ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25b19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
2dbj|AK106147.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
3dbj|AK061722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
4dbj|AB062681.1| Oryza sativa (japonica cultivar-group) mRNA for ... 250 4e-63
5gb|AY111916.1| Zea mays CL4656_1 mRNA sequence 216 6e-53
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
7dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
8dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
9gb|DQ428312.1| Sorghum bicolor voucher NSL87666 locus PRC0343 ge... 64 5e-07
10gb|DQ428305.1| Sorghum bicolor voucher NSL51030 locus PRC0343 ge... 64 5e-07
11dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
12gb|DQ428320.1| Sorghum propinquum locus PRC0343 genomic sequence 58 3e-05
13gb|DQ428319.1| Sorghum bicolor voucher PI585454 locus PRC0343 ge... 58 3e-05
14gb|DQ428318.1| Sorghum bicolor voucher PI267539 locus PRC0343 ge... 58 3e-05
15gb|DQ428317.1| Sorghum bicolor voucher PI267408 locus PRC0343 ge... 58 3e-05
16gb|DQ428316.1| Sorghum bicolor voucher PI221607 locus PRC0343 ge... 58 3e-05
17gb|DQ428315.1| Sorghum bicolor voucher PI152702 locus PRC0343 ge... 58 3e-05
18gb|DQ428314.1| Sorghum bicolor voucher NSL92371 locus PRC0343 ge... 58 3e-05
19gb|DQ428313.1| Sorghum bicolor voucher NSL87902 locus PRC0343 ge... 58 3e-05
20gb|DQ428311.1| Sorghum bicolor voucher NSL77217 locus PRC0343 ge... 58 3e-05
21gb|DQ428310.1| Sorghum bicolor voucher NSL77034 locus PRC0343 ge... 58 3e-05
22gb|DQ428309.1| Sorghum bicolor voucher NSL56174 locus PRC0343 ge... 58 3e-05
23gb|DQ428308.1| Sorghum bicolor voucher NSL56003 locus PRC0343 ge... 58 3e-05
24gb|DQ428307.1| Sorghum bicolor voucher NSL55243 locus PRC0343 ge... 58 3e-05
25gb|DQ428306.1| Sorghum bicolor voucher NSL51365 locus PRC0343 ge... 58 3e-05
26gb|DQ428304.1| Sorghum bicolor voucher NSL50875 locus PRC0343 ge... 58 3e-05
27gb|DQ428303.1| Sorghum bicolor voucher BTx623 locus PRC0343 geno... 58 3e-05
28dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.030
29dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.030
30gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosom... 46 0.12
31gb|AC137735.5| Homo sapiens chromosome 17, clone CTD-2582D11, co... 46 0.12
32dbj|AP004503.1| Lotus japonicus genomic DNA, chromosome 5, clone... 46 0.12
33ref|XM_469009.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.46
34gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genom... 44 0.46
35gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.46
36gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genom... 44 0.46
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
38gb|AC140334.3| Mus musculus BAC clone RP23-244J7 from chromosome... 44 0.46
39dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
40dbj|AK108094.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.46
41dbj|AK063184.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.46
42gb|AC163709.3| Gallus gallus BAC clone CH261-60F22 from chromoso... 44 0.46
43emb|AL354743.33| Human DNA sequence from clone RP4-785P20 on chr... 42 1.8
44gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Can... 42 1.8
45gb|AC117376.3| Homo sapiens 12 BAC RP11-349K16 (Roswell Park Can... 42 1.8
46gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
47gb|AC140232.2| Mus musculus BAC clone RP24-498F17 from chromosom... 40 7.2
48gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
49emb|CR450706.7| Zebrafish DNA sequence from clone CH211-14K11 in... 40 7.2
50ref|XM_741110.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.2
51ref|XM_501190.1| Yarrowia lipolytica CLIB122, YALI0B21626g predi... 40 7.2
52emb|AL136100.12| Human DNA sequence from clone RP11-534P19 on ch... 40 7.2
53gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cance... 40 7.2
54dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
55dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
56gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genom... 40 7.2
57dbj|AP005585.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
58dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
59gb|AC005323.1|AC005323 Homo sapiens chromosome 17, clone hRPK.79... 40 7.2
60gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
61gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complet... 40 7.2
62emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 7.2
63emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 7.2
64emb|AL837522.8| Mouse DNA sequence from clone RP23-264L10 on chr... 40 7.2
65emb|AL645468.11| Mouse DNA sequence from clone RP23-246F18 on ch... 40 7.2
66emb|AL662835.11| Mouse DNA sequence from clone RP23-458A23 on ch... 40 7.2 
>dbj|AK121892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105C15, full
            insert sequence
          Length = 1392

 Score =  250 bits (126), Expect = 4e-63
 Identities = 264/310 (85%)
 Strand = Plus / Minus

                                                                        
Query: 224  atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 283
            ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| |
Sbjct: 1026 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 967

                                                                        
Query: 284  atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 343
            |||||||||| || || || || || |||||||||||||||||||||||||| || || |
Sbjct: 966  atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 907

                                                                        
Query: 344  cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgcgatgaacg 403
            | || || || ||||| ||||| |||||||| ||||| || ||||||||||| ||||| |
Sbjct: 906  cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgctatgaatg 847

                                                                        
Query: 404  agttcccgtagaactttatggtgctgttgccatgctcagtctcgacggtttcctttccta 463
            | |||||| ||||  |||| ||||| |  |||||||||||||| ||||||||| ||||||
Sbjct: 846  aattcccgaagaatgttatagtgctttcaccatgctcagtctcaacggtttcccttccta 787

                                                                        
Query: 464  tccggttagaagcaacaaggggaaccaagttagcgccggcatggccttgcatgacacgct 523
            ||| ||||||||||||||||||||||| |||||| || ||||| ||||||||||| ||||
Sbjct: 786  tcctgttagaagcaacaaggggaaccaggttagcaccagcatgtccttgcatgacgcgct 727

                      
Query: 524  tccagtgttc 533
            ||||||||||
Sbjct: 726  tccagtgttc 717
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>dbj|AK106147.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H04, full
           insert sequence
          Length = 1249

 Score =  250 bits (126), Expect = 4e-63
 Identities = 264/310 (85%)
 Strand = Plus / Minus

                                                                       
Query: 224 atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 283
           ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| |
Sbjct: 977 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 918

                                                                       
Query: 284 atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 343
           |||||||||| || || || || || |||||||||||||||||||||||||| || || |
Sbjct: 917 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 858

                                                                       
Query: 344 cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgcgatgaacg 403
           | || || || ||||| ||||| |||||||| ||||| || ||||||||||| ||||| |
Sbjct: 857 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgctatgaatg 798

                                                                       
Query: 404 agttcccgtagaactttatggtgctgttgccatgctcagtctcgacggtttcctttccta 463
           | |||||| ||||  |||| ||||| |  |||||||||||||| ||||||||| ||||||
Sbjct: 797 aattcccgaagaatgttatagtgctttcaccatgctcagtctcaacggtttcccttccta 738

                                                                       
Query: 464 tccggttagaagcaacaaggggaaccaagttagcgccggcatggccttgcatgacacgct 523
           ||| ||||||||||||||||||||||| |||||| || ||||| ||||||||||| ||||
Sbjct: 737 tcctgttagaagcaacaaggggaaccaggttagcaccagcatgtccttgcatgacgcgct 678

                     
Query: 524 tccagtgttc 533
           ||||||||||
Sbjct: 677 tccagtgttc 668
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>dbj|AK061722.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A03, full
           insert sequence
          Length = 1249

 Score =  250 bits (126), Expect = 4e-63
 Identities = 264/310 (85%)
 Strand = Plus / Minus

                                                                       
Query: 224 atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 283
           ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| |
Sbjct: 977 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 918

                                                                       
Query: 284 atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 343
           |||||||||| || || || || || |||||||||||||||||||||||||| || || |
Sbjct: 917 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 858

                                                                       
Query: 344 cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgcgatgaacg 403
           | || || || ||||| ||||| |||||||| ||||| || ||||||||||| ||||| |
Sbjct: 857 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgctatgaatg 798

                                                                       
Query: 404 agttcccgtagaactttatggtgctgttgccatgctcagtctcgacggtttcctttccta 463
           | |||||| ||||  |||| ||||| |  |||||||||||||| ||||||||| ||||||
Sbjct: 797 aattcccgaagaatgttatagtgctttcaccatgctcagtctcaacggtttcccttccta 738

                                                                       
Query: 464 tccggttagaagcaacaaggggaaccaagttagcgccggcatggccttgcatgacacgct 523
           ||| ||||||||||||||||||||||| |||||| || ||||| ||||||||||| ||||
Sbjct: 737 tcctgttagaagcaacaaggggaaccaggttagcaccagcatgtccttgcatgacgcgct 678

                     
Query: 524 tccagtgttc 533
           ||||||||||
Sbjct: 677 tccagtgttc 668
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>dbj|AB062681.1| Oryza sativa (japonica cultivar-group) mRNA for putative hydrolase,
           complete cds
          Length = 1219

 Score =  250 bits (126), Expect = 4e-63
 Identities = 264/310 (85%)
 Strand = Plus / Minus

                                                                       
Query: 224 atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 283
           ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| |
Sbjct: 957 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 898

                                                                       
Query: 284 atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 343
           |||||||||| || || || || || |||||||||||||||||||||||||| || || |
Sbjct: 897 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 838

                                                                       
Query: 344 cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgcgatgaacg 403
           | || || || ||||| ||||| |||||||| ||||| || ||||||||||| ||||| |
Sbjct: 837 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgctatgaatg 778

                                                                       
Query: 404 agttcccgtagaactttatggtgctgttgccatgctcagtctcgacggtttcctttccta 463
           | |||||| ||||  |||| ||||| |  |||||||||||||| ||||||||| ||||||
Sbjct: 777 aattcccgaagaatgttatagtgctttcaccatgctcagtctcaacggtttcccttccta 718

                                                                       
Query: 464 tccggttagaagcaacaaggggaaccaagttagcgccggcatggccttgcatgacacgct 523
           ||| ||||||||||||||||||||||| |||||| || ||||| ||||||||||| ||||
Sbjct: 717 tcctgttagaagcaacaaggggaaccaggttagcaccagcatgtccttgcatgacgcgct 658

                     
Query: 524 tccagtgttc 533
           ||||||||||
Sbjct: 657 tccagtgttc 648
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>gb|AY111916.1| Zea mays CL4656_1 mRNA sequence
          Length = 621

 Score =  216 bits (109), Expect = 6e-53
 Identities = 253/301 (84%)
 Strand = Plus / Plus

                                                                       
Query: 234 gccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctgaatatccccca 293
           ||||||||||||||| || ||||||||||| |||||||||| |||||||||||||||  |
Sbjct: 193 gccatccaacgtcagtagcactttgtatagttcagggcgccggtccctgaatatcccgta 252

                                                                       
Query: 294 gccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagcacctcctcgtc 353
            || || ||  | || |||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 253 accatgcctaatcgacttgatctcatccaagtcaaactctgccaccagcacttcctcgtc 312

                                                                       
Query: 354 cttgtcgtttgcgagcttcacgatttctccagttggccctgcgatgaacgagttcccgta 413
            |||||||| || |||||||| |||||||| ||||| ||||| ||||| || ||||| ||
Sbjct: 313 tttgtcgttagcaagcttcactatttctccggttggtcctgcaatgaaggaattcccata 372

                                                                       
Query: 414 gaactttatggtgctgttgccatgctcagtctcgacggtttcctttcctatccggttaga 473
           |||  |||| | | | |||||||||||||| || || |||||  | || |||||||| ||
Sbjct: 373 gaaggttatcgaggtcttgccatgctcagtgtcaacagtttctctgccaatccggttgga 432

                                                                       
Query: 474 agcaacaaggggaaccaagttagcgccggcatggccttgcatgacacgcttccagtgttc 533
           ||||||||| || |||||||| || || |||||||||||||| || |||||||| |||||
Sbjct: 433 agcaacaagagggaccaagttggcaccagcatggccttgcataacccgcttccaatgttc 492

            
Query: 534 a 534
           |
Sbjct: 493 a 493
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  119 bits (60), Expect = 1e-23
 Identities = 144/172 (83%)
 Strand = Plus / Minus

                                                                            
Query: 224      atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 283
                ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| |
Sbjct: 19672406 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 19672347

                                                                            
Query: 284      atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 343
                |||||||||| || || || || || |||||||||||||||||||||||||| || || |
Sbjct: 19672346 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 19672287

                                                                    
Query: 344      cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgc 395
                | || || || ||||| ||||| |||||||| ||||| || |||||||||||
Sbjct: 19672286 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgc 19672235



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                            
Query: 391      cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
                ||||| ||||| || |||||| ||||  |||| ||||| |  |||||||||||||| |||
Sbjct: 19672167 cctgctatgaatgaattcccgaagaatgttatagtgctttcaccatgctcagtctcaacg 19672108

                                                       
Query: 451      gtttcctttcctatccggttagaagcaacaaggggaacc 489
                |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 19672107 gtttcccttcctatcctgttagaagcaacaaggggaacc 19672069



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                                
Query: 503      catggccttgcatgacacgcttccagtgttca 534
                ||||||||||||||||||||||||||||||||
Sbjct: 18344656 catggccttgcatgacacgcttccagtgttca 18344625



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 487      accaagttagcgccggcatggccttgcatgacacgcttccagtgttc 533
                |||| |||||| || ||||| ||||||||||| ||||||||||||||
Sbjct: 19671937 accaggttagcaccagcatgtccttgcatgacgcgcttccagtgttc 19671891
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>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1136H02
          Length = 145086

 Score =  119 bits (60), Expect = 1e-23
 Identities = 144/172 (83%)
 Strand = Plus / Minus

                                                                         
Query: 224   atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 283
             ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| |
Sbjct: 29164 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 29105

                                                                         
Query: 284   atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 343
             |||||||||| || || || || || |||||||||||||||||||||||||| || || |
Sbjct: 29104 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 29045

                                                                 
Query: 344   cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgc 395
             | || || || ||||| ||||| |||||||| ||||| || |||||||||||
Sbjct: 29044 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgc 28993



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                         
Query: 391   cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
             ||||| ||||| || |||||| ||||  |||| ||||| |  |||||||||||||| |||
Sbjct: 28925 cctgctatgaatgaattcccgaagaatgttatagtgctttcaccatgctcagtctcaacg 28866

                                                    
Query: 451   gtttcctttcctatccggttagaagcaacaaggggaacc 489
             |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 28865 gtttcccttcctatcctgttagaagcaacaaggggaacc 28827



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 487   accaagttagcgccggcatggccttgcatgacacgcttccagtgttc 533
             |||| |||||| || ||||| ||||||||||| ||||||||||||||
Sbjct: 28695 accaggttagcaccagcatgtccttgcatgacgcgcttccagtgttc 28649
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>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0605D08
          Length = 144340

 Score =  119 bits (60), Expect = 1e-23
 Identities = 144/172 (83%)
 Strand = Plus / Minus

                                                                          
Query: 224    atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 283
              ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| |
Sbjct: 138692 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 138633

                                                                          
Query: 284    atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 343
              |||||||||| || || || || || |||||||||||||||||||||||||| || || |
Sbjct: 138632 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 138573

                                                                  
Query: 344    cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgc 395
              | || || || ||||| ||||| |||||||| ||||| || |||||||||||
Sbjct: 138572 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgc 138521



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                          
Query: 391    cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
              ||||| ||||| || |||||| ||||  |||| ||||| |  |||||||||||||| |||
Sbjct: 138453 cctgctatgaatgaattcccgaagaatgttatagtgctttcaccatgctcagtctcaacg 138394

                                                     
Query: 451    gtttcctttcctatccggttagaagcaacaaggggaacc 489
              |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 138393 gtttcccttcctatcctgttagaagcaacaaggggaacc 138355



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 487    accaagttagcgccggcatggccttgcatgacacgcttccagtgttc 533
              |||| |||||| || ||||| ||||||||||| ||||||||||||||
Sbjct: 138223 accaggttagcaccagcatgtccttgcatgacgcgcttccagtgttc 138177
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>gb|DQ428312.1| Sorghum bicolor voucher NSL87666 locus PRC0343 genomic sequence
          Length = 1472

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1387 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 1328

                                            
Query: 451  gtttcctttcctatccggttagaagcaacaag 482
            |||||  | || |||||||| |||||||||||
Sbjct: 1327 gtttctctgccaatccggttggaagcaacaag 1296



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 487  accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
            |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 1141 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 1094
to top
>gb|DQ428305.1| Sorghum bicolor voucher NSL51030 locus PRC0343 genomic sequence
          Length = 1472

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1387 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 1328

                                            
Query: 451  gtttcctttcctatccggttagaagcaacaag 482
            |||||  | || |||||||| |||||||||||
Sbjct: 1327 gtttctctaccaatccggttggaagcaacaag 1296



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 487  accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
            |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 1141 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 1094
to top
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0001A11
          Length = 153252

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                            
Query: 503  catggccttgcatgacacgcttccagtgttca 534
            ||||||||||||||||||||||||||||||||
Sbjct: 7580 catggccttgcatgacacgcttccagtgttca 7549
to top
>gb|DQ428320.1| Sorghum propinquum locus PRC0343 genomic sequence
          Length = 1102

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1018 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 959

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 958  gtttctctgccaatccggttggaagcaac 930



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 771 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 724
to top
>gb|DQ428319.1| Sorghum bicolor voucher PI585454 locus PRC0343 genomic sequence
          Length = 1480

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1396 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 1337

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 1336 gtttctctgccaatccggttggaagcaac 1308



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 487  accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
            |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 1141 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 1094
to top
>gb|DQ428318.1| Sorghum bicolor voucher PI267539 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428317.1| Sorghum bicolor voucher PI267408 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428316.1| Sorghum bicolor voucher PI221607 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428315.1| Sorghum bicolor voucher PI152702 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428314.1| Sorghum bicolor voucher NSL92371 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428313.1| Sorghum bicolor voucher NSL87902 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428311.1| Sorghum bicolor voucher NSL77217 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428310.1| Sorghum bicolor voucher NSL77034 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428309.1| Sorghum bicolor voucher NSL56174 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428308.1| Sorghum bicolor voucher NSL56003 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428307.1| Sorghum bicolor voucher NSL55243 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428306.1| Sorghum bicolor voucher NSL51365 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428304.1| Sorghum bicolor voucher NSL50875 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>gb|DQ428303.1| Sorghum bicolor voucher BTx623 locus PRC0343 genomic sequence
          Length = 1114

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 450
            ||||| ||||| || ||||| |||||  |||| ||||| ||||||||||||||||| || 
Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971

                                         
Query: 451  gtttcctttcctatccggttagaagcaac 479
            |||||  | || |||||||| ||||||||
Sbjct: 970  gtttctctgccaatccggttggaagcaac 942



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 487 accaagttagcgccggcatggccttgcatgacacgcttccagtgttca 534
           |||||||| || || |||||||||||||| || |||||||| ||||||
Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttca 728
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 503     catggccttgcatgacacgcttccagtgttca 534
               |||||||||||||||||| | |||||||||||
Sbjct: 1831371 catggccttgcatgacacacctccagtgttca 1831402



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 487      accaagttagcgccggcatggccttgcatgacac 520
                |||||| |||||||  ||||||||||||||||||
Sbjct: 27367875 accaagctagcgccaacatggccttgcatgacac 27367842
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>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0009H02
          Length = 155388

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 503    catggccttgcatgacacgcttccagtgttca 534
              |||||||||||||||||| | |||||||||||
Sbjct: 113732 catggccttgcatgacacacctccagtgttca 113763
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>gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosome 6, complete sequence
          Length = 216271

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 48     tatttttattgatgttatatatt 70
              |||||||||||||||||||||||
Sbjct: 118070 tatttttattgatgttatatatt 118048



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 48   tatttttattgatgttatatat 69
            ||||||||||||||||||||||
Sbjct: 2703 tatttttattgatgttatatat 2682
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>gb|AC137735.5| Homo sapiens chromosome 17, clone CTD-2582D11, complete sequence
          Length = 169483

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 176    ttgtggagctcatttcctctttc 198
              |||||||||||||||||||||||
Sbjct: 130791 ttgtggagctcatttcctctttc 130769
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>dbj|AP004503.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02M03, TM0034a,
             complete sequence
          Length = 83232

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 216   ggatgatgatgatgtcttgccat 238
             |||||||||||||||||||||||
Sbjct: 51779 ggatgatgatgatgtcttgccat 51757
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>ref|XM_469009.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 885

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 340 agcacctcctcgtccttgtcgt 361
           ||||||||||||||||||||||
Sbjct: 764 agcacctcctcgtccttgtcgt 743
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>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete
             sequence
          Length = 120254

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 340   agcacctcctcgtccttgtcgt 361
             ||||||||||||||||||||||
Sbjct: 98069 agcacctcctcgtccttgtcgt 98048
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 340      agcacctcctcgtccttgtcgt 361
                ||||||||||||||||||||||
Sbjct: 24375888 agcacctcctcgtccttgtcgt 24375909



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 503      catggccttgcatgacacgcttccagtgttca 534
                |||| ||||||||| || ||||||||||||||
Sbjct: 27584002 catgaccttgcatggcatgcttccagtgttca 27583971
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>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence,
            complete sequence
          Length = 171664

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 340  agcacctcctcgtccttgtcgt 361
            ||||||||||||||||||||||
Sbjct: 4736 agcacctcctcgtccttgtcgt 4715
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 340      agcacctcctcgtccttgtcgt 361
                ||||||||||||||||||||||
Sbjct: 24293357 agcacctcctcgtccttgtcgt 24293378



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 503      catggccttgcatgacacgcttccagtgttca 534
                |||| ||||||||| || ||||||||||||||
Sbjct: 27675325 catgaccttgcatggcatgcttccagtgttca 27675294
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>gb|AC140334.3| Mus musculus BAC clone RP23-244J7 from chromosome 6, complete sequence
          Length = 192598

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 48     tatttttattgatgttatatat 69
              ||||||||||||||||||||||
Sbjct: 157196 tatttttattgatgttatatat 157217



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 48    tatttttattgatgttatatat 69
             ||||||||||||||||||||||
Sbjct: 39974 tatttttattgatgttatatat 39995
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>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 487   accaagttagcgccggcatggccttgcatgacac 520
             |||||| |||||||  ||||||||||||||||||
Sbjct: 69402 accaagctagcgccaacatggccttgcatgacac 69369
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>dbj|AK108094.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-A06, full
           insert sequence
          Length = 1431

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 340 agcacctcctcgtccttgtcgt 361
           ||||||||||||||||||||||
Sbjct: 862 agcacctcctcgtccttgtcgt 841
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>dbj|AK063184.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-B02, full
           insert sequence
          Length = 703

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 487 accaagttagcgccggcatggccttgcatgacac 520
           |||||| |||||||  ||||||||||||||||||
Sbjct: 184 accaagctagcgccaacatggccttgcatgacac 151
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>gb|AC163709.3| Gallus gallus BAC clone CH261-60F22 from chromosome ul, complete sequence
          Length = 210984

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 176    ttgtggagctcatttcctctttcata 201
              ||||||||||||||||| ||||||||
Sbjct: 147760 ttgtggagctcatttcccctttcata 147785
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>emb|AL354743.33| Human DNA sequence from clone RP4-785P20 on chromosome 1p36.23-36.33
             Contains the 3' end of the PRDM16 gene for PR domain
             containing 16 and two CpG islands, complete sequence
          Length = 140572

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 330   ctctgccaccagcacctcctc 350
             |||||||||||||||||||||
Sbjct: 14673 ctctgccaccagcacctcctc 14693
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>gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169964

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 187    atttcctctttcataaaaagtggaa 211
              |||||||| ||||||||||||||||
Sbjct: 103666 atttcctcattcataaaaagtggaa 103642
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>gb|AC117376.3| Homo sapiens 12 BAC RP11-349K16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177041

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   catttcctctttcataaaaag 206
             |||||||||||||||||||||
Sbjct: 13180 catttcctctttcataaaaag 13200
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>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0082P17, complete sequence
          Length = 157539

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 503   catggccttgcatgacacgcttcc 526
             |||| |||||||||||||||||||
Sbjct: 41172 catgaccttgcatgacacgcttcc 41149
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>gb|AC140232.2| Mus musculus BAC clone RP24-498F17 from chromosome 5, complete sequence
          Length = 183612

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    cctctttcataaaaagtgga 210
              ||||||||||||||||||||
Sbjct: 153310 cctctttcataaaaagtgga 153291
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>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0030I07, complete sequence
          Length = 122733

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 503   catggccttgcatgacacgcttcc 526
             |||| |||||||||||||||||||
Sbjct: 93153 catgaccttgcatgacacgcttcc 93130
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>emb|CR450706.7| Zebrafish DNA sequence from clone CH211-14K11 in linkage group 25,
             complete sequence
          Length = 192643

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 47    gtatttttattgatgttatatatt 70
             ||||||||||| ||||||||||||
Sbjct: 27811 gtatttttattaatgttatatatt 27788
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>ref|XM_741110.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000863.01.0)
            partial mRNA
          Length = 1416

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 47   gtatttttattgatgttatatatt 70
            ||||||||||||||||| ||||||
Sbjct: 1114 gtatttttattgatgttttatatt 1091
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>ref|XM_501190.1| Yarrowia lipolytica CLIB122, YALI0B21626g predicted mRNA
          Length = 3594

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  ccagcacctcctcgtccttg 357
            ||||||||||||||||||||
Sbjct: 3523 ccagcacctcctcgtccttg 3504
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>emb|AL136100.12| Human DNA sequence from clone RP11-534P19 on chromosome 6 Contains a
             pseudogene similar to zinc finger proteins, complete
             sequence
          Length = 172212

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    ttttattgatgttatatatt 70
             ||||||||||||||||||||
Sbjct: 64231 ttttattgatgttatatatt 64212
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>gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166471

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    ggtatttttattgatgttatatat 69
             ||||| ||||||||||||||||||
Sbjct: 40135 ggtatatttattgatgttatatat 40158
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 503      catggccttgcatgacacgcttcc 526
                |||| |||||||||||||||||||
Sbjct: 26630895 catgaccttgcatgacacgcttcc 26630872
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 507     gccttgcatgacacgcttccagtgttca 534
               |||||||||||||||||  |||||||||
Sbjct: 2172458 gccttgcatgacacgctcacagtgttca 2172485
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>gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genomic sequence, complete
             sequence
          Length = 136982

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 503   catggccttgcatgacacgcttccagtgttca 534
             |||| ||||||||| || ||||||||||||||
Sbjct: 25699 catgaccttgcatggcatgcttccagtgttca 25668
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>dbj|AP005585.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0448B11
          Length = 179858

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 507   gccttgcatgacacgcttccagtgttca 534
             |||||||||||||||||  |||||||||
Sbjct: 34296 gccttgcatgacacgctcacagtgttca 34323
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>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1610_C11
          Length = 104553

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 507   gccttgcatgacacgcttccagtgttca 534
             |||||||||||||||||  |||||||||
Sbjct: 97875 gccttgcatgacacgctcacagtgttca 97902
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>gb|AC005323.1|AC005323 Homo sapiens chromosome 17, clone hRPK.799_N_11, complete sequence
          Length = 204082

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   gtactttgtatagatcaggg 270
             ||||||||||||||||||||
Sbjct: 96369 gtactttgtatagatcaggg 96350
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 503      catggccttgcatgacacgcttcc 526
                |||| |||||||||||||||||||
Sbjct: 26956159 catgaccttgcatgacacgcttcc 26956136
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>gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complete sequence
          Length = 195371

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   cctctttcataaaaagtgga 210
             ||||||||||||||||||||
Sbjct: 38316 cctctttcataaaaagtgga 38297
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 430     ttgccatgctcagtctcgac 449
               ||||||||||||||||||||
Sbjct: 2749568 ttgccatgctcagtctcgac 2749587
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     ccagcacctcctcgtccttg 357
               ||||||||||||||||||||
Sbjct: 2844730 ccagcacctcctcgtccttg 2844749
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>emb|AL837522.8| Mouse DNA sequence from clone RP23-264L10 on chromosome 4, complete
              sequence
          Length = 128976

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 244    gtcagcagtactttgtatag 263
              ||||||||||||||||||||
Sbjct: 123407 gtcagcagtactttgtatag 123388
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>emb|AL645468.11| Mouse DNA sequence from clone RP23-246F18 on chromosome 4, complete
             sequence
          Length = 209764

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   tgtggagctcatttcctctt 196
             ||||||||||||||||||||
Sbjct: 47122 tgtggagctcatttcctctt 47141
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>emb|AL662835.11| Mouse DNA sequence from clone RP23-458A23 on chromosome 11, complete
            sequence
          Length = 162024

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 147  ccgtttgtccgtttggtgttctcc 170
            ||||||||||||||||| ||||||
Sbjct: 8412 ccgtttgtccgtttggttttctcc 8389


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,766,807
Number of Sequences: 3902068
Number of extensions: 4766807
Number of successful extensions: 103074
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102566
Number of HSP's gapped (non-prelim): 508
length of query: 534
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 511
effective length of database: 17,143,297,704
effective search space: 8760225126744
effective search space used: 8760225126744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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