IC  A   A+
Sbjct: 642 ICAEAALCAL 651



 Score = 34.7 bits (78), Expect(2) = 5e-09
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL  MDG++++  + +IGATNR D IDP
Sbjct: 555 LLALMDGLDSRGEIVVIGATNRLDSIDP 582

---

>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score = 46.2 bits (108), Expect(2) = 5e-09
 Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK---SPLAKDIDLS----ALAKYTQGFSV 440
           AL+RPGR D+ I I  PDV+ R QI+   L++    PL  D D++     LA  T GF+ 
Sbjct: 444 ALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTD-DMNNLSGKLATLTPGFTG 502

Query: 439 ADITEICQRACKYA 398
           ADI   C  A   A
Sbjct: 503 ADIANACNEAALIA 516



 Score = 33.9 bits (76), Expect(2) = 5e-09
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL EMDG      V ++  TNRPD++D
Sbjct: 416 LLVEMDGFTTSDQVVVLAGTNRPDVLD 442

---

>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 44.7 bits (104), Expect(2) = 5e-09
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D+ + + +PD   R  I +   +   +   + L  +A+ T GFS AD+  + 
Sbjct: 327 ALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLL 386

Query: 418 QRA 410
             A
Sbjct: 387 NEA 389



 Score = 35.4 bits (80), Expect(2) = 5e-09
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG      V +I ATNR DI+D
Sbjct: 299 LLTEMDGFEGNTGVIVIAATNRADILD 325

---

>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein|
           10) (TBP-10)
          Length = 404

 Score = 48.1 bits (113), Expect(2) = 5e-09
 Identities = 24/64 (37%), Positives = 38/64 (59%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLR GRLD+ I  P+P+ ++R +I +   RK  ++ D++   LA+ T  F+ A    +
Sbjct: 305 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 364

Query: 421 CQRA 410
           C  A
Sbjct: 365 CVEA 368



 Score = 32.0 bits (71), Expect(2) = 5e-09
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG      V +I ATNR DI+DP
Sbjct: 278 LLNQLDGFQPTTQVKVIAATNRVDILDP 305

---

>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein|
           homolog 10) (Fragment)
          Length = 389

 Score = 48.9 bits (115), Expect(2) = 5e-09
 Identities = 27/69 (39%), Positives = 37/69 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR+D+ I  P P    R  I K   RK  L + I+L  ++    G S A++  +
Sbjct: 286 PALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAV 345

Query: 421 CQRACKYAI 395
           C  A  YA+
Sbjct: 346 CTEAGMYAL 354



 Score = 31.2 bits (69), Expect(2) = 5e-09
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG  + K + ++  TNR DI+DP
Sbjct: 259 LLNQLDGFESTKNIKVLMCTNRIDILDP 286

---

>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1198

 Score = 45.1 bits (105), Expect(2) = 7e-09
 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDVDSRH-QIFKACLRKSPLAKDIDLSALAKYTQ-GFSVADITE 425
            ALLRPGR D+++Y+ + D D +  +I +A  RK  LA ++DL  +AK     F+ AD   
Sbjct: 997  ALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLYEIAKRCSFTFTGADFYA 1056

Query: 424  IC 419
            +C
Sbjct: 1057 LC 1058



 Score = 34.7 bits (78), Expect(2) = 7e-09
 Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 5/32 (15%)
 Frame = -3

Query: 683  LLTEMDGMNAKKT-----VFIIGATNRPDIID 603
            LL E+DGM+         VF++GATNRPD++D
Sbjct: 964  LLAELDGMSGGAEGGGDGVFVVGATNRPDLLD 995

---

>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1000

 Score = 43.1 bits (100), Expect(2) = 7e-09
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDVDSRH-QIFKACLRKSPLAKDIDLSALAKYTQ-GFSVADITE 425
            ALLRPGR D+++Y+ + D D +   I KA  RK  L   ID+  +AK     ++ AD   
Sbjct: 856  ALLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESGIDILDIAKKCPFNYTGADFYA 915

Query: 424  ICQRA 410
            +C  A
Sbjct: 916  LCSDA 920



 Score = 36.6 bits (83), Expect(2) = 7e-09
 Identities = 17/28 (60%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = -3

Query: 683 LLTEMDGMNAKKT-VFIIGATNRPDIID 603
           LL E+DGM++    VF+IGATNRPD++D
Sbjct: 827 LLAELDGMSSGGDGVFVIGATNRPDLLD 854

---

>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 429

 Score = 45.8 bits (107), Expect(2) = 7e-09
 Identities = 24/69 (34%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+R GRLD+ I  P P  ++R +I +   RK  +  D++   LA+ T  F+ A +  +
Sbjct: 330 PALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAV 389

Query: 421 CQRACKYAI 395
           C  A   A+
Sbjct: 390 CVEAGMLAL 398



 Score = 33.9 bits (76), Expect(2) = 7e-09
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG ++ + + +I ATNR DI+DP
Sbjct: 303 LLNQLDGFSSDERIKVIAATNRADILDP 330

---

>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome|
           regulatory subunit 1)
          Length = 411

 Score = 48.5 bits (114), Expect(2) = 7e-09
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           A+LRPGR D+LI +P P+ D+R +I +    +  +A  +D S LA  T  FS A +  + 
Sbjct: 307 AILRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLA 366

Query: 418 QRACKYAI 395
             A  +AI
Sbjct: 367 TEAGMFAI 374



 Score = 31.2 bits (69), Expect(2) = 7e-09
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL+EMDG + +  + II ATNR D++D
Sbjct: 279 LLSEMDGFDERGDIRIIAATNRFDMLD 305

---

>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 36/119 (30%), Positives = 57/119 (47%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRACKY 401
           RL++ IYIPLP    R ++ +  LR+  LA D+DL+++A+  +G+S ADIT +C+ A   
Sbjct: 372 RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLM 431

Query: 400 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 224
           A+                                    FE ++K   +SVS ADI +Y+
Sbjct: 432 AMRRRIEGLTPEEIRNLSKEEMHMPTT--------MEDFEMALKKVSKSVSAADIERYE 482

---

>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18|
          Length = 758

 Score = 46.6 bits (109), Expect(2) = 9e-09
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIF----KACLRKSPLAKDIDLSALAKYTQGFSVADI 431
           ALLRPGR +  + I LPD   R QIF    K     + ++ D++L+ LA  T+ FS A+I
Sbjct: 403 ALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEI 462

Query: 430 TEICQRACKYAI 395
             + + A  +AI
Sbjct: 463 EGLVKSASSFAI 474



 Score = 32.7 bits (73), Expect(2) = 9e-09
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL +MDG++    + +IG TNR D+ID
Sbjct: 375 LLAKMDGVDQLNNILVIGMTNRKDLID 401

---

>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
          Length = 742

 Score = 45.4 bits (106), Expect(2) = 9e-09
 Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK----SPLAKDIDLSALAKYTQGFSVADI 431
           ALLRPGRL+  + I LPD   R QI +    K    S L  DI+L  LA  T+ +S A++
Sbjct: 379 ALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAEL 438

Query: 430 TEICQRACKYAI 395
             + + A  YA+
Sbjct: 439 EGVVKSATSYAL 450



 Score = 33.9 bits (76), Expect(2) = 9e-09
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLT++DG+ A   V +IG TNR D++D
Sbjct: 351 LLTKIDGVEALNNVLLIGMTNRKDLLD 377

---

>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 424

 Score = 45.4 bits (106), Expect(2) = 9e-09
 Identities = 24/69 (34%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+R GRLD+ I  P P  ++R +I +   RK  +  D++   LA+ T  F+ A +  +
Sbjct: 325 PALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAV 384

Query: 421 CQRACKYAI 395
           C  A   A+
Sbjct: 385 CVEAGMLAL 393



 Score = 33.9 bits (76), Expect(2) = 9e-09
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG ++ + + +I ATNR DI+DP
Sbjct: 298 LLNQLDGFSSDERIKVIAATNRADILDP 325

---

>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding|
           protein homolog)
          Length = 414

 Score = 47.0 bits (110), Expect(2) = 9e-09
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR+D+ I  P P+  +R  I K   R+  L + I+L  +A    G S A+I   
Sbjct: 311 PALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKAT 370

Query: 421 CQRACKYAI 395
           C  A  +A+
Sbjct: 371 CTEAGMFAL 379



 Score = 32.3 bits (72), Expect(2) = 9e-09
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG  + + + II ATNR DI+DP
Sbjct: 284 LLNQLDGFESTQNIKIIMATNRIDILDP 311

---

>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 948

 Score = 41.6 bits (96), Expect(2) = 1e-08
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPL-PDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQ-GFSVADIT 428
            P+LLRPGR D+L+Y+ +    +S+  + +A  +   L + IDL+ +AK     F+ AD+ 
Sbjct: 809  PSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMY 868

Query: 427  EICQRACKYAI 395
             +C  A   AI
Sbjct: 869  ALCSDAVLSAI 879



 Score = 37.4 bits (85), Expect(2) = 1e-08
 Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
 Frame = -3

Query: 683 LLTEMDGMNA--KKTVFIIGATNRPDIIDP 600
           LL E+D ++    K VF+IGATNRPD++DP
Sbjct: 780 LLAELDSISKDNNKYVFVIGATNRPDLLDP 809

---

>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18|
          Length = 794

 Score = 46.6 bits (109), Expect(2) = 1e-08
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIF----KACLRKSPLAKDIDLSALAKYTQGFSVADI 431
           ALLRPGR +  I I LPD   R  IF    K       L+ D++   L+  T+ F+ A+I
Sbjct: 440 ALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTGAEI 499

Query: 430 TEICQRACKYAI 395
             +C  A  YAI
Sbjct: 500 EGLCNSAKSYAI 511



 Score = 32.3 bits (72), Expect(2) = 1e-08
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL++MDG++    + +IG TNR D+ID
Sbjct: 412 LLSKMDGVDQLNNILVIGMTNRLDLID 438

---

>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)|
          Length = 1388

 Score = 40.4 bits (93), Expect(2) = 1e-08
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDV-DSRHQIFKACLRKSPLAKDIDLSALAKYTQ-GFSVADIT 428
            PALLRPGR D+++Y+ + D  D + +I +A  RK  L   + L ++A+     ++ AD  
Sbjct: 1150 PALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSLHSVAQQLPFTYTGADFY 1209

Query: 427  EICQRACKYAI 395
             +C  A   A+
Sbjct: 1210 ALCSDAMLKAV 1220



 Score = 38.1 bits (87), Expect(2) = 1e-08
 Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 4/32 (12%)
 Frame = -3

Query: 683  LLTEMDGMNAKKT----VFIIGATNRPDIIDP 600
            LL E+DGM+        VF+IGATNRPD++DP
Sbjct: 1119 LLAELDGMSGGDDTSGGVFVIGATNRPDLLDP 1150

---

>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
           (LEMA-1)
          Length = 423

 Score = 45.4 bits (106), Expect(2) = 2e-08
 Identities = 24/69 (34%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+R GRLD+ I  P P  ++R +I +   RK  +  D++   LA+ T  F+ A +  +
Sbjct: 324 PALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAV 383

Query: 421 CQRACKYAI 395
           C  A   A+
Sbjct: 384 CVEAGMLAL 392



 Score = 33.1 bits (74), Expect(2) = 2e-08
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG ++   + +I ATNR DI+DP
Sbjct: 297 LLNQLDGFSSDDRIKVIAATNRADILDP 324

---

>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 419

 Score = 45.4 bits (106), Expect(2) = 2e-08
 Identities = 24/69 (34%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+R GRLD+ I  P P  ++R +I +   RK  +  D++   LA+ T  F+ A +  +
Sbjct: 320 PALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAV 379

Query: 421 CQRACKYAI 395
           C  A   A+
Sbjct: 380 CVEAGMLAL 388



 Score = 33.1 bits (74), Expect(2) = 2e-08
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG ++   + +I ATNR DI+DP
Sbjct: 293 LLNQLDGFSSDDRIKVIAATNRADILDP 320

---

>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
           ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 981

 Score = 44.3 bits (103), Expect(2) = 2e-08
 Identities = 17/28 (60%), Positives = 25/28 (89%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL E+DG+++ + VF+IGATNRPD++DP
Sbjct: 830 LLAELDGLHSTQDVFVIGATNRPDLLDP 857



 Score = 33.9 bits (76), Expect(2) = 2e-08
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYI-PLPDVDSRHQIFKACLRKSPLAKDIDL-SALAKYTQGFSVADIT 428
            PALLRPGR D+L+++    D  S+ ++  A  RK  L   + L + L       + AD+ 
Sbjct: 857  PALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLY 916

Query: 427  EICQRACKYAI 395
             +C  A   A+
Sbjct: 917  SLCSDAMMTAL 927

---

>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
           ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 980

 Score = 44.3 bits (103), Expect(2) = 2e-08
 Identities = 17/28 (60%), Positives = 25/28 (89%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL E+DG+++ + VF+IGATNRPD++DP
Sbjct: 829 LLAELDGLHSTQDVFVIGATNRPDLLDP 856



 Score = 33.9 bits (76), Expect(2) = 2e-08
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPL-PDVDSRHQIFKACLRKSPLAKDIDL-SALAKYTQGFSVADIT 428
            PALLRPGR D+L+++    D  S+ ++  A  RK  L   + L + L       + AD+ 
Sbjct: 856  PALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLY 915

Query: 427  EICQRACKYAI 395
             +C  A   A+
Sbjct: 916  SLCSDAMTAAL 926

---

>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
           ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 978

 Score = 44.3 bits (103), Expect(2) = 2e-08
 Identities = 17/28 (60%), Positives = 25/28 (89%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL E+DG+++ + VF+IGATNRPD++DP
Sbjct: 827 LLAELDGLHSTQDVFVIGATNRPDLLDP 854



 Score = 33.9 bits (76), Expect(2) = 2e-08
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYI-PLPDVDSRHQIFKACLRKSPLAKDIDL-SALAKYTQGFSVADIT 428
            PALLRPGR D+L+++    D  S+ ++  A  RK  L   + L + L       + AD+ 
Sbjct: 854  PALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLY 913

Query: 427  EICQRACKYAI 395
             +C  A   A+
Sbjct: 914  SLCSDAMMTAL 924

---

>TBP7_CAEEL (P54816) TAT-binding homolog 7|
          Length = 1242

 Score = 43.5 bits (101), Expect(2) = 2e-08
 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDI--DLSALAKYTQGFSVADIT 428
           PAL RPGR D+ +   LPD+++R QI      K    K I   L A+A+ T G+  AD+ 
Sbjct: 547 PALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLK 606

Query: 427 EICQRA 410
            +C  A
Sbjct: 607 FLCTEA 612



 Score = 34.3 bits (77), Expect(2) = 2e-08
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL  MDG++ +  V +IGATNR D +DP
Sbjct: 520 LLALMDGLDGRGEVVVIGATNRLDTLDP 547

---

>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 47.0 bits (110), Expect(2) = 2e-08
 Identities = 27/63 (42%), Positives = 35/63 (55%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D  + +P PD+  R  IF   L K   +  ID   LAK + GF+ ADI  + 
Sbjct: 353 ALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMV 412

Query: 418 QRA 410
            +A
Sbjct: 413 NQA 415



 Score = 30.8 bits (68), Expect(2) = 2e-08
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL+EMDG    + + +I ATNR D +D
Sbjct: 325 LLSEMDGFTRNEGIIVIAATNRVDDLD 351

---

>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 43.5 bits (101), Expect(2) = 2e-08
 Identities = 23/63 (36%), Positives = 34/63 (53%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           ALLRPGR D  I++  P  + R  +    L+K     +ID+  LA  T G++ ADI  + 
Sbjct: 318 ALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLV 377

Query: 418 QRA 410
            +A
Sbjct: 378 NQA 380



 Score = 34.3 bits (77), Expect(2) = 2e-08
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL EMDG  +K+ + ++GATN+ +++D
Sbjct: 290 LLAEMDGFQSKEGIIVLGATNQAEVLD 316

---

>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 35/119 (29%), Positives = 57/119 (47%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRACKY 401
           RL++ IYIPLP    R ++ +  LR+  LA D++L+++A+  +G+S ADIT +C+ A   
Sbjct: 372 RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLM 431

Query: 400 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 224
           A+                                    FE ++K   +SVS ADI +Y+
Sbjct: 432 AMRRRIEGLTPEEIRNLSREEMHMPTT--------MEDFEMALKKVSKSVSAADIERYE 482

---

>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 35/119 (29%), Positives = 57/119 (47%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRACKY 401
           RL++ IYIPLP    R ++ +  LR+  LA D++L+++A+  +G+S ADIT +C+ A   
Sbjct: 372 RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLM 431

Query: 400 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 224
           A+                                    FE ++K   +SVS ADI +Y+
Sbjct: 432 AMRRRIEGLTPEEIRNLSREAMHMPTT--------MEDFEMALKKISKSVSAADIERYE 482

---

>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1381

 Score = 38.9 bits (89), Expect(2) = 3e-08
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDV-DSRHQIFKACLRKSPLAKDIDLSALA-KYTQGFSVADIT 428
            PALLRPGR D+++Y+ + D  D +  I +A  RK  L   + L ++A +    ++ AD  
Sbjct: 1147 PALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPFTYTGADFY 1206

Query: 427  EICQRACKYAI 395
             +C  A   A+
Sbjct: 1207 ALCSDAMLKAV 1217



 Score = 38.5 bits (88), Expect(2) = 3e-08
 Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 4/32 (12%)
 Frame = -3

Query: 683  LLTEMDGMNAKKT----VFIIGATNRPDIIDP 600
            LL E+DGM+  +     VF+IGATNRPD++DP
Sbjct: 1116 LLAELDGMSGGEGGGGGVFVIGATNRPDLLDP 1147

---

>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1017

 Score = 40.0 bits (92), Expect(2) = 3e-08
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDV-DSRHQIFKACLRKSPLAKDIDLSAL-AKYTQGFSVADITE 425
            ALLRPGR D+LIY+ + D  + +  I +A  RK  ++ DI+   L + +   ++ AD   
Sbjct: 872  ALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDINFDELVSDFPFSYTGADFYA 931

Query: 424  ICQRA 410
            +C  A
Sbjct: 932  LCSDA 936



 Score = 37.4 bits (85), Expect(2) = 3e-08
 Identities = 18/28 (64%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = -3

Query: 683 LLTEMDGMNAKKT-VFIIGATNRPDIID 603
           LL E+DGM++    VFIIGATNRPD++D
Sbjct: 843 LLAELDGMSSDGDGVFIIGATNRPDLLD 870

---

>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog|
          Length = 792

 Score = 45.1 bits (105), Expect(2) = 3e-08
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP----LAKDIDLSALAKYTQGFSVADI 431
           ALLRPGRL+  + I LPD   R QI K    +      L  D+D+  LA  T+ FS A+I
Sbjct: 433 ALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEI 492

Query: 430 TEICQRACKYA 398
             + + A  +A
Sbjct: 493 AGLIKSASSFA 503



 Score = 32.3 bits (72), Expect(2) = 3e-08
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL +MDG++    + +IG TNR D+ID
Sbjct: 405 LLAKMDGVDQLNNILVIGMTNRKDMID 431

---

>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4|
          Length = 443

 Score = 49.3 bits (116), Expect(2) = 4e-08
 Identities = 24/64 (37%), Positives = 36/64 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGR+D+ I  PLPD  ++ +IF+    +  L K+++L          S ADI  +
Sbjct: 342 PALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAM 401

Query: 421 CQRA 410
           C  A
Sbjct: 402 CTEA 405



 Score = 27.7 bits (60), Expect(2) = 4e-08
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG +++  V ++ ATNR + +DP
Sbjct: 315 LLNQLDGFDSRGDVKVLMATNRIESLDP 342

---

>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A|
          Length = 438

 Score = 45.8 bits (107), Expect(2) = 4e-08
 Identities = 25/69 (36%), Positives = 39/69 (56%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLR GRLD+ +  PLP+ ++R  I +   RK  +  DI+   LA+ T  ++ A +  +
Sbjct: 339 PALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSV 398

Query: 421 CQRACKYAI 395
           C  A   A+
Sbjct: 399 CVEAGMIAL 407



 Score = 31.2 bits (69), Expect(2) = 4e-08
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG ++   V +I ATNR D +DP
Sbjct: 312 LLNQLDGFSSDDRVKVIAATNRVDTLDP 339

---

>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1459

 Score = 38.5 bits (88), Expect(2) = 5e-08
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDVDSRH-QIFKACLRKSPLAKDIDLSALAKYTQ-GFSVADITE 425
            ALLRPGR D+++Y+ + D   +   I +A  RK  L  D+ L  +A+     ++ AD+  
Sbjct: 1187 ALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVAEQLPLTYTGADLYA 1246

Query: 424  ICQRACKYAI 395
            +C  A   AI
Sbjct: 1247 LCSDAMLKAI 1256



 Score = 38.1 bits (87), Expect(2) = 5e-08
 Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
 Frame = -3

Query: 683  LLTEMDGMNAKKT----VFIIGATNRPDIID 603
            LL E+DGMN  +     VF+IGATNRPD++D
Sbjct: 1155 LLAELDGMNGGEENSGGVFVIGATNRPDLLD 1185

---

>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)|
           (TAT-binding homolog 3)
          Length = 467

 Score = 45.1 bits (105), Expect(2) = 5e-08
 Identities = 21/69 (30%), Positives = 38/69 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PALLRPGR+D+ +   LPD++ R  IF+   +   + + I    +++     + A++  +
Sbjct: 363 PALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSV 422

Query: 421 CQRACKYAI 395
           C  A  +AI
Sbjct: 423 CTEAGMFAI 431



 Score = 31.6 bits (70), Expect(2) = 5e-08
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           L+T++DG + +  + ++ ATNRP+ +DP
Sbjct: 336 LITQLDGFDPRGNIKVMFATNRPNTLDP 363

---

>FTSH_CHLVU (P56369) Cell division protein ftsH homolog|
          Length = 1720

 Score = 38.1 bits (87), Expect(2) = 7e-08
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
            PALLRPGR D+++ + LP    R +I +   +     K +  +   + T GF+ AD+  +
Sbjct: 1185 PALLRPGRFDKIVKVGLPAQKKRVEILQFYGQTLGYQKTMPWAYFGERTVGFTAADLATL 1244

Query: 421  CQRACKYAI 395
               +   AI
Sbjct: 1245 MNESALKAI 1253



 Score = 38.1 bits (87), Expect(2) = 7e-08
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = -3

Query: 683  LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
            LL E+DG+  +  V I GATNRP+++DP
Sbjct: 1158 LLIELDGIQGRNGVVIFGATNRPEVLDP 1185

---

>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)|
           (TAT-binding homolog 2)
          Length = 428

 Score = 41.6 bits (96), Expect(2) = 2e-07
 Identities = 29/65 (44%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIP-LPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITE 425
           PALLRPGRLD+ I  P L D   R  IF     K  LA + DL +L       S A I  
Sbjct: 326 PALLRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAA 385

Query: 424 ICQRA 410
           I Q A
Sbjct: 386 IMQEA 390



 Score = 33.5 bits (75), Expect(2) = 2e-07
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT+MDG +    V +I ATNR D +DP
Sbjct: 299 LLTQMDGFDQSTNVKVIMATNRADTLDP 326

---

>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 37/119 (31%), Positives = 54/119 (45%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRACKY 401
           RL++ IYIPLP    R ++ K  LR+  L  DI L  +A+ T+G+S ADIT IC+ A   
Sbjct: 369 RLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLM 428

Query: 400 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 224
           A+                               +     E ++K   +SVS AD+ KY+
Sbjct: 429 AM--------RRRINGLSPEEIRALSKEELQMPVTRGDLELALKKIAKSVSAADLEKYE 479

---

>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog|
          Length = 423

 Score = 43.1 bits (100), Expect(2) = 2e-07
 Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIP-LPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITE 425
           PALLRPGRLD+ I  P L D   R  IF     K  L+ ++DL +L    +  S A I  
Sbjct: 320 PALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAA 379

Query: 424 ICQRA 410
           I Q A
Sbjct: 380 IMQEA 384



 Score = 31.6 bits (70), Expect(2) = 2e-07
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL +MDG      V +I ATNR D +DP
Sbjct: 293 LLNQMDGFEQSSNVKVIMATNRADTLDP 320

---

>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1135

 Score = 38.1 bits (87), Expect(2) = 3e-07
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDV-DSRHQIFKACLRKSPLAKDIDLSALAKYTQ-GFSVADITE 425
            ALLRPGR D+++Y+ + D  + + +I +A  RK  L   +DL  +A+     ++ AD   
Sbjct: 969  ALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIAETCPFTYTGADFYA 1028

Query: 424  ICQRA 410
            +C  A
Sbjct: 1029 LCSDA 1033



 Score = 36.2 bits (82), Expect(2) = 3e-07
 Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 3/30 (10%)
 Frame = -3

Query: 683  LLTEMDGMNAKKT---VFIIGATNRPDIID 603
            LL E+DGM+  +    VF++GATNRPD++D
Sbjct: 938  LLAELDGMSGAEGGDGVFVVGATNRPDLLD 967

---

>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 32/119 (26%), Positives = 57/119 (47%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRACKY 401
           RL++ IYIPLPD +SR  +    LR   +A D+++  +A+ T+G+S  D+T +C+ A   
Sbjct: 403 RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMN 462

Query: 400 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 224
            +                +              +    FEE+++  + SVS +DI K++
Sbjct: 463 GM-------RRKIAGKTRDEIKNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHE 514

---

>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1021

 Score = 40.0 bits (92), Expect(2) = 3e-07
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDVDSRH-QIFKACLRKSPLAKDI---DLSALAKYTQGFSVADI 431
            ALLRPGR D+L+Y+ + D + +   I +A  RK  L  D+   DL+A   +T  ++ AD 
Sbjct: 877  ALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVSLDDLAASCPFT--YTGADF 934

Query: 430  TEICQRA 410
              +C  A
Sbjct: 935  YALCSDA 941



 Score = 33.9 bits (76), Expect(2) = 3e-07
 Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
 Frame = -3

Query: 683 LLTEMDGMNAKKT-VFIIGATNRPDIID 603
           LL E+DG++     +F+IGATNRPD++D
Sbjct: 848 LLAELDGLSTGGDGLFVIGATNRPDLLD 875

---

>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 36/119 (30%), Positives = 54/119 (45%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRACKY 401
           RL++ IYIPLP    R ++ K  LR+  L  DI L  +A+  +G+S ADIT +C+ A   
Sbjct: 371 RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLM 430

Query: 400 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 224
           A+                               +    FE ++K   +SVS AD+ KY+
Sbjct: 431 AM--------RRRINGLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYE 481

---

>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 36/119 (30%), Positives = 53/119 (44%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRACKY 401
           RL++ IYIPLP    R ++ K  LR+  L  D+ L  +A  T+G+S ADIT IC+ A   
Sbjct: 369 RLEKRIYIPLPTAKGRAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLM 428

Query: 400 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 224
           A+                               +     E ++K   +SVS AD+ KY+
Sbjct: 429 AM--------RRRINGLSPEEIRALSKEELQMPVTRGDLELALKKIAKSVSAADLEKYE 479

---

>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS5)
          Length = 1165

 Score = 38.1 bits (87), Expect(2) = 5e-07
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
 Frame = -1

Query: 598  ALLRPGRLDQLIYIPLPDV-DSRHQIFKACLRKSPLAKDIDLSALAKYTQ-GFSVADITE 425
            ALLRPGR D+++Y+ + D  + + +I +A  RK  L   +DL  +A+     F+ AD   
Sbjct: 975  ALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVAESCPFTFTGADFYA 1034

Query: 424  ICQRA 410
            +C  A
Sbjct: 1035 LCSDA 1039



 Score = 35.0 bits (79), Expect(2) = 5e-07
 Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 3/30 (10%)
 Frame = -3

Query: 683  LLTEMDGMNAKKT---VFIIGATNRPDIID 603
            LL E+DGM+       VF++GATNRPD++D
Sbjct: 944  LLAELDGMSGGDGGDGVFVVGATNRPDLLD 973

---

>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog|
          Length = 438

 Score = 43.9 bits (102), Expect(2) = 6e-07
 Identities = 21/68 (30%), Positives = 37/68 (54%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           AL+RPGR+D+ +   LPD++ R  I +   +   + KDI    +A+     + A++  +C
Sbjct: 334 ALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVC 393

Query: 418 QRACKYAI 395
             A  +AI
Sbjct: 394 TEAGMFAI 401



 Score = 29.3 bits (64), Expect(2) = 6e-07
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           L+T++DG + +  + ++ ATNRP+ +D
Sbjct: 306 LITQLDGFDPRGNIKVLFATNRPNTLD 332

---

>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 33/119 (27%), Positives = 54/119 (45%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRACKY 401
           RL++ IYIPLP    R ++ +  L++  LA D+++  +A+   G+S ADIT +C+ A   
Sbjct: 369 RLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLM 428

Query: 400 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 224
           A+                                    FE ++K   +SVS +DI KY+
Sbjct: 429 AMRRRIEGLTPEEIRNLSRDDMHMPTT--------MEDFEMALKKVSKSVSASDIEKYE 479

---

>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein) (SKD2 protein)
          Length = 744

 Score = 38.1 bits (87), Expect(2) = 9e-07
 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIF---KACLR-KSPLAKDIDLSALAKYTQGFSVADI 431
           ALLRPGRL+  + I LPD   R QI     A +R    L+ D+D+  LA  T+ FS A++
Sbjct: 382 ALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAEL 441

Query: 430 TEICQRA 410
             + + A
Sbjct: 442 EGLVRAA 448



 Score = 34.3 bits (77), Expect(2) = 9e-07
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL+++DG+     + +IG TNRPD+ID
Sbjct: 354 LLSKIDGVEQLNNILVIGMTNRPDLID 380

---

>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 38.1 bits (87), Expect(2) = 9e-07
 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIF---KACLR-KSPLAKDIDLSALAKYTQGFSVADI 431
           ALLRPGRL+  + I LPD   R QI     A +R    L+ D+D+  LA  T+ FS A++
Sbjct: 382 ALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAEL 441

Query: 430 TEICQRA 410
             + + A
Sbjct: 442 EGLVRAA 448



 Score = 34.3 bits (77), Expect(2) = 9e-07
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL+++DG+     + +IG TNRPD+ID
Sbjct: 354 LLSKIDGVEQLNNILVIGMTNRPDLID 380

---

>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 38.1 bits (87), Expect(2) = 9e-07
 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIF---KACLR-KSPLAKDIDLSALAKYTQGFSVADI 431
           ALLRPGRL+  + I LPD   R QI     A +R    L+ D+D+  LA  T+ FS A++
Sbjct: 382 ALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAEL 441

Query: 430 TEICQRA 410
             + + A
Sbjct: 442 EGLVRAA 448



 Score = 34.3 bits (77), Expect(2) = 9e-07
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL+++DG+     + +IG TNRPD+ID
Sbjct: 354 LLSKIDGVEQLNNILVIGMTNRPDLID 380

---

>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein|
           6) (TBP-6)
          Length = 405

 Score = 40.0 bits (92), Expect(2) = 9e-07
 Identities = 19/47 (40%), Positives = 31/47 (65%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAK 461
           PALLR GRLD+ I  P+P+ ++R +I +   RK  ++ D++   LA+
Sbjct: 324 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 370



 Score = 32.3 bits (72), Expect(2) = 9e-07
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG      V +I ATNR DI+DP
Sbjct: 297 LLNQLDGFQPNMQVKVIAATNRVDILDP 324

---

>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding|
           homolog 5)
          Length = 437

 Score = 45.4 bits (106), Expect(2) = 1e-06
 Identities = 23/64 (35%), Positives = 35/64 (54%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGR+D+ I    PD+ ++ +I      K  L++D++L  L       S ADI  +
Sbjct: 336 PALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAM 395

Query: 421 CQRA 410
           C  A
Sbjct: 396 CTEA 399



 Score = 26.6 bits (57), Expect(2) = 1e-06
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL ++DG + +  V +I ATN+ + +DP
Sbjct: 309 LLNQLDGFDDRGDVKVIMATNKIETLDP 336

---

>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 824

 Score = 39.7 bits (91), Expect(2) = 2e-06
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFK---ACLRK-SPLAKDIDLSALAKYTQGFSVADI 431
           ALLRPGRL+  + + LPD   R QI K   A +R+ + +  ++DL  ++K T+ FS A++
Sbjct: 459 ALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAEL 518

Query: 430 TEICQRA 410
             + + A
Sbjct: 519 EGLVRAA 525



 Score = 32.0 bits (71), Expect(2) = 2e-06
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL++MDG+     + +IG TNR D+ID
Sbjct: 431 LLSKMDGVEQLNNILVIGMTNRRDMID 457

---

>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog|
          Length = 389

 Score = 38.5 bits (88), Expect(2) = 2e-06
 Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIP-LPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITE 425
           PALLRPGRLD+ I  P   D   R  +F+    K  L+ ++DL          S A I  
Sbjct: 288 PALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAA 347

Query: 424 ICQRACKYAI 395
           I Q A   A+
Sbjct: 348 IMQDAGLLAV 357



 Score = 32.7 bits (73), Expect(2) = 2e-06
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLT+MDG +    V +I ATNR D +DP
Sbjct: 261 LLTQMDGFDQGANVKVIMATNRADTLDP 288

---

>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316|
          Length = 609

 Score = 36.6 bits (83), Expect(2) = 3e-06
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL+E+DG+   + V +IGA+NR D+IDP
Sbjct: 396 LLSEIDGVEGLENVIVIGASNREDMIDP 423



 Score = 33.9 bits (76), Expect(2) = 3e-06
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 500
           PA+LRPGRLD  I I  PD ++   I+   L +S
Sbjct: 423 PAILRPGRLDVKIKIERPDAEAAQDIYSKYLTES 456

---

>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 21/57 (36%), Positives = 38/57 (66%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRA 410
           R ++ I+IPLPD+D+R ++ +  +  +P + +I+   LA  T+GFS AD+  +C+ A
Sbjct: 352 RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTA 408

---

>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c|
          Length = 609

 Score = 36.6 bits (83), Expect(2) = 9e-06
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL+E+DG+   + V +IGA+NR D+IDP
Sbjct: 396 LLSEIDGVEGLENVIVIGASNREDMIDP 423



 Score = 32.3 bits (72), Expect(2) = 9e-06
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACL 509
           PA+LRPGRLD  I I  PD ++   I+   L
Sbjct: 423 PAILRPGRLDVKIKIERPDAEAAQDIYSKYL 453

---

>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175|
          Length = 609

 Score = 36.6 bits (83), Expect(2) = 9e-06
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL+E+DG+   + V +IGA+NR D+IDP
Sbjct: 396 LLSEIDGVEGLENVIVIGASNREDMIDP 423



 Score = 32.3 bits (72), Expect(2) = 9e-06
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACL 509
           PA+LRPGRLD  I I  PD ++   I+   L
Sbjct: 423 PAILRPGRLDVKIKIERPDAEAAQDIYSKYL 453

---

>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive|
           fusion protein 2) (NEM-sensitive fusion protein 2)
           (dNsf-2)
          Length = 752

 Score = 38.5 bits (88), Expect(2) = 1e-05
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK----SPLAKDIDLSALAKYTQGFSVADI 431
           ALLRPGRL+  + I LP+   R QI     ++    + +A D+D + +A  T+ FS A++
Sbjct: 387 ALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAEL 446

Query: 430 TEICQRA 410
             + + A
Sbjct: 447 EGLVRAA 453



 Score = 30.0 bits (66), Expect(2) = 1e-05
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LL ++DG+     + +IG TNR D+ID
Sbjct: 359 LLAKIDGVEQLNNILVIGMTNRRDMID 385

---

>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive|
           fusion protein 1) (NEM-sensitive fusion protein 1)
           (dNsf-1) (Protein comatose)
          Length = 745

 Score = 35.8 bits (81), Expect(2) = 2e-05
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK----SPLAKDIDLSALAKYTQGFSVADI 431
           ALLRPGRL+  + I LP+   R QI     ++    + +  D+D   +A  T+ FS A++
Sbjct: 382 ALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAEL 441

Query: 430 TEICQRA 410
             + + A
Sbjct: 442 EGLVRAA 448



 Score = 32.3 bits (72), Expect(2) = 2e-05
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLT++DG++    + +IG TNR D+ID
Sbjct: 354 LLTKIDGVDQLNNILVIGMTNRRDMID 380

---

>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494|
          Length = 371

 Score = 34.3 bits (77), Expect(2) = 4e-05
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -1

Query: 601 PALLRPG---RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADI 431
           PA+L P    R ++ I   LP+ + R +I +   +K PL    +L    + T+GFS  DI
Sbjct: 267 PAMLDPAIRSRFEEEIEFKLPNDEERLKIMELYAKKMPLPVKANLKEFVEKTKGFSGRDI 326

Query: 430 TE 425
            E
Sbjct: 327 KE 328



 Score = 32.7 bits (73), Expect(2) = 4e-05
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LLTE+DG+   + V  I ATN P ++DP
Sbjct: 245 LLTELDGIKENEGVVTIAATNNPAMLDP 272

---

>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 41.2 bits (95), Expect(2) = 8e-05
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKD-IDLSALAKYTQGFSVADITEICQRA 410
           RL +   + LP  D R++I    L+ + L +D  DL  +A  T+GFS +D+ E+C+ A
Sbjct: 248 RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREA 305



 Score = 24.6 bits (52), Expect(2) = 8e-05
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 680 LTEMDGMNAKKTVFIIGATNRPDIID 603
           +T  DG+     V IIGATNR + ID
Sbjct: 217 MTLWDGLLNNGRVMIIGATNRINDID 242

---

>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 40.8 bits (94), Expect(2) = 1e-04
 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
 Frame = -1

Query: 589 RPGRLDQLI--------YIPLPDVDSRHQIFK--ACLRKSPLAKDIDLSALAKYTQGFSV 440
           RP  LD+ +        Y+ LP+ ++R  + K   C + SPL +  +L+ LA+ T G+S 
Sbjct: 488 RPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQK-ELAQLARMTDGYSG 546

Query: 439 ADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYAR 260
           +D+T + + A    I                 P             IR + F ES+K  +
Sbjct: 547 SDLTALAKDAALGPI-------------RELKPEQVKNMSASEMRNIRLSDFTESLKKIK 593

Query: 259 RSVSDADIRKY 227
           RSVS   +  Y
Sbjct: 594 RSVSPQTLEAY 604



 Score = 24.6 bits (52), Expect(2) = 1e-04
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -3

Query: 680 LTEMDGMNAK--KTVFIIGATNRPDIID 603
           L E DG+ +     V ++GATNRP  +D
Sbjct: 466 LIEFDGVQSAGDDRVLVMGATNRPQELD 493

---

>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 40.8 bits (94), Expect(2) = 1e-04
 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
 Frame = -1

Query: 589 RPGRLDQLI--------YIPLPDVDSRHQIFK--ACLRKSPLAKDIDLSALAKYTQGFSV 440
           RP  LD+ +        Y+ LP+ ++R  + K   C + SPL +  +L+ LA+ T G+S 
Sbjct: 486 RPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQK-ELAQLARMTDGYSG 544

Query: 439 ADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYAR 260
           +D+T + + A    I                 P             IR + F ES+K  +
Sbjct: 545 SDLTALAKDAALGPI-------------RELKPEQVKNMSASEMRNIRLSDFTESLKKIK 591

Query: 259 RSVSDADIRKY 227
           RSVS   +  Y
Sbjct: 592 RSVSPQTLEAY 602



 Score = 24.6 bits (52), Expect(2) = 1e-04
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -3

Query: 680 LTEMDGMNAK--KTVFIIGATNRPDIID 603
           L E DG+ +     V ++GATNRP  +D
Sbjct: 464 LIEFDGVQSAGDDRVLVMGATNRPQELD 491

---

>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)|
          Length = 69

 Score = 38.5 bits (88), Expect(2) = 3e-04
 Identities = 20/47 (42%), Positives = 26/47 (55%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAK 461
           PAL+RPGR  + IY   P +  R  IFK  LR   L K ++   LA+
Sbjct: 15  PALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLAR 61



 Score = 25.8 bits (55), Expect(2) = 3e-04
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 644 VFIIGATNRPDIIDP 600
           V ++  TNRPD++DP
Sbjct: 1   VVVLAGTNRPDVLDP 15

---

>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A|
          Length = 380

 Score = 40.4 bits (93), Expect(2) = 4e-04
 Identities = 20/68 (29%), Positives = 38/68 (55%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           A+LR  R+    ++ LP+   R +I +  L    L+  I+L  +A  ++G+S +D+ E+C
Sbjct: 249 AILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELC 306

Query: 418 QRACKYAI 395
           + A  Y +
Sbjct: 307 RDAAMYRV 314



 Score = 23.1 bits (48), Expect(2) = 4e-04
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -3

Query: 668 DGMNAKKT--VFIIGATNRPDIID 603
           DG++  +   V ++GATNRP  +D
Sbjct: 224 DGLDTGENSQVMVMGATNRPQDVD 247

---

>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B|
          Length = 362

 Score = 40.8 bits (94), Expect(2) = 4e-04
 Identities = 23/63 (36%), Positives = 35/63 (55%)
 Frame = -1

Query: 598 ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEIC 419
           A+LR  R+    +I  P+V  R  I K  L    +   ++LS +AK T GFS +D+ E+C
Sbjct: 250 AILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMC 307

Query: 418 QRA 410
           + A
Sbjct: 308 RDA 310



 Score = 22.7 bits (47), Expect(2) = 4e-04
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 644 VFIIGATNRPDIID 603
           V I+GATNRP  +D
Sbjct: 235 VIIMGATNRPQDLD 248

---

>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)|
          Length = 448

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 23/64 (35%), Positives = 34/64 (53%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEI 422
           PAL+RPGR+D+ I    PD  ++ +IF     K  L +D++L  L +     S A+I  I
Sbjct: 346 PALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAI 405

Query: 421 CQRA 410
              A
Sbjct: 406 VSEA 409

---

>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46|
          Length = 506

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
 Frame = -1

Query: 676 LRWMA*MLRKPSSSLVLPTGQT--S*TPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 503
           + W++    K S   V+ T     S  P LLR GR D++ +I LPD+  R  IFK  L+K
Sbjct: 367 ITWLS---EKKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKK 423

Query: 502 -SPLA-KDIDLSALAKYTQGFSVADITEICQRACKYA 398
             P +    D   L+  +  FS A+I E    A   A
Sbjct: 424 IRPKSWSTYDTEILSAQSNRFSGAEIEESIYEAMHIA 460

---

>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 36.6 bits (83), Expect(2) = 0.006
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRA 410
           R+    +I  P +  R  I K  L+   + + +DL  +A+ T GFS +D+ E+C+ A
Sbjct: 250 RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDA 306



 Score = 22.7 bits (47), Expect(2) = 0.006
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -3

Query: 668 DGMNAKKT--VFIIGATNRPDIID 603
           DG++   +  V ++GATNRP  +D
Sbjct: 221 DGLDTDHSCQVIVMGATNRPQDLD 244

---

>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 36.6 bits (83), Expect(2) = 0.006
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRA 410
           R+    +I  P +  R  I K  L+   + + +DL  +A+ T GFS +D+ E+C+ A
Sbjct: 250 RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDA 306



 Score = 22.7 bits (47), Expect(2) = 0.006
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -3

Query: 668 DGMNAKKT--VFIIGATNRPDIID 603
           DG++   +  V ++GATNRP  +D
Sbjct: 221 DGLDTDHSCQVIVMGATNRPQDLD 244

---

>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 36.6 bits (83), Expect(2) = 0.006
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSVADITEICQRA 410
           R+    +I  P +  R  I K  L+   + + +DL  +A+ T GFS +D+ E+C+ A
Sbjct: 250 RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDA 306



 Score = 22.7 bits (47), Expect(2) = 0.006
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -3

Query: 668 DGMNAKKT--VFIIGATNRPDIID 603
           DG++   +  V ++GATNRP  +D
Sbjct: 221 DGLDTDHSCQVIVMGATNRPQDLD 244

---

>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a|
          Length = 437

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSP-LAKDIDLSALAKYTQGFSVADITEI 422
           R ++ IYIPLP+  +R Q+F+  L  +P    D ++  LA+ T+G+S ADI+ I
Sbjct: 284 RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISII 337

---

>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)|
           (VPS4-1)
          Length = 437

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSP-LAKDIDLSALAKYTQGFSVADITEI 422
           R ++ IYIPLP+  +R Q+F+  L  +P    D ++  LA+ T+G+S ADI+ I
Sbjct: 284 RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISII 337

---

>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)|
          Length = 754

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLA-KDIDLSALAKYTQGFSVADITEICQRA 410
           R  + +YIPLPD ++R    K  + K   + +D+D   + + T+GFS +D+T + + A
Sbjct: 638 RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEA 695

---

>SAP1_YEAST (P39955) Protein SAP1|
          Length = 897

 Score = 37.4 bits (85), Expect = 0.043
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = -1

Query: 562 YIPLPDVDSRHQIFKACL--RKSPLAKDIDLSALAKYTQGFSVADITEICQRA 410
           YIPLP+  +RH  FK  L  +K  L +  D   L K T+G+S +DIT + + A
Sbjct: 787 YIPLPEDQTRHVQFKKLLSHQKHTLTES-DFDELVKITEGYSGSDITSLAKDA 838

---

>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)|
          Length = 497

 Score = 37.0 bits (84), Expect = 0.056
 Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
 Frame = -1

Query: 595 LLRPGRLDQLIYIPLPDVDSRHQIFKACLR--KSPLAKDIDLSALAKYTQGFSVADITE 425
           ++R GR D++ ++ LP+++ R +IFK  ++  +    K  D   LA+ ++ FS A+I +
Sbjct: 377 IIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKKLAQLSESFSGAEIRQ 435

---

>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants|
          Length = 432

 Score = 37.0 bits (84), Expect = 0.056
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPL-AKDIDLSALAKYTQGFSVADITEICQRA 410
           R ++ IYIPLP+  +R ++F+  + K P      D   LAK T G+S +DI+ + + A
Sbjct: 285 RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDA 342

---

>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 36.2 bits (82), Expect = 0.096
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG+N    V  IGATN P+++D
Sbjct: 248 LLTEMDGINQNWGVVTIGATNNPELLD 274

---

>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 36.2 bits (82), Expect = 0.096
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIID 603
           LLTEMDG+N    V  IGATN P+++D
Sbjct: 248 LLTEMDGINQNWGVVTIGATNNPELLD 274

---

>YCF2_MARPO (P09975) Protein ycf2|
          Length = 2136

 Score = 32.7 bits (73), Expect(2) = 0.11
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKY---TQGFSVADI 431
            PAL+ P RLD++I + L ++  R + F   L+K       +L  L ++   T G+++ D+
Sbjct: 1529 PALISPNRLDKIINVRLFNISQRKKQFPLLLKKKNFQLKENLFFLNEFGSRTMGYNLRDL 1588

Query: 430  TEI 422
            + +
Sbjct: 1589 SAL 1591



 Score = 21.9 bits (45), Expect(2) = 0.11
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 653  KKTVFIIGATNRPDIIDP 600
            K  + +IG+T+ P  +DP
Sbjct: 1512 KNNIIVIGSTHLPKKVDP 1529

---

>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13|
           protein) (DOA4-independent degradation protein 6)
          Length = 437

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSP--LAKDIDLSALAKYTQGFSVADITEICQRA 410
           R ++ IYIPLPD+ +R  +F+  +  +P  L K+ D   L   T+G+S +DI  + + A
Sbjct: 289 RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKE-DYRTLGAMTEGYSGSDIAVVVKDA 346

---

>YCF2_PSINU (Q8WHW9) Protein ycf2|
          Length = 2313

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLS---ALAKYTQGFSVADI 431
            P+ + P RLDQLI I   ++  R + F A LR        DLS    L   T+G+S  D+
Sbjct: 1731 PSFISPNRLDQLINIRRLNIHQREREFLALLRVKGFYYKGDLSHLGELGSITRGYSKRDL 1790

Query: 430  T 428
            T
Sbjct: 1791 T 1791

---

>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLA-KDIDLSALAKYTQGFSVADITEICQRA 410
           R ++ IYIPLP+  +R  +F+  L  +  +  + D   L + T G+S ADI+ I + A
Sbjct: 291 RFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDA 348

---

>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 34.3 bits (77), Expect = 0.36
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -1

Query: 580 RLDQLIYIPLPDVDSRHQIFKACLRKSPLA-KDIDLSALAKYTQGFSVADITEICQRA 410
           R ++ IYIPLP+  +R  +FK  L  +  +  + D   L + T G+S ADI+ I + A
Sbjct: 291 RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDA 348

---

>YCF2_ANTFO (Q859W7) Protein ycf2|
          Length = 2392

 Score = 29.6 bits (65), Expect(2) = 1.3
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPL---AKDIDLSALAKYTQGFSVADI 431
            PAL+ P RLD+L+ I + D+  R + F   L         K +  +  A  T G++  D+
Sbjct: 1783 PALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKNKLLHFNEFAYRTMGYNGRDL 1842

Query: 430  TEI 422
              +
Sbjct: 1843 VAL 1845



 Score = 21.2 bits (43), Expect(2) = 1.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 650  KTVFIIGATNRPDIIDP 600
            K + IIG+T+ P  +DP
Sbjct: 1767 KGIIIIGSTHLPRKVDP 1783

---

>YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC intergenic|
            region (ORF2971) (ORFB)
          Length = 2971

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
 Frame = -1

Query: 601  PALLRPGRLDQLIYIP------LPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSV 440
            PAL RPGRLD+ I +P      + +    ++IFK+    S   K I L+ +   T   + 
Sbjct: 2326 PALRRPGRLDETICLPNIHTSNILNFTKNYEIFKSAKDTSNFGKKIILNEMQNLTTTSTQ 2385

Query: 439  ADITEIC 419
             D+   C
Sbjct: 2386 RDMYLSC 2392

---

>ROK1_CANGA (Q6FN65) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)|
          Length = 565

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +2

Query: 434 ISNAEPLGVLGKSTQINILGQR-RLPEASFEDLVPRIDIRKRDVDKLIK 577
           I+  E    L KS + NI G+   LP  SFEDL+ R  + KR ++ LI+
Sbjct: 93  ITTKEQASALRKSYKGNITGEDIPLPIGSFEDLISRFSLDKRLLNNLIE 141

---

>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 42)
            (Ubiquitin-specific-processing protease 42)
            (Deubiquitinating enzyme 42)
          Length = 1325

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 181  RSRIHETAAASGQRPGTCGCRRHSHYDAHTSSTPRSGQP*SLQPHQPR 324
            R+ +HE       R G  GC      + H  S+PR+G P +L PH  R
Sbjct: 1085 RAGLHERPHKDHNR-GRRGCEPARERERHRPSSPRAGAPHALAPHPDR 1131

---

>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 449

 Score = 25.8 bits (55), Expect(2) = 2.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 601 PALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLS 473
           PAL+RPGR+D   Y+     +   ++F      SP   D DLS
Sbjct: 354 PALVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMAD-DLS 395



 Score = 24.3 bits (51), Expect(2) = 2.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 683 LLTEMDGMNAKKTVFIIGATNRPDIIDP 600
           LL  +DG+ +     I   TN P+ +DP
Sbjct: 327 LLNALDGVTSSDERIIFMTTNHPEKLDP 354

---

>LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3.3.13)|
           (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase)
           (Late nodulin 56) (N-56)
          Length = 565

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = -1

Query: 649 KPSSSLVLPTGQTS*TPALLRPGRLDQLIY-IPLPDVDSRHQIFKACLRKSPLAKDIDLS 473
           K ++ + +  G+ S + AL +  RL++L Y +   +VDS    FKA   K  +  D+DL 
Sbjct: 361 KRTTRIGIVLGKLSGSQALRK--RLEELGYDLKEDEVDSVFWQFKAMAEKKKVVTDVDLK 418

Query: 472 ALAKY 458
           AL  Y
Sbjct: 419 ALVSY 423

---

>RL17_AQUAE (O66482) 50S ribosomal protein L17|
          Length = 118

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +2

Query: 446 EPLGVLGKSTQINILGQR--RLPEAS-----FEDLVPRIDIRKRDVDKLIKTPWPKQGRG 604
           EPL  L K   ++   Q   RLP+       FED+ PR + R     ++IK P+ ++G G
Sbjct: 49  EPLVELAKEGTLHARRQALSRLPDKPAIKKLFEDIAPRFEGRNGGYVRIIKLPYRRRGDG 108

---

>CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)|
          Length = 1096

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 19/47 (40%), Positives = 20/47 (42%)
 Frame = +1

Query: 205 AASGQRPGTCGCRRHSHYDAHTSSTPRSGQP*SLQPHQPRPPPSLQG 345
           AA G   G  G  RH H+ AH        QP    P  P PPP L G
Sbjct: 70  AALGAYSGGAGPTRH-HHPAHHFHHHGQAQPGLHPPLPPPPPPQLPG 115


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,233,507
Number of Sequences: 219361
Number of extensions: 1207783
Number of successful extensions: 4308
Number of sequences better than 10.0: 236
Number of HSP's better than 10.0 without gapping: 3798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4264
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6769072002
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---