Clone Information

BLAST Search Result

Clone Name	rbags24m06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL5A_ORYSA (P49625) 60S ribosomal protein L5-1	296	3e-80
2	RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2	296	5e-80
3	RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5	266	3e-71
4	RL5_ARATH (P49227) 60S ribosomal protein L5	258	1e-68
5	RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)	162	9e-40
6	RL5_CAEEL (P49405) 60S ribosomal protein L5	159	6e-39
7	RL5_BOMMO (O76190) 60S ribosomal protein L5	155	9e-38
8	RL5_STYCL (Q26481) 60S ribosomal protein L5	155	1e-37
9	RL5_HELAN (O65353) 60S ribosomal protein L5	152	1e-36
10	RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)	151	2e-36
11	RL5B_XENLA (P15126) 60S ribosomal protein L5-B	148	2e-35
12	RL5_DUNSA (O22608) 60S ribosomal protein L5	147	4e-35
13	RL5A_XENLA (P15125) 60S ribosomal protein L5-A	147	4e-35
14	RL5_MACFA (Q4R5M0) 60S ribosomal protein L5	145	2e-34
15	RL5_HUMAN (P46777) 60S ribosomal protein L5	145	2e-34
16	RL5_CHICK (P22451) 60S ribosomal protein L5	144	2e-34
17	RL5_RAT (P09895) 60S ribosomal protein L5	142	8e-34
18	RL5B_SCHPO (O74306) 60S ribosomal protein L5-B	141	2e-33
19	RL5_MOUSE (P47962) 60S ribosomal protein L5	141	2e-33
20	RL5A_SCHPO (P52822) 60S ribosomal protein L5-A	139	8e-33
21	RL5_ANOGA (O44248) 60S ribosomal protein L5	136	5e-32
22	RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosoma...	131	2e-30
23	RL18_METKA (Q8TZA5) 50S ribosomal protein L18P	58	3e-08
24	RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P	56	1e-07
25	RL18_METJA (P54044) 50S ribosomal protein L18P	54	6e-07
26	RL18_AERPE (Q9YF94) 50S ribosomal protein L18P	52	2e-06
27	RL18_METMP (Q6LXD4) 50S ribosomal protein L18P	50	5e-06
28	RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P	50	7e-06
29	RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P	50	9e-06
30	RL18_PYRHO (O59438) 50S ribosomal protein L18P	48	3e-05
31	RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)	48	3e-05
32	RL18_SULTO (Q975J9) 50S ribosomal protein L18P	48	3e-05
33	RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P	46	1e-04
34	RL18_METVA (P14033) 50S ribosomal protein L18P	44	5e-04
35	RL18_SULSO (Q9UX88) 50S ribosomal protein L18P	42	0.002
36	RL18_METTH (O26130) 50S ribosomal protein L18P	41	0.004
37	RL18_ARCFU (O28373) 50S ribosomal protein L18P	38	0.026
38	RL18_SULAC (O05640) 50S ribosomal protein L18P	38	0.034
39	RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18)...	35	0.29
40	RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)	34	0.38
41	ZN674_HUMAN (Q2M3X9) Zinc finger protein 674	33	0.64
42	FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3	32	2.4
43	ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atr...	31	3.2
44	MYF6_FUGRU (Q6SYV5) Myogenic factor 6 (Myf-6) (Muscle-specific r...	31	3.2
45	ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atr...	31	3.2
46	SRYD_DROME (P07664) Serendipity locus protein delta	31	3.2
47	FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3	31	4.2
48	FPRB_MYCLE (O33064) Probable ferredoxin/ferredoxin--NADP reducta...	31	4.2
49	ZEP1_HUMAN (P15822) Zinc finger protein 40 (Human immunodeficien...	31	4.2
50	JHD2A_MOUSE (Q6PCM1) JmjC domain-containing histone demethylatio...	30	5.4
51	UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstrea...	30	5.4
52	SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subun...	30	7.1
53	PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosp...	30	7.1
54	NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated prote...	30	7.1
55	NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (At...	30	7.1
56	CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (S...	30	7.1
57	RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)	30	9.3
58	ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (E...	30	9.3
59	VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein ...	30	9.3
60	YBX5_SCHPO (Q10203) Hypothetical protein C17D1.05 in chromosome II	30	9.3

>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1|
          Length = 304

 Score =  296 bits (759), Expect = 3e-80
 Identities = 145/178 (81%), Positives = 158/178 (88%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHS 523
           D+EYEGN+EATGED+ VEPADERRPFRALLDVGLIRTTTGNRVF           DIPHS
Sbjct: 117 DQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS 176

Query: 522 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 343
           DKRFAGFKKDEK LD++IHRKYIYGGHVADYMRS+A+EEPEK+Q HFSEY+KKGI AD M
Sbjct: 177 DKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGM 236

Query: 342 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAGA 169
           EA+YKKVHAAIRADP+MAKSTK  P THKRYN KKLTYE+RKASLVERLNALN+SAGA
Sbjct: 237 EALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGA 294

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>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2|
          Length = 304

 Score =  296 bits (757), Expect = 5e-80
 Identities = 145/178 (81%), Positives = 158/178 (88%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHS 523
           D+EYEGNVEATGED+ VEPADERRPFRALLDVGLIRTTTGNRVF           DIPHS
Sbjct: 117 DQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS 176

Query: 522 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 343
           DKRFAGFKKDEK LD++IHRKYIYGGHVADYMRS+A+EEPEK+Q HFSEY+KKGI AD M
Sbjct: 177 DKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGM 236

Query: 342 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAGA 169
           E++YKKVHAAIRADP+MAKSTK  P THKRYN KKLTYE+RKASLVERLNALN+SAGA
Sbjct: 237 ESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGA 294

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>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5|
          Length = 302

 Score =  266 bits (681), Expect = 3e-71
 Identities = 130/176 (73%), Positives = 147/176 (83%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHS 523
           D EYEGNVEATGED+SVEPAD RRPFRALLDVGLIRTTTGNRVF           DIPHS
Sbjct: 116 DAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS 175

Query: 522 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 343
           DKRFAG+ K+ + LD E+HRKYI+GGHVA YMR+L ++EPEKYQ+HFSEYIKKGI AD++
Sbjct: 176 DKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADEL 235

Query: 342 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSA 175
           E +YKKVHAAIRA+P   KS KP PK HKRYN KKLTY+ERKA LVERLNALN++A
Sbjct: 236 EGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAA 291

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>RL5_ARATH (P49227) 60S ribosomal protein L5|
          Length = 301

 Score =  258 bits (659), Expect = 1e-68
 Identities = 125/177 (70%), Positives = 142/177 (80%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHS 523
           D+EYEGNVEATGEDFSVEP D RRPFRALLDVGLIRTTTGNRVF           DIPHS
Sbjct: 116 DDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS 175

Query: 522 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 343
           DKRFAGF K+ K LDAEIHR YIYGGHV++YM+ L ++EPEK QTHFS YIKKG+ A+ +
Sbjct: 176 DKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESI 235

Query: 342 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAG 172
           E +YKKVHAAIRA+P+  K+ K APK HKRYN KKLTYEERK  L+ER+ ALN + G
Sbjct: 236 EEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGG 292

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>RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)|
          Length = 121

 Score =  162 bits (410), Expect = 9e-40
 Identities = 77/109 (70%), Positives = 88/109 (80%)
 Frame = -2

Query: 498 KDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVH 319
           KD K LDAE+HRKYIYGGHVA YM  L ++EPEKYQ+HFS YIK  ++ D++E +YKKVH
Sbjct: 3   KDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVH 62

Query: 318 AAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAG 172
           AAIR DPS  KS K  PKTHKRYN KKLTYEERKA L+ERLNALN + G
Sbjct: 63  AAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAAGG 111

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>RL5_CAEEL (P49405) 60S ribosomal protein L5|
          Length = 293

 Score =  159 bits (403), Expect = 6e-39
 Identities = 76/168 (45%), Positives = 113/168 (67%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHS 523
           D  Y+G+ E TGED++VE   +R PF+A+LD+GL RTTTG+++F           ++PHS
Sbjct: 116 DSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHS 175

Query: 522 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 343
           + RF GF ++ K  +AE HR  I G HVADYM  L +E+ ++Y+  FS+++  G++AD++
Sbjct: 176 ESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNL 235

Query: 342 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 199
            A Y+KVH+AIRAD S A   K A K  KR+  K+LTY+ERK  + ++
Sbjct: 236 VATYQKVHSAIRADASPA--AKKAAKPSKRHTAKRLTYDERKQRVADK 281

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>RL5_BOMMO (O76190) 60S ribosomal protein L5|
          Length = 299

 Score =  155 bits (393), Expect = 9e-38
 Identities = 83/180 (46%), Positives = 111/180 (61%), Gaps = 9/180 (5%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPADERR-PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           D  Y G  + TG++++VEP D     FR  LDVGL RTTTG RVF           ++PH
Sbjct: 116 DTLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGRRVFGAMKGAVDGGLNVPH 175

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S KRF G+  + K  +AE+HR +I+G HVA+YMRSL  ++ + ++  FS+YIK G++AD 
Sbjct: 176 SIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADA 235

Query: 345 MEAVYKKVHAAIRADPS-MAKSTKPAPKTHKRYNPKKLTYEER-------KASLVERLNA 190
           +EA+YKK H AIRADPS   K  K      KR+N +KLT  ER       KAS ++RL A
Sbjct: 236 IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQA 295

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>RL5_STYCL (Q26481) 60S ribosomal protein L5|
          Length = 294

 Score =  155 bits (391), Expect = 1e-37
 Identities = 79/163 (48%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPADERR-PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           DE YEG  E  G++F VE  D +   FRA LDVGL RTTTG +VF           DIPH
Sbjct: 115 DEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMKGAADGGLDIPH 174

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S KRF G+  +     AE+HR +I+GGHV++YM+ L +E+ E ++  FS+YIK G++AD 
Sbjct: 175 STKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEAFKRQFSQYIKHGVTADT 234

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERK 217
           +E +Y K HAAIR DP+  K T  A KT KR+N KK+T+ +R+
Sbjct: 235 VEEMYTKAHAAIREDPTPKKKTDFAGKT-KRWNRKKMTFSQRR 276

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>RL5_HELAN (O65353) 60S ribosomal protein L5|
          Length = 297

 Score =  152 bits (384), Expect = 1e-36
 Identities = 80/167 (47%), Positives = 111/167 (66%), Gaps = 2/167 (1%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPADERR-PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           D+ Y G+ E TGE+F+V+P ++    FR  LDVGL+RTTTG RVF           +I H
Sbjct: 116 DKLYIGSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRTTTGARVFGAMKGAVDGGLNILH 175

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S KRF GF  + K  +A++HR++I+G HVA+YMR LA+E+ E Y+  FS+YIK G++AD 
Sbjct: 176 STKRFPGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEEDDEAYKRQFSQYIKLGLNADA 235

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPA-PKTHKRYNPKKLTYEERKASL 208
           +E +YKK H AIRA+P+     K A PK  KR+  KKLT E+R+  +
Sbjct: 236 IEGLYKKAHEAIRANPARKTVAKKAHPK--KRWTEKKLTREQRQGKV 280

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>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)|
          Length = 301

 Score =  151 bits (382), Expect = 2e-36
 Identities = 83/186 (44%), Positives = 113/186 (60%), Gaps = 12/186 (6%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPAD----ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXD 535
           DE ++G  EA GE    E A+    ERRPF+A LDVGL RT+TG RVF            
Sbjct: 116 DETFKGVEEADGEYKLTEAAETDDGERRPFKAFLDVGLARTSTGARVFGAMKGASDGGIF 175

Query: 534 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 355
           IPHS+ RF G+  + + LDAE  +KYI+GGHVA+YM +LAD++ E+Y++ F+ YI+  + 
Sbjct: 176 IPHSENRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADDDEERYKSQFNRYIEDDLE 235

Query: 354 ADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHK--------RYNPKKLTYEERKASLVER 199
           AD +E +Y + HAAIR DP   K+   APK  K        +Y   KLT E+R A + ER
Sbjct: 236 ADGLEDLYAEAHAAIREDP-FKKAESEAPKKTKEEWKAESLKYKKSKLTREQRAAGVQER 294

Query: 198 LNALNN 181
           + AL +
Sbjct: 295 IAALRS 300

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>RL5B_XENLA (P15126) 60S ribosomal protein L5-B|
          Length = 295

 Score =  148 bits (373), Expect = 2e-35
 Identities = 73/169 (43%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           D+ YEG VE TG++++VE  D E   F   LD GL RTTTGN+VF            IPH
Sbjct: 115 DKVYEGQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPH 174

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S KRF G+  + K  + E+HRK+I+  ++A+YMR L +E+ + Y+  FS+YIK G++AD 
Sbjct: 175 STKRFPGYDSESKEFNPEVHRKHIFAQNIAEYMRLLMEEDEDAYKKQFSQYIKNGVAADQ 234

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 199
           +E +YKK HA IR +P   K  K   K  KR+N  KL+ E++K  + ++
Sbjct: 235 LEDIYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKLSLEQKKDRVAQK 282

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>RL5_DUNSA (O22608) 60S ribosomal protein L5|
          Length = 271

 Score =  147 bits (370), Expect = 4e-35
 Identities = 71/154 (46%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
 Frame = -2

Query: 699 EEYEGNVEATGEDFSVEPADER-RPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHS 523
           + Y+G  E  GED++VEP ++  +PF  LLD GL RT+TG++VF           DIPH+
Sbjct: 117 DTYKGQEEPDGEDYNVEPVEDGPKPFYCLLDTGLKRTSTGSKVFAAMKGALDGGLDIPHN 176

Query: 522 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 343
           +KRF G+   +K LD E+ +KYIYGGHVA+Y  ++ +EEPEKYQ HFS Y++  I  D +
Sbjct: 177 EKRFVGYA--DKKLDTEVLQKYIYGGHVAEYQETMQEEEPEKYQAHFSSYVENEIEPDGI 234

Query: 342 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPK 241
           E +YK+VHA IR +P   K  +  P   KR++P+
Sbjct: 235 EDMYKEVHAKIRENPCPPKKERTKPADAKRWSPQ 268

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>RL5A_XENLA (P15125) 60S ribosomal protein L5-A|
          Length = 295

 Score =  147 bits (370), Expect = 4e-35
 Identities = 74/169 (43%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           D+ YEG VE TG++++VE  D E   F   LD GL RTTTGN+VF            IPH
Sbjct: 115 DKVYEGQVEVTGDEYNVESIDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPH 174

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S KRF G+  + K  + E+HRK+I+  +VA+YMR L +E+ + Y+  FS+YIK G++AD 
Sbjct: 175 STKRFPGYDSESKEFNPEVHRKHIFAQNVAEYMRLLMEEDEDAYKKQFSQYIKNGVTADQ 234

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 199
           +E +YKK HA IR +P   K  K   K  KR+N  KL+ E++K  + ++
Sbjct: 235 VEDLYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKLSLEQKKDRVAQK 282

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>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5|
          Length = 296

 Score =  145 bits (365), Expect = 2e-34
 Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 1/169 (0%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           D+ YEG VE TG++++VE  D +   F   LD GL RTTTGN+VF            IPH
Sbjct: 115 DKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 174

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D 
Sbjct: 175 STKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDM 234

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 199
           ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 235 MEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_HUMAN (P46777) 60S ribosomal protein L5|
          Length = 296

 Score =  145 bits (365), Expect = 2e-34
 Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 1/169 (0%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           D+ YEG VE TG++++VE  D +   F   LD GL RTTTGN+VF            IPH
Sbjct: 115 DKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 174

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D 
Sbjct: 175 STKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDM 234

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 199
           ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 235 MEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_CHICK (P22451) 60S ribosomal protein L5|
          Length = 296

 Score =  144 bits (364), Expect = 2e-34
 Identities = 75/169 (44%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPADERR-PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           D+ YEG VE TG++++VE  D +   F   LD GL RTTTGN+VF            IPH
Sbjct: 115 DKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 174

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  I+ D 
Sbjct: 175 STKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNITPDG 234

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 199
           ME +YKK HAAIR +P   K  K   K  KR N  K++  ++K  + ++
Sbjct: 235 MEEMYKKAHAAIRDNPVHEKKPKREVK-KKRVNSTKMSLAQKKDRVAQK 282

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>RL5_RAT (P09895) 60S ribosomal protein L5|
          Length = 296

 Score =  142 bits (359), Expect = 8e-34
 Identities = 73/169 (43%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           D+ YEG VE  G++++VE  D +   F   LD GL RTTTGN+VF            IPH
Sbjct: 115 DKIYEGQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 174

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D 
Sbjct: 175 STKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDM 234

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 199
           ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 235 MEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B|
          Length = 294

 Score =  141 bits (355), Expect = 2e-33
 Identities = 85/183 (46%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
 Frame = -2

Query: 699 EEYEGNVEATGEDFSVEPA--DERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           ++YEG  E  GE F +  A  D  RPF+  LDVGL RT+TG+RVF            IPH
Sbjct: 117 DKYEGVTEPEGE-FELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPH 175

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S  RF GF  + + LD E  RKYIYGGHVA+YM  L D++ E+YQ  FS  I  GI +D 
Sbjct: 176 SPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQ 235

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPA---PKTHKRYNPKKLTYEERKASLVERLNALNNSA 175
           +E +Y + +A IR DPS  KS K A        +Y  +KLT EERK    ER NA    A
Sbjct: 236 LEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQRKLTAEERK----ERFNAKVIEA 291

Query: 174 GAA 166
           G A
Sbjct: 292 GRA 294

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>RL5_MOUSE (P47962) 60S ribosomal protein L5|
          Length = 296

 Score =  141 bits (355), Expect = 2e-33
 Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 1/169 (0%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           D+ YEG VE  G +++VE  D +   F   LD GL RTTTGN+VF            IPH
Sbjct: 115 DKIYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 174

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D 
Sbjct: 175 STKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDM 234

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 199
           ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 235 MEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A|
          Length = 294

 Score =  139 bits (350), Expect = 8e-33
 Identities = 84/183 (45%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
 Frame = -2

Query: 699 EEYEGNVEATGEDFSVEPA--DERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           ++YEG  E  GE F +  A  D  RPF+  LDVGL RT+TG+RVF            IPH
Sbjct: 117 DKYEGVTEPEGE-FELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPH 175

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S  RF GF  + + LD E  RKYIYGGHVA+YM  L D++ E+YQ  FS  I  GI +D 
Sbjct: 176 SPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQ 235

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPA---PKTHKRYNPKKLTYEERKASLVERLNALNNSA 175
           +E +Y + +A IR DPS  KS K A        ++  +KLT EERK    ER NA    A
Sbjct: 236 LEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKHTQRKLTAEERK----ERFNAKVIEA 291

Query: 174 GAA 166
           G A
Sbjct: 292 GRA 294

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>RL5_ANOGA (O44248) 60S ribosomal protein L5|
          Length = 327

 Score =  136 bits (343), Expect = 5e-32
 Identities = 71/153 (46%), Positives = 97/153 (63%), Gaps = 2/153 (1%)
 Frame = -2

Query: 702 DEEYEGNVEATGEDFSVEPADER-RPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           D  Y G  + TGE++ VEP DE    FR  LDVGL RTTTG+RVF           +IPH
Sbjct: 116 DTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDGGLNIPH 175

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S KRF G+  + KS +AE+HR +I+G HVA+YMR+L +E+ E ++  FS+YI  GI ADD
Sbjct: 176 SVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLGIKADD 235

Query: 345 MEAVYKKVHAAIR-ADPSMAKSTKPAPKTHKRY 250
           +E +YK  HA+IR   PS     + +P++  R+
Sbjct: 236 IENIYKNAHASIRKIPPSRRNPRRRSPRSGGRW 268

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>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S|
           RNA-binding protein)
          Length = 296

 Score =  131 bits (330), Expect = 2e-30
 Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 6/178 (3%)
 Frame = -2

Query: 702 DEEYEGNVEATGE-DFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPH 526
           DE Y+G  E  GE + +    D  RPF+  LD+GL RTTTG RVF            +PH
Sbjct: 115 DETYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPH 174

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           S+ RF G+  + + +D E+ R YI+GGHV+ YM  LAD++ E++   F  Y+   I AD 
Sbjct: 175 SENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADS 234

Query: 345 MEAVYKKVHAAIRADPSMAKSTKPAPKTH-----KRYNPKKLTYEERKASLVERLNAL 187
           +E +Y   H AIRADP+   + K   K       K+Y   KL+ EER A +  ++ AL
Sbjct: 235 LEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEERAARVAAKIAAL 292

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>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 34/113 (30%), Positives = 59/113 (52%)
 Frame = -2

Query: 639 ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRK 460
           ER   RA++D+GL R   G+RVF           DIPH           E+ L  E    
Sbjct: 99  ERGIERAVIDIGLHRPVRGSRVFAMLKGALDAGMDIPHG----------EEVLPPEDR-- 146

Query: 459 YIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRAD 301
            I G H+A+  R + +E+PE+Y+  FS+Y+++G+  +++   +++V + I  +
Sbjct: 147 -IRGEHIANLARQIKEEDPEEYERRFSKYLERGLKPEELPEHFEEVKSKIEEE 198

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>RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P|
          Length = 205

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 35/112 (31%), Positives = 51/112 (45%)
 Frame = -2

Query: 645 ADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIH 466
           A  RR   A+LD+GL R   G RVF            IPH ++       DE        
Sbjct: 93  ARARRVEEAILDIGLHRPAPGARVFAVLKGALDAGLKIPHGEEVLP----DEDR------ 142

Query: 465 RKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 310
              I G HVA+Y   L +E PE Y+  FS Y+++G+  + +   +++V   I
Sbjct: 143 ---IKGKHVAEYAEKLKEENPEAYKARFSRYLQRGLEPEKLPEHFEEVKKKI 191

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>RL18_METJA (P54044) 50S ribosomal protein L18P|
          Length = 195

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 30/104 (28%), Positives = 53/104 (50%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LD+GL R T GN +F           +IPH           E+ L +E   + I G H
Sbjct: 101 AVLDIGLHRATKGNAIFAILKGALDAGMEIPHG----------EEILPSE---ERIRGEH 147

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 310
           +  Y   L +++ E+Y+  FS+Y++KG+  + +   ++++ A I
Sbjct: 148 IKAYAEMLKEQDEERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191

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>RL18_AERPE (Q9YF94) 50S ribosomal protein L18P|
          Length = 214

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 31/104 (29%), Positives = 52/104 (50%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LDVGL +   G+RVF           +IPHS++   G   DE+          +   H
Sbjct: 102 AVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG---DER----------VRCEH 148

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 310
           +A +  +L +E  E YQ  FS Y+ +G++ +++    ++V  AI
Sbjct: 149 IAQWAEALKEENAELYQRQFSRYLDRGLNPEELPGHVEEVKKAI 192

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>RL18_METMP (Q6LXD4) 50S ribosomal protein L18P|
          Length = 193

 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 33/93 (35%), Positives = 48/93 (51%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LD GL R T G  +F           DIPH DK  A    DE+ L+         G H
Sbjct: 101 AVLDKGLHRATKGAAIFAVLKGALDAGMDIPHGDKIIA----DEERLN---------GTH 147

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDM 343
           V +Y  SL  E+ + Y+  FS+Y++KG++ +D+
Sbjct: 148 VKNYAESLK-EDADAYKKQFSKYLEKGLNPEDL 179

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>RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P|
          Length = 203

 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 30/104 (28%), Positives = 51/104 (49%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LD+GL     G+ VF           ++PHS + F            E +R  I G H
Sbjct: 102 AILDIGLHPPVRGSSVFAVLKGAVDAGLNVPHSPEIFP-----------EDYR--IRGEH 148

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 310
           +A+Y R L +++ EK++  F  Y++KG+  + +   + +V A I
Sbjct: 149 IAEYARMLKEQDEEKFRRQFGGYLEKGLDPEKLPEHFDEVKARI 192

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>RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P|
          Length = 201

 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 29/104 (27%), Positives = 53/104 (50%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LD+GL   T G+ +F           ++PHS++ +            E +R  I G H
Sbjct: 102 AILDIGLHPPTRGSSIFAVLKGAVDAGLNVPHSEEIYP-----------EDYR--INGEH 148

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 310
           +A+Y ++L +E+   Y+  FS Y+ KG+  + +   +++V A I
Sbjct: 149 IANYAKALKEEDEALYRKQFSGYLVKGLEPEKLPEHFEEVKAKI 192

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>RL18_PYRHO (O59438) 50S ribosomal protein L18P|
          Length = 203

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 27/104 (25%), Positives = 52/104 (50%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LD+GL     G+ +F           ++PHS + F            E +R  I G H
Sbjct: 102 AILDIGLHPPVRGSSIFAVLKGAIDAGLNVPHSPEIFP-----------EDYR--IRGEH 148

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 310
           +A+Y R L +++ ++++  F  Y++KG+  + +   +++V A I
Sbjct: 149 IAEYARMLKEQDEDRFRRQFGGYLEKGLDPEKLPEHFEEVKARI 192

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>RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)|
          Length = 203

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 29/104 (27%), Positives = 50/104 (48%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LD+GL     G+ VF           ++PHS + F     DE           I G H
Sbjct: 102 AILDIGLHPPVRGSSVFAVLKGAVDAGLNVPHSPEIFP----DEYR---------IRGEH 148

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 310
           +A+Y + L +++ EK++  F  Y+ KG+  + +   +++V A I
Sbjct: 149 IAEYAKMLKEQDEEKFRRQFGGYLVKGLDPEKLPEHFEEVKARI 192

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>RL18_SULTO (Q975J9) 50S ribosomal protein L18P|
          Length = 196

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 28/106 (26%), Positives = 50/106 (47%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+ D+GL     G+R+F            IP  D    G K+D            I G H
Sbjct: 102 AVADIGLFVPVKGSRIFTAIKGAIDAGLSIPVGD---LGIKEDR-----------IKGVH 147

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRA 304
           +A Y + L  E PE ++  FS+Y+++G+   D+ + ++++   I++
Sbjct: 148 IASYAQKLEAENPELFKRLFSKYLERGLHPKDLPSHFEEILNKIKS 193

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>RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P|
          Length = 195

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 30/104 (28%), Positives = 51/104 (49%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LD+G  ++T GN ++           +IPHS          E  L +E     I G H
Sbjct: 101 AVLDIGRYKSTKGNALYAVLKGALDAGLNIPHS----------ETILPSE---DRIRGEH 147

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 310
           +A+Y + L + E E Y+  FS Y+K+G+  + +   +++V   I
Sbjct: 148 IANYAKMLKENE-ELYKKQFSRYLKEGLDPEQLPNHFEEVKQKI 190

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>RL18_METVA (P14033) 50S ribosomal protein L18P|
          Length = 195

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 30/104 (28%), Positives = 51/104 (49%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LD GL R T G  +F           DIP  ++  A    DE+ L+         G H
Sbjct: 103 AILDKGLHRATKGAAIFAVLKGALDAGMDIPCGEEIIA----DEERLN---------GTH 149

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 310
           +  Y   L ++E E Y+  FS+Y++KG++ +D+   ++++   I
Sbjct: 150 IKQYAELLKEDE-EAYKKQFSKYLEKGLNPEDLPEHFEELKGKI 192

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>RL18_SULSO (Q9UX88) 50S ribosomal protein L18P|
          Length = 199

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/114 (23%), Positives = 48/114 (42%)
 Frame = -2

Query: 645 ADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIH 466
           A +R     + D+GL   + GNRVF            IP                D  I 
Sbjct: 97  AIKRGVTECVADIGLHVPSKGNRVFYVIKGAIDAGLKIPIG--------------DISIE 142

Query: 465 RKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRA 304
              I G H+A Y   L  E  + Y   FS Y+++G++ +++ + ++++   I++
Sbjct: 143 NDRIKGEHIAKYAEKLKSENSDLYSKLFSRYLQRGLNPENLPSHFEEILNKIKS 196

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>RL18_METTH (O26130) 50S ribosomal protein L18P|
          Length = 192

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 28/104 (26%), Positives = 47/104 (45%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LD+GL     G++VF           ++PH +        DE           I G H
Sbjct: 101 AVLDIGLRPAIRGSKVFAALKGAVDAGLNVPHGE----SVLPDESR---------IRGEH 147

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 310
           + +Y  SL +EE  K    FS+Y+++G+S  D+   + ++   I
Sbjct: 148 IMEYAESLDEEELRK---RFSKYLERGLSPVDLPEHFDEIKKRI 188

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>RL18_ARCFU (O28373) 50S ribosomal protein L18P|
          Length = 189

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 28/95 (29%), Positives = 41/95 (43%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LD+GL   T G+RVF           ++PHSD+      +             I G H
Sbjct: 103 AVLDIGLHTPTRGSRVFAVLRGAVEGGLEVPHSDEVLPDDSR-------------IRGEH 149

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEA 337
           +A Y     +  PE+    F EY K+G+   D+ A
Sbjct: 150 IAAYY----EMNPER----FGEYEKRGLKPSDLPA 176

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>RL18_SULAC (O05640) 50S ribosomal protein L18P|
          Length = 197

 Score = 37.7 bits (86), Expect = 0.034
 Identities = 24/88 (27%), Positives = 36/88 (40%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+ D+GL     G R+F            +P  D    G  KD            + G H
Sbjct: 102 AVSDIGLFVPVKGGRIFAVIKGAIDAGLKVPVGD---LGKLKDR-----------VNGSH 147

Query: 441 VADYMRSLADEEPEKYQTHFSEYIKKGI 358
           ++ Y + L +E  E Y   FS YI++G+
Sbjct: 148 ISAYAQKLKNENQELYNKLFSSYIQRGL 175

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>RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18) (HHal18)|
           (HL13)
          Length = 182

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
 Frame = -2

Query: 621 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 442
           A+LD+GL   T G++VF           D+PH+D   A + +               G H
Sbjct: 100 AVLDIGLNTATPGSKVFAIQEGAIDAGLDVPHNDSVLADWSRTR-------------GEH 146

Query: 441 VADYMRSL------ADEEPEKYQTHFSE 376
           +A+Y  SL       D +      HF E
Sbjct: 147 IAEYAESLDEPLYSGDFDATALPAHFDE 174

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>RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)|
          Length = 186

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 25/81 (30%), Positives = 35/81 (43%)
 Frame = -2

Query: 645 ADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIH 466
           A E     A+LD+GL   T G++VF           DIPH+D   A +++          
Sbjct: 92  AQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTR-------- 143

Query: 465 RKYIYGGHVADYMRSLADEEP 403
                G H+A+Y   L  EEP
Sbjct: 144 -----GAHIAEYDEQL--EEP 157

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>ZN674_HUMAN (Q2M3X9) Zinc finger protein 674|
          Length = 581

 Score = 33.5 bits (75), Expect = 0.64
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -2

Query: 393 QTHFSEYIKKGISADDMEAVYKKVHAAIR---ADPSMAKSTKPAPKTHKRYNPKKLTYE 226
           +TH  +   KGI       +Y+++H + +   ++   A   KP+P  H R + K+  YE
Sbjct: 328 KTHIRQAFYKGIKCTTSSLIYQRIHTSEKPQCSEHGKASDEKPSPTKHWRTHTKENIYE 386

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>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 15/102 (14%)
 Frame = +3

Query: 423 TSCSQQHALHRCTCGESQHPETSRPS*NQQISC------------HCGECPDHRPKLP*V 566
           TSCS QH+            ++S P+ +  +S             H    P   P  P  
Sbjct: 328 TSCSYQHSPSSTVTSHPHSNQSSLPNNHSGLSATGSNSVAQVSLSHPQMHPQPSPHTP-- 385

Query: 567 HQTHGFQS*S**DQHPRAHGKASSHQQ---AQQRSPHQWPQH 683
           H+ HG        QHP  H +  S  Q   +Q   PHQ  QH
Sbjct: 386 HRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQHPPPHQHIQH 427

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>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +2

Query: 536 SRPPSKAPLSAPNTRFPVVVLIRPTSKSARKGLLSSAGSTEKSS----PVASTLPSYSSS 703
           S PP+ +   AP  RFP       +S S+     SS+ S+  SS    P +  LPSY  S
Sbjct: 357 SLPPASSSAPAPPMRFPY------SSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHS 410

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>MYF6_FUGRU (Q6SYV5) Myogenic factor 6 (Myf-6) (Muscle-specific regulatory|
           factor 4)
          Length = 239

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +1

Query: 529 GNVQTTVQSSLKCTKHTVSSRSPDKTNIQE 618
           GN +++  SSL C    VSS S DKTN+++
Sbjct: 205 GNCESSATSSLLCLSSIVSSISDDKTNLRQ 234

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>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +2

Query: 536 SRPPSKAPLSAPNTRFPVVVLIRPTSKSARKGLLSSAGSTEKSS----PVASTLPSYSSS 703
           S PP+ +   AP  RFP       +S S+     SS+ S+  SS    P +  LPSY  S
Sbjct: 358 SLPPASSSAPAPPMRFPY------SSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHS 411

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>SRYD_DROME (P07664) Serendipity locus protein delta|
          Length = 433

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = -2

Query: 525 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 346
           +D  F    KD++  D EI R+++             DEE E+      E+I + +   D
Sbjct: 126 ADALFVELVKDQEESDTEIKREFV-------------DEEEEEDDDDDDEFICEDVDVGD 172

Query: 345 MEAVYKK 325
            EA+Y K
Sbjct: 173 SEALYGK 179

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>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3|
          Length = 622

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 30/97 (30%), Positives = 36/97 (37%), Gaps = 5/97 (5%)
 Frame = +3

Query: 408 PHLLATSCSQQHALHRCTCGESQHPETS--RPS*NQQISCHCGECPDHRPKLP*VHQTHG 581
           PH   +S S  H     T G +   + S   P  + Q S H    P HRP        HG
Sbjct: 342 PHSNQSSLSNSHGSGLNTTGSNSVAQVSLSHPQMHPQPSPH----PPHRP--------HG 389

Query: 582 FQS*S**DQHPRAHGKASSHQQA---QQRSPHQWPQH 683
                    HP  H +  S  Q+   Q  SPHQ  QH
Sbjct: 390 LPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQH 426

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>FPRB_MYCLE (O33064) Probable ferredoxin/ferredoxin--NADP reductase (EC|
           1.18.1.2) (FNR)
          Length = 555

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -2

Query: 687 GNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNR 577
           GN  ATG +FSV   +E R F    D GL+ T+ G R
Sbjct: 381 GNQRATGVEFSVTGTEESRRF----DAGLVLTSVGYR 413

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>ZEP1_HUMAN (P15822) Zinc finger protein 40 (Human immunodeficiency virus type I|
            enhancer-binding protein 1) (HIV-EP1) (Major
            histocompatibility complex-binding protein 1) (MBP-1)
            (Positive regulatory domain II-binding factor 1)
            (PRDII-BF1)
          Length = 2717

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
 Frame = +1

Query: 538  QTTVQSSLKCTKHTVSSRSP------DKTNIQERTERP 633
            + T  S LKCT +    +SP      DK NIQE+++RP
Sbjct: 1878 ENTHLSPLKCTDNNQERKSPGVKNQGDKVNIQEQSQRP 1915

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>JHD2A_MOUSE (Q6PCM1) JmjC domain-containing histone demethylation protein 2A|
           (EC 1.14.11.-) (Jumonji domain-containing protein 1A)
          Length = 1323

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +1

Query: 502 ETSKSLVTVGNVQTTV--QSSLKCTKHTVSSRSPDKTNIQERTERPPLI 642
           E S S+  V +V TTV  +  L CT  T SS+ P + N  +    PP I
Sbjct: 281 EASPSMCPVQSVPTTVFKEILLGCTAATPSSKDPRQQNTPQAANSPPNI 329

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>UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstream binding|
           factor 1-A) (UBF-1-A) (xUBF-1)
          Length = 677

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -2

Query: 435 DYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPK 265
           DY + LA+++   Y+T F  ++ KG+S+ D  A YK+ ++  R   S AK   P  K
Sbjct: 531 DYYKKLAEDQQRVYRTQFDTWM-KGLSSQD-RAAYKEQNSNKR--KSTAKIQVPVAK 583

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>SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subunit|
           (Epithelial Na+ channel beta subunit) (Beta ENaC)
           (Nonvoltage-gated sodium channel 1 beta subunit) (SCNEB)
           (Beta NaCH)
          Length = 638

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 384 SEFGTSRVPHLLATSCSQQHALHRCTCGESQHP 482
           S++ T+        SC Q H +H C+CG   +P
Sbjct: 373 SDYNTTYSIQACLHSCFQDHMIHNCSCGHYLYP 405

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>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +2

Query: 539 RPPSKAPLSAPNTR-----FPVVVLIRPTSKSARKGLLSSAGSTEKSSPVASTLPSYSS 700
           R PS++P  +PN        P V L RP ++ A  G   S     + SPVA+     SS
Sbjct: 347 RSPSRSPSRSPNRSPCVPPAPEVALPRPVTQGAGPGKCPSPNLQTQESPVATATSPTSS 405

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>NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated protein 1)|
           (P125Nap1) (NAP of plants)
          Length = 1359

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
 Frame = +1

Query: 322 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLL 501
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SIDV  V L    +L L 
Sbjct: 291 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDVAMVVLKENLVLSLF 348

Query: 502 ETSKSLVTVGNVQTTVQSSLKCTKHTVSSRSPDKT-----NIQERTERPPLISRLNREVL 666
                L+        +   L+  +   S R+  K      N+ ++ E+  ++  ++ + L
Sbjct: 349 RDEYILLHENYQLYVLPKVLESKRMAKSGRTKQKEADLEYNVAKQVEK--MLMEVHEQAL 406

Query: 667 TS 672
            S
Sbjct: 407 VS 408

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>NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (AtNAP1)|
           (AtNAP125) (p125Nap1) (NAP of plants) (ARP2/3 regulatory
           protein subunit NAPP) (Protein GNARLED)
          Length = 1425

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +1

Query: 322 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLL 501
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SID+  V L    ++ L 
Sbjct: 302 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDIALVVLKENLVVTLF 359

Query: 502 ETSKSL 519
               SL
Sbjct: 360 RDEVSL 365

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>CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (Solute carrier|
           family 7 member 3) (Cationic amino acid transporter y+)
          Length = 618

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 385 VSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLLETSKSLVT 525
           +S  L G ++   PHV++  P    LA+ L +  LLVL  +  +LVT
Sbjct: 144 ISRTLKGTILLKMPHVLAEYPDFFALALVLLLTGLLVLGASKSALVT 190

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>RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)|
          Length = 101

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -2

Query: 375 YIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 199
           Y +K +   D        HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 30  YARKRLVIQDKNKYNTPAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 87

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>ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 928

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
 Frame = -2

Query: 528 HSDKRFAGFKKDEKSLDAEIHRKYIYGG-------HVADYMRSLADEEPEKYQTHFSEYI 370
           H D  F G     +SL       Y  GG       +   +  + AD    +Y T F++ I
Sbjct: 350 HGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRASRYSTEFAKII 409

Query: 369 KKGI---SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRY 250
              I   + DD+EAV K  + A+       K        +++Y
Sbjct: 410 AAPILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKY 452

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>VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein VTA1|
           (VPS20-associated protein 1)
          Length = 330

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 25/84 (29%), Positives = 40/84 (47%)
 Frame = -2

Query: 417 ADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKK 238
           AD   E+ QT   +  +  I+ D+ + V K+V     + PS     +PA   HK Y   +
Sbjct: 231 ADSVNEEEQT--VDKNEDAITKDEQQVVKKEVDLTRPSAPS-----EPAAAEHKSYTKDE 283

Query: 237 LTYEERKASLVERLNALNNSAGAA 166
           LT    +AS +E++  L   A +A
Sbjct: 284 LTKIMDRASKIEQIQKLAKYAISA 307

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>YBX5_SCHPO (Q10203) Hypothetical protein C17D1.05 in chromosome II|
          Length = 368

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
 Frame = +2

Query: 473 SASRDF--SSFLKPANL--LSLWGMSRPPSKAPLSA---------PNTRFPVVVLIRPTS 613
           SAS  F  SSF++ AN+  LS+    RP S AP+            N+  P    +RP +
Sbjct: 220 SASNSFTPSSFIESANMESLSIPSRRRPSSIAPIGTRPSRKEIAFSNSSTPTDQTLRPPN 279

Query: 614 KSARKGLLSSAGSTEKSSPVASTLPSYSSS 703
             A  G  +   +    S VA +  S  SS
Sbjct: 280 PPAANGNATPVTAVNNVSAVADSPQSTGSS 309


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,232,246
Number of Sequences: 219361
Number of extensions: 1775882
Number of successful extensions: 6688
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 6199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6643
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7026286028
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result