>HMT1_MAIZE (Q9FUN0) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase 1)
           (SMM:Hcy S-methyltransferase 1) (ZmHMT-1)
          Length = 323

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 332 WDRRPAPWGPMACVLHHGIGSLARRRIFAGGSVASHLCQ 448
           WD R   W P+ C+ H    +LA+R   AG S+    C+
Sbjct: 266 WDGRAKRWLPVECLGHKSFDALAKRWQEAGASLIGGCCR 304

>DDG_SHIFL (P0ACV3) Protein ddg|
          Length = 306

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 299 LFWFSVSHLWRWDRRPAPWGPMACVLHHGIGSLARRRIFAGGSVASHLCQQC 454
           L WF +  LW W + P    P+ C L   IG++AR  +    S+A    + C
Sbjct: 18  LTWFGLGVLWLWVQLPY---PVLCFLGTRIGAMARPFLKRRESIARKNLELC 66

>DDG_ECOLI (P0ACV2) Protein ddg|
          Length = 306

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 299 LFWFSVSHLWRWDRRPAPWGPMACVLHHGIGSLARRRIFAGGSVASHLCQQC 454
           L WF +  LW W + P    P+ C L   IG++AR  +    S+A    + C
Sbjct: 18  LTWFGLGVLWLWVQLPY---PVLCFLGTRIGAMARPFLKRRESIARKNLELC 66

>PSBB_NEPOL (Q9TKW4) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 266 LQSRGILESPPLFWFSVSHLW 328
           LQS G+  S P  WF+  HLW
Sbjct: 437 LQSDGVFRSSPRGWFTFGHLW 457

>RBL2B_HUMAN (Q9UNT1) Rab-like protein 2B|
          Length = 228

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 150 KATYMQLRDKSTWLTYLHSYRSKEPCCIDARKV 248
           K TY   R+ STW T L  +R + PC + A K+
Sbjct: 106 KVTY---RNLSTWYTELREFRPEIPCIVVANKI 135

>RBL2A_HUMAN (Q9UBK7) Rab-like protein 2A|
          Length = 228

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 150 KATYMQLRDKSTWLTYLHSYRSKEPCCIDARKV 248
           K TY   R+ STW T L  +R + PC + A K+
Sbjct: 106 KVTY---RNLSTWYTELREFRPEIPCIVVANKI 135

>TECT3_MOUSE (Q8R2Q6) Tectonic-3 precursor|
          Length = 595

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +1

Query: 205 ATDRRSLAASMQGRCTLPVSPSVS-----WHPGEPAFVLVLSQSSVAMGSQASALGTHGM 369
           AT+ ++LAA   G+    + P        +  G+P      S S V++  Q +A+G  G+
Sbjct: 168 ATNFQALAAEFGGQSFPSMPPETQPPVLFYRAGDPILTYYPSWSVVSLLRQPAAVGAGGL 227

Query: 370 CAPS 381
           CA S
Sbjct: 228 CAES 231


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,448,417
Number of Sequences: 219361
Number of extensions: 1967565
Number of successful extensions: 4752
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4752
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)