>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 2 (EC 1.6.5.4) (MDAR 2)
          Length = 488

 Score = 90.1 bits (222), Expect(2) = 2e-23
 Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
 Frame = -1

Query: 531 GTMSEEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRDDYEALSVVVRRKTKAS-DM 355
           G  + +V+H+G++  +   FGAYWV KG + G+FLEGG +++YE +S   + K   + D+
Sbjct: 356 GDPTGDVVHFGEY-EDGKSFGAYWVKKGHLVGSFLEGGTKEEYETISKATQLKPAVTIDL 414

Query: 354 SELERQGLAFA---IQESK----KEVP-------DSGVTLGEKPTFVWYATAGVVAAVSI 217
            ELER+GL FA   + + K    K++P        + V + +KP +VW+A  GVV A S+
Sbjct: 415 EELEREGLGFAHTVVSQQKVPEVKDIPSAEMVKQSASVVMIKKPLYVWHAATGVVVAASV 474

Query: 216 SAF 208
           +AF
Sbjct: 475 AAF 477



 Score = 38.5 bits (88), Expect(2) = 2e-23
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 581 LPFFYSRVFTLSWQFYG 531
           LPFFYSRVF  SWQFYG
Sbjct: 340 LPFFYSRVFAFSWQFYG 356

>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score = 50.1 bits (118), Expect(2) = 4e-11
 Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = -1

Query: 516 EVIHYGDFTSNSP--RFGAYWVSKGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELE 343
           E + +GD   NS   +FG YW+  G+I GAFLE G+ ++ +A++ V + +  A+ + +L 
Sbjct: 365 ETVLFGDADPNSATHKFGQYWIKDGKIVGAFLESGSPEENKAIAKVAKVQPPAT-LDQLA 423

Query: 342 RQGLAFA 322
           ++G++FA
Sbjct: 424 QEGISFA 430



 Score = 37.0 bits (84), Expect(2) = 4e-11
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 581 LPFFYSRVFTLSWQFYG 531
           LP+FYSR F LSWQFYG
Sbjct: 344 LPYFYSRAFDLSWQFYG 360

>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC|
           1.6.5.4) (MDAR seedling) (Ascorbate free radical
           reductase seedling) (AFR reductase seedling)
          Length = 434

 Score = 48.9 bits (115), Expect(2) = 1e-10
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 12/73 (16%)
 Frame = -1

Query: 504 YGD-------FTSNSP-----RFGAYWVSKGQITGAFLEGGNRDDYEALSVVVRRKTKAS 361
           YGD       F  NSP     +FG+YW+  G++ GAFLE G+ ++ +A++ V R +    
Sbjct: 359 YGDNVGDAVLFGDNSPDSATHKFGSYWIKDGKVVGAFLESGSPEENKAIAKVARIQPSVE 418

Query: 360 DMSELERQGLAFA 322
               L ++G++FA
Sbjct: 419 SSDLLLKEGISFA 431



 Score = 36.2 bits (82), Expect(2) = 1e-10
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 581 LPFFYSRVFTLSWQFYG 531
           LP+FYSR F LSWQFYG
Sbjct: 344 LPYFYSRSFDLSWQFYG 360

>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
 Frame = -1

Query: 594 DVDYLAILLLKSLHTVLAVLRGTMSEEVIHYGDF--TSNSPRFGAYWVSKGQITGAFLEG 421
           + DYL     +S           + E V+ +GD    S+ P+FG YW+ +G++ GAFLEG
Sbjct: 339 EYDYLPYFYSRSFDLSWQFYGDNVGETVL-FGDNDPASSKPKFGTYWIKEGKVVGAFLEG 397

Query: 420 GNRDDYEALSVVVRRKTKASDMSELERQGLAFA 322
           G  D+ +A++ V R K    D+++L  +GL+FA
Sbjct: 398 GTPDENKAIAKVARAKPAVEDVNQLAEEGLSFA 430

>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 3 (EC 1.6.5.4) (MDAR 3)
          Length = 434

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = -1

Query: 594 DVDYLAILLLKSLHTVLAVLRGTMSEEVIHYGDFTSN-SPRFGAYWVSKGQITGAFLEGG 418
           + DYL     +S           + + V+      SN  PRFGAYWV  G++ GAF+EGG
Sbjct: 340 EYDYLPFFYSRSFDLSWQFYGDNVGDSVLFGDSNPSNPKPRFGAYWVQGGKVVGAFMEGG 399

Query: 417 NRDDYEALSVVVRRKTKASDMSELERQGLAFA 322
           + D+ +AL+ V + +  A  + EL +QG++FA
Sbjct: 400 SGDENKALAKVAKARPSAESLDELVKQGISFA 431

>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 1 (EC 1.6.5.4) (MDAR 1)
          Length = 441

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = -1

Query: 594 DVDYLAILLLKSLHTVLAVLRGTMSEEVIHYGDFTSNSPR--FGAYWVSKGQITGAFLEG 421
           D DYL     +            + E V+ +GD    SP+  FG YWV  G++ G FLEG
Sbjct: 342 DYDYLPYFYSRFFKLSWEFYGENVGESVL-FGDNDPKSPKPKFGTYWVKDGKVVGVFLEG 400

Query: 420 GNRDDYEALSVVVRRKTKASDMSELERQGLAFA 322
           G +++++A++ V R +     +  L  +GL+FA
Sbjct: 401 GTQEEHKAIAKVARAQPSVESLDVLSEEGLSFA 433

>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 4 (EC 1.6.5.4) (MDAR 4)
          Length = 435

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = -1

Query: 594 DVDYLAILLLKSLHTVLAVLRGTMSEEVIHYGDFTSNSPR--FGAYWVSKGQITGAFLEG 421
           + DYL     ++           + E V+ +GD    SP+  FG+YW+ + ++ GAFLEG
Sbjct: 341 EYDYLPYFYSRAFDLSWQFYGDNVGESVL-FGDNDPESPKPKFGSYWIKERKVVGAFLEG 399

Query: 420 GNRDDYEALSVVVRRKTKASDMSELERQGLAFA 322
           G+ ++  A++ + R +     +  L ++GL+FA
Sbjct: 400 GSPEENNAIAKLARAQPSVESLEVLSKEGLSFA 432

>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)|
           (MDAR fruit) (Ascorbate free radical reductase fruit)
           (AFR reductase fruit) (Fragments)
          Length = 166

 Score = 36.2 bits (82), Expect(2) = 8e-06
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 581 LPFFYSRVFTLSWQFYG 531
           LP+FYSR F L+WQFYG
Sbjct: 100 LPYFYSRTFNLAWQFYG 116



 Score = 32.7 bits (73), Expect(2) = 8e-06
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -1

Query: 504 YGDFTSNS----PRFGAYWVSKGQITGAFLEGGNRDDYEALSV 388
           YGD    +      FG YW+   ++ G FLEGG  D+Y+   V
Sbjct: 115 YGDNVGETVLFPDNFGTYWI---KVVGVFLEGGTPDEYKVARV 154

>CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-1-H)|
          Length = 1234

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 294 QAPLSCFPGWQTLGLVFQVQTCPRPWFYAGQPPTMPRSRPGSHLPGTRP 440
           QA   C PG++TLG +  V+ C    + A  P  + R +P  H PG  P
Sbjct: 47  QATYKCRPGYRTLGTI--VKVCKNGKWVASNPSRICRKKPCGH-PGDTP 92

>HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)|
          Length = 892

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
 Frame = -2

Query: 350 NLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRSPRSVIGTAGSAAGGE 171
           NL+D      +    + C     P+A SP      R G    CR     I   G   G E
Sbjct: 66  NLQDLLSSASASLLAQVCARGRSPAAHSPRVAARWRHGRGSVCRFGPLQIRVCGKRGGAE 125

Query: 170 TR-----DRFAGGWDKLLEGRRKIYCLHTVTW 90
           TR     D  A   D+   GRR  +C H   W
Sbjct: 126 TRPGRGEDGPARQTDRGPGGRRAAHCSHVPPW 157

>YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region|
          Length = 260

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 395 CRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRS 216
           CR ++ +KP+    +   D A + P  +  K  +  G P     PS  + RQGSL  C  
Sbjct: 155 CRLMAAIKPKYTVRMTSCDVASQAPLAQILKGMVPCGSPL----PSCRVSRQGSLSACPW 210

Query: 215 PR 210
           PR
Sbjct: 211 PR 212

>CLPB_LACPL (Q88VX7) Chaperone clpB|
          Length = 867

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
 Frame = -1

Query: 561 SLHTVLAVLRGTMSEEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRD--DYEALSV 388
           S+   +++LRG      IH+G    ++    A  +S   IT  +L     D  D  +  +
Sbjct: 344 SVEDTISILRGLKERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEI 403

Query: 387 VVRRKTKASDMSELERQGLAFAIQES--KKEVPDSGV 283
            V   +  +++ ++ RQ +   ++E+  KKE  D+ V
Sbjct: 404 RVEMNSNPTELDQVNRQLMRLEVEEAALKKETDDASV 440

>CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1353

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 232 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 128
           C   DL+++L VR + PQ +K    L A G N WK
Sbjct: 503 CPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWK 537

>CLPB_NEIMB (Q9JYQ8) Chaperone clpB|
          Length = 859

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = -1

Query: 561 SLHTVLAVLRGTMSEEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRD--DYEALSV 388
           S+   +A+LRG      IH+G   ++     A  +S   IT  FL     D  D  A  V
Sbjct: 342 SVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRV 401

Query: 387 VVRRKTKASDMSELERQGLAFAIQESKKE 301
            + ++TK   M +++R+ +   ++++  E
Sbjct: 402 KMEKETKPEAMDKIDRRLIQLRMEKAHVE 430

>CLPB_NEIMA (Q9JTP9) Chaperone clpB|
          Length = 859

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = -1

Query: 561 SLHTVLAVLRGTMSEEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRD--DYEALSV 388
           S+   +A+LRG      IH+G   ++     A  +S   IT  FL     D  D  A  V
Sbjct: 342 SVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRV 401

Query: 387 VVRRKTKASDMSELERQGLAFAIQESKKE 301
            + ++TK   M +++R+ +   ++++  E
Sbjct: 402 KMEKETKPEAMDKIDRRLIQLRMEKAHVE 430

>COBQ_METTH (O26880) Probable cobyric acid synthase|
          Length = 504

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -1

Query: 423 GGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPDSGVTLG 274
           G + DD +A+ +   R T  SD+  LE  G A  I++  +E+P  G+  G
Sbjct: 286 GDSLDDLDAIIIPGTRNT-ISDLIHLEENGFADEIRDLSREIPVFGICGG 334

>VE2_HPV28 (P50771) Regulatory protein E2|
          Length = 376

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 140 KLLEGRRKIYCLHTVTWRKPCTNLYESVIVASCVNKYRNLIIYCST 3
           +L +G+RK+YC  + TWR  C +  ++  V      Y     + ST
Sbjct: 313 RLHKGKRKLYCKTSSTWRWSCESENQAAFVTIWYTSYSQRNEFLST 358

>NKTR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer cells|
           cyclophilin-related protein) (NK-TR protein)
          Length = 1462

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = -3

Query: 592 RRLPCHS----STQESSHCPGSSTGDNVGRSNSLRRLHKQQPEVRR 467
           R+ P HS    S+  SS    SS+   +    S RR HK++P+V+R
Sbjct: 189 RKKPTHSEGSDSSSNSSSSSESSSESELEHERSRRRKHKRRPKVKR 234

>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1355

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 232 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 128
           C   DL+++L VR + PQ +K    L   G N WK
Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535

>ATPG_BARQU (Q6FYM2) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 303

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -3

Query: 289 RGYPRRKAHLRMVCNG-RGRCGSVDLRVRLLVRQEAPQVVKPG 164
           RG  R   HL +VC   RG CG+ ++++    RQ+   ++  G
Sbjct: 70  RGTGRNDVHLLVVCTAERGLCGAFNMQIARRARQQIKALLSAG 112

>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1) (rCAPS)
          Length = 1289

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 232 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 128
           C   DL+++L VR + PQ +K    L   G N WK
Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535

>OXDA_TRIVR (Q99042) D-amino-acid oxidase (EC 1.4.3.3) (DAMOX) (DAO) (DAAO)|
          Length = 356

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = -1

Query: 579 AILLLKSLHTVLAVLRGTMSEEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRDDYE 400
           A+ LL+  H V  V   T  +  I Y      SP  GA W++       F +GG   DY+
Sbjct: 17  ALQLLRKGHEVTIVSEFTPGDLSIGY-----TSPWAGANWLT-------FYDGGKLADYD 64

Query: 399 ALSVVVRRKTKAS 361
           A+S  + R+   S
Sbjct: 65  AVSYPILRELARS 77

>CLPB_BDEBA (Q6MIV0) Chaperone clpB|
          Length = 855

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
 Frame = -1

Query: 561 SLHTVLAVLRGTMSEEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRD--DYEALSV 388
           S+   + +LRG   +  +H+G   +++    A  +S   IT  FL     D  D  A  +
Sbjct: 338 SVEDAITILRGLKEKYEVHHGIRITDAALVSAVKLSHRYITNRFLPDKAIDLIDEAASKL 397

Query: 387 VVRRKTKASDMSELERQGLAFAIQES--KKEVPDS 289
            +  ++   ++ ++ER+ +   I++   KKE  +S
Sbjct: 398 GIETRSVPEEVDKIERELMQLRIEKEALKKEKDES 432

>VE2_HPV05 (P06921) Regulatory protein E2|
          Length = 514

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 12/138 (8%)
 Frame = -2

Query: 536 YGGQCRKK*FTTATSQATARGSAHTGSVRARSRARSWKVGTGTTTRHCRWLSGVKPR--- 366
           YG +   K   + T Q  +R S H    R+RSR++S    T +TTR  R  S  K R   
Sbjct: 250 YGRRPSSKSRRSQTQQRRSR-SRHRSRSRSRSRSKSQTHTTRSTTR-SRSTSLTKTRALT 307

Query: 365 ---------PRTCLNLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRSP 213
                    P TC   +    R P R++R    ++   + +S      + +      R  
Sbjct: 308 SRSRSRGRSPTTC---RRGGGRSPRRRSRSPSTSSSCTTQRS-----QRARAESSTTRGA 359

Query: 212 RSVIGTAGSAAGGETRDR 159
           R   G+ G + GG  R R
Sbjct: 360 RGSRGSRGGSRGGRGRRR 377


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,978,000
Number of Sequences: 219361
Number of extensions: 2289849
Number of successful extensions: 6671
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6662
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)