>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = -1

Query: 205 KGAQQGXLPVPEGCTDQNAXNYDPTARSDDGSCLYTF 95
           KGAQQG LPVPEGCTDQNA NYDPTARSDDGSCLYTF
Sbjct: 428 KGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = -1

Query: 205 KGAQQGXLPVPEGCTDQNAXNYDPTARSDDGSCLYTF 95
           KGAQQ  LPVPEGCTD  A N+DPTARSDDG+C+Y F
Sbjct: 438 KGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = -1

Query: 214 GXKKGAQQGXLPVPEGCTDQNAXNYDPTARSDDGSCLYTF 95
           G +   Q G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = -1

Query: 205 KGAQQGXLPVPEGCTDQNAXNYDPTARSDDGSCLY 101
           K AQQ  LPV +GCTD  A NYDPTARSDDGSC Y
Sbjct: 436 KAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>PURQ_RHILO (Q98NN0) Phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3)|
           (FGAM synthase I)
          Length = 222

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +2

Query: 38  WMRCGLR*VKHXILKVACLKGVKAAAVVAPCRWVVVL---GILVGATFRHGQXTLLC 199
           ++RCG    +  +++    K  K   V+  C    +L   G+L GA  R+     +C
Sbjct: 56  YLRCGAIAARMPVMRAVAEKAAKGVTVIGVCNGFQILVEAGLLPGALMRNTSLKFVC 112


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,465,963
Number of Sequences: 219361
Number of extensions: 382366
Number of successful extensions: 731
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)