>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)|
          Length = 1513

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 25/89 (28%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
 Frame = +3

Query: 180  SYTGRQDRHPTETSCATXXCTPG--SATTRPSXGLASRXKGATAPSSERSGCTTRPGXTM 353
            S T     H T T   T   T    S TT P+    S     T+P+   +  TT P  + 
Sbjct: 1421 SATSPTTSHITSTVSPTTSPTTSTTSPTTSPTTSTTSPTTSTTSPTPSPTTSTTSPTPSP 1480

Query: 354  PCRTTGLAPGRRXRSAGPTAKGILPPASS 440
               TT   P     +  PT   I  P +S
Sbjct: 1481 TTSTTSPTPSPTTSTTSPTTSPITSPTTS 1509

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 3/142 (2%)
 Frame = +3

Query: 21   TPNXNXSHMYRSCIYIHTHTHTIPNSTDSLALYHHQRTHPLQGXXXXXXXXXHSYTG-RQ 197
            TP    S +  S     THT  +PN+T +     H R+ P             + +G   
Sbjct: 3395 TPAATSSTVTPSSALGTTHTPPVPNTTATT----HGRSLPPSSPHTVPTAWTSATSGILG 3450

Query: 198  DRHPTETSCATXXCTPGSAT--TRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTG 371
              H TE S  T   TP + T  T+PS    S    +  PSS  +     PG T P  T G
Sbjct: 3451 TTHITEPSTGTSH-TPAATTGTTQPSTPALS----SPHPSSRTTESPPSPGTTTPGHTRG 3505

Query: 372  LAPGRRXRSAGPTAKGILPPAS 437
             +      +   T    L P+S
Sbjct: 3506 TSRTTATATPSKTRTSTLLPSS 3527



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 35/139 (25%), Positives = 48/139 (34%)
 Frame = +3

Query: 21   TPNXNXSHMYRSCIYIHTHTHTIPNSTDSLALYHHQRTHPLQGXXXXXXXXXHSYTGRQD 200
            TP    S +  S     THT  +PN+T   A  H +   P             +      
Sbjct: 2697 TPAATSSTVTPSSALGTTHTPPVPNTT---ATTHGRSLSPSSPHTVRTAWTSATSGTLGT 2753

Query: 201  RHPTETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAP 380
             H TE S  T   TP  A T  +   ++    +  PSS  +     PG T P  TT  + 
Sbjct: 2754 THITEPSTGTSH-TP--AATTGTTQHSTPALSSPHPSSRTTESPPSPGTTTPGHTTATSR 2810

Query: 381  GRRXRSAGPTAKGILPPAS 437
                 +   T    L P+S
Sbjct: 2811 TTATATPSKTRTSTLLPSS 2829



 Score = 31.2 bits (69), Expect = 1.5
 Identities = 35/130 (26%), Positives = 47/130 (36%)
 Frame = +3

Query: 21   TPNXNXSHMYRSCIYIHTHTHTIPNSTDSLALYHHQRTHPLQGXXXXXXXXXHSYTGRQD 200
            TP    S +  S     THT  +PN+T   A  H +   P             +      
Sbjct: 3924 TPAATSSTVTPSSALGTTHTPPVPNTT---ATTHGRSLSPSSPHTVRTAWTSATSGTLGT 3980

Query: 201  RHPTETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAP 380
             H TE S  T   TP  A T  +   ++    +  PSS  +     PG T P  TT  A 
Sbjct: 3981 THITEPSTGTSH-TP--AATTGTTTTSTPALSSPHPSSRTTESPPSPGTTTPGHTT--AT 4035

Query: 381  GRRXRSAGPT 410
             R   +A P+
Sbjct: 4036 SRTTATATPS 4045



 Score = 29.3 bits (64), Expect = 5.7
 Identities = 35/130 (26%), Positives = 47/130 (36%)
 Frame = +3

Query: 21   TPNXNXSHMYRSCIYIHTHTHTIPNSTDSLALYHHQRTHPLQGXXXXXXXXXHSYTGRQD 200
            TP    S +  S     THT  +PN+T   A  H +   P             +      
Sbjct: 2168 TPAATSSTVTPSSALGTTHTPPVPNTT---ATTHGRSLSPSSPHTVCTAWTSATSGILGT 2224

Query: 201  RHPTETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAP 380
             H TE S  T   TP  A T  +   ++    +  PSS  +     PG T P  TT  A 
Sbjct: 2225 THITEPSTGTSH-TP--AATTGTTQHSTPALSSPHPSSRTTESPPSPGTTTPGHTT--AT 2279

Query: 381  GRRXRSAGPT 410
             R   +A P+
Sbjct: 2280 SRTTATATPS 2289

>TMPS9_HUMAN (Q7Z410) Transmembrane protease, serine 9 (EC 3.4.21.-)|
           (Polyserase-1) (Polyserase-I) (Polyserine protease 1)
           [Contains: Serase-1; Serase-2; Serase-3]
          Length = 1059

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 11/70 (15%)
 Frame = +3

Query: 243 PGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXT----MPCRTT-------GLAPGRR 389
           PG+  +RP+ G ASR  G  A S+  +  TT  G T     P  TT       GLAP   
Sbjct: 765 PGATPSRPTPGAASRVTGQPANSTLSAVSTTARGQTPFPDAPEATTHTQLPDCGLAPAAL 824

Query: 390 XRSAGPTAKG 419
            R  G +A G
Sbjct: 825 TRIVGGSAAG 834

>MDC1_RAT (Q5U2M8) Mediator of DNA damage checkpoint protein 1|
          Length = 1279

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
 Frame = +3

Query: 216  TSCATXXCTPGSATTRPSXGLASRXKG-------ATAPSSERSGCTTRPGXTMPCRTTGL 374
            T+C T        T+RP+ G A+R           T P  + S  T +PG  +P  T+ +
Sbjct: 861  TTCPTNQPAASRPTSRPTRGRANRSSTRTPELIVPTGPELQPSTSTEQPG--IPNLTSQV 918

Query: 375  APGRRXRSAGPTAKGILPPASSGPR*QP 458
              GR    A  T+  +  P  +GP  QP
Sbjct: 919  TEGR----AHSTSVNMPEPVLTGPEAQP 942

>HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1198

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
 Frame = +3

Query: 180  SYTGRQDRHPTETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPC 359
            S  G+  + P E S       P +  T P     S   GA+  +S  +  T R G + P 
Sbjct: 969  SSPGQLGQPPGELSPGLAAGPPSTPETPPRPERPSFMAGASGGASPVA-FTPRGGLSPPG 1027

Query: 360  RTTGLAPGRRXRSAGPTAKG-----ILPPASSGP 446
             + G  P R   SA P A G     +LPPASS P
Sbjct: 1028 HSPG--PPRTFPSAPPRASGSHGSLLLPPASSPP 1059

>M3K12_RAT (Q63796) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 888

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
 Frame = +3

Query: 243 PGSATTRPSXGLASRXKGATAPSSERSGCTTRPG--XTMPCRTTGLAPGRRXRSAGPTAK 416
           PG     PS G + R K     +S +  C   PG    +P    G          GPTA 
Sbjct: 561 PGCPKAPPSPGRSRRGKTRHRKASAKGSCGDLPGLRAALPPHEPGGLGSPGGLGVGPTAW 620

Query: 417 GILPPASSGPR*QPWDLLLRE 479
              PPA  G      DLLLR+
Sbjct: 621 DASPPALRGLH---HDLLLRK 638

>NID1_HUMAN (P14543) Nidogen-1 precursor (Entactin)|
          Length = 1247

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = +3

Query: 315  ERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAKGILPPAS 437
            E  G  TRPG T PC +T +AP      A PTA   LPP +
Sbjct: 905  EVEGTRTRPGMTPPCLST-VAPPIHQGPAVPTAVIPLPPGT 944

>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +3

Query: 249 SATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAKGILP 428
           +A  +P  G  ++     APS+ +SG   +P        +G  PG   + A P AK    
Sbjct: 122 AAAAKP--GAPAKPAAPAAPSAAKSGSAPKPAAAAKPAFSGPTPGDAAKKAEPAAK---- 175

Query: 429 PASSGPR 449
           P +  PR
Sbjct: 176 PGAEAPR 182



 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = +3

Query: 258 TRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAG 404
           +RP  G A   +GA  PS ER G   RP   M   T G  P +     G
Sbjct: 287 SRPQGGSAQGAQGA--PSQERQGGGRRPSPAMMPPTPGQMPAKAPGKGG 333

>NU1M_PECMA (Q96186) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 354

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = -1

Query: 145 WSGWVRW-WWYKAKESVELG-IVCV 77
           W GW +W WW  + +S+ +G +VCV
Sbjct: 16  WPGWYKWYWWLTSTKSLSIGRLVCV 40

>DEL1_CAEEL (Q19038) Degenerin del-1|
          Length = 664

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = -1

Query: 136 WVRWWWYKAKESVELGIVCVCVCMY----IHDRY 47
           WVR+ W      V + +VC+C+CMY    + D+Y
Sbjct: 65  WVRFLW------VVVSLVCICLCMYSFSHVKDKY 92

>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = +3

Query: 210 TETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTG 371
           T T+  T   T  +ATT  +   A+    AT  ++  +  TT    T    TTG
Sbjct: 277 TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTG 330



 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/68 (25%), Positives = 28/68 (41%)
 Frame = +3

Query: 210 TETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGRR 389
           T T+  T   T  +ATT  +   A+    AT  ++  +  TT    T    T+G      
Sbjct: 282 TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTTG 341

Query: 390 XRSAGPTA 413
             ++ P+A
Sbjct: 342 ASTSTPSA 349

>MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domains 9 precursor|
           (EGF-like domain-containing protein 5) (Multiple
           EGF-like domain protein 5)
          Length = 600

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 26/84 (30%), Positives = 29/84 (34%)
 Frame = +3

Query: 207 PTETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGR 386
           PT    A    T   A TRP+    S   G   P+      TT P  T P   T   P  
Sbjct: 122 PTTPPAAERTSTTSQAPTRPAPTTLSTTTG---PAPTTPVATTVPAPTTPRTPTPDLPSS 178

Query: 387 RXRSAGPTAKGILPPASSGPR*QP 458
              S  PT     PPA+  P   P
Sbjct: 179 SNSSVLPT-----PPATEAPSSPP 197

>MDC1_PANTR (Q7YR40) Mediator of DNA damage checkpoint protein 1|
          Length = 2171

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 23/76 (30%), Positives = 35/76 (46%)
 Frame = +3

Query: 207  PTETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGR 386
            P  TS AT   T  S+   P  G+       TAP  +    T +P  + P  T+ +  GR
Sbjct: 1139 PKPTSQATRSRTNRSSVKTPEQGVP------TAPELQPCTSTDQPVTSEP--TSQVTRGR 1190

Query: 387  RXRSAGPTAKGILPPA 434
            + RS+  T + ++P A
Sbjct: 1191 KSRSSVKTPETVVPTA 1206

>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 859

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
 Frame = +3

Query: 243 PGSATTRPSXGLASRXKGATAPSSERSGCTTRPG--XTMPCRTTGLAPGRRXRSAGPTAK 416
           PG     PS G + R K     +S +  C   PG    +P    G          GP+A 
Sbjct: 528 PGCPKAPPSPGRSRRGKTRHRKASAKGSCGDLPGLRTAVPPHEPGGPGSPGGLGGGPSAW 587

Query: 417 GILPPASSGPR*QPWDLLLRE 479
              PPA  G      DLLLR+
Sbjct: 588 EACPPALRGLH---HDLLLRK 605

>M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 888

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
 Frame = +3

Query: 243 PGSATTRPSXGLASRXKGATAPSSERSGCTTRPG--XTMPCRTTGLAPGRRXRSAGPTAK 416
           PG     PS G + R K     +S +  C   PG    +P    G          GP+A 
Sbjct: 561 PGCPKGPPSPGRSRRGKTRHRKASAKGSCGDLPGLRAALPPHEPGGLGSPGGLGVGPSAW 620

Query: 417 GILPPASSGPR*QPWDLLLRE 479
              PPA  G      DLLLR+
Sbjct: 621 DACPPALRGLH---HDLLLRK 638

>LSD1_MOUSE (Q6ZQ88) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine|
           oxidase flavin-containing domain protein 2) (AOF2
           protein) (BRAF35-HDAC complex protein BHC110)
          Length = 853

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
 Frame = +3

Query: 246 GSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTA-KGI 422
           GS    P  GL      AT  + ER+     P    P       PG     AGPTA  G 
Sbjct: 35  GSEVAAPPAGLTGPTDMATGAAGERTPRKKEPPRASPPGGLAEPPGSAGPQAGPTAGPGS 94

Query: 423 LPPASSG 443
             P  +G
Sbjct: 95  ATPMETG 101

>SANT_PLAFV (P09593) S-antigen protein precursor|
          Length = 375

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 27/70 (38%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +3

Query: 243 PGSATTRPSXGLASRX-KGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAKG 419
           PGS   + + G  S   KG   P SE    T  PG   P  T G  PG    S GP  KG
Sbjct: 250 PGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGGPGSESPKGTGG--PG----SEGP--KG 301

Query: 420 ILPPASSGPR 449
              P S GP+
Sbjct: 302 TGGPGSEGPK 311



 Score = 29.3 bits (64), Expect = 5.7
 Identities = 30/86 (34%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
 Frame = +3

Query: 195 QDRHPTETSCATXXCTPGSATTRPSXGLASRX-KGATAPSSERSGCTTRPGXTMPCRTTG 371
           QD    E         PGS   + + G  S   KG   P SE    T  PG   P  T G
Sbjct: 91  QDGSDQEVKVQKEQGGPGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGG 150

Query: 372 LAPGRRXRSAGPTAKGILPPASSGPR 449
             PG    S GP  KG   P S GP+
Sbjct: 151 --PG----SEGP--KGTGGPGSEGPK 168



 Score = 28.9 bits (63), Expect = 7.5
 Identities = 27/70 (38%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +3

Query: 243 PGSATTRPSXGLASRX-KGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAKG 419
           PGS   + + G  S   KG   P SE    T  PG   P  T G  PG    S GP  KG
Sbjct: 217 PGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGG--PG----SEGP--KG 268

Query: 420 ILPPASSGPR 449
              P S GP+
Sbjct: 269 TGGPGSEGPK 278



 Score = 28.9 bits (63), Expect = 7.5
 Identities = 27/70 (38%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +3

Query: 243 PGSATTRPSXGLASRX-KGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAKG 419
           PGS   + + G  S   KG   P SE    T  PG   P  T G  PG    S GP  KG
Sbjct: 195 PGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGG--PG----SEGP--KG 246

Query: 420 ILPPASSGPR 449
              P S GP+
Sbjct: 247 TGGPGSEGPK 256



 Score = 28.9 bits (63), Expect = 7.5
 Identities = 27/70 (38%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +3

Query: 243 PGSATTRPSXGLASRX-KGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAKG 419
           PGS   + + G  S   KG   P SE    T  PG   P  T G  PG    S GP  KG
Sbjct: 173 PGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGG--PG----SEGP--KG 224

Query: 420 ILPPASSGPR 449
              P S GP+
Sbjct: 225 TGGPGSEGPK 234



 Score = 28.9 bits (63), Expect = 7.5
 Identities = 27/70 (38%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +3

Query: 243 PGSATTRPSXGLASRX-KGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAKG 419
           PGS   + + G  S   KG   P SE    T  PG   P  T G  PG    S GP  KG
Sbjct: 151 PGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGG--PG----SEGP--KG 202

Query: 420 ILPPASSGPR 449
              P S GP+
Sbjct: 203 TGGPGSEGPK 212



 Score = 28.9 bits (63), Expect = 7.5
 Identities = 27/70 (38%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +3

Query: 243 PGSATTRPSXGLASRX-KGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAKG 419
           PGS   + + G  S   KG   P SE    T  PG   P  T G  PG    S GP  KG
Sbjct: 129 PGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGGPGSEGPKGTGG--PG----SEGP--KG 180

Query: 420 ILPPASSGPR 449
              P S GP+
Sbjct: 181 TGGPGSEGPK 190

>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 23/73 (31%), Positives = 28/73 (38%)
 Frame = +3

Query: 192 RQDRHPTETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTG 371
           R+DR    ++       PG A TRP      R   A     +    T RPG   P R  G
Sbjct: 322 RRDRSDAGSAGRDSNNRPG-APTRPGMPTGMRKPVAPGELMQLQKPTGRPGTPPPRRPDG 380

Query: 372 LAPGRRXRSAGPT 410
            + G R  S G T
Sbjct: 381 TSVGTRGGSEGAT 393

>FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolase FAF (EC|
           3.1.2.15) (Ubiquitin thioesterase FAF) (Ubiquitin
           specific-processing protease FAF) (Deubiquitinating
           enzyme FAF) (Protein fat facets)
          Length = 2778

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +3

Query: 294 GATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAKGILPPASSG 443
           G+TAPSS  S  +T    T P ++ G   G      G  A   LP   SG
Sbjct: 14  GSTAPSSSSSTTSTTTTTTSPAQSAGSGSG-IGTGTGTVANSSLPGGGSG 62

>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4 (Brain cyclic nucleotide gated
            channel 3) (BCNG-3)
          Length = 1186

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
 Frame = +3

Query: 180  SYTGRQDRHPTETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPC 359
            S  G+  + P E S         +  T P     S   GA+  +S  +  T R G + P 
Sbjct: 956  SSPGQLGQPPGELSLGLAAGPSSTPETPPRPERPSFMAGASGGASPVA-FTPRGGLSPPG 1014

Query: 360  RTTGLAPGRRXRSAGPTAKG-----ILPPASSGP 446
             + G  P R   SA P A G     +LPPASS P
Sbjct: 1015 HSPG--PPRTFPSAPPRASGSHGSLLLPPASSPP 1046

>HR2A_TRIFL (P14530) Hemorrhagic metalloproteinase HR2a precursor (EC|
           3.4.24.53) (Trimerelysin II) [Contains: Disintegrin
           flavostatin (RGD-containing peptide) (Platelet
           aggregation activation inhibitor)]
          Length = 478

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = -1

Query: 382 PGASPVVRQGIVXPGRVVHPER---SDEGAVAPFXRDASPXDGRVVAEPGV 239
           PG+S ++  G V    VV+P++     +GAV P   DA   + +V  EP V
Sbjct: 17  PGSSIILESGNVDDYEVVYPQKLTALPKGAVQPKYEDAMQYEFKVNGEPVV 67

>A60DA_DROME (P91927) Calcium-binding mitochondrial protein Anon-60Da|
          Length = 1013

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 20/75 (26%), Positives = 30/75 (40%)
 Frame = +3

Query: 216  TSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXR 395
            T  +T     G +   PS G +    G+T  S+ R     +    +P    GL P  +  
Sbjct: 928  TKASTGSGPAGLSGGGPSSGSSGIATGSTTESALREAAERQMEKILPSTDIGLPPTIQTP 987

Query: 396  SAGPTAKGILPPASS 440
            S  PT+K     AS+
Sbjct: 988  SQPPTSKKATATAST 1002

>AREA_GIBFU (P78688) Nitrogen regulatory protein areA|
          Length = 971

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/67 (28%), Positives = 28/67 (41%)
 Frame = +3

Query: 246 GSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAKGIL 425
           GS T  P  G ++R K   +  + R   T          +T  A   +  S+ PT +   
Sbjct: 744 GSGTNVPVGGSSTRSKKTASTLNSRKNSTLS-------MSTATANSTKPNSSNPTPRVTT 796

Query: 426 PPASSGP 446
           PPA+S P
Sbjct: 797 PPATSQP 803

>GUX2_TRIRE (P07987) Exoglucanase 2 precursor (EC 3.2.1.91) (Exoglucanase II)|
           (Exocellobiohydrolase II) (CBHII)
           (1,4-beta-cellobiohydrolase)
          Length = 471

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = +3

Query: 237 CTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAK 416
           C PG+A++  S   AS     +  +S  S  T  PG T   R   +  G    S  P   
Sbjct: 61  CLPGAASSSSSTRAASTTSRVSPTTSRSSSATPPPGST-TTRVPPVGSGTATYSGNPFV- 118

Query: 417 GILPPASS 440
           G+ P A++
Sbjct: 119 GVTPWANA 126

>CRUM2_MOUSE (Q80YA8) Crumbs homolog 2 (Crumbs-like protein 2) (Fragment)|
          Length = 1248

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 210 TETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRP 341
           T + CA+  C PG+       G      G T   SE  GC T+P
Sbjct: 8   TPSVCASDPCAPGTKCQATESG------GYTCEPSELGGCATQP 45

>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1203

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
 Frame = +3

Query: 240  TPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGPTAKG 419
            TP      PS  L +   G  +P     G T R G + P  + G  P R   SA P A G
Sbjct: 996  TPPRQPEPPS--LVAGASGGASPV----GFTPRGGLSPPGHSPG--PPRTFPSAPPRASG 1047

Query: 420  -----ILPPASSGP 446
                 +LPPASS P
Sbjct: 1048 SHGSLLLPPASSPP 1061

>FMT_LEIXX (Q6AF77) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 302

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
 Frame = +3

Query: 228 TXXCTP--GSATTRPSXGLASRXKGATAPSSER----SGCTTRPGXTMPCRTTGLAPGRR 389
           T   TP  G     P  G+A      T P+ E      G T  PG         L  G R
Sbjct: 185 TAVATPQSGEPVAAPKLGIADAKLDLTRPADEVYARFRGVTPEPGAW------ALLDGER 238

Query: 390 XR--SAGPTAKGILPPAS 437
            +  +  PTA G+LPP +
Sbjct: 239 FKIHAVRPTAAGVLPPGA 256

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 26/84 (30%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
 Frame = +3

Query: 213 ETSCATXXC--TPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGR 386
           E S A   C   P S + R       +   A APS   S    RP      R    A GR
Sbjct: 2   ERSNAATKCGEEPRSGSRRLPKAEGDKSGSAGAPSKNSSRLGGRPCMCTAGRRPNRASGR 61

Query: 387 RXRSAGPTAKGILPPASSGPR*QP 458
           R RS  P      PP    P+ +P
Sbjct: 62  RRRSCSPAP--TWPPLCCYPQSRP 83

>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1006

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
 Frame = +3

Query: 237 CTPG---SATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGLAPGRRXRSAGP 407
           CTP    +AT   S  LA    G    S+         G   P  TTG           P
Sbjct: 90  CTPEGQKTATAHRSSSLAPTSVGQLVMSASA-------GPKPPPATTGSV-------LAP 135

Query: 408 TAKGILPPASSGPR*QP 458
           T+ G++ PAS+GPR  P
Sbjct: 136 TSLGLVMPASAGPRSPP 152

>CRTI_SYNY4 (P21134) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene|
           desaturase)
          Length = 532

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 20/82 (24%), Positives = 31/82 (37%)
 Frame = -1

Query: 460 QGCHLGPDEAGGRMPFAVGPAERXRLPGASPVVRQGIVXPGRVVHPERSDEGAVAPFXRD 281
           +G  LG      R+   V PAE   + G +   RQG +    +V      E       + 
Sbjct: 239 RGEGLGEGRDAPRVQVVVAPAEGRLVAGVTQTARQGQLVGQVIVDLAEHGEAVARLLVQV 298

Query: 280 ASPXDGRVVAEPGVQXXVAQDV 215
                GR+    GV+  + +DV
Sbjct: 299 VVLGPGRIAGPVGVEVDIVRDV 320

>AREA_EMENI (P17429) Nitrogen regulatory protein areA|
          Length = 876

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
 Frame = +3

Query: 207 PTETSCATXXCTPGSATTRPSXGLASRXKG----ATAPSSERSGCTTRPGXTMPCRTTGL 374
           PT  + +       S +     G + R  G    A AP    S  TT PG    C    +
Sbjct: 750 PTAPTSSRAQSNTTSESPPAMPGSSGRGSGVVPIAAAPPKSSSAATTSPGTNNGCGAVQV 809

Query: 375 APGRRXR 395
           AP R+ R
Sbjct: 810 APKRQRR 816

>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 21/84 (25%), Positives = 28/84 (33%)
 Frame = +3

Query: 195 QDRHPTETSCATXXCTPGSATTRPSXGLASRXKGATAPSSERSGCTTRPGXTMPCRTTGL 374
           Q + P   +        G  T   S   A R   ++A S + +         +P RTT  
Sbjct: 206 QPKSPAPLAARCSASRAGCPTAAGSLLPAPRPPASSASSPQAAAPAAPSATRLPRRTTPS 265

Query: 375 APGRRXRSAGPTAKGILPPASSGP 446
           AP    R A P      PP    P
Sbjct: 266 APRPSSRPARPPIPAARPPPRRTP 289

>Y115_ADE02 (P03290) Hypothetical protein E-115|
          Length = 115

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 23/92 (25%)
 Frame = +3

Query: 240 TPGSATTRPSXGLASR----------------XKGATAPSS---ERSGC----TTRPGXT 350
           +PGS   RPS G A+R                 K  TAP +    R+ C    T R G T
Sbjct: 14  SPGSWNARPSAGPAARMPTPRNRYFSRPSSTPLKVCTAPRAAPPPRASCAPRATPRRGWT 73

Query: 351 MPCRTTGLAPGRRXRSAGPTAKGILPPASSGP 446
           M   +    P RR ++   +A     PASS P
Sbjct: 74  MTPWSNATWPTRRAKTGSASAPA--GPASSAP 103


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,563,310
Number of Sequences: 219361
Number of extensions: 1084257
Number of successful extensions: 3726
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3700
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)