| Clone Name | rbags24n16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192557.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1485 Score = 369 bits (186), Expect = 8e-99 Identities = 350/405 (86%) Strand = Plus / Minus Query: 256 gttgggccttggagactggcggtatggagaagcgtgcggaccgtaggagaggctcctcat 315 |||||||||||| ||||| ||||| || || |||||||| || ||||||||||||||||| Sbjct: 1467 gttgggccttggggactgccggtacggggaggcgtgcgggccataggagaggctcctcat 1408 Query: 316 tggctgcacgccgttccgtgcaaaggtgctctgtgccttcatgctctggctaccatttgg 375 ||||||| ||||| || || ||||||| ||||||||||||||| ||||| ||| |||| Sbjct: 1407 tggctgctgcccgttgcgcgcgaaggtgccctgtgccttcatgctttggctgccaattgg 1348 Query: 376 gttgttgaggcttgcggcacgttcttgacgcatggactggaagaagtaggaggagctagc 435 |||| ||||||||||||||| || || ||||||| ||||||||||| |||||||| || Sbjct: 1347 gttgccgaggcttgcggcacgctcctgctgcatggattggaagaagtatgaggagctggc 1288 Query: 436 catgtctttcaggtttggaagaggcttcaggacttcaaccacttggctcatgagaggcct 495 ||||||||| ||||| | || ||||| |||||||| |||||||| |||||||||||||| Sbjct: 1287 catgtctttgaggttcaggaggggcttgaggacttcgaccacttgactcatgagaggcct 1228 Query: 496 agccttaggatcccggctaaggcaagcatgtgccagctgagccgtcttctgagcgccttt 555 ||||| ||||||||| ||||||| ||| ||||||||||| ||||||||||||||| | Sbjct: 1227 ggccttgggatcccggttaaggcaggcacaggccagctgagctgtcttctgagcgcctct 1168 Query: 556 tatggagaaatttccctctagacggggatctacgagcctatagaatcgccttctttctcc 615 ||||||||| || ||||| |||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 1167 tatggagaagttcccctccagacgggggtctacaagcctatagaatcgccgtctttctcc 1108 Query: 616 aagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660 ||||||||| || |||||||||||||| ||||| || ||||||| Sbjct: 1107 aagataaggacgcgcccattcaaccaggttgtgttcaccgtttgg 1063
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 369 bits (186), Expect = 8e-99 Identities = 350/405 (86%) Strand = Plus / Plus Query: 256 gttgggccttggagactggcggtatggagaagcgtgcggaccgtaggagaggctcctcat 315 |||||||||||| ||||| ||||| || || |||||||| || ||||||||||||||||| Sbjct: 22915408 gttgggccttggggactgccggtacggggaggcgtgcgggccataggagaggctcctcat 22915467 Query: 316 tggctgcacgccgttccgtgcaaaggtgctctgtgccttcatgctctggctaccatttgg 375 ||||||| ||||| || || ||||||| ||||||||||||||| ||||| ||| |||| Sbjct: 22915468 tggctgctgcccgttgcgcgcgaaggtgccctgtgccttcatgctttggctgccaattgg 22915527 Query: 376 gttgttgaggcttgcggcacgttcttgacgcatggactggaagaagtaggaggagctagc 435 |||| ||||||||||||||| || || ||||||| ||||||||||| |||||||| || Sbjct: 22915528 gttgccgaggcttgcggcacgctcctgctgcatggattggaagaagtatgaggagctggc 22915587 Query: 436 catgtctttcaggtttggaagaggcttcaggacttcaaccacttggctcatgagaggcct 495 ||||||||| ||||| | || ||||| |||||||| |||||||| |||||||||||||| Sbjct: 22915588 catgtctttgaggttcaggaggggcttgaggacttcgaccacttgactcatgagaggcct 22915647 Query: 496 agccttaggatcccggctaaggcaagcatgtgccagctgagccgtcttctgagcgccttt 555 ||||| ||||||||| ||||||| ||| ||||||||||| ||||||||||||||| | Sbjct: 22915648 ggccttgggatcccggttaaggcaggcacaggccagctgagctgtcttctgagcgcctct 22915707 Query: 556 tatggagaaatttccctctagacggggatctacgagcctatagaatcgccttctttctcc 615 ||||||||| || ||||| |||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 22915708 tatggagaagttcccctccagacgggggtctacaagcctatagaatcgccgtctttctcc 22915767 Query: 616 aagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660 ||||||||| || |||||||||||||| ||||| || ||||||| Sbjct: 22915768 aagataaggacgcgcccattcaaccaggttgtgttcaccgtttgg 22915812
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 369 bits (186), Expect = 8e-99 Identities = 350/405 (86%) Strand = Plus / Plus Query: 256 gttgggccttggagactggcggtatggagaagcgtgcggaccgtaggagaggctcctcat 315 |||||||||||| ||||| ||||| || || |||||||| || ||||||||||||||||| Sbjct: 118965 gttgggccttggggactgccggtacggggaggcgtgcgggccataggagaggctcctcat 119024 Query: 316 tggctgcacgccgttccgtgcaaaggtgctctgtgccttcatgctctggctaccatttgg 375 ||||||| ||||| || || ||||||| ||||||||||||||| ||||| ||| |||| Sbjct: 119025 tggctgctgcccgttgcgcgcgaaggtgccctgtgccttcatgctttggctgccaattgg 119084 Query: 376 gttgttgaggcttgcggcacgttcttgacgcatggactggaagaagtaggaggagctagc 435 |||| ||||||||||||||| || || ||||||| ||||||||||| |||||||| || Sbjct: 119085 gttgccgaggcttgcggcacgctcctgctgcatggattggaagaagtatgaggagctggc 119144 Query: 436 catgtctttcaggtttggaagaggcttcaggacttcaaccacttggctcatgagaggcct 495 ||||||||| ||||| | || ||||| |||||||| |||||||| |||||||||||||| Sbjct: 119145 catgtctttgaggttcaggaggggcttgaggacttcgaccacttgactcatgagaggcct 119204 Query: 496 agccttaggatcccggctaaggcaagcatgtgccagctgagccgtcttctgagcgccttt 555 ||||| ||||||||| ||||||| ||| ||||||||||| ||||||||||||||| | Sbjct: 119205 ggccttgggatcccggttaaggcaggcacaggccagctgagctgtcttctgagcgcctct 119264 Query: 556 tatggagaaatttccctctagacggggatctacgagcctatagaatcgccttctttctcc 615 ||||||||| || ||||| |||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 119265 tatggagaagttcccctccagacgggggtctacaagcctatagaatcgccgtctttctcc 119324 Query: 616 aagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660 ||||||||| || |||||||||||||| ||||| || ||||||| Sbjct: 119325 aagataaggacgcgcccattcaaccaggttgtgttcaccgtttgg 119369
>dbj|AK103037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E11, full insert sequence Length = 2501 Score = 369 bits (186), Expect = 8e-99 Identities = 350/405 (86%) Strand = Plus / Minus Query: 256 gttgggccttggagactggcggtatggagaagcgtgcggaccgtaggagaggctcctcat 315 |||||||||||| ||||| ||||| || || |||||||| || ||||||||||||||||| Sbjct: 1656 gttgggccttggggactgccggtacggggaggcgtgcgggccataggagaggctcctcat 1597 Query: 316 tggctgcacgccgttccgtgcaaaggtgctctgtgccttcatgctctggctaccatttgg 375 ||||||| ||||| || || ||||||| ||||||||||||||| ||||| ||| |||| Sbjct: 1596 tggctgctgcccgttgcgcgcgaaggtgccctgtgccttcatgctttggctgccaattgg 1537 Query: 376 gttgttgaggcttgcggcacgttcttgacgcatggactggaagaagtaggaggagctagc 435 |||| ||||||||||||||| || || ||||||| ||||||||||| |||||||| || Sbjct: 1536 gttgccgaggcttgcggcacgctcctgctgcatggattggaagaagtatgaggagctggc 1477 Query: 436 catgtctttcaggtttggaagaggcttcaggacttcaaccacttggctcatgagaggcct 495 ||||||||| ||||| | || ||||| |||||||| |||||||| |||||||||||||| Sbjct: 1476 catgtctttgaggttcaggaggggcttgaggacttcgaccacttgactcatgagaggcct 1417 Query: 496 agccttaggatcccggctaaggcaagcatgtgccagctgagccgtcttctgagcgccttt 555 ||||| ||||||||| ||||||| ||| ||||||||||| ||||||||||||||| | Sbjct: 1416 ggccttgggatcccggttaaggcaggcacaggccagctgagctgtcttctgagcgcctct 1357 Query: 556 tatggagaaatttccctctagacggggatctacgagcctatagaatcgccttctttctcc 615 ||||||||| || ||||| |||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 1356 tatggagaagttcccctccagacgggggtctacaagcctatagaatcgccgtctttctcc 1297 Query: 616 aagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660 ||||||||| || |||||||||||||| ||||| || ||||||| Sbjct: 1296 aagataaggacgcgcccattcaaccaggttgtgttcaccgtttgg 1252
>gb|AY111890.1| Zea mays CL54662_1 mRNA sequence Length = 603 Score = 101 bits (51), Expect = 3e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 405 gcatggactggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttca 464 |||||||||||||| ||||||| ||||| |||||||| || ||||| | |||||||||| Sbjct: 388 gcatggactggaagtagtaggaagagctggccatgtccttgaggttctggagaggcttca 447 Query: 465 ggacttcaaccacttggctcatgagaggcctagccttaggatcccggctaaggcaagcat 524 | || || ||||| |||||||| |||||||||||||| || || ||||| ||||| |||| Sbjct: 448 gcacctccaccacctggctcatcagaggcctagccttggggtcacggctgaggcaggcat 507 Query: 525 gtgccag 531 | ||||| Sbjct: 508 gggccag 514 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 305 aggctcctcattggctgcacgccgttccgtgcaaaggtgctctgtgccttcatgctctgg 364 ||||||||||| |||||| |||||||| |||||||||||||| || |||||||| || Sbjct: 288 aggctcctcatgggctgctgcccgttccgcgcaaaggtgctctgcgctttcatgctttga 347 Query: 365 ctaccatttgggttg 379 || |||| ||||||| Sbjct: 348 ctgccatatgggttg 362
>gb|AY109566.1| Zea mays CL13678_1 mRNA sequence Length = 635 Score = 71.9 bits (36), Expect = 3e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 412 ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471 ||||||||||||||||| ||| |||||||| || ||||| | || ||||||||||| || Sbjct: 428 ctggaagaagtaggaggcgctcgccatgtccttgaggttctgcagcggcttcaggacctc 487 Query: 472 aaccacttggctcatgagaggcctagccttaggatcccggctaaggca 519 ||||| |||||||| || |||| ||||| || |||||||| ||||| Sbjct: 488 caccacctggctcatcaggggccgcgccttggggtcccggctcaggca 535
>gb|AY730335.1| Solanum tuberosum strain P6/210 clone BAC BA151m8, complete sequence Length = 41386 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 605 cttctttctccaagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660 |||||||| ||||||| ||| |||||||||||||| || ||||||||| | ||||| Sbjct: 13549 cttctttcaccaagatgaggtcgtgcccattcaacaaggttgtgctccccatttgg 13604 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 420 agtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaaccactt 479 ||||||| ||||| ||||||||||| || ||||| | ||||||| | |||||||||| | Sbjct: 13364 agtaggatgagctggccatgtctttaagatttggtaatggcttcaaggcttcaaccacat 13423 Query: 480 ggctcatgagaggcctagccttaggatcccggctaaggcaa 520 ||||| | ||| ||||| || ||||| |||||||||||| Sbjct: 13424 cactcatcataggtctagctttgggatcacggctaaggcaa 13464
>ref|XM_450601.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1399 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 417 agaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaacca 476 ||||||| ||||||||||||||||| || ||||| | || ||||| || || || |||| Sbjct: 982 agaagtacgaggagctagccatgtccttgaggttgagcagtggcttgagaacctctacca 923 Query: 477 cttggctcat 486 |||||||||| Sbjct: 922 cttggctcat 913
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 417 agaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaacca 476 ||||||| ||||||||||||||||| || ||||| | || ||||| || || || |||| Sbjct: 11739191 agaagtacgaggagctagccatgtccttgaggttgagcagtggcttgagaacctctacca 11739132 Query: 477 cttggctcat 486 |||||||||| Sbjct: 11739131 cttggctcat 11739122
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 417 agaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaacca 476 ||||||| ||||||||||||||||| || ||||| | || ||||| || || || |||| Sbjct: 173825 agaagtacgaggagctagccatgtccttgaggttgagcagtggcttgagaacctctacca 173766 Query: 477 cttggctcat 486 |||||||||| Sbjct: 173765 cttggctcat 173756
>dbj|AK064216.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-F06, full insert sequence Length = 1399 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 417 agaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaacca 476 ||||||| ||||||||||||||||| || ||||| | || ||||| || || || |||| Sbjct: 982 agaagtacgaggagctagccatgtccttgaggttgagcagtggcttgagaacctctacca 923 Query: 477 cttggctcat 486 |||||||||| Sbjct: 922 cttggctcat 913
>gb|BT013760.1| Lycopersicon esculentum clone 132643F, mRNA sequence Length = 1725 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Minus Query: 420 agtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaaccactt 479 ||||||| ||||| ||||||||||| || ||||| | ||||||| | |||| ||||||| Sbjct: 1308 agtaggatgagctggccatgtctttaagatttggtaatggcttcaaggcttctaccactt 1249 Query: 480 ggctcatgagaggcctagccttaggatcccggctaaggcaa 520 ||||| | ||||||| | || ||||| || ||||||||| Sbjct: 1248 cactcatcataggcctaactttgggatcacgactaaggcaa 1208 Score = 50.1 bits (25), Expect = 0.009 Identities = 48/56 (85%) Strand = Plus / Minus Query: 605 cttctttctccaagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660 |||||||| ||||||| ||| |||||||||||||| || ||||| ||| | ||||| Sbjct: 1123 cttctttcaccaagatgaggccgtgcccattcaacaaggttgtgttccccatttgg 1068
>ref|NM_110996.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G01300 mRNA, complete cds Length = 1942 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 412 ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471 ||||||| |||| || | |||||||||||| || |||| ||| |||||||| || ||||| Sbjct: 1549 ctggaagtagtaagaagcgctagccatgtccttgaggtgtgggagaggcttaagtacttc 1490 Query: 472 aaccactt 479 ||||||| Sbjct: 1489 caccactt 1482
>gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC T4P13 genomic sequence, complete sequence Length = 93735 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 412 ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471 ||||||| |||| || | |||||||||||| || |||| ||| |||||||| || ||||| Sbjct: 6174 ctggaagtagtaagaagcgctagccatgtccttgaggtgtgggagaggcttaagtacttc 6115 Query: 472 aaccactt 479 ||||||| Sbjct: 6114 caccactt 6107
>gb|AC010676.6|ATAC010676 Arabidopsis thaliana chromosome III BAC T22N4 genomic sequence, complete sequence Length = 58448 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 412 ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471 ||||||| |||| || | |||||||||||| || |||| ||| |||||||| || ||||| Sbjct: 47820 ctggaagtagtaagaagcgctagccatgtccttgaggtgtgggagaggcttaagtacttc 47761 Query: 472 aaccactt 479 ||||||| Sbjct: 47760 caccactt 47753
>gb|AY057584.1| Arabidopsis thaliana AT3g01300/T22N4_7 mRNA, complete cds Length = 1841 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 412 ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471 ||||||| |||| || | |||||||||||| || |||| ||| |||||||| || ||||| Sbjct: 1448 ctggaagtagtaagaagcgctagccatgtccttgaggtgtgggagaggcttaagtacttc 1389 Query: 472 aaccactt 479 ||||||| Sbjct: 1388 caccactt 1381
>gb|AY087034.1| Arabidopsis thaliana clone 30775 mRNA, complete sequence Length = 1923 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 412 ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471 ||||||| |||| || | |||||||||||| || |||| ||| |||||||| || ||||| Sbjct: 1549 ctggaagtagtaagaagcgctagccatgtccttgaggtgtgggagaggcttaagtacttc 1490 Query: 472 aaccactt 479 ||||||| Sbjct: 1489 caccactt 1482
>emb|AL683800.9| Mouse DNA sequence from clone RP23-405B8 on chromosome X, complete sequence Length = 198175 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 606 ttctttctccaagataagggc 626 ||||||||||||||||||||| Sbjct: 124836 ttctttctccaagataagggc 124856
>ref|NM_121512.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT5G15080 mRNA, complete cds Length = 2001 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 412 ctggaagaagtaggaggagctagccatgtctttcag 447 ||||||| |||| || ||||| |||||||||||||| Sbjct: 1603 ctggaagtagtaagaagagcttgccatgtctttcag 1568
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gccgtcttctgagcgccttt 555 |||||||||||||||||||| Sbjct: 598064 gccgtcttctgagcgccttt 598083
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tggcatctgctgatctgcct 140 |||||||||||||||||||| Sbjct: 13755753 tggcatctgctgatctgcct 13755734
>ref|XM_542068.2| PREDICTED: Canis familiaris similar to CG5645-PA (LOC484952), mRNA Length = 2127 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 gccttctttctccaagataa 622 |||||||||||||||||||| Sbjct: 393 gccttctttctccaagataa 374
>emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in linkage group 3, complete sequence Length = 168285 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 630 cccattcaaccagattgtgc 649 |||||||||||||||||||| Sbjct: 4637 cccattcaaccagattgtgc 4656
>emb|AL512384.9| Human DNA sequence from clone RP11-317E16 on chromosome 6 Contains the 3' end of the gene for sectretagogin (SECRET), the genes for novel H2A and H2B histone family members, H2A and H2B histone family pseudogenes, complete sequence Length = 49963 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 cccaacctttgaaccagtcatggt 227 |||||||||||||||| ||||||| Sbjct: 43051 cccaacctttgaaccaatcatggt 43028
>emb|AL391146.1|ATF2G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F2G14 (ESSA project) Length = 85992 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 412 ctggaagaagtaggaggagctagccatgtctttcag 447 ||||||| |||| || ||||| |||||||||||||| Sbjct: 73139 ctggaagtagtaagaagagcttgccatgtctttcag 73104
>gb|AC091785.5| Genomic sequence for Mus musculus, clone RP23-349P1, complete sequence Length = 178271 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 atggcatctgctgatctgcc 139 |||||||||||||||||||| Sbjct: 38172 atggcatctgctgatctgcc 38191
>gb|AC083843.5| Homo sapiens chromosome 8, clone RP11-157B5, complete sequence Length = 159032 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 atgagaggcctagccttagg 504 |||||||||||||||||||| Sbjct: 85276 atgagaggcctagccttagg 85295
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tggcatctgctgatctgcct 140 |||||||||||||||||||| Sbjct: 32281 tggcatctgctgatctgcct 32262
>gb|AY062520.1| Arabidopsis thaliana serine/threonine specific protein kinase-like (At5g15080; F2G14_200) mRNA, complete cds Length = 1950 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 412 ctggaagaagtaggaggagctagccatgtctttcag 447 ||||||| |||| || ||||| |||||||||||||| Sbjct: 1603 ctggaagtagtaagaagagcttgccatgtctttcag 1568
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tggcatctgctgatctgcct 140 |||||||||||||||||||| Sbjct: 13750728 tggcatctgctgatctgcct 13750709
>emb|BX831629.1|CNS09ZO6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZD07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1806 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 412 ctggaagaagtaggaggagctagccatgtctttcag 447 ||||||| |||| || ||||| |||||||||||||| Sbjct: 1515 ctggaagtagtaagaagagcttgccatgtctttcag 1480
>emb|BX830789.1|CNS09YQZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS23ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1934 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 412 ctggaagaagtaggaggagctagccatgtctttcag 447 ||||||| |||| || ||||| |||||||||||||| Sbjct: 1547 ctggaagtagtaagaagagcttgccatgtctttcag 1512
>gb|BT002577.1| Arabidopsis thaliana serine/threonine specific protein kinase-like (At5g15080) mRNA, complete cds Length = 1529 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 412 ctggaagaagtaggaggagctagccatgtctttcag 447 ||||||| |||| || ||||| |||||||||||||| Sbjct: 1317 ctggaagtagtaagaagagcttgccatgtctttcag 1282
>emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chromosome 13, complete sequence Length = 206864 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 417 agaagtaggaggagctagccatgt 440 |||||| ||||||||||||||||| Sbjct: 42705 agaagtgggaggagctagccatgt 42728
>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391, complete sequence Length = 98505 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 472 aaccacttggctcatgagaggcctagccttaggatcccggctaaggca 519 |||||||| ||||| | ||||||||| || ||||| ||||||||||| Sbjct: 63254 aaccacttcactcatcaaaggcctagcttttggatcgcggctaaggca 63301
>dbj|AP006129.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT27K02, TM0225, complete sequence Length = 70805 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 472 aaccacttggctcatgagaggcctagccttaggatcccggctaaggca 519 |||||||| ||||| | ||||||||| || ||||| ||||||||||| Sbjct: 20171 aaccacttcactcatcaaaggcctagcttttggatcgcggctaaggca 20218 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,804,378 Number of Sequences: 3902068 Number of extensions: 4804378 Number of successful extensions: 85305 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85166 Number of HSP's gapped (non-prelim): 139 length of query: 660 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 637 effective length of database: 17,143,297,704 effective search space: 10920280637448 effective search space used: 10920280637448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)