>gb|BT009584.1| Triticum aestivum clone wre1n.pk0044.b2:fis, full insert mRNA
           sequence
          Length = 876

 Score =  109 bits (55), Expect = 5e-21
 Identities = 84/93 (90%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 67  gagtaagatcagaaaccggcacaggagttctaagttaaccnnttacttaatctggcacag 126
           |||||||||||||||||||||||  ||||||||||||| |  |||||||||||| |||||
Sbjct: 776 gagtaagatcagaaaccggcacacaagttctaagttaatcaattacttaatctgacacag 717

                                            
Query: 127 cactatcaaatgcagtac-tagaattttacatg 158
           |||||| |||| |||||| ||||||||||||||
Sbjct: 716 cactatgaaatacagtacatagaattttacatg 684



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 225 gtcagaactccttacgcgagctctatancaagtgcanatgcaccgccaccgccg 278
           |||||| |||||||||| ||||| ||| | || ||| |||||||||||||||||
Sbjct: 666 gtcagagctccttacgccagctccataacgagcgcagatgcaccgccaccgccg 613



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 gcaggctccatctttggtgt 214
           ||||||||||||||||||||
Sbjct: 684 gcaggctccatctttggtgt 665

>emb|AL603724.3|RN141K6 Rattus norvegicus chromosome 20 clone PAC RPCI-31-484K6 strain Brown
            Norway (BN/ssNHsd), RT1n haplotype
          Length = 94535

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 161  gacacacaagcacctgaaact 181
            |||||||||||||||||||||
Sbjct: 9519 gacacacaagcacctgaaact 9499

>emb|CR388135.16| Zebrafish DNA sequence from clone CH211-152C12 in linkage group 19,
             complete sequence
          Length = 159848

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     attattataaaccacggattt 24
             |||||||||||||||||||||
Sbjct: 40235 attattataaaccacggattt 40215

>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence
          Length = 205646

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   acatggagacacacaagcac 173
             ||||||||||||||||||||
Sbjct: 45272 acatggagacacacaagcac 45253

>gb|AC004746.1| Homo sapiens BAC clone CTA-290G13 from 7, complete sequence
          Length = 158293

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     ttccaaaaacagctacacca 42
              ||||||||||||||||||||
Sbjct: 119216 ttccaaaaacagctacacca 119197

>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence
          Length = 204292

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   acatggagacacacaagcac 173
             ||||||||||||||||||||
Sbjct: 15019 acatggagacacacaagcac 15038

>emb|AL355173.25| Human DNA sequence from clone RP11-335P18 on chromosome 13 Contains the
             3' end of the PCDH9 gene for protocadherin 9 and a novel
             gene, complete sequence
          Length = 165699

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   acatggagacacacaagcac 173
             ||||||||||||||||||||
Sbjct: 55716 acatggagacacacaagcac 55697

>emb|AL138816.12| Human DNA sequence from clone RP11-235O20 on chromosome 13 Contains the
              3' end of the gene for a novel protein similar to heparan
              sulfate 6-sulfotransferase, complete sequence
          Length = 142420

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    acatggagacacacaagcac 173
              ||||||||||||||||||||
Sbjct: 105339 acatggagacacacaagcac 105320

>emb|BX470260.10| Zebrafish DNA sequence from clone CH211-125C23 in linkage group 14,
             complete sequence
          Length = 66554

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   acacaagcacctgaaactgc 183
             ||||||||||||||||||||
Sbjct: 34117 acacaagcacctgaaactgc 34098

>gb|AC155934.2| Mus musculus BAC clone RP23-58N8 from chromosome 9, complete sequence
          Length = 198059

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   cagaggcaggctccatcttt 209
             ||||||||||||||||||||
Sbjct: 26453 cagaggcaggctccatcttt 26472

>gb|AC158516.2| Mus musculus BAC clone RP24-511A23 from chromosome 9, complete sequence
          Length = 167046

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    cagaggcaggctccatcttt 209
              ||||||||||||||||||||
Sbjct: 163143 cagaggcaggctccatcttt 163162

>gb|AC174384.2| Gallus gallus BAC clone CH261-128H23 from chromosome ul, complete
             sequence
          Length = 206900

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   ggtgtttgttacaaggtcag 229
             ||||||||||||||||||||
Sbjct: 99127 ggtgtttgttacaaggtcag 99146

>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     aaaccacggatttccaaaaa 31
              ||||||||||||||||||||
Sbjct: 352118 aaaccacggatttccaaaaa 352137


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,575,630
Number of Sequences: 3902068
Number of extensions: 3575630
Number of successful extensions: 49151
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49130
Number of HSP's gapped (non-prelim): 20
length of query: 280
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 258
effective length of database: 17,147,199,772
effective search space: 4423977541176
effective search space used: 4423977541176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)