ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25c14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185755.2| Oryza sativa (japonica cultivar-group), mRNA 434 e-118
2dbj|AK104331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
3dbj|AK067714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
4gb|AY108648.1| Zea mays PCO090155 mRNA sequence 325 1e-85
5gb|BT019196.1| Zea mays clone Contig868.F mRNA sequence 317 3e-83
6gb|BT018553.1| Zea mays clone EL01N0439D12.d mRNA sequence 313 4e-82
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 297 2e-77
8dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 297 2e-77
9emb|AJ438592.1|MCR438592 Mesembryanthemum crystallinum mRNA for ... 90 1e-14
10emb|AJ698924.1| Populus deltoides x Populus maximowiczii partial... 84 7e-13
11gb|DQ493959.1| Musa acuminata vacuolar ATPase subunit H mRNA, pa... 80 1e-11
12gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete s... 78 4e-11
13gb|AY225129.1| Suaeda maritima subsp. salsa putative vacuolar AT... 66 2e-07
14ref|NM_114072.2| Arabidopsis thaliana ATP binding / hydrogen-tra... 54 6e-04
15gb|AY091685.1| Arabidopsis thaliana AT3g42050/F4M19_10 mRNA, com... 54 6e-04
16gb|AY037176.1| Arabidopsis thaliana AT3g42050/F4M19_10 mRNA, com... 54 6e-04
17emb|BX823850.1|CNS0A6JD Arabidopsis thaliana Full-length cDNA Co... 54 6e-04
18emb|AL356013.1|ATF4M19 Arabidopsis thaliana DNA chromosome 3, BA... 50 0.009
19emb|BX823221.1|CNS0A6OK Arabidopsis thaliana Full-length cDNA Co... 50 0.009
20gb|AY544986.1| Litopenaeus vannamei Kazal-type proteinase inhibi... 44 0.56
21gb|BC084672.1| Xenopus laevis MGC82842 protein, mRNA (cDNA clone... 42 2.2
22emb|X95549.1|XLFIMB1GN X.laevis FIM-B.1 gene 42 2.2
23emb|BX119969.4| Mouse DNA sequence from clone RP23-58N9 on chrom... 42 2.2
24gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome... 42 2.2
25gb|AC136426.2| Homo sapiens chromosome 5 clone CTD-2008N14, comp... 42 2.2
26emb|AL954325.8| Mouse DNA sequence from clone RP23-416H10 on chr... 42 2.2
27gb|AC137970.10| Mus musculus chromosome 3, clone RP23-438E13, co... 40 8.8
28gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence 40 8.8
29gb|AC073906.6| Trypanosoma brucei chromosome 6 clone RPCI93-3A7,... 40 8.8
30gb|AC138382.10| Mus musculus chromosome 1, clone RP24-400E14, co... 40 8.8
31gb|AC150855.6| Bos taurus BAC CH240-472P12 (Children's Hospital... 40 8.8
32gb|AC115865.9| Mus musculus chromosome 3, clone RP24-314I8, comp... 40 8.8
33gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, comp... 40 8.8
34ref|XM_821192.1| Trypanosoma brucei TREU927 clone RPCI93-3A7 hyp... 40 8.8
35gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosom... 40 8.8
36gb|AC123541.3| Oryctolagus cuniculus clone LB1-184A7, complete s... 40 8.8
37emb|Z84474.1|HS111M5 Human DNA sequence from clone RP1-111M5 on ... 40 8.8
38emb|BX119924.8| Human DNA sequence from clone DASS-46L4 on chrom... 40 8.8
39emb|BX000360.7| Human DNA sequence from clone DAQB-5M14 on chrom... 40 8.8
40emb|AL662871.9| Human DNA sequence from clone XXbac-322C17 on ch... 40 8.8
41emb|AL662859.5| Human DNA sequence from clone XXbac-196D17 on ch... 40 8.8
42gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence 40 8.8
43gb|AC158590.3| Mus musculus chromosome 5, clone RP24-388K6, comp... 40 8.8
44emb|AL008634.1|HS396D17 Human DNA sequence from clone RP3-396D17... 40 8.8
45emb|CR759942.12| Human DNA sequence from clone DAAP-182E11 on ch... 40 8.8
46gb|AC163106.4| Mus musculus BAC clone RP23-278O13 from chromosom... 40 8.8
47gb|AC069242.13| Homo sapiens 3 BAC RP11-554J1 (Roswell Park Canc... 40 8.8
48emb|BX510925.7| Zebrafish DNA sequence from clone CH211-278B8 in... 40 8.8
49gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold 40 8.8
50dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
51dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
52gb|AC007381.3| Homo sapiens BAC clone RP11-158I21 from 2, comple... 40 8.8
53dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
54dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
55gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, co... 40 8.8
56gb|AC138609.4| Mus musculus BAC clone RP24-360D18 from 3, comple... 40 8.8
57dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 8.8 
>ref|NM_185755.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1694

 Score =  434 bits (219), Expect = e-118
 Identities = 330/367 (89%)
 Strand = Plus / Minus

                                                                        
Query: 278  ctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagtt 337
            |||||||||||| || ||||| || || ||||| ||||||||||||||||||||||  ||
Sbjct: 1466 ctgcaggaagctcgcgtacttcgcaccaaggaaaagcctctgcacgcagagcagggcatt 1407

                                                                        
Query: 338  cttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgag 397
            |||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 1406 cttcctcacttcggcgttctcgtggttcatgagcttcatcactcggtccttcgccttcag 1347

                                                                        
Query: 398  gtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagca 457
             ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 atctgccaccacaatgcgcccagaagggtggtactgaaggaactgtgagaggtcatagca 1287

                                                                        
Query: 458  ggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgtag 517
            |||||| ||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||
Sbjct: 1286 ggcgacagcaagagcagtcgtgtcggccgatgtgtcgatgattgtcataagcacacgtag 1227

                                                                        
Query: 518  gatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtcttt 577
             ||||||||||||||||| ||||| ||| | || ||||| ||||||||| ||||||||||
Sbjct: 1226 aatctggaaatcattttcttcaaaattattaatgttctcgcgccagaaacttgggtcttt 1167

                                                                        
Query: 578  gtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatga 637
            ||||||||||||||| ||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct: 1166 gtgcattggagaccagtcaagatggccaagaagaacttgttgcttgtacttctcaaatga 1107

                   
Query: 638  gctcaac 644
             ||||||
Sbjct: 1106 actcaac 1100



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/43 (90%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                       
Query: 78   ttattacatcgagcaagccatagctgagattatttattataca 120
            |||||||||||||||||  ||||||  ||||||||||||||||
Sbjct: 1670 ttattacatcgagcaaggaatagct--gattatttattataca 1630
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>dbj|AK104331.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D11, full
            insert sequence
          Length = 1694

 Score =  434 bits (219), Expect = e-118
 Identities = 330/367 (89%)
 Strand = Plus / Minus

                                                                        
Query: 278  ctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagtt 337
            |||||||||||| || ||||| || || ||||| ||||||||||||||||||||||  ||
Sbjct: 1466 ctgcaggaagctcgcgtacttcgcaccaaggaaaagcctctgcacgcagagcagggcatt 1407

                                                                        
Query: 338  cttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgag 397
            |||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 1406 cttcctcacttcggcgttctcgtggttcatgagcttcatcactcggtccttcgccttcag 1347

                                                                        
Query: 398  gtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagca 457
             ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 atctgccaccacaatgcgcccagaagggtggtactgaaggaactgtgagaggtcatagca 1287

                                                                        
Query: 458  ggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgtag 517
            |||||| ||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||
Sbjct: 1286 ggcgacagcaagagcagtcgtgtcggccgatgtgtcgatgattgtcataagcacacgtag 1227

                                                                        
Query: 518  gatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtcttt 577
             ||||||||||||||||| ||||| ||| | || ||||| ||||||||| ||||||||||
Sbjct: 1226 aatctggaaatcattttcttcaaaattattaatgttctcgcgccagaaacttgggtcttt 1167

                                                                        
Query: 578  gtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatga 637
            ||||||||||||||| ||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct: 1166 gtgcattggagaccagtcaagatggccaagaagaacttgttgcttgtacttctcaaatga 1107

                   
Query: 638  gctcaac 644
             ||||||
Sbjct: 1106 actcaac 1100



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/43 (90%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                       
Query: 78   ttattacatcgagcaagccatagctgagattatttattataca 120
            |||||||||||||||||  ||||||  ||||||||||||||||
Sbjct: 1670 ttattacatcgagcaaggaatagct--gattatttattataca 1630
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>dbj|AK067714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120K21, full
            insert sequence
          Length = 1764

 Score =  434 bits (219), Expect = e-118
 Identities = 330/367 (89%)
 Strand = Plus / Minus

                                                                        
Query: 278  ctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagtt 337
            |||||||||||| || ||||| || || ||||| ||||||||||||||||||||||  ||
Sbjct: 1467 ctgcaggaagctcgcgtacttcgcaccaaggaaaagcctctgcacgcagagcagggcatt 1408

                                                                        
Query: 338  cttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgag 397
            |||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 1407 cttcctcacttcggcgttctcgtggttcatgagcttcatcactcggtccttcgccttcag 1348

                                                                        
Query: 398  gtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagca 457
             ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1347 atctgccaccacaatgcgcccagaagggtggtactgaaggaactgtgagaggtcatagca 1288

                                                                        
Query: 458  ggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgtag 517
            |||||| ||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||
Sbjct: 1287 ggcgacagcaagagcagtcgtgtcggccgatgtgtcgatgattgtcataagcacacgtag 1228

                                                                        
Query: 518  gatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtcttt 577
             ||||||||||||||||| ||||| ||| | || ||||| ||||||||| ||||||||||
Sbjct: 1227 aatctggaaatcattttcttcaaaattattaatgttctcgcgccagaaacttgggtcttt 1168

                                                                        
Query: 578  gtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatga 637
            ||||||||||||||| ||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct: 1167 gtgcattggagaccagtcaagatggccaagaagaacttgttgcttgtacttctcaaatga 1108

                   
Query: 638  gctcaac 644
             ||||||
Sbjct: 1107 actcaac 1101



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/43 (90%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                       
Query: 78   ttattacatcgagcaagccatagctgagattatttattataca 120
            |||||||||||||||||  ||||||  ||||||||||||||||
Sbjct: 1671 ttattacatcgagcaaggaatagct--gattatttattataca 1631
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>gb|AY108648.1| Zea mays PCO090155 mRNA sequence
          Length = 1795

 Score =  325 bits (164), Expect = 1e-85
 Identities = 317/368 (86%)
 Strand = Plus / Minus

                                                                        
Query: 277  cctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagt 336
            |||||||||| || |||||||| ||||| ||||||||||||||||| |||| ||  |  |
Sbjct: 1499 cctgcaggaaactggcatactttgcgccaaggaagagcctctgcacacagatcaatgcat 1440

                                                                        
Query: 337  tcttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttga 396
            | ||||||||||| | ||| || || |||||||||||||||||||||||||| |||||||
Sbjct: 1439 ttttcctcacttcagtgttctcatgattcatgagtttcatgactcggtccttggccttga 1380

                                                                        
Query: 397  ggtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagc 456
            ||||||||||||| |  |||||||| || |||||||| ||||||||||||||||| ||||
Sbjct: 1379 ggtctgccaccacgattcggccagatggatggtactggaggaactgtgagaggtcgtagc 1320

                                                                        
Query: 457  aggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgta 516
            |||| || |||||||| ||||||||  |||||||||| |||| |||||| || || || |
Sbjct: 1319 aggccacggcaagagcggtggtgtcacttgatgtgtcaatgattgtcatgagaactcgca 1260

                                                                        
Query: 517  ggatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctt 576
            | |||||||||||||| || ||||| ||  | || ||||| ||||||||| |||| ||||
Sbjct: 1259 gaatctggaaatcattctcttcaaaattgttaatgttctcacgccagaaacttggatctt 1200

                                                                        
Query: 577  tgtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatg 636
            |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |
Sbjct: 1199 tgtgcattggagaccagtcaagatgaccaagaagaacttgctgtttgtacttatcaaagg 1140

                    
Query: 637  agctcaac 644
            | ||||||
Sbjct: 1139 aactcaac 1132



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 65   gcccatggacatcttattacatcgagca 92
            |||||||||||  |||||||||||||||
Sbjct: 1686 gcccatggacactttattacatcgagca 1659
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>gb|BT019196.1| Zea mays clone Contig868.F mRNA sequence
          Length = 944

 Score =  317 bits (160), Expect = 3e-83
 Identities = 316/368 (85%)
 Strand = Plus / Minus

                                                                       
Query: 277 cctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagt 336
           |||||||||| || |||||||| ||||| ||||||||||||||||| |||| ||  |  |
Sbjct: 675 cctgcaggaaactggcatactttgcgccaaggaagagcctctgcacacagatcaatgcat 616

                                                                       
Query: 337 tcttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttga 396
           | ||||||||||| | ||| || || |||||||||||||||||||||||||| |||||||
Sbjct: 615 ttttcctcacttcagtgttctcatgattcatgagtttcatgactcggtccttagccttga 556

                                                                       
Query: 397 ggtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagc 456
           ||||||||||||| |  |||||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 555 ggtctgccaccacgattcggccagatggatggtactgaaggaattgtgagaggtcgtagc 496

                                                                       
Query: 457 aggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgta 516
           |||| || |||||||| ||||||||  |||||||||| |||| |||||| || || |  |
Sbjct: 495 aggccacggcaagagcggtggtgtcacttgatgtgtcaatgattgtcatgagaactctca 436

                                                                       
Query: 517 ggatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctt 576
           | ||||||||||||||||| ||||| ||  | || ||||| ||||||||| |||| ||||
Sbjct: 435 gaatctggaaatcattttcttcaaaattgttaatgttctcacgccagaaacttggatctt 376

                                                                       
Query: 577 tgtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatg 636
           |||||||||||||||| || ||||| |||||||| ||||||||||||||||||||||| |
Sbjct: 375 tgtgcattggagaccagtccagatgaccaagaagaacttgctgtttgtacttatcaaagg 316

                   
Query: 637 agctcaac 644
           | ||||||
Sbjct: 315 aactcaac 308



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 65  gcccatggacatcttattacatcgagca 92
           |||||||||||  |||||||||||||||
Sbjct: 862 gcccatggacactttattacatcgagca 835
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>gb|BT018553.1| Zea mays clone EL01N0439D12.d mRNA sequence
          Length = 1360

 Score =  313 bits (158), Expect = 4e-82
 Identities = 308/358 (86%)
 Strand = Plus / Minus

                                                                        
Query: 277  cctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagt 336
            |||||||||| || |||||||| ||||| ||||||||||||||||| |||| ||  |  |
Sbjct: 1088 cctgcaggaaactggcatactttgcgccaaggaagagcctctgcacacagatcaatgcat 1029

                                                                        
Query: 337  tcttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttga 396
            | ||||||||||| | ||| || || |||||||||||||||||||||||||| |||||||
Sbjct: 1028 ttttcctcacttcagtgttctcatgattcatgagtttcatgactcggtccttagccttga 969

                                                                        
Query: 397  ggtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagc 456
            ||||||||||||| |  |||||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 968  ggtctgccaccacgattcggccagatggatggtactgaaggaattgtgagaggtcgtagc 909

                                                                        
Query: 457  aggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgta 516
            |||| || |||||||| ||||||||  |||||||||| |||| |||||| || || |  |
Sbjct: 908  aggccacggcaagagcggtggtgtcacttgatgtgtcaatgattgtcatgagaactctca 849

                                                                        
Query: 517  ggatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctt 576
            | ||||||||||||||||| ||||| ||  | || ||||| ||||||||| |||| ||||
Sbjct: 848  gaatctggaaatcattttcttcaaaattgttaatgttctcacgccagaaacttggatctt 789

                                                                      
Query: 577  tgtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaa 634
            |||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||
Sbjct: 788  tgtgcattggagaccagtccagatgaccaagaagaacttgctgtttgtacttatcaaa 731



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 65   gcccatggacatcttattacatcgagca 92
            |||||||||||  |||||||||||||||
Sbjct: 1275 gcccatggacactttattacatcgagca 1248
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  297 bits (150), Expect = 2e-77
 Identities = 222/246 (90%)
 Strand = Plus / Minus

                                                                            
Query: 278      ctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagtt 337
                |||||||||||| || ||||| || || ||||| ||||||||||||||||||||||  ||
Sbjct: 21768446 ctgcaggaagctcgcgtacttcgcaccaaggaaaagcctctgcacgcagagcagggcatt 21768387

                                                                            
Query: 338      cttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgag 397
                |||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 21768386 cttcctcacttcggcgttctcgtggttcatgagcttcatcactcggtccttcgccttcag 21768327

                                                                            
Query: 398      gtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagca 457
                 ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 21768326 atctgccaccacaatgcgcccagaagggtggtactgaaggaactgtgagaggtcatagca 21768267

                                                                            
Query: 458      ggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgtag 517
                |||||| ||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||
Sbjct: 21768266 ggcgacagcaagagcagtcgtgtcggccgatgtgtcgatgattgtcataagcacacgtag 21768207

                      
Query: 518      gatctg 523
                 |||||
Sbjct: 21768206 aatctg 21768201



 Score =  143 bits (72), Expect = 8e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                            
Query: 521      ctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttgtg 580
                ||||||||||||||| ||||| ||| | || ||||| ||||||||| |||||||||||||
Sbjct: 21767698 ctggaaatcattttcttcaaaattattaatgttctcgcgccagaaacttgggtctttgtg 21767639

                                                                            
Query: 581      cattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatgagct 640
                |||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||| ||
Sbjct: 21767638 cattggagaccagtcaagatggccaagaagaacttgttgcttgtacttctcaaatgaact 21767579

                    
Query: 641      caac 644
                ||||
Sbjct: 21767578 caac 21767575



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/43 (90%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                           
Query: 78       ttattacatcgagcaagccatagctgagattatttattataca 120
                |||||||||||||||||  ||||||  ||||||||||||||||
Sbjct: 21768650 ttattacatcgagcaaggaatagct--gattatttattataca 21768610
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534A03
          Length = 153170

 Score =  297 bits (150), Expect = 2e-77
 Identities = 222/246 (90%)
 Strand = Plus / Minus

                                                                         
Query: 278   ctgcaggaagctagcatacttggcgccgaggaagagcctctgcacgcagagcagggagtt 337
             |||||||||||| || ||||| || || ||||| ||||||||||||||||||||||  ||
Sbjct: 85629 ctgcaggaagctcgcgtacttcgcaccaaggaaaagcctctgcacgcagagcagggcatt 85570

                                                                         
Query: 338   cttcctcacttcggcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgag 397
             |||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 85569 cttcctcacttcggcgttctcgtggttcatgagcttcatcactcggtccttcgccttcag 85510

                                                                         
Query: 398   gtctgccaccactaggcggccagaagggtggtactgaaggaactgtgagaggtcatagca 457
              ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 85509 atctgccaccacaatgcgcccagaagggtggtactgaaggaactgtgagaggtcatagca 85450

                                                                         
Query: 458   ggcgactgcaagagcagtggtgtcggttgatgtgtcgatgactgtcataaggacacgtag 517
             |||||| ||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||
Sbjct: 85449 ggcgacagcaagagcagtcgtgtcggccgatgtgtcgatgattgtcataagcacacgtag 85390

                   
Query: 518   gatctg 523
              |||||
Sbjct: 85389 aatctg 85384



 Score =  143 bits (72), Expect = 8e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                         
Query: 521   ctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttgtg 580
             ||||||||||||||| ||||| ||| | || ||||| ||||||||| |||||||||||||
Sbjct: 84881 ctggaaatcattttcttcaaaattattaatgttctcgcgccagaaacttgggtctttgtg 84822

                                                                         
Query: 581   cattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatgagct 640
             |||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||| ||
Sbjct: 84821 cattggagaccagtcaagatggccaagaagaacttgttgcttgtacttctcaaatgaact 84762

                 
Query: 641   caac 644
             ||||
Sbjct: 84761 caac 84758



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/43 (90%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                        
Query: 78    ttattacatcgagcaagccatagctgagattatttattataca 120
             |||||||||||||||||  ||||||  ||||||||||||||||
Sbjct: 85833 ttattacatcgagcaaggaatagct--gattatttattataca 85793
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>emb|AJ438592.1|MCR438592 Mesembryanthemum crystallinum mRNA for putative vacuolar ATPase
            subunit H (vha-H gene)
          Length = 1735

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 105/125 (84%)
 Strand = Plus / Minus

                                                                        
Query: 518  gatctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtcttt 577
            |||||| |||||||||||||||||||| || || || || ||||||||    |  |||||
Sbjct: 1286 gatctgaaaatcattttcctcaaagttggtaatgttatcacgccagaagaaagtatcttt 1227

                                                                        
Query: 578  gtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaatga 637
            ||||| ||| ||||||||||||||||||||||| |||| |||||| || || ||||||||
Sbjct: 1226 gtgcactggggaccaatcaagatggccaagaagaacttcctgtttatatttgtcaaatga 1167

                 
Query: 638  gctca 642
             ||||
Sbjct: 1166 actca 1162
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>emb|AJ698924.1| Populus deltoides x Populus maximowiczii partial mRNA for putative
           vacuolar ATPase subunit H
          Length = 392

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                       
Query: 519 atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 578
           |||||||||||||| || ||||| ||||| ||||| || |||||||||   || ||||||
Sbjct: 106 atctggaaatcattctcttcaaaattagttatattttcacgccagaaagcaggatctttg 47

                                     
Query: 579 tgcattggagaccaatcaagatggcc 604
           ||||| ||||||||||||||||||||
Sbjct: 46  tgcataggagaccaatcaagatggcc 21
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>gb|DQ493959.1| Musa acuminata vacuolar ATPase subunit H mRNA, partial cds
          Length = 317

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 507 aggacacgtaggatctggaaatcattttcctcaaagttagtgatattctctcgccagaaa 566
           |||||||| |||||||||||||| ||||| ||||| || || ||||| || |||||||| 
Sbjct: 240 aggacacgcaggatctggaaatcgttttcttcaaaatttgtaatattttcacgccagaat 181

                                                                       
Query: 567 tttgggtctttgtgcattggagaccaatcaagatggccaagaagcacttgctgtttgtac 626
             ||| || |||||||| ||| |||| |||||||| |||||||| |||| ||| || || 
Sbjct: 180 cctggatccttgtgcataggataccagtcaagatgaccaagaaggacttcctgcttatat 121

                   
Query: 627 ttatcaaa 634
           ||||||||
Sbjct: 120 ttatcaaa 113
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>gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete sequence
          Length = 119208

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 98/115 (85%), Gaps = 2/115 (1%)
 Strand = Plus / Minus

                                                                         
Query: 521   ctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttggg-tctttgt 579
             |||||||||||  || ||||| || || ||||| |||||||| |||| |||| |||||||
Sbjct: 66265 ctggaaatcatgctcttcaaaattggttatattttctcgcca-aaatatgggatctttgt 66207

                                                                    
Query: 580   gcattggagaccaatcaagatggccaagaagcacttgctgtttgtacttatcaaa 634
             |||| ||||||||||| |||| ||||||||| ||||  || ||||||||||||||
Sbjct: 66206 gcatgggagaccaatccagattgccaagaagaacttcttgcttgtacttatcaaa 66152
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>gb|AY225129.1| Suaeda maritima subsp. salsa putative vacuolar ATPase subunit H
            protein mRNA, complete cds
          Length = 1969

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 518  gatctggaaatcattttcctcaaagttagtgatattctctcgcca 562
            |||||||||||||||||||||||||||  |||||||||| |||||
Sbjct: 1252 gatctggaaatcattttcctcaaagttcttgatattctcccgcca 1208
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>ref|NM_114072.2| Arabidopsis thaliana ATP binding / hydrogen-transporting ATP
            synthase, rotational mechanism / hydrogen-transporting
            ATPase, rotational mechanism AT3G42050 mRNA, complete cds
          Length = 1884

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 519  atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 578
            |||||||| || || |||||||||   |||| |||||| ||||||||||| |  || |||
Sbjct: 1287 atctggaagtcgttctcctcaaagcatgtgacattctcacgccagaaattggtctccttg 1228

                                               
Query: 579  tgcattggagaccaatcaagatggccaagaagcac 613
            ||||||||   ||| |||||||||||||| |||||
Sbjct: 1227 tgcattgggttccagtcaagatggccaaggagcac 1193



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 351  gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 403
            ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 1455 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 1403
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>gb|AY091685.1| Arabidopsis thaliana AT3g42050/F4M19_10 mRNA, complete cds
          Length = 1326

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 519  atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 578
            |||||||| || || |||||||||   |||| |||||| ||||||||||| |  || |||
Sbjct: 1079 atctggaagtcgttctcctcaaagcatgtgacattctcacgccagaaattggtctccttg 1020

                                               
Query: 579  tgcattggagaccaatcaagatggccaagaagcac 613
            ||||||||   ||| |||||||||||||| |||||
Sbjct: 1019 tgcattgggttccagtcaagatggccaaggagcac 985



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 351  gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 403
            ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 1247 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 1195
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>gb|AY037176.1| Arabidopsis thaliana AT3g42050/F4M19_10 mRNA, complete cds
          Length = 1704

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 519  atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 578
            |||||||| || || |||||||||   |||| |||||| ||||||||||| |  || |||
Sbjct: 1263 atctggaagtcgttctcctcaaagcatgtgacattctcacgccagaaattggtctccttg 1204

                                               
Query: 579  tgcattggagaccaatcaagatggccaagaagcac 613
            ||||||||   ||| |||||||||||||| |||||
Sbjct: 1203 tgcattgggttccagtcaagatggccaaggagcac 1169



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 351  gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 403
            ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 1431 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 1379
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>emb|BX823850.1|CNS0A6JD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS83ZB01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 754

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                       
Query: 519 atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 578
           |||||||| || || |||||||||   |||| |||||| ||||||||||| |  || |||
Sbjct: 267 atctggaagtcgttctcctcaaagcatgtgacattctcacgccagaaattggtctccttg 208

                                              
Query: 579 tgcattggagaccaatcaagatggccaagaagcac 613
           ||||||||   ||| |||||||||||||| |||||
Sbjct: 207 tgcattgggttccagtcaagatggccaaggagcac 173



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 351 gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 403
           ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 435 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 383
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>emb|AL356013.1|ATF4M19 Arabidopsis thaliana DNA chromosome 3, BAC clone F4M19
          Length = 94342

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 76/93 (81%)
 Strand = Plus / Plus

                                                                         
Query: 521   ctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttgtg 580
             |||||| || || |||||||||   |||| |||||| ||||||||||| |  || |||||
Sbjct: 19265 ctggaagtcgttctcctcaaagcatgtgacattctcacgccagaaattggtctccttgtg 19324

                                              
Query: 581   cattggagaccaatcaagatggccaagaagcac 613
             ||||||   ||| |||||||||||||| |||||
Sbjct: 19325 cattgggttccagtcaagatggccaaggagcac 19357



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 351   gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 403
             ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 18973 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 19025
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>emb|BX823221.1|CNS0A6OK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS12ZE12 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1696

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 351  gcgttgtcgtggttcatgagtttcatgactcggtcctttgccttgaggtctgc 403
            ||||| |||||||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 1381 gcgttctcgtggtttatcagcttcatcactcgctcttttgccttgaggtctgc 1329



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Minus

                                                                        
Query: 519  atctggaaatcattttcctcaaagttagtgatattctctcgccagaaatttgggtctttg 578
            |||||||| || || |||||||||   |||| |||||| ||||||| ||| |  || |||
Sbjct: 1213 atctggaagtcgttctcctcaaagcatgtgacattctcacgccagagattggtctccttg 1154

                                               
Query: 579  tgcattggagaccaatcaagatggccaagaagcac 613
            ||||||||   ||| |||||||||||||| |||||
Sbjct: 1153 tgcattgggttccagtcaagatggccaaggagcac 1119
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>gb|AY544986.1| Litopenaeus vannamei Kazal-type proteinase inhibitor mRNA, complete
           cds
          Length = 1279

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 384 tcctttgccttgaggtctgcca 405
           ||||||||||||||||||||||
Sbjct: 34  tcctttgccttgaggtctgcca 13
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>gb|BC084672.1| Xenopus laevis MGC82842 protein, mRNA (cDNA clone MGC:98234
           IMAGE:4884385), complete cds
          Length = 2879

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 161 gacaagaaattgcagaggtct 181
           |||||||||||||||||||||
Sbjct: 733 gacaagaaattgcagaggtct 753
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>emb|X95549.1|XLFIMB1GN X.laevis FIM-B.1 gene
          Length = 7026

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 181  ttacattctcaatcactgttt 201
            |||||||||||||||||||||
Sbjct: 3795 ttacattctcaatcactgttt 3815
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>emb|BX119969.4| Mouse DNA sequence from clone RP23-58N9 on chromosome 13, complete
             sequence
          Length = 52119

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 327   agcagggagttcttcctcact 347
             |||||||||||||||||||||
Sbjct: 10469 agcagggagttcttcctcact 10489
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>gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome 13, complete sequence
          Length = 184868

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 327   agcagggagttcttcctcact 347
             |||||||||||||||||||||
Sbjct: 55598 agcagggagttcttcctcact 55578
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>gb|AC136426.2| Homo sapiens chromosome 5 clone CTD-2008N14, complete sequence
          Length = 121099

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 521   ctggaaatcattttcctcaaa 541
             |||||||||||||||||||||
Sbjct: 54238 ctggaaatcattttcctcaaa 54258
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>emb|AL954325.8| Mouse DNA sequence from clone RP23-416H10 on chromosome 2, complete
             sequence
          Length = 195457

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   ttacattctcaatcactgttt 201
             |||||||||||||||||||||
Sbjct: 58836 ttacattctcaatcactgttt 58856
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>gb|AC137970.10| Mus musculus chromosome 3, clone RP23-438E13, complete sequence
          Length = 212827

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 600    tggccaagaagcacttgctg 619
              ||||||||||||||||||||
Sbjct: 200388 tggccaagaagcacttgctg 200369
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>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    gagttcttcctcacttcggc 352
              ||||||||||||||||||||
Sbjct: 425713 gagttcttcctcacttcggc 425732
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>gb|AC073906.6| Trypanosoma brucei chromosome 6 clone RPCI93-3A7, complete sequence
          Length = 175357

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   gagttcttcctcacttcggc 352
             ||||||||||||||||||||
Sbjct: 77529 gagttcttcctcacttcggc 77548
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>gb|AC138382.10| Mus musculus chromosome 1, clone RP24-400E14, complete sequence
          Length = 136819

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     aaatcgtgtttcttactttatttc 31
             |||||||||||||| |||||||||
Sbjct: 47859 aaatcgtgtttctttctttatttc 47836
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>gb|AC150855.6| Bos taurus  BAC CH240-472P12 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 168955

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   acttcatataaatacaaaactttg 266
             ||||||||||| ||||||||||||
Sbjct: 71330 acttcatataactacaaaactttg 71353
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>gb|AC115865.9| Mus musculus chromosome 3, clone RP24-314I8, complete sequence
          Length = 200362

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 600    tggccaagaagcacttgctg 619
              ||||||||||||||||||||
Sbjct: 104516 tggccaagaagcacttgctg 104497
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>gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, complete sequence
          Length = 274518

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 600    tggccaagaagcacttgctg 619
              ||||||||||||||||||||
Sbjct: 125908 tggccaagaagcacttgctg 125889
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>ref|XM_821192.1| Trypanosoma brucei TREU927 clone RPCI93-3A7 hypothetical protein
            (Tb927.6.1070) partial mRNA
          Length = 2796

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 333  gagttcttcctcacttcggc 352
            ||||||||||||||||||||
Sbjct: 1935 gagttcttcctcacttcggc 1916
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>gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosome 8, complete sequence
          Length = 187246

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 600    tggccaagaagcacttgctg 619
              ||||||||||||||||||||
Sbjct: 135209 tggccaagaagcacttgctg 135190
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>gb|AC123541.3| Oryctolagus cuniculus clone LB1-184A7, complete sequence
          Length = 190901

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   tcaaatcaaataacagcaag 152
             ||||||||||||||||||||
Sbjct: 43379 tcaaatcaaataacagcaag 43398
to top
>emb|Z84474.1|HS111M5 Human DNA sequence from clone RP1-111M5 on chromosome 6p21.3 Contains an
              RPL13 (60S Ribosomal protein L13, BBC1) pseudogene, a zinc
              finger protein pseudogene, the 3' end of the RFP gene for
              ret finger protein, four CpG islands, ESTs, STSs and GSSs,
              complete sequence
          Length = 107526

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    cagggagttcttcctcactt 348
              ||||||||||||||||||||
Sbjct: 103329 cagggagttcttcctcactt 103348
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>emb|BX119924.8| Human DNA sequence from clone DASS-46L4 on chromosome 6, complete
             sequence
          Length = 92058

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   cagggagttcttcctcactt 348
             ||||||||||||||||||||
Sbjct: 79868 cagggagttcttcctcactt 79887
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>emb|BX000360.7| Human DNA sequence from clone DAQB-5M14 on chromosome 6 Contains the
             ZNF463P pseudogene for zinc finger protein 463, the HCG14
             gene for HLA complex group 14, the 3' end of the RFP gene
             for ret finger protein and 1 CpG island, complete sequence
          Length = 44401

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   cagggagttcttcctcactt 348
             ||||||||||||||||||||
Sbjct: 40171 cagggagttcttcctcactt 40190
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>emb|AL662871.9| Human DNA sequence from clone XXbac-322C17 on chromosome 6 contains the
             RFP gene for ret finger protein gene, a zinc finger
             protein pseudogene, a novel protein and three CpG islands,
             complete sequence
          Length = 103158

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   cagggagttcttcctcactt 348
             ||||||||||||||||||||
Sbjct: 47081 cagggagttcttcctcactt 47100
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>emb|AL662859.5| Human DNA sequence from clone XXbac-196D17 on chromosome 6 contains a
             zinc finger protein pseudogene, the RFP gene for ret
             finger protein and three CpG islands, complete sequence
          Length = 61233

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   cagggagttcttcctcactt 348
             ||||||||||||||||||||
Sbjct: 45244 cagggagttcttcctcactt 45263
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>gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence
          Length = 147908

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 189    tcaatcactgtttcaccattctga 212
              ||||||||||||||||| ||||||
Sbjct: 147751 tcaatcactgtttcacctttctga 147774
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>gb|AC158590.3| Mus musculus chromosome 5, clone RP24-388K6, complete sequence
          Length = 186514

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tcgtgtttcttactttattt 30
              ||||||||||||||||||||
Sbjct: 159315 tcgtgtttcttactttattt 159296
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>emb|AL008634.1|HS396D17 Human DNA sequence from clone RP3-396D17 on chromosome 1p33-35.3
             Contains EST, STS, GSS, complete sequence
          Length = 152592

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tcatgaatcaaatcaaataa 145
             ||||||||||||||||||||
Sbjct: 43996 tcatgaatcaaatcaaataa 43977
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>emb|CR759942.12| Human DNA sequence from clone DAAP-182E11 on chromosome 6, complete
             sequence
          Length = 69422

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   cagggagttcttcctcactt 348
             ||||||||||||||||||||
Sbjct: 43984 cagggagttcttcctcactt 44003
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>gb|AC163106.4| Mus musculus BAC clone RP23-278O13 from chromosome 3, complete sequence
          Length = 200512

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    tgagattatttattatacac 121
              ||||||||||||||||||||
Sbjct: 158513 tgagattatttattatacac 158532
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>gb|AC069242.13| Homo sapiens 3 BAC RP11-554J1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 184664

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   aaactggacaagaaattgca 174
             ||||||||||||||||||||
Sbjct: 21156 aaactggacaagaaattgca 21137
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>emb|BX510925.7| Zebrafish DNA sequence from clone CH211-278B8 in linkage group 5,
             complete sequence
          Length = 75254

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    tcggaggagagaaatactgc 66
             ||||||||||||||||||||
Sbjct: 35598 tcggaggagagaaatactgc 35617
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>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 133     tcaaatcaaataacagcaag 152
               ||||||||||||||||||||
Sbjct: 1742233 tcaaatcaaataacagcaag 1742252
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 124     gttcatgaatcaaatcaaat 143
               ||||||||||||||||||||
Sbjct: 9717566 gttcatgaatcaaatcaaat 9717585
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 124      gttcatgaatcaaatcaaat 143
                ||||||||||||||||||||
Sbjct: 15976109 gttcatgaatcaaatcaaat 15976128
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>gb|AC007381.3| Homo sapiens BAC clone RP11-158I21 from 2, complete sequence
          Length = 152081

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   cttcatataaatacaaaact 263
             ||||||||||||||||||||
Sbjct: 97020 cttcatataaatacaaaact 97001
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>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0091E23
          Length = 155939

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   gttcatgaatcaaatcaaat 143
             ||||||||||||||||||||
Sbjct: 67694 gttcatgaatcaaatcaaat 67713
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>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0706E03
          Length = 188028

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    gttcatgaatcaaatcaaat 143
              ||||||||||||||||||||
Sbjct: 157663 gttcatgaatcaaatcaaat 157682
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>gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, complete sequence
          Length = 197546

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 597    agatggccaagaagcacttg 616
              ||||||||||||||||||||
Sbjct: 105026 agatggccaagaagcacttg 105045
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>gb|AC138609.4| Mus musculus BAC clone RP24-360D18 from 3, complete sequence
          Length = 151011

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tgagattatttattatacac 121
             ||||||||||||||||||||
Sbjct: 98682 tgagattatttattatacac 98663
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>dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06J16, TM0083,
             complete sequence
          Length = 120016

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   atcaaatcaaataacagcaa 151
             ||||||||||||||||||||
Sbjct: 52359 atcaaatcaaataacagcaa 52378


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,752,259
Number of Sequences: 3902068
Number of extensions: 6752259
Number of successful extensions: 126929
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126644
Number of HSP's gapped (non-prelim): 277
length of query: 644
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 621
effective length of database: 17,143,297,704
effective search space: 10645987874184
effective search space used: 10645987874184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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