ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 44 0.57
2ref|XM_823013.1| Trypanosoma brucei TREU927 variant surface glyc... 42 2.2
3emb|Z79755.1|CEF43G9 Caenorhabditis elegans Cosmid F43G9, comple... 42 2.2
4gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, comple... 42 2.2
5emb|BX548058.9| Zebrafish DNA sequence from clone CH211-181H11 i... 42 2.2
6gb|AC084541.1|CBRG27D19 Caenorhabditis briggsae cosmid G27D19, c... 42 2.2
7gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.2
8dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 2.2
9emb|BX548060.7| Zebrafish DNA sequence from clone CH211-117I10 i... 42 2.2
10dbj|AB073400.1| Brassica napus mitochondrial linear plasmid DNA,... 42 2.2
11gb|AC164549.4| Mus musculus BAC clone RP24-273K1 from chromosome... 40 8.8
12gb|AY850394.1| Lycopersicon esculentum cultivar Heinz1706 chromo... 40 8.8
13ref|XM_705503.1| Candida albicans SC5314 putative spliceosomal t... 40 8.8
14ref|XM_705490.1| Candida albicans SC5314 putative spliceosomal t... 40 8.8
15emb|CR380838.2| Pan troglodytes chromosome X BAC RP43-021E02, co... 40 8.8
16gb|AC084438.5| Homo sapiens BAC clone RP11-89D15 from 7, complet... 40 8.8
17ref|XM_664468.1| Plasmodium berghei strain ANKA hypothetical pro... 40 8.8
18gb|AC154559.2| Mus musculus BAC clone RP23-399P3 from chromosome... 40 8.8
19emb|CR956417.1| Pig DNA sequence from clone CH242-300K12 on chro... 40 8.8
20emb|CR626910.5| Zebrafish DNA sequence from clone DKEY-204E20 in... 40 8.8
21emb|Z99569.1|HS106H14 Human DNA sequence from clone RP1-106H14 o... 40 8.8
22emb|AL590422.15| Human DNA sequence from clone RP11-444D13 on ch... 40 8.8
23gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 8.8
24gb|AE014838.1| Plasmodium falciparum 3D7 chromosome 11 section 3... 40 8.8
25emb|AL136133.14| Human DNA sequence from clone CTA-253N17 on chr... 40 8.8
26emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 8.8
27emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 8.8
28emb|AL583920.1|MLEPRTN4 Mycobacterium leprae strain TN complete ... 40 8.8
29emb|AL669833.7| Mouse DNA sequence from clone RP23-51C16 on chro... 40 8.8
30gb|AC116315.2| Homo sapiens chromosome 1 clone RP11-211J9, compl... 40 8.8
31emb|BX248392.16| Zebrafish DNA sequence from clone CH211-220F12 ... 40 8.8
32gb|AE012056.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 8.8
33gb|AC104458.2| Homo sapiens chromosome 1 clone RP5-1102E8, compl... 40 8.8
34gb|U15186.1|MLU15186 Mycobacterium leprae cosmid L471 40 8.8
35gb|AC079768.8| Homo sapiens BAC clone RP11-205M3 from 4, complet... 40 8.8
36gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, comp... 40 8.8
37gb|AC133597.5| Mus musculus BAC clone RP24-313B5 from chromosome... 40 8.8
38dbj|AK084722.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 8.8
39dbj|AK084705.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 8.8
40gb|AC026230.5|AC026230 Homo sapiens chromosome 5 clone CTD-2288O... 40 8.8
41gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 8.8
42gb|AC095041.3| Homo sapiens BAC clone RP11-84H6 from 4, complete... 40 8.8
43gb|AC108205.5| Homo sapiens BAC clone RP11-140N6 from 4, complet... 40 8.8
44dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.8
45gb|AC068274.5| Homo sapiens BAC clone RP11-119B15 from 2, comple... 40 8.8
46emb|BX470142.4| Zebrafish DNA sequence from clone CH211-59C17 in... 40 8.8
47emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 ... 40 8.8
48emb|BX276107.12| Zebrafish DNA sequence from clone CH211-218C17 ... 40 8.8
49dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.8
50emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chr... 40 8.8
51gb|AC139155.3| Mus musculus BAC clone RP24-209E3 from 13, comple... 40 8.8
52dbj|AP001628.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 8.8
53dbj|AP001627.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 8.8
54dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiestera... 40 8.8 
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 525     cacatcagcgcgaccagcgccgccac 550
               ||||||||||||||||||||| ||||
Sbjct: 1975210 cacatcagcgcgaccagcgccaccac 1975235
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>ref|XM_823013.1| Trypanosoma brucei TREU927 variant surface glycoprotein
            (Tb11.51.0005) partial mRNA
          Length = 1437

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 25   caaatatgatgaaacaaaaaa 45
            |||||||||||||||||||||
Sbjct: 1248 caaatatgatgaaacaaaaaa 1268
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>emb|Z79755.1|CEF43G9 Caenorhabditis elegans Cosmid F43G9, complete sequence
          Length = 38166

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 22    caacaaatatgatgaaacaaa 42
             |||||||||||||||||||||
Sbjct: 11287 caacaaatatgatgaaacaaa 11307
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>gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, complete sequence
          Length = 195428

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 198   caaagaactagaggtcttgga 218
             |||||||||||||||||||||
Sbjct: 71378 caaagaactagaggtcttgga 71398
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>emb|BX548058.9| Zebrafish DNA sequence from clone CH211-181H11 in linkage group 18,
             complete sequence
          Length = 95339

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 346   caaagacaacacaacagtcaa 366
             |||||||||||||||||||||
Sbjct: 54424 caaagacaacacaacagtcaa 54444
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>gb|AC084541.1|CBRG27D19 Caenorhabditis briggsae cosmid G27D19, complete sequence
          Length = 40961

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 567   agcattgctgctgccatgacc 587
             |||||||||||||||||||||
Sbjct: 16394 agcattgctgctgccatgacc 16414
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 530     cagcgcgaccagcgccgccac 550
               |||||||||||||||||||||
Sbjct: 4528314 cagcgcgaccagcgccgccac 4528294
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 526     acatcagcgcgaccagcgccg 546
               |||||||||||||||||||||
Sbjct: 2784363 acatcagcgcgaccagcgccg 2784343



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 530     cagcgcgaccagcgccgcca 549
               ||||||||||||||||||||
Sbjct: 7131609 cagcgcgaccagcgccgcca 7131628
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>emb|BX548060.7| Zebrafish DNA sequence from clone CH211-117I10 in linkage group 18,
            complete sequence
          Length = 120346

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 346  caaagacaacacaacagtcaa 366
            |||||||||||||||||||||
Sbjct: 8337 caaagacaacacaacagtcaa 8317
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>dbj|AB073400.1| Brassica napus mitochondrial linear plasmid DNA, complete sequence
          Length = 11640

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    aaatatgatgaaacaaaaaat 46
             |||||||||||||||||||||
Sbjct: 11255 aaatatgatgaaacaaaaaat 11235
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>gb|AC164549.4| Mus musculus BAC clone RP24-273K1 from chromosome 16, complete sequence
          Length = 182658

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   acagactcagatgacacaca 135
             ||||||||||||||||||||
Sbjct: 96729 acagactcagatgacacaca 96748
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>gb|AY850394.1| Lycopersicon esculentum cultivar Heinz1706 chromosome 12 centromeric
              region
          Length = 326112

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    acacacataagcaaataaaa 148
              ||||||||||||||||||||
Sbjct: 208660 acacacataagcaaataaaa 208641
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>ref|XM_705503.1| Candida albicans SC5314 putative spliceosomal translocase-like
           protein Snu114p (CaO19.144), mRNA
          Length = 3069

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 cttcttcttcatcttgcaga 330
           ||||||||||||||||||||
Sbjct: 160 cttcttcttcatcttgcaga 141
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>ref|XM_705490.1| Candida albicans SC5314 putative spliceosomal translocase-like
           protein Snu114p (CaO19.7784), mRNA
          Length = 3069

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 cttcttcttcatcttgcaga 330
           ||||||||||||||||||||
Sbjct: 160 cttcttcttcatcttgcaga 141
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>emb|CR380838.2| Pan troglodytes chromosome X BAC RP43-021E02, complete sequence
          Length = 205764

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    acatagaaaaatagaacaga 120
              ||||||||||||||||||||
Sbjct: 135129 acatagaaaaatagaacaga 135110
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>gb|AC084438.5| Homo sapiens BAC clone RP11-89D15 from 7, complete sequence
          Length = 133439

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 132   cacataagcaaataaaagcaaaca 155
             |||||||||||||||||| |||||
Sbjct: 35930 cacataagcaaataaaagtaaaca 35953
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>ref|XM_664468.1| Plasmodium berghei strain ANKA hypothetical protein
          (PB100014.00.0) partial mRNA
          Length = 145

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 26 aaatatgatgaaacaaaaaa 45
          ||||||||||||||||||||
Sbjct: 84 aaatatgatgaaacaaaaaa 65
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>gb|AC154559.2| Mus musculus BAC clone RP23-399P3 from chromosome 14, complete sequence
          Length = 198078

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    aaaaaattcccccaaatttattct 63
             |||||| |||||||||||||||||
Sbjct: 68588 aaaaaaatcccccaaatttattct 68565
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>emb|CR956417.1| Pig DNA sequence from clone CH242-300K12 on chromosome 17, complete
             sequence
          Length = 176004

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   ataagcaaataaaagcaaac 154
             ||||||||||||||||||||
Sbjct: 34130 ataagcaaataaaagcaaac 34149
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>emb|CR626910.5| Zebrafish DNA sequence from clone DKEY-204E20 in linkage group 14,
             complete sequence
          Length = 168298

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 627   tcactcactgcttatgactg 646
             ||||||||||||||||||||
Sbjct: 10653 tcactcactgcttatgactg 10672
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>emb|Z99569.1|HS106H14 Human DNA sequence from clone RP1-106H14 on chromosome Xq21.1-21.33
             Contains a CpG island, complete sequence
          Length = 80730

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   acatagaaaaatagaacaga 120
             ||||||||||||||||||||
Sbjct: 55777 acatagaaaaatagaacaga 55758
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>emb|AL590422.15| Human DNA sequence from clone RP11-444D13 on chromosome 1 Contains part
             of the RGL1 gene for ral guanine nucleotide dissociation
             stimulator-like 1 and a novel gene, complete sequence
          Length = 198312

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   taagcaaataaaagcaaaca 155
             ||||||||||||||||||||
Sbjct: 33853 taagcaaataaaagcaaaca 33834
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 528     atcagcgcgaccagcgccgc 547
               ||||||||||||||||||||
Sbjct: 1205273 atcagcgcgaccagcgccgc 1205292
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>gb|AE014838.1| Plasmodium falciparum 3D7 chromosome 11 section 3 of 8 of the complete
              sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     aaatatgatgaaacaaaaaa 45
              ||||||||||||||||||||
Sbjct: 182370 aaatatgatgaaacaaaaaa 182351
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>emb|AL136133.14| Human DNA sequence from clone CTA-253N17 on chromosome 1 Contains the
             5' end of the C1orf25 gene for chromosome 1 open reading
             frame 25, the 5' end of the C1orf26 gene for chromosome 1
             open reading frame 26 and a CpG island, complete sequence
          Length = 85565

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    aaaaaattcccccaaattta 59
             ||||||||||||||||||||
Sbjct: 80900 aaaaaattcccccaaattta 80881
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 55      atttattctgattggtacaa 74
               ||||||||||||||||||||
Sbjct: 1623940 atttattctgattggtacaa 1623959
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 527     catcagcgcgaccagcgccgccac 550
               ||||||| ||||||||||||||||
Sbjct: 2897582 catcagcccgaccagcgccgccac 2897605
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>emb|AL583920.1|MLEPRTN4 Mycobacterium leprae strain TN complete genome; segment 4/10
          Length = 348450

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 568    gcattgctgctgccatgacc 587
              ||||||||||||||||||||
Sbjct: 340298 gcattgctgctgccatgacc 340317
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>emb|AL669833.7| Mouse DNA sequence from clone RP23-51C16 on chromosome 11, complete
             sequence
          Length = 48352

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   acatagaaaaatagaacaga 120
             ||||||||||||||||||||
Sbjct: 20066 acatagaaaaatagaacaga 20085
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>gb|AC116315.2| Homo sapiens chromosome 1 clone RP11-211J9, complete sequence
          Length = 154057

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  cacataagcaaataaaagca 151
            ||||||||||||||||||||
Sbjct: 6776 cacataagcaaataaaagca 6757
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>emb|BX248392.16| Zebrafish DNA sequence from clone CH211-220F12 in linkage group 18,
              complete sequence
          Length = 183594

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    aacatagaaaaatagaacag 119
              ||||||||||||||||||||
Sbjct: 182373 aacatagaaaaatagaacag 182354
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>gb|AE012056.1| Xanthomonas axonopodis pv. citri str. 306,  section 434 of 469 of the
            complete genome
          Length = 9445

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 538  ccagcgccgccacggcaacg 557
            ||||||||||||||||||||
Sbjct: 6348 ccagcgccgccacggcaacg 6329
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>gb|AC104458.2| Homo sapiens chromosome 1 clone RP5-1102E8, complete sequence
          Length = 135063

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   cacataagcaaataaaagca 151
             ||||||||||||||||||||
Sbjct: 81579 cacataagcaaataaaagca 81560
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>gb|U15186.1|MLU15186 Mycobacterium leprae cosmid L471
          Length = 36241

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 568  gcattgctgctgccatgacc 587
            ||||||||||||||||||||
Sbjct: 4845 gcattgctgctgccatgacc 4826
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>gb|AC079768.8| Homo sapiens BAC clone RP11-205M3 from 4, complete sequence
          Length = 134004

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     atgatgaaacaaaaaattcc 49
              ||||||||||||||||||||
Sbjct: 110090 atgatgaaacaaaaaattcc 110109
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>gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, complete sequence
          Length = 166253

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   actagcaggccttctccctg 266
             ||||||||||||||||||||
Sbjct: 45380 actagcaggccttctccctg 45361
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>gb|AC133597.5| Mus musculus BAC clone RP24-313B5 from chromosome 16, complete sequence
          Length = 192699

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    acagactcagatgacacaca 135
              ||||||||||||||||||||
Sbjct: 192537 acagactcagatgacacaca 192518
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>dbj|AK084722.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330035M07 product:unclassifiable, full
           insert sequence
          Length = 2183

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 35  gaaacaaaaaattcccccaaattt 58
           |||| |||||||||||||||||||
Sbjct: 792 gaaaaaaaaaattcccccaaattt 769
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>dbj|AK084705.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330034E10 product:unclassifiable, full
           insert sequence
          Length = 2183

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 35  gaaacaaaaaattcccccaaattt 58
           |||| |||||||||||||||||||
Sbjct: 792 gaaaaaaaaaattcccccaaattt 769
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>gb|AC026230.5|AC026230 Homo sapiens chromosome 5 clone CTD-2288O8, complete sequence
          Length = 114802

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  actagcaggccttctccctg 266
            ||||||||||||||||||||
Sbjct: 7045 actagcaggccttctccctg 7064
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 528     atcagcgcgaccagcgccgc 547
               ||||||||||||||||||||
Sbjct: 2340305 atcagcgcgaccagcgccgc 2340324
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>gb|AC095041.3| Homo sapiens BAC clone RP11-84H6 from 4, complete sequence
          Length = 176008

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   acatagaaaaatagaacaga 120
             ||||||||||||||||||||
Sbjct: 82773 acatagaaaaatagaacaga 82792
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>gb|AC108205.5| Homo sapiens BAC clone RP11-140N6 from 4, complete sequence
          Length = 132623

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   acatagaaaaatagaacaga 120
             ||||||||||||||||||||
Sbjct: 32997 acatagaaaaatagaacaga 33016
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 527     catcagcgcgaccagcgccg 546
               ||||||||||||||||||||
Sbjct: 1722446 catcagcgcgaccagcgccg 1722427
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>gb|AC068274.5| Homo sapiens BAC clone RP11-119B15 from 2, complete sequence
          Length = 118955

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  acatagaaaaatagaacaga 120
            ||||||||||||||||||||
Sbjct: 5899 acatagaaaaatagaacaga 5880
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>emb|BX470142.4| Zebrafish DNA sequence from clone CH211-59C17 in linkage group 18,
             complete sequence
          Length = 58289

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   aacatagaaaaatagaacag 119
             ||||||||||||||||||||
Sbjct: 40813 aacatagaaaaatagaacag 40832
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>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20,
              complete sequence
          Length = 151552

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    aagcaaataaaagcaaacaa 156
              ||||||||||||||||||||
Sbjct: 126303 aagcaaataaaagcaaacaa 126322
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>emb|BX276107.12| Zebrafish DNA sequence from clone CH211-218C17 in linkage group 18,
           complete sequence
          Length = 46296

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 100 aacatagaaaaatagaacag 119
           ||||||||||||||||||||
Sbjct: 779 aacatagaaaaatagaacag 760
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>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     gatgaaacaaaaaattcccc 51
              ||||||||||||||||||||
Sbjct: 249893 gatgaaacaaaaaattcccc 249874
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>emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chromosome 14, complete
             sequence
          Length = 215157

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    aaaaaattcccccaaatttattct 63
             |||||| |||||||||||||||||
Sbjct: 17903 aaaaaaatcccccaaatttattct 17880
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>gb|AC139155.3| Mus musculus BAC clone RP24-209E3 from 13, complete sequence
          Length = 161907

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    aacaaaaaattcccccaaat 56
             ||||||||||||||||||||
Sbjct: 70645 aacaaaaaattcccccaaat 70664
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>dbj|AP001628.1| Homo sapiens genomic DNA, chromosome 21, clone:KB51A8, MX1-D21S171
             region, complete sequence
          Length = 114835

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    gatgaaacaaaaaattcccc 51
             ||||||||||||||||||||
Sbjct: 11730 gatgaaacaaaaaattcccc 11711
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>dbj|AP001627.1| Homo sapiens genomic DNA, chromosome 21, clone:KB161B8, MX1-D21S171
             region, complete sequence
          Length = 125376

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    gatgaaacaaaaaattcccc 51
             ||||||||||||||||||||
Sbjct: 83018 gatgaaacaaaaaattcccc 82999
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>dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiesterase, complete cds
          Length = 125000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     gatgaaacaaaaaattcccc 51
              ||||||||||||||||||||
Sbjct: 104326 gatgaaacaaaaaattcccc 104307


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,100,488
Number of Sequences: 3902068
Number of extensions: 6100488
Number of successful extensions: 136016
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135471
Number of HSP's gapped (non-prelim): 545
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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