ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24n16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_192557.1| Oryza sativa (japonica cultivar-group), predic... 369 8e-99
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 369 8e-99
3dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 369 8e-99
4dbj|AK103037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 369 8e-99
5gb|AY111890.1| Zea mays CL54662_1 mRNA sequence 101 3e-18
6gb|AY109566.1| Zea mays CL13678_1 mRNA sequence 72 3e-09
7gb|AY730335.1| Solanum tuberosum strain P6/210 clone BAC BA151m8... 58 4e-05
8ref|XM_450601.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
10dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11dbj|AK064216.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
12gb|BT013760.1| Lycopersicon esculentum clone 132643F, mRNA sequence 50 0.009
13ref|NM_110996.2| Arabidopsis thaliana ATP binding / kinase/ prot... 48 0.037
14gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC... 48 0.037
15gb|AC010676.6|ATAC010676 Arabidopsis thaliana chromosome III BAC... 48 0.037
16gb|AY057584.1| Arabidopsis thaliana AT3g01300/T22N4_7 mRNA, comp... 48 0.037
17gb|AY087034.1| Arabidopsis thaliana clone 30775 mRNA, complete s... 48 0.037
18emb|AL683800.9| Mouse DNA sequence from clone RP23-405B8 on chro... 42 2.3
19ref|NM_121512.3| Arabidopsis thaliana ATP binding / kinase/ prot... 40 9.0
20gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 9.0
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.0
22ref|XM_542068.2| PREDICTED: Canis familiaris similar to CG5645-P... 40 9.0
23emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in l... 40 9.0
24emb|AL512384.9| Human DNA sequence from clone RP11-317E16 on chr... 40 9.0
25emb|AL391146.1|ATF2G14 Arabidopsis thaliana DNA chromosome 5, BA... 40 9.0
26gb|AC091785.5| Genomic sequence for Mus musculus, clone RP23-349... 40 9.0
27gb|AC083843.5| Homo sapiens chromosome 8, clone RP11-157B5, comp... 40 9.0
28gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 9.0
29gb|AY062520.1| Arabidopsis thaliana serine/threonine specific pr... 40 9.0
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
31emb|BX831629.1|CNS09ZO6 Arabidopsis thaliana Full-length cDNA Co... 40 9.0
32emb|BX830789.1|CNS09YQZ Arabidopsis thaliana Full-length cDNA Co... 40 9.0
33gb|BT002577.1| Arabidopsis thaliana serine/threonine specific pr... 40 9.0
34emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chro... 40 9.0
35dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 9.0
36dbj|AP006129.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 9.0

>ref|NM_192557.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1485

 Score =  369 bits (186), Expect = 8e-99
 Identities = 350/405 (86%)
 Strand = Plus / Minus

                                                                        
Query: 256  gttgggccttggagactggcggtatggagaagcgtgcggaccgtaggagaggctcctcat 315
            |||||||||||| ||||| ||||| || || |||||||| || |||||||||||||||||
Sbjct: 1467 gttgggccttggggactgccggtacggggaggcgtgcgggccataggagaggctcctcat 1408

                                                                        
Query: 316  tggctgcacgccgttccgtgcaaaggtgctctgtgccttcatgctctggctaccatttgg 375
            |||||||   ||||| || || ||||||| ||||||||||||||| ||||| ||| ||||
Sbjct: 1407 tggctgctgcccgttgcgcgcgaaggtgccctgtgccttcatgctttggctgccaattgg 1348

                                                                        
Query: 376  gttgttgaggcttgcggcacgttcttgacgcatggactggaagaagtaggaggagctagc 435
            ||||  ||||||||||||||| || ||  ||||||| ||||||||||| |||||||| ||
Sbjct: 1347 gttgccgaggcttgcggcacgctcctgctgcatggattggaagaagtatgaggagctggc 1288

                                                                        
Query: 436  catgtctttcaggtttggaagaggcttcaggacttcaaccacttggctcatgagaggcct 495
            ||||||||| |||||  | || ||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1287 catgtctttgaggttcaggaggggcttgaggacttcgaccacttgactcatgagaggcct 1228

                                                                        
Query: 496  agccttaggatcccggctaaggcaagcatgtgccagctgagccgtcttctgagcgccttt 555
             ||||| ||||||||| ||||||| |||   ||||||||||| ||||||||||||||| |
Sbjct: 1227 ggccttgggatcccggttaaggcaggcacaggccagctgagctgtcttctgagcgcctct 1168

                                                                        
Query: 556  tatggagaaatttccctctagacggggatctacgagcctatagaatcgccttctttctcc 615
            ||||||||| || ||||| |||||||| ||||| |||||||||||||||| |||||||||
Sbjct: 1167 tatggagaagttcccctccagacgggggtctacaagcctatagaatcgccgtctttctcc 1108

                                                         
Query: 616  aagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660
            ||||||||| || |||||||||||||| ||||| ||  |||||||
Sbjct: 1107 aagataaggacgcgcccattcaaccaggttgtgttcaccgtttgg 1063



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  369 bits (186), Expect = 8e-99
 Identities = 350/405 (86%)
 Strand = Plus / Plus

                                                                            
Query: 256      gttgggccttggagactggcggtatggagaagcgtgcggaccgtaggagaggctcctcat 315
                |||||||||||| ||||| ||||| || || |||||||| || |||||||||||||||||
Sbjct: 22915408 gttgggccttggggactgccggtacggggaggcgtgcgggccataggagaggctcctcat 22915467

                                                                            
Query: 316      tggctgcacgccgttccgtgcaaaggtgctctgtgccttcatgctctggctaccatttgg 375
                |||||||   ||||| || || ||||||| ||||||||||||||| ||||| ||| ||||
Sbjct: 22915468 tggctgctgcccgttgcgcgcgaaggtgccctgtgccttcatgctttggctgccaattgg 22915527

                                                                            
Query: 376      gttgttgaggcttgcggcacgttcttgacgcatggactggaagaagtaggaggagctagc 435
                ||||  ||||||||||||||| || ||  ||||||| ||||||||||| |||||||| ||
Sbjct: 22915528 gttgccgaggcttgcggcacgctcctgctgcatggattggaagaagtatgaggagctggc 22915587

                                                                            
Query: 436      catgtctttcaggtttggaagaggcttcaggacttcaaccacttggctcatgagaggcct 495
                ||||||||| |||||  | || ||||| |||||||| |||||||| ||||||||||||||
Sbjct: 22915588 catgtctttgaggttcaggaggggcttgaggacttcgaccacttgactcatgagaggcct 22915647

                                                                            
Query: 496      agccttaggatcccggctaaggcaagcatgtgccagctgagccgtcttctgagcgccttt 555
                 ||||| ||||||||| ||||||| |||   ||||||||||| ||||||||||||||| |
Sbjct: 22915648 ggccttgggatcccggttaaggcaggcacaggccagctgagctgtcttctgagcgcctct 22915707

                                                                            
Query: 556      tatggagaaatttccctctagacggggatctacgagcctatagaatcgccttctttctcc 615
                ||||||||| || ||||| |||||||| ||||| |||||||||||||||| |||||||||
Sbjct: 22915708 tatggagaagttcccctccagacgggggtctacaagcctatagaatcgccgtctttctcc 22915767

                                                             
Query: 616      aagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660
                ||||||||| || |||||||||||||| ||||| ||  |||||||
Sbjct: 22915768 aagataaggacgcgcccattcaaccaggttgtgttcaccgtttgg 22915812



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>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0700A11
          Length = 136321

 Score =  369 bits (186), Expect = 8e-99
 Identities = 350/405 (86%)
 Strand = Plus / Plus

                                                                          
Query: 256    gttgggccttggagactggcggtatggagaagcgtgcggaccgtaggagaggctcctcat 315
              |||||||||||| ||||| ||||| || || |||||||| || |||||||||||||||||
Sbjct: 118965 gttgggccttggggactgccggtacggggaggcgtgcgggccataggagaggctcctcat 119024

                                                                          
Query: 316    tggctgcacgccgttccgtgcaaaggtgctctgtgccttcatgctctggctaccatttgg 375
              |||||||   ||||| || || ||||||| ||||||||||||||| ||||| ||| ||||
Sbjct: 119025 tggctgctgcccgttgcgcgcgaaggtgccctgtgccttcatgctttggctgccaattgg 119084

                                                                          
Query: 376    gttgttgaggcttgcggcacgttcttgacgcatggactggaagaagtaggaggagctagc 435
              ||||  ||||||||||||||| || ||  ||||||| ||||||||||| |||||||| ||
Sbjct: 119085 gttgccgaggcttgcggcacgctcctgctgcatggattggaagaagtatgaggagctggc 119144

                                                                          
Query: 436    catgtctttcaggtttggaagaggcttcaggacttcaaccacttggctcatgagaggcct 495
              ||||||||| |||||  | || ||||| |||||||| |||||||| ||||||||||||||
Sbjct: 119145 catgtctttgaggttcaggaggggcttgaggacttcgaccacttgactcatgagaggcct 119204

                                                                          
Query: 496    agccttaggatcccggctaaggcaagcatgtgccagctgagccgtcttctgagcgccttt 555
               ||||| ||||||||| ||||||| |||   ||||||||||| ||||||||||||||| |
Sbjct: 119205 ggccttgggatcccggttaaggcaggcacaggccagctgagctgtcttctgagcgcctct 119264

                                                                          
Query: 556    tatggagaaatttccctctagacggggatctacgagcctatagaatcgccttctttctcc 615
              ||||||||| || ||||| |||||||| ||||| |||||||||||||||| |||||||||
Sbjct: 119265 tatggagaagttcccctccagacgggggtctacaagcctatagaatcgccgtctttctcc 119324

                                                           
Query: 616    aagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660
              ||||||||| || |||||||||||||| ||||| ||  |||||||
Sbjct: 119325 aagataaggacgcgcccattcaaccaggttgtgttcaccgtttgg 119369



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>dbj|AK103037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E11, full
            insert sequence
          Length = 2501

 Score =  369 bits (186), Expect = 8e-99
 Identities = 350/405 (86%)
 Strand = Plus / Minus

                                                                        
Query: 256  gttgggccttggagactggcggtatggagaagcgtgcggaccgtaggagaggctcctcat 315
            |||||||||||| ||||| ||||| || || |||||||| || |||||||||||||||||
Sbjct: 1656 gttgggccttggggactgccggtacggggaggcgtgcgggccataggagaggctcctcat 1597

                                                                        
Query: 316  tggctgcacgccgttccgtgcaaaggtgctctgtgccttcatgctctggctaccatttgg 375
            |||||||   ||||| || || ||||||| ||||||||||||||| ||||| ||| ||||
Sbjct: 1596 tggctgctgcccgttgcgcgcgaaggtgccctgtgccttcatgctttggctgccaattgg 1537

                                                                        
Query: 376  gttgttgaggcttgcggcacgttcttgacgcatggactggaagaagtaggaggagctagc 435
            ||||  ||||||||||||||| || ||  ||||||| ||||||||||| |||||||| ||
Sbjct: 1536 gttgccgaggcttgcggcacgctcctgctgcatggattggaagaagtatgaggagctggc 1477

                                                                        
Query: 436  catgtctttcaggtttggaagaggcttcaggacttcaaccacttggctcatgagaggcct 495
            ||||||||| |||||  | || ||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1476 catgtctttgaggttcaggaggggcttgaggacttcgaccacttgactcatgagaggcct 1417

                                                                        
Query: 496  agccttaggatcccggctaaggcaagcatgtgccagctgagccgtcttctgagcgccttt 555
             ||||| ||||||||| ||||||| |||   ||||||||||| ||||||||||||||| |
Sbjct: 1416 ggccttgggatcccggttaaggcaggcacaggccagctgagctgtcttctgagcgcctct 1357

                                                                        
Query: 556  tatggagaaatttccctctagacggggatctacgagcctatagaatcgccttctttctcc 615
            ||||||||| || ||||| |||||||| ||||| |||||||||||||||| |||||||||
Sbjct: 1356 tatggagaagttcccctccagacgggggtctacaagcctatagaatcgccgtctttctcc 1297

                                                         
Query: 616  aagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660
            ||||||||| || |||||||||||||| ||||| ||  |||||||
Sbjct: 1296 aagataaggacgcgcccattcaaccaggttgtgttcaccgtttgg 1252



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>gb|AY111890.1| Zea mays CL54662_1 mRNA sequence
          Length = 603

 Score =  101 bits (51), Expect = 3e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                       
Query: 405 gcatggactggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttca 464
           |||||||||||||| ||||||| ||||| |||||||| || |||||  | ||||||||||
Sbjct: 388 gcatggactggaagtagtaggaagagctggccatgtccttgaggttctggagaggcttca 447

                                                                       
Query: 465 ggacttcaaccacttggctcatgagaggcctagccttaggatcccggctaaggcaagcat 524
           | || || ||||| |||||||| |||||||||||||| || || ||||| ||||| ||||
Sbjct: 448 gcacctccaccacctggctcatcagaggcctagccttggggtcacggctgaggcaggcat 507

                  
Query: 525 gtgccag 531
           | |||||
Sbjct: 508 gggccag 514



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                       
Query: 305 aggctcctcattggctgcacgccgttccgtgcaaaggtgctctgtgccttcatgctctgg 364
           ||||||||||| ||||||   |||||||| |||||||||||||| || |||||||| || 
Sbjct: 288 aggctcctcatgggctgctgcccgttccgcgcaaaggtgctctgcgctttcatgctttga 347

                          
Query: 365 ctaccatttgggttg 379
           || |||| |||||||
Sbjct: 348 ctgccatatgggttg 362



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>gb|AY109566.1| Zea mays CL13678_1 mRNA sequence
          Length = 635

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 90/108 (83%)
 Strand = Plus / Plus

                                                                       
Query: 412 ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471
           ||||||||||||||||| ||| |||||||| || |||||  | || ||||||||||| ||
Sbjct: 428 ctggaagaagtaggaggcgctcgccatgtccttgaggttctgcagcggcttcaggacctc 487

                                                           
Query: 472 aaccacttggctcatgagaggcctagccttaggatcccggctaaggca 519
            ||||| |||||||| || ||||  ||||| || |||||||| |||||
Sbjct: 488 caccacctggctcatcaggggccgcgccttggggtcccggctcaggca 535



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>gb|AY730335.1| Solanum tuberosum strain P6/210 clone BAC BA151m8, complete sequence
          Length = 41386

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 605   cttctttctccaagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660
             |||||||| ||||||| ||| |||||||||||||| || ||||||||| | |||||
Sbjct: 13549 cttctttcaccaagatgaggtcgtgcccattcaacaaggttgtgctccccatttgg 13604



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                         
Query: 420   agtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaaccactt 479
             ||||||| ||||| ||||||||||| || ||||| |  ||||||| | |||||||||| |
Sbjct: 13364 agtaggatgagctggccatgtctttaagatttggtaatggcttcaaggcttcaaccacat 13423

                                                      
Query: 480   ggctcatgagaggcctagccttaggatcccggctaaggcaa 520
               ||||| | ||| ||||| || ||||| ||||||||||||
Sbjct: 13424 cactcatcataggtctagctttgggatcacggctaaggcaa 13464



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>ref|XM_450601.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1399

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 417 agaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaacca 476
           ||||||| ||||||||||||||||| || |||||  | || ||||| || || || ||||
Sbjct: 982 agaagtacgaggagctagccatgtccttgaggttgagcagtggcttgagaacctctacca 923

                     
Query: 477 cttggctcat 486
           ||||||||||
Sbjct: 922 cttggctcat 913



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                            
Query: 417      agaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaacca 476
                ||||||| ||||||||||||||||| || |||||  | || ||||| || || || ||||
Sbjct: 11739191 agaagtacgaggagctagccatgtccttgaggttgagcagtggcttgagaacctctacca 11739132

                          
Query: 477      cttggctcat 486
                ||||||||||
Sbjct: 11739131 cttggctcat 11739122



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>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711F01
          Length = 193091

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                          
Query: 417    agaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaacca 476
              ||||||| ||||||||||||||||| || |||||  | || ||||| || || || ||||
Sbjct: 173825 agaagtacgaggagctagccatgtccttgaggttgagcagtggcttgagaacctctacca 173766

                        
Query: 477    cttggctcat 486
              ||||||||||
Sbjct: 173765 cttggctcat 173756



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>dbj|AK064216.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-F06, full
           insert sequence
          Length = 1399

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 417 agaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaacca 476
           ||||||| ||||||||||||||||| || |||||  | || ||||| || || || ||||
Sbjct: 982 agaagtacgaggagctagccatgtccttgaggttgagcagtggcttgagaacctctacca 923

                     
Query: 477 cttggctcat 486
           ||||||||||
Sbjct: 922 cttggctcat 913



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>gb|BT013760.1| Lycopersicon esculentum clone 132643F, mRNA sequence
          Length = 1725

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                        
Query: 420  agtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttcaaccactt 479
            ||||||| ||||| ||||||||||| || ||||| |  ||||||| | |||| |||||||
Sbjct: 1308 agtaggatgagctggccatgtctttaagatttggtaatggcttcaaggcttctaccactt 1249

                                                     
Query: 480  ggctcatgagaggcctagccttaggatcccggctaaggcaa 520
              ||||| | ||||||| | || ||||| || |||||||||
Sbjct: 1248 cactcatcataggcctaactttgggatcacgactaaggcaa 1208



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 605  cttctttctccaagataagggcgtgcccattcaaccagattgtgctccncgtttgg 660
            |||||||| ||||||| ||| |||||||||||||| || ||||| ||| | |||||
Sbjct: 1123 cttctttcaccaagatgaggccgtgcccattcaacaaggttgtgttccccatttgg 1068



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>ref|NM_110996.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT3G01300 mRNA, complete cds
          Length = 1942

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 412  ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471
            ||||||| |||| || | |||||||||||| || |||| ||| |||||||| || |||||
Sbjct: 1549 ctggaagtagtaagaagcgctagccatgtccttgaggtgtgggagaggcttaagtacttc 1490

                    
Query: 472  aaccactt 479
             |||||||
Sbjct: 1489 caccactt 1482



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>gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC T4P13 genomic sequence,
            complete sequence
          Length = 93735

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 412  ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471
            ||||||| |||| || | |||||||||||| || |||| ||| |||||||| || |||||
Sbjct: 6174 ctggaagtagtaagaagcgctagccatgtccttgaggtgtgggagaggcttaagtacttc 6115

                    
Query: 472  aaccactt 479
             |||||||
Sbjct: 6114 caccactt 6107



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>gb|AC010676.6|ATAC010676 Arabidopsis thaliana chromosome III BAC T22N4 genomic sequence,
             complete sequence
          Length = 58448

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 412   ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471
             ||||||| |||| || | |||||||||||| || |||| ||| |||||||| || |||||
Sbjct: 47820 ctggaagtagtaagaagcgctagccatgtccttgaggtgtgggagaggcttaagtacttc 47761

                     
Query: 472   aaccactt 479
              |||||||
Sbjct: 47760 caccactt 47753



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>gb|AY057584.1| Arabidopsis thaliana AT3g01300/T22N4_7 mRNA, complete cds
          Length = 1841

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 412  ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471
            ||||||| |||| || | |||||||||||| || |||| ||| |||||||| || |||||
Sbjct: 1448 ctggaagtagtaagaagcgctagccatgtccttgaggtgtgggagaggcttaagtacttc 1389

                    
Query: 472  aaccactt 479
             |||||||
Sbjct: 1388 caccactt 1381



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>gb|AY087034.1| Arabidopsis thaliana clone 30775 mRNA, complete sequence
          Length = 1923

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 412  ctggaagaagtaggaggagctagccatgtctttcaggtttggaagaggcttcaggacttc 471
            ||||||| |||| || | |||||||||||| || |||| ||| |||||||| || |||||
Sbjct: 1549 ctggaagtagtaagaagcgctagccatgtccttgaggtgtgggagaggcttaagtacttc 1490

                    
Query: 472  aaccactt 479
             |||||||
Sbjct: 1489 caccactt 1482



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>emb|AL683800.9| Mouse DNA sequence from clone RP23-405B8 on chromosome X, complete
              sequence
          Length = 198175

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 606    ttctttctccaagataagggc 626
              |||||||||||||||||||||
Sbjct: 124836 ttctttctccaagataagggc 124856



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>ref|NM_121512.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT5G15080 mRNA, complete cds
          Length = 2001

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 412  ctggaagaagtaggaggagctagccatgtctttcag 447
            ||||||| |||| || ||||| ||||||||||||||
Sbjct: 1603 ctggaagtagtaagaagagcttgccatgtctttcag 1568



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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 536    gccgtcttctgagcgccttt 555
              ||||||||||||||||||||
Sbjct: 598064 gccgtcttctgagcgccttt 598083



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 121      tggcatctgctgatctgcct 140
                ||||||||||||||||||||
Sbjct: 13755753 tggcatctgctgatctgcct 13755734



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>ref|XM_542068.2| PREDICTED: Canis familiaris similar to CG5645-PA (LOC484952), mRNA
          Length = 2127

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 603 gccttctttctccaagataa 622
           ||||||||||||||||||||
Sbjct: 393 gccttctttctccaagataa 374



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>emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in linkage group 3,
            complete sequence
          Length = 168285

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 630  cccattcaaccagattgtgc 649
            ||||||||||||||||||||
Sbjct: 4637 cccattcaaccagattgtgc 4656



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>emb|AL512384.9| Human DNA sequence from clone RP11-317E16 on chromosome 6 Contains the
             3' end of the gene for sectretagogin (SECRET), the genes
             for novel H2A and H2B histone family members, H2A and H2B
             histone family pseudogenes, complete sequence
          Length = 49963

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 204   cccaacctttgaaccagtcatggt 227
             |||||||||||||||| |||||||
Sbjct: 43051 cccaacctttgaaccaatcatggt 43028



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>emb|AL391146.1|ATF2G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F2G14 (ESSA project)
          Length = 85992

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 412   ctggaagaagtaggaggagctagccatgtctttcag 447
             ||||||| |||| || ||||| ||||||||||||||
Sbjct: 73139 ctggaagtagtaagaagagcttgccatgtctttcag 73104



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>gb|AC091785.5| Genomic sequence for Mus musculus, clone RP23-349P1, complete sequence
          Length = 178271

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   atggcatctgctgatctgcc 139
             ||||||||||||||||||||
Sbjct: 38172 atggcatctgctgatctgcc 38191



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>gb|AC083843.5| Homo sapiens chromosome 8, clone RP11-157B5, complete sequence
          Length = 159032

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 485   atgagaggcctagccttagg 504
             ||||||||||||||||||||
Sbjct: 85276 atgagaggcctagccttagg 85295



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>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0048D11, from chromosome 3, complete sequence
          Length = 158911

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   tggcatctgctgatctgcct 140
             ||||||||||||||||||||
Sbjct: 32281 tggcatctgctgatctgcct 32262



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>gb|AY062520.1| Arabidopsis thaliana serine/threonine specific protein kinase-like
            (At5g15080; F2G14_200) mRNA, complete cds
          Length = 1950

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 412  ctggaagaagtaggaggagctagccatgtctttcag 447
            ||||||| |||| || ||||| ||||||||||||||
Sbjct: 1603 ctggaagtagtaagaagagcttgccatgtctttcag 1568



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 121      tggcatctgctgatctgcct 140
                ||||||||||||||||||||
Sbjct: 13750728 tggcatctgctgatctgcct 13750709



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>emb|BX831629.1|CNS09ZO6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH1ZD07 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1806

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 412  ctggaagaagtaggaggagctagccatgtctttcag 447
            ||||||| |||| || ||||| ||||||||||||||
Sbjct: 1515 ctggaagtagtaagaagagcttgccatgtctttcag 1480



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>emb|BX830789.1|CNS09YQZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS23ZC08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1934

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 412  ctggaagaagtaggaggagctagccatgtctttcag 447
            ||||||| |||| || ||||| ||||||||||||||
Sbjct: 1547 ctggaagtagtaagaagagcttgccatgtctttcag 1512



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>gb|BT002577.1| Arabidopsis thaliana serine/threonine specific protein kinase-like
            (At5g15080) mRNA, complete cds
          Length = 1529

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 412  ctggaagaagtaggaggagctagccatgtctttcag 447
            ||||||| |||| || ||||| ||||||||||||||
Sbjct: 1317 ctggaagtagtaagaagagcttgccatgtctttcag 1282



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>emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chromosome 13, complete
             sequence
          Length = 206864

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 417   agaagtaggaggagctagccatgt 440
             |||||| |||||||||||||||||
Sbjct: 42705 agaagtgggaggagctagccatgt 42728



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>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391,
             complete sequence
          Length = 98505

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 472   aaccacttggctcatgagaggcctagccttaggatcccggctaaggca 519
             ||||||||  ||||| | ||||||||| || ||||| |||||||||||
Sbjct: 63254 aaccacttcactcatcaaaggcctagcttttggatcgcggctaaggca 63301



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>dbj|AP006129.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT27K02, TM0225,
             complete sequence
          Length = 70805

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 472   aaccacttggctcatgagaggcctagccttaggatcccggctaaggca 519
             ||||||||  ||||| | ||||||||| || ||||| |||||||||||
Sbjct: 20171 aaccacttcactcatcaaaggcctagcttttggatcgcggctaaggca 20218


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,804,378
Number of Sequences: 3902068
Number of extensions: 4804378
Number of successful extensions: 85305
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85166
Number of HSP's gapped (non-prelim): 139
length of query: 660
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 637
effective length of database: 17,143,297,704
effective search space: 10920280637448
effective search space used: 10920280637448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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