| Clone Name | rbaal1d08 |
|---|---|
| Clone Library Name | barley_pub |
>YFC8_YEAST (P43569) Probable ATP-dependent transporter YFL028C| Length = 289 Score = 51.2 bits (121), Expect = 6e-07 Identities = 24/63 (38%), Positives = 37/63 (58%) Frame = -1 Query: 401 DVLAKXNLXTYLKKECXEQGATIIYATHIFDGLDDWPTLXVYVAHGKLQLALPLEKVXEM 222 DV+A+ L +LK E + +++YATHIFDGL WP ++ GK+ L +K E Sbjct: 180 DVIARARLLEFLKWETETRRCSVVYATHIFDGLAKWPNQVYHMKSGKIVDNLDYQKDVEF 239 Query: 221 SQL 213 S++ Sbjct: 240 SEV 242
>RELN_HUMAN (P78509) Reelin precursor (EC 3.4.21.-)| Length = 3460 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 Query: 296 NHPGHRRYVWHR*LLHLVPXIPS 364 NH GH R VW H++P +PS Sbjct: 544 NHQGHNRNVWAVDFFHVLPVLPS 566
>MODC_PHOLL (Q7N6R3) Molybdenum import ATP-binding protein modC (EC 3.6.3.29)| Length = 354 Score = 29.3 bits (64), Expect = 2.3 Identities = 20/65 (30%), Positives = 30/65 (46%) Frame = -1 Query: 401 DVLAKXNLXTYLKKECXEQGATIIYATHIFDGLDDWPTLXVYVAHGKLQLALPLEKVXEM 222 D+ K L YL+K E I+Y +H D + + V +GK++ LE+V Sbjct: 160 DLPRKRELLPYLEKLSGEVNIPILYVSHNLDEILRLAENVLVVDNGKVRATGKLEEVWSS 219 Query: 221 SQLSL 207 S L L Sbjct: 220 SALRL 224
>RELN_RAT (P58751) Reelin precursor (EC 3.4.21.-)| Length = 3462 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 Query: 296 NHPGHRRYVWHR*LLHLVPXIPS 364 NH GH + VW H++P +PS Sbjct: 546 NHQGHNQNVWAVDFFHVLPILPS 568
>RELN_CHICK (O93574) Reelin (EC 3.4.21.-) (Fragment)| Length = 3209 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 Query: 296 NHPGHRRYVWHR*LLHLVPXIPS 364 +H GH R VW H++P +PS Sbjct: 292 SHQGHNRNVWAVDYFHVLPVLPS 314
>RBLL1_RHOPA (Q6N7T7) Ribulose bisphosphate carboxylase-like protein 1| (RuBisCO-like protein) Length = 368 Score = 27.3 bits (59), Expect = 8.9 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = -1 Query: 368 LKKECXEQGATIIYATHIFDGLDD 297 +++ C +GA ++YA H+ LDD Sbjct: 187 MREACAVRGAAMLYAPHVSGSLDD 210
>HAT3_ARATH (P46602) Homeobox-leucine zipper protein HAT3 (HD-ZIP protein 3)| Length = 315 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +2 Query: 230 SPFLMAALVATSHEQHXQXELANHPGHRRYVW 325 +P +A+ ++SH QH Q NHP + W Sbjct: 28 NPMPLASYASSSHMQHMQQSNYNHPQKIQNTW 59
>NRTC_SYNP7 (P38045) Nitrate transport ATP-binding protein nrtC| Length = 659 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -1 Query: 401 DVLAKXNLXTYLKKECXEQGATIIYATHIFD 309 D L + NL L + C E G T + TH D Sbjct: 170 DALTRGNLQEQLMRICQEAGVTAVMVTHDVD 200
>MODC_MANSM (Q65SW3) Molybdenum import ATP-binding protein modC (EC 3.6.3.29)| Length = 352 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/57 (31%), Positives = 24/57 (42%) Frame = -1 Query: 401 DVLAKXNLXTYLKKECXEQGATIIYATHIFDGLDDWPTLXVYVAHGKLQLALPLEKV 231 D+ K L YL+K E I+Y TH D L V + GK+ LE + Sbjct: 161 DLPRKRELLAYLEKLSQEINIPILYVTHSLDELFRLADFVVLLDEGKVAAFDSLENL 217 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,499,293 Number of Sequences: 219361 Number of extensions: 529583 Number of successful extensions: 1311 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1272 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1311 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)