ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags24m24 |
|---|---|
| Clone Library Name | barley_pub |
>PMGI_MAIZE (P30792) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) Length = 559 Score = 81.3 bits (199), Expect = 6e-16 Identities = 38/44 (86%), Positives = 41/44 (93%) Frame = -1 Query: 308 LHPGVRFRSDIQTHGLANVAATVMNLHGFQAPADYETTLIEVVD 177 LHPGV+FR+DIQT GLANVAATVMNLHGF+APADYE TLIEV D Sbjct: 515 LHPGVKFRNDIQTPGLANVAATVMNLHGFEAPADYEQTLIEVAD 558
>PMGI_RICCO (P35493) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) Length = 556 Score = 76.3 bits (186), Expect = 2e-14 Identities = 37/44 (84%), Positives = 39/44 (88%) Frame = -1 Query: 308 LHPGVRFRSDIQTHGLANVAATVMNLHGFQAPADYETTLIEVVD 177 L PGVRFRSDI T GLANVAATVMNLHGF+AP+DYE TLIE VD Sbjct: 512 LTPGVRFRSDIPTGGLANVAATVMNLHGFEAPSDYEPTLIEAVD 555
>PMGI_PRUDU (O24246) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) (Fragment) Length = 488 Score = 75.9 bits (185), Expect = 2e-14 Identities = 36/44 (81%), Positives = 39/44 (88%) Frame = -1 Query: 308 LHPGVRFRSDIQTHGLANVAATVMNLHGFQAPADYETTLIEVVD 177 L PGV+FR D+ GLANVAATVMNLHGF+APADYETTLIEVVD Sbjct: 444 LAPGVQFRKDVPNGGLANVAATVMNLHGFEAPADYETTLIEVVD 487
>PMG2_ARATH (Q9M9K1) Probable 2,3-bisphosphoglycerate-independent| phosphoglycerate mutase 2 (EC 5.4.2.1) (Phosphoglyceromutase 2) (BPG-independent PGAM 2) (PGAM-I 2) Length = 560 Score = 74.3 bits (181), Expect = 7e-14 Identities = 36/45 (80%), Positives = 40/45 (88%) Frame = -1 Query: 308 LHPGVRFRSDIQTHGLANVAATVMNLHGFQAPADYETTLIEVVDK 174 L GVRFR DI+T GLANVAATVMNLHGF AP+DYET+LIEVV+K Sbjct: 516 LSAGVRFRQDIETPGLANVAATVMNLHGFVAPSDYETSLIEVVEK 560
>PMGI_MESCR (Q42908) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) Length = 559 Score = 74.3 bits (181), Expect = 7e-14 Identities = 36/43 (83%), Positives = 39/43 (90%) Frame = -1 Query: 308 LHPGVRFRSDIQTHGLANVAATVMNLHGFQAPADYETTLIEVV 180 L PGVRFR+DI T GLANVAATVMNLHGF+AP+DYE TLIEVV Sbjct: 515 LTPGVRFRNDIPTGGLANVAATVMNLHGFEAPSDYEPTLIEVV 557
>PMG1_ARATH (O04499) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase 1 (EC 5.4.2.1) (Phosphoglyceromutase 1) (BPG-independent PGAM 1) (PGAM-I 1) Length = 557 Score = 70.5 bits (171), Expect = 1e-12 Identities = 34/44 (77%), Positives = 38/44 (86%) Frame = -1 Query: 308 LHPGVRFRSDIQTHGLANVAATVMNLHGFQAPADYETTLIEVVD 177 L GVRFR D++T GLANVAATVMNLHGF AP+DYE TLIEVV+ Sbjct: 514 LAQGVRFRKDLETPGLANVAATVMNLHGFVAPSDYEPTLIEVVE 557
>PMGI_TOBAC (P35494) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) Length = 559 Score = 68.9 bits (167), Expect = 3e-12 Identities = 33/44 (75%), Positives = 37/44 (84%) Frame = -1 Query: 308 LHPGVRFRSDIQTHGLANVAATVMNLHGFQAPADYETTLIEVVD 177 L PGVRFR D+ T GLANVAAT MNLHG +AP+DYE +LIEVVD Sbjct: 515 LAPGVRFRQDLPTGGLANVAATFMNLHGSEAPSDYEPSLIEVVD 558
>GPMI_LEPIN (P59173) Probable 2,3-bisphosphoglycerate-independent| phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (iPGM) Length = 552 Score = 40.0 bits (92), Expect = 0.001 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = -1 Query: 296 VRFRSDIQTHGLANVAATVMNLHGFQAPADYETTLIE 186 +RF S + GLANVAAT++++ G++ P Y +LI+ Sbjct: 513 IRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLIQ 549
>GPMI_LEPIC (Q72VB8) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (iPGM) Length = 552 Score = 40.0 bits (92), Expect = 0.001 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = -1 Query: 296 VRFRSDIQTHGLANVAATVMNLHGFQAPADYETTLIE 186 +RF S + GLANVAAT++++ G++ P Y +LI+ Sbjct: 513 IRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLIQ 549
>SGCC_ECOLI (P39365) Putative permease IIC component (Putative PTS system EIIC| component) Length = 437 Score = 31.2 bits (69), Expect = 0.69 Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Frame = +3 Query: 150 SESAVVFLLVDD-FDEGRLVIGRSLEAMEVHHRGGNVGEPVCLDV 281 S S +F+L+D +++ + GR+++A E+ R G VG+PV + V Sbjct: 181 SSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVGDPVIIGV 225
>YOPB_YERPS (Q06114) Protein yopB| Length = 401 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 137 GSQFCRYSFGVGQGMIASLNNLRFASTLAQNSCVTLRKVD 18 GSQ + + GVG G+ ++NN + A N+ + L K D Sbjct: 312 GSQATQVAVGVGSGITQTINNKKQADLQHNNADLALNKAD 351
>YOPB_YEREN (P37131) Protein yopB| Length = 401 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 137 GSQFCRYSFGVGQGMIASLNNLRFASTLAQNSCVTLRKVD 18 GSQ + + GVG G+ ++NN + A N+ + L K D Sbjct: 312 GSQATQVAVGVGSGITQTINNKKQADLQHNNADLALNKAD 351
>NPL4_YEAST (P33755) Protein NPL4| Length = 580 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -3 Query: 288 PL*HPDTRARQRCRHGDEPPWLPGSC 211 PL PD R +RC +G E PW G C Sbjct: 192 PLSEPDFRINKRCHNGHE-PWPRGIC 216
>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)| (Nepenthesin-I) Length = 437 Score = 28.1 bits (61), Expect = 5.9 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 158 AL*SQNCGSQFCRYSFGVGQG 96 AL S C + FC+Y++G G G Sbjct: 157 ALSSPTCSNNFCQYTYGYGDG 177
>MBF1_KLULA (Q6CIP4) Multiprotein-bridging factor 1| Length = 150 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 5/37 (13%) Frame = +3 Query: 174 LVDDFDEGR-----LVIGRSLEAMEVHHRGGNVGEPV 269 +V+D++ GR ++G+ A+ + RG N+GEP+ Sbjct: 109 IVNDYESGRGIPNQQILGKMERALGIKLRGKNIGEPL 145
>MBF1_DEBHA (Q6BXQ8) Multiprotein-bridging factor 1| Length = 150 Score = 27.3 bits (59), Expect = 10.0 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 5/37 (13%) Frame = +3 Query: 174 LVDDFDEGRLV-----IGRSLEAMEVHHRGGNVGEPV 269 +++D++ GR V +G+ A+ V RG N+GEP+ Sbjct: 109 VINDYEAGRAVPNQQLLGKLERALGVKLRGKNIGEPL 145 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,112,160 Number of Sequences: 219361 Number of extensions: 789718 Number of successful extensions: 2096 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2080 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2096 length of database: 80,573,946 effective HSP length: 78 effective length of database: 63,463,788 effective search space used: 1523130912 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
