ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24n07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY111096.1| Zea mays CL2970_1 mRNA sequence 143 8e-31
2ref|XM_480160.1| Oryza sativa (japonica cultivar-group), mRNA 135 2e-28
3ref|XM_507135.1| PREDICTED Oryza sativa (japonica cultivar-group... 135 2e-28
4dbj|AK104886.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
5dbj|AK069865.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
7dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
8emb|AL357081.26| Human DNA sequence from clone RP11-809I23 on ch... 44 0.55
9gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, co... 42 2.2
10dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome 42 2.2
11gb|AC129066.3| Didelphis virginiana clone LB3-8N21, complete seq... 42 2.2
12gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 42 2.2
13gb|AC016019.4| Drosophila melanogaster clone BACR08P05, complete... 40 8.6
14gb|BC078113.1| Xenopus laevis MGC83626 protein, mRNA (cDNA clone... 40 8.6
15gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosom... 40 8.6
16gb|AC125179.4| Mus musculus BAC clone RP23-321N8 from chromosome... 40 8.6
17gb|AC116748.8| Mus musculus chromosome 9, clone RP23-80L8, compl... 40 8.6
18emb|Z95116.1|HS57G9 Human DNA sequence from clone CTA-57G9 on ch... 40 8.6
19emb|AL592449.8| Human DNA sequence from clone RP11-275G3 on chro... 40 8.6
20gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 40 8.6
21emb|AL590547.3| Human DNA sequence from clone RP11-367A10 on chr... 40 8.6
22gb|AC112509.4| Homo sapiens 3 BAC RP11-428B17 (Roswell Park Canc... 40 8.6
23gb|AC129929.5| Homo sapiens chromosome 11, clone RP5-1075F20, co... 40 8.6
24gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosom... 40 8.6
25gb|AC164436.2| Mus musculus BAC clone RP23-134C5 from chromosome... 40 8.6
26emb|AL645664.8| Mouse DNA sequence from clone RP23-417P22 on chr... 40 8.6
27gb|AC097636.2| Homo sapiens chromosome 3 clone RP11-314A5, compl... 40 8.6
28ref|NM_166403.1| Drosophila melanogaster CG9945-RB, transcript v... 40 8.6
29ref|NM_137650.2| Drosophila melanogaster CG9945-RA, transcript v... 40 8.6
30dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 40 8.6
31dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 8.6
32gb|AC113420.2| Homo sapiens chromosome 5 clone RP11-586E1, compl... 40 8.6
33gb|AC099050.2| Homo sapiens chromosome 3 clone RP11-413B21, comp... 40 8.6
34gb|AY075228.1| Drosophila melanogaster AT18160 full length cDNA 40 8.6
35gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, comp... 40 8.6
36gb|AC009218.7|AC009218 Drosophila melanogaster, chromosome 2R, r... 40 8.6
37gb|AC007837.4|AC007837 Drosophila melanogaster, chromosome 2R, r... 40 8.6
38gb|AC154850.2| Mus musculus BAC clone RP23-36B4 from chromosome ... 40 8.6
39gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 8.6
40gb|AC091012.8| Homo sapiens chromosome 11, clone RP11-113A6, com... 40 8.6
41dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 40 8.6
42gb|AC140200.4| Mus musculus BAC clone RP23-263K2 from 14, comple... 40 8.6
43gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 8.6
44gb|AE003791.5| Drosophila melanogaster chromosome 2R, section 59... 40 8.6
45gb|AY189410.1| Musa x paradisiaca endogenous badnavirus clone OB... 40 8.6
46gb|AC133166.2| Mus musculus BAC clone RP24-186D13 from 1, comple... 40 8.6
47gb|AC002536.1|AC002536 Human Chromosome 11 pac pDJ1075f20, compl... 40 8.6
48emb|AL354710.17| Human DNA sequence from clone RP11-65N13 on chr... 40 8.6 
>gb|AY111096.1| Zea mays CL2970_1 mRNA sequence
          Length = 638

 Score =  143 bits (72), Expect = 8e-31
 Identities = 156/184 (84%)
 Strand = Plus / Plus

                                                                       
Query: 259 tcttgaggatgaaaccagcgatgatgcccagaatacccaccacaatcaagaaggtgattg 318
           ||||||||||| | ||  ||| ||||||||| |  ||||| |||| |||||||||||| |
Sbjct: 314 tcttgaggatgtagccgacgacgatgcccaggaggcccacgacaaacaagaaggtgatgg 373

                                                                       
Query: 319 agaaaccgccattgcttttgctgctctctttgcgtagaacatccagctcttgtctcaact 378
           ||||||||||   | |||||||||||||||| |||||||  ||||||||||| |  || |
Sbjct: 374 agaaaccgccgccggttttgctgctctctttccgtagaagctccagctcttggcgtaatt 433

                                                                       
Query: 379 tttggttttgctgaacagcagacattttctcctcagttagcttggaaatcatggacgttg 438
           | ||||| |||||||||||||||||||||||||||||||||||||| ||||  || ||||
Sbjct: 434 tctggttctgctgaacagcagacattttctcctcagttagcttggagatcacagaagttg 493

               
Query: 439 cctc 442
           ||||
Sbjct: 494 cctc 497
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>ref|XM_480160.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1236

 Score =  135 bits (68), Expect = 2e-28
 Identities = 209/256 (81%)
 Strand = Plus / Minus

                                                                       
Query: 251 ctatgtcttcttgaggatgaaaccagcgatgatgcccagaatacccaccacaatcaagaa 310
           ||||||||||||||||||| | ||  |||||||||| |||| ||| || |    ||||||
Sbjct: 980 ctatgtcttcttgaggatgtagcccacgatgatgccgagaagaccaacgatggccaagaa 921

                                                                       
Query: 311 ggtgattgagaaaccgccattgcttttgctgctctctttgcgtagaacatccagctcttg 370
           |||||  |||||||||||| ||||||||||||| ||||| ||||| |  |||||||| ||
Sbjct: 920 ggtgagggagaaaccgccactgcttttgctgctttctttccgtaggagctccagctcatg 861

                                                                       
Query: 371 tctcaacttttggttttgctgaacagcagacattttctcctcagttagcttggaaatcat 430
           ||  ||||| ||||||||||||| ||||  | | ||||||||| |||| ||||| |||||
Sbjct: 860 tcgtaacttctggttttgctgaatagcaaccctattctcctcatttagtttggagatcat 801

                                                                       
Query: 431 ggacgttgcctctaaagacttatcctttgatagttcaccagatggtctaaatacagattg 490
           ||||| || ||||   | | | ||||||| | ||||| |||||| |||||| |||| |||
Sbjct: 800 ggacgatggctctgtgggcctctcctttgttggttcagcagatgatctaaaaacaggttg 741

                           
Query: 491 tggcattgtagaatta 506
           ||||||||| ||||||
Sbjct: 740 tggcattgttgaatta 725



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 153  acaggcgctccttttaggagggaaaa 178
            ||||| ||||||||||||||||||||
Sbjct: 1084 acaggtgctccttttaggagggaaaa 1059
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>ref|XM_507135.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1177_E11.5 mRNA
          Length = 1327

 Score =  135 bits (68), Expect = 2e-28
 Identities = 209/256 (81%)
 Strand = Plus / Minus

                                                                       
Query: 251 ctatgtcttcttgaggatgaaaccagcgatgatgcccagaatacccaccacaatcaagaa 310
           ||||||||||||||||||| | ||  |||||||||| |||| ||| || |    ||||||
Sbjct: 980 ctatgtcttcttgaggatgtagcccacgatgatgccgagaagaccaacgatggccaagaa 921

                                                                       
Query: 311 ggtgattgagaaaccgccattgcttttgctgctctctttgcgtagaacatccagctcttg 370
           |||||  |||||||||||| ||||||||||||| ||||| ||||| |  |||||||| ||
Sbjct: 920 ggtgagggagaaaccgccactgcttttgctgctttctttccgtaggagctccagctcatg 861

                                                                       
Query: 371 tctcaacttttggttttgctgaacagcagacattttctcctcagttagcttggaaatcat 430
           ||  ||||| ||||||||||||| ||||  | | ||||||||| |||| ||||| |||||
Sbjct: 860 tcgtaacttctggttttgctgaatagcaaccctattctcctcatttagtttggagatcat 801

                                                                       
Query: 431 ggacgttgcctctaaagacttatcctttgatagttcaccagatggtctaaatacagattg 490
           ||||| || ||||   | | | ||||||| | ||||| |||||| |||||| |||| |||
Sbjct: 800 ggacgatggctctgtgggcctctcctttgttggttcagcagatgatctaaaaacaggttg 741

                           
Query: 491 tggcattgtagaatta 506
           ||||||||| ||||||
Sbjct: 740 tggcattgttgaatta 725



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 153  acaggcgctccttttaggagggaaaa 178
            ||||| ||||||||||||||||||||
Sbjct: 1084 acaggtgctccttttaggagggaaaa 1059
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>dbj|AK104886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A07, full
           insert sequence
          Length = 1240

 Score =  135 bits (68), Expect = 2e-28
 Identities = 209/256 (81%)
 Strand = Plus / Minus

                                                                       
Query: 251 ctatgtcttcttgaggatgaaaccagcgatgatgcccagaatacccaccacaatcaagaa 310
           ||||||||||||||||||| | ||  |||||||||| |||| ||| || |    ||||||
Sbjct: 980 ctatgtcttcttgaggatgtagcccacgatgatgccgagaagaccaacgatggccaagaa 921

                                                                       
Query: 311 ggtgattgagaaaccgccattgcttttgctgctctctttgcgtagaacatccagctcttg 370
           |||||  |||||||||||| ||||||||||||| ||||| ||||| |  |||||||| ||
Sbjct: 920 ggtgagggagaaaccgccactgcttttgctgctttctttccgtaggagctccagctcatg 861

                                                                       
Query: 371 tctcaacttttggttttgctgaacagcagacattttctcctcagttagcttggaaatcat 430
           ||  ||||| ||||||||||||| ||||  | | ||||||||| |||| ||||| |||||
Sbjct: 860 tcgtaacttctggttttgctgaatagcaaccctattctcctcatttagtttggagatcat 801

                                                                       
Query: 431 ggacgttgcctctaaagacttatcctttgatagttcaccagatggtctaaatacagattg 490
           ||||| || ||||   | | | ||||||| | ||||| |||||| |||||| |||| |||
Sbjct: 800 ggacgatggctctgtgggcctctcctttgttggttcagcagatgatctaaaaacaggttg 741

                           
Query: 491 tggcattgtagaatta 506
           ||||||||| ||||||
Sbjct: 740 tggcattgttgaatta 725



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 153  acaggcgctccttttaggagggaaaa 178
            ||||| ||||||||||||||||||||
Sbjct: 1084 acaggtgctccttttaggagggaaaa 1059
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>dbj|AK069865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037M15, full
           insert sequence
          Length = 1329

 Score =  135 bits (68), Expect = 2e-28
 Identities = 209/256 (81%)
 Strand = Plus / Minus

                                                                       
Query: 251 ctatgtcttcttgaggatgaaaccagcgatgatgcccagaatacccaccacaatcaagaa 310
           ||||||||||||||||||| | ||  |||||||||| |||| ||| || |    ||||||
Sbjct: 980 ctatgtcttcttgaggatgtagcccacgatgatgccgagaagaccaacgatggccaagaa 921

                                                                       
Query: 311 ggtgattgagaaaccgccattgcttttgctgctctctttgcgtagaacatccagctcttg 370
           |||||  |||||||||||| ||||||||||||| ||||| ||||| |  |||||||| ||
Sbjct: 920 ggtgagggagaaaccgccactgcttttgctgctttctttccgtaggagctccagctcatg 861

                                                                       
Query: 371 tctcaacttttggttttgctgaacagcagacattttctcctcagttagcttggaaatcat 430
           ||  ||||| ||||||||||||| ||||  | | ||||||||| |||| ||||| |||||
Sbjct: 860 tcgtaacttctggttttgctgaatagcaaccctattctcctcatttagtttggagatcat 801

                                                                       
Query: 431 ggacgttgcctctaaagacttatcctttgatagttcaccagatggtctaaatacagattg 490
           ||||| || ||||   | | | ||||||| | ||||| |||||| |||||| |||| |||
Sbjct: 800 ggacgatggctctgtgggcctctcctttgttggttcagcagatgatctaaaaacaggttg 741

                           
Query: 491 tggcattgtagaatta 506
           ||||||||| ||||||
Sbjct: 740 tggcattgttgaatta 725



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 153  acaggcgctccttttaggagggaaaa 178
            ||||| ||||||||||||||||||||
Sbjct: 1084 acaggtgctccttttaggagggaaaa 1059
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 88/105 (83%)
 Strand = Plus / Minus

                                                                           
Query: 251     ctatgtcttcttgaggatgaaaccagcgatgatgcccagaatacccaccacaatcaagaa 310
               ||||||||||||||||||| | ||  |||||||||| |||| ||| || |    ||||||
Sbjct: 3168742 ctatgtcttcttgaggatgtagcccacgatgatgccgagaagaccaacgatggccaagaa 3168683

                                                            
Query: 311     ggtgattgagaaaccgccattgcttttgctgctctctttgcgtag 355
               |||||  |||||||||||| ||||||||||||| ||||| |||||
Sbjct: 3168682 ggtgagggagaaaccgccactgcttttgctgctttctttccgtag 3168638



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                           
Query: 361     ccagctcttgtctcaacttttggttttgctgaacagcagacattttctcctcagttagct 420
               ||||||| ||||  ||||| ||||||||||||| ||||  | | ||||||||| |||| |
Sbjct: 3168175 ccagctcatgtcgtaacttctggttttgctgaatagcaaccctattctcctcatttagtt 3168116

                              
Query: 421     tggaaatcatggacg 435
               |||| ||||||||||
Sbjct: 3168115 tggagatcatggacg 3168101



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 153     acaggcgctccttttaggagggaaaa 178
               ||||| ||||||||||||||||||||
Sbjct: 3168846 acaggtgctccttttaggagggaaaa 3168821
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>dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1177_E11
          Length = 92375

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 88/105 (83%)
 Strand = Plus / Minus

                                                                         
Query: 251   ctatgtcttcttgaggatgaaaccagcgatgatgcccagaatacccaccacaatcaagaa 310
             ||||||||||||||||||| | ||  |||||||||| |||| ||| || |    ||||||
Sbjct: 24822 ctatgtcttcttgaggatgtagcccacgatgatgccgagaagaccaacgatggccaagaa 24763

                                                          
Query: 311   ggtgattgagaaaccgccattgcttttgctgctctctttgcgtag 355
             |||||  |||||||||||| ||||||||||||| ||||| |||||
Sbjct: 24762 ggtgagggagaaaccgccactgcttttgctgctttctttccgtag 24718



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                         
Query: 361   ccagctcttgtctcaacttttggttttgctgaacagcagacattttctcctcagttagct 420
             ||||||| ||||  ||||| ||||||||||||| ||||  | | ||||||||| |||| |
Sbjct: 24255 ccagctcatgtcgtaacttctggttttgctgaatagcaaccctattctcctcatttagtt 24196

                            
Query: 421   tggaaatcatggacg 435
             |||| ||||||||||
Sbjct: 24195 tggagatcatggacg 24181



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 153   acaggcgctccttttaggagggaaaa 178
             ||||| ||||||||||||||||||||
Sbjct: 24926 acaggtgctccttttaggagggaaaa 24901
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>emb|AL357081.26| Human DNA sequence from clone RP11-809I23 on chromosome 6 Contains the
             5' end of the gene for synaptic nuclei expressed 1b
             (SYNE-1) (nesprin-1 beta, MYNE1, SYNE1, KIAA0796) and part
             of a novel gene, complete sequence
          Length = 70885

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 41    tgttaaggattaattaattaaa 62
             ||||||||||||||||||||||
Sbjct: 39433 tgttaaggattaattaattaaa 39412
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>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome
          Length = 706569

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    aatagaacaggcgctcctttt 167
              |||||||||||||||||||||
Sbjct: 439849 aatagaacaggcgctcctttt 439829
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>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 147    aatagaacaggcgctcctttt 167
              |||||||||||||||||||||
Sbjct: 338065 aatagaacaggcgctcctttt 338085
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>gb|AC129066.3| Didelphis virginiana clone LB3-8N21, complete sequence
          Length = 158526

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 329   attgcttttgctgctctcttt 349
             |||||||||||||||||||||
Sbjct: 61542 attgcttttgctgctctcttt 61562
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>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 329     attgcttttgctgctctcttt 349
               |||||||||||||||||||||
Sbjct: 1424401 attgcttttgctgctctcttt 1424421
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>gb|AC016019.4| Drosophila melanogaster clone BACR08P05, complete sequence
          Length = 192157

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 549    tgattcttcagacaacgagctggg 572
              ||||||||| ||||||||||||||
Sbjct: 158894 tgattcttcggacaacgagctggg 158871
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>gb|BC078113.1| Xenopus laevis MGC83626 protein, mRNA (cDNA clone MGC:83626
            IMAGE:5084468), complete cds
          Length = 4073

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 27   acataacttgcagctgttaa 46
            ||||||||||||||||||||
Sbjct: 2962 acataacttgcagctgttaa 2943
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>gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosome 1, complete sequence
          Length = 221754

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   gttctgattcttcagacaac 564
             ||||||||||||||||||||
Sbjct: 44025 gttctgattcttcagacaac 44006
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>gb|AC125179.4| Mus musculus BAC clone RP23-321N8 from chromosome 16, complete sequence
          Length = 193474

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 77     tgtgattaaaatcacggaaaaccaccatgtaa 108
              ||||||||||||||| ||| | ||||||||||
Sbjct: 157412 tgtgattaaaatcaccgaagaacaccatgtaa 157443
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>gb|AC116748.8| Mus musculus chromosome 9, clone RP23-80L8, complete sequence
          Length = 268886

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    ctttcctgggaatgtgacac 229
              ||||||||||||||||||||
Sbjct: 221091 ctttcctgggaatgtgacac 221110
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>emb|Z95116.1|HS57G9 Human DNA sequence from clone CTA-57G9 on chromosome 22q12.1, complete
             sequence
          Length = 113872

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   tcaacttttggttttgctga 392
             ||||||||||||||||||||
Sbjct: 44396 tcaacttttggttttgctga 44377
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>emb|AL592449.8| Human DNA sequence from clone RP11-275G3 on chromosome 1 Contains two
             novel genes (FLJ12505 FLJ39286) (FLJ12793 FLJ36628) and a
             CpG island, complete sequence
          Length = 111783

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   tcaacttttggttttgctga 392
             ||||||||||||||||||||
Sbjct: 10785 tcaacttttggttttgctga 10804
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   accacaatcaagaaggtgat 316
             ||||||||||||||||||||
Sbjct: 33202 accacaatcaagaaggtgat 33221
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>emb|AL590547.3| Human DNA sequence from clone RP11-367A10 on chromosome 1 Contains part
             of the gene for a novel protein (MGC27277), complete
             sequence
          Length = 61119

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   tcaacttttggttttgctga 392
             ||||||||||||||||||||
Sbjct: 15621 tcaacttttggttttgctga 15602
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>gb|AC112509.4| Homo sapiens 3 BAC RP11-428B17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 110001

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   tctcaacttttggttttgct 390
             ||||||||||||||||||||
Sbjct: 19373 tctcaacttttggttttgct 19392
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>gb|AC129929.5| Homo sapiens chromosome 11, clone RP5-1075F20, complete sequence
          Length = 141449

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 77    tgtgattaaaatcacggaaaacca 100
             |||||||||||||| |||||||||
Sbjct: 93366 tgtgattaaaatcatggaaaacca 93389
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>gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosome 16, complete
             sequence
          Length = 217725

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 77    tgtgattaaaatcacggaaaaccaccatgtaa 108
             ||||||||||||||| ||| | ||||||||||
Sbjct: 18432 tgtgattaaaatcaccgaagaacaccatgtaa 18463
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>gb|AC164436.2| Mus musculus BAC clone RP23-134C5 from chromosome 14, complete sequence
          Length = 220260

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   tcaacttttggttttgctga 392
             ||||||||||||||||||||
Sbjct: 70048 tcaacttttggttttgctga 70029
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>emb|AL645664.8| Mouse DNA sequence from clone RP23-417P22 on chromosome 13 Contains the
             5' end of the Gmds gene for GDP-mannose 4, 6-dehydratase,
             the 3' end of a novel gene and a CpG island, complete
             sequence
          Length = 193914

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 576   agatgttggcacataaatta 595
             ||||||||||||||||||||
Sbjct: 57212 agatgttggcacataaatta 57231
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>gb|AC097636.2| Homo sapiens chromosome 3 clone RP11-314A5, complete sequence
          Length = 214687

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  tcaacttttggttttgctga 392
            ||||||||||||||||||||
Sbjct: 2344 tcaacttttggttttgctga 2363
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>ref|NM_166403.1| Drosophila melanogaster CG9945-RB, transcript variant B (CG9945),
           mRNA
          Length = 2075

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 549 tgattcttcagacaacgagctggg 572
           ||||||||| ||||||||||||||
Sbjct: 257 tgattcttcggacaacgagctggg 280
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>ref|NM_137650.2| Drosophila melanogaster CG9945-RA, transcript variant A (CG9945),
           mRNA
          Length = 1996

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 549 tgattcttcagacaacgagctggg 572
           ||||||||| ||||||||||||||
Sbjct: 257 tgattcttcggacaacgagctggg 280
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    ttatcctttgatagttcacc 469
              ||||||||||||||||||||
Sbjct: 156106 ttatcctttgatagttcacc 156087
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 297     accacaatcaagaaggtgat 316
               ||||||||||||||||||||
Sbjct: 1102819 accacaatcaagaaggtgat 1102800
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>gb|AC113420.2| Homo sapiens chromosome 5 clone RP11-586E1, complete sequence
          Length = 176267

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 452  atcctttgatagttcaccagatggtcta 479
            |||||||||||| |||||| ||||||||
Sbjct: 3725 atcctttgataggtcaccacatggtcta 3698
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>gb|AC099050.2| Homo sapiens chromosome 3 clone RP11-413B21, complete sequence
          Length = 174036

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    tcaacttttggttttgctga 392
              ||||||||||||||||||||
Sbjct: 161821 tcaacttttggttttgctga 161840
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>gb|AY075228.1| Drosophila melanogaster AT18160 full length cDNA
          Length = 1949

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 549 tgattcttcagacaacgagctggg 572
           ||||||||| ||||||||||||||
Sbjct: 257 tgattcttcggacaacgagctggg 280
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>gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, complete sequence
          Length = 184635

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 452    atcctttgatagttcaccagatggtcta 479
              |||||||||||| |||||| ||||||||
Sbjct: 129860 atcctttgataggtcaccacatggtcta 129833
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>gb|AC009218.7|AC009218 Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone
             BACR33D17, complete sequence
          Length = 156753

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 549   tgattcttcagacaacgagctggg 572
             ||||||||| ||||||||||||||
Sbjct: 61800 tgattcttcggacaacgagctggg 61823
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>gb|AC007837.4|AC007837 Drosophila melanogaster, chromosome 2R, region 57B2-B3, BAC clone
             BACR04I07, complete sequence
          Length = 123647

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 549   tgattcttcagacaacgagctggg 572
             ||||||||| ||||||||||||||
Sbjct: 28694 tgattcttcggacaacgagctggg 28717
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>gb|AC154850.2| Mus musculus BAC clone RP23-36B4 from chromosome 9, complete sequence
          Length = 247708

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   ctttcctgggaatgtgacac 229
             ||||||||||||||||||||
Sbjct: 24411 ctttcctgggaatgtgacac 24430
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 277     cgatgatgcccagaataccc 296
               ||||||||||||||||||||
Sbjct: 2202372 cgatgatgcccagaataccc 2202391
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>gb|AC091012.8| Homo sapiens chromosome 11, clone RP11-113A6, complete sequence
          Length = 145042

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 77   tgtgattaaaatcacggaaaacca 100
            |||||||||||||| |||||||||
Sbjct: 9564 tgtgattaaaatcatggaaaacca 9541
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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 376     acttttggttttgctgaaca 395
               ||||||||||||||||||||
Sbjct: 1873449 acttttggttttgctgaaca 1873468
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>gb|AC140200.4| Mus musculus BAC clone RP23-263K2 from 14, complete sequence
          Length = 168635

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   tcaacttttggttttgctga 392
             ||||||||||||||||||||
Sbjct: 38380 tcaacttttggttttgctga 38399
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 266     gatgaaaccagcgatgatgc 285
               ||||||||||||||||||||
Sbjct: 2503769 gatgaaaccagcgatgatgc 2503750
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>gb|AE003791.5| Drosophila melanogaster chromosome 2R, section 59 of 73 of the complete
              sequence
          Length = 263535

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 549    tgattcttcagacaacgagctggg 572
              ||||||||| ||||||||||||||
Sbjct: 104642 tgattcttcggacaacgagctggg 104665
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>gb|AY189410.1| Musa x paradisiaca endogenous badnavirus clone OBLE36 ORFIII-like
           polyprotein gene, partial cds
          Length = 544

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 aatcaagaaggtgattgaga 321
           ||||||||||||||||||||
Sbjct: 265 aatcaagaaggtgattgaga 284
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>gb|AC133166.2| Mus musculus BAC clone RP24-186D13 from 1, complete sequence
          Length = 158206

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 545    gttctgattcttcagacaac 564
              ||||||||||||||||||||
Sbjct: 119745 gttctgattcttcagacaac 119726
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>gb|AC002536.1|AC002536 Human Chromosome 11 pac pDJ1075f20, complete sequence
          Length = 140977

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 77    tgtgattaaaatcacggaaaacca 100
             |||||||||||||| |||||||||
Sbjct: 47604 tgtgattaaaatcatggaaaacca 47581
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>emb|AL354710.17| Human DNA sequence from clone RP11-65N13 on chromosome 9, complete
              sequence
          Length = 131708

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 383    gttttgctgaacagcagacatttt 406
              ||||||||||| ||||||||||||
Sbjct: 105973 gttttgctgaaaagcagacatttt 105950


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,499,641
Number of Sequences: 3902068
Number of extensions: 6499641
Number of successful extensions: 134281
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133947
Number of HSP's gapped (non-prelim): 324
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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