ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24l11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X86903.1|TAFKBP70 T.aestivum mRNA for peptidylprolyl cis-tra... 636 e-179
2gb|DQ175904.1| Hordeum vulgare subsp. vulgare clone 28-52A-LB fl... 422 e-115
3ref|XM_483423.1| Oryza sativa (japonica cultivar-group), mRNA 266 7e-68
4dbj|AK103172.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 7e-68
5gb|AY104504.1| Zea mays PCO127462 mRNA sequence 167 5e-38
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
7dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
8ref|XM_472023.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
9gb|AF140495.2| Oryza sativa (japonica cultivar-group) FK506-bind... 56 1e-04
10dbj|AK100844.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
11emb|CR788232.9| Zebrafish DNA sequence from clone DKEY-283M16 in... 48 0.032
12gb|BT012788.1| Lycopersicon esculentum clone 113780F, mRNA sequence 46 0.13
13emb|Y07636.1|TAFKBP77 T.aestivum mRNA for peptidylprolyl isomerase 44 0.51
14emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chr... 44 0.51
15gb|U95119.1|MMU95119 Mus musculus Pafaha/Lis1 exon 3, complete s... 44 0.51
16gb|AC104964.12| Homo sapiens chromosome 8, clone RP11-981G7, com... 42 2.0
17emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4,... 42 2.0
18gb|AC099564.2| Homo sapiens chromosome 1 clone RP11-359A17, comp... 42 2.0
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
20dbj|AK173395.1| Ciona intestinalis cDNA, clone:cilv028p09, full ... 42 2.0
21gb|U83594.1|OPU83594 Ovine papillomavirus 1 complete genome 42 2.0
22gb|AC157556.12| Mus musculus chromosome 1, clone RP24-267A19, co... 40 7.9
23ref|XM_465763.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
24ref|NM_080396.1| Rattus norvegicus transient receptor potential ... 40 7.9
25ref|NM_053434.1| Rattus norvegicus transient receptor potential ... 40 7.9
26gb|AC146278.3| Pan troglodytes BAC clone CH251-26J9 from X, comp... 40 7.9
27gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete se... 40 7.9
28emb|AL731897.12| Human DNA sequence from clone RP11-284G10 on ch... 40 7.9
29emb|AL590664.8| Human DNA sequence from clone RP11-66C24 on chro... 40 7.9
30emb|AL357312.8| Human DNA sequence from clone RP11-390F10 on chr... 40 7.9
31emb|AL356277.18| Human DNA sequence from clone RP11-554D15 on ch... 40 7.9
32emb|AL138959.20| Human DNA sequence from clone RP11-214O11 on ch... 40 7.9
33emb|AL138798.10| Human DNA sequence from clone RP1-82G18 on chro... 40 7.9
34gb|AC011601.21| Homo sapiens 12 BAC RP11-498M15 (Roswell Park Ca... 40 7.9
35gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome... 40 7.9
36emb|BX927303.11| Zebrafish DNA sequence from clone CH211-67L13 i... 40 7.9
37emb|AL669931.9| Mouse DNA sequence from clone RP23-31D18 on chro... 40 7.9
38gb|AC005293.1| Homo sapiens 12p13.3 PAC RPCI5-977L1 (Roswell Par... 40 7.9
39gb|AC113169.2| Homo sapiens chromosome 3 clone RP11-322K13, comp... 40 7.9
40gb|AC112213.2| Homo sapiens chromosome 3 clone RP11-223D18, comp... 40 7.9
41gb|AC073588.3| Homo sapiens chromosome 10 clone RP11-96N16, comp... 40 7.9
42gb|AC118456.2| Homo sapiens chromosome 5 clone CTD-2288B6, compl... 40 7.9
43gb|AC079264.23| Homo sapiens Xp BAC RP11-315B16 (Roswell Park Ca... 40 7.9
44gb|AC008697.7| Homo sapiens chromosome 5 clone CTB-70D3, complet... 40 7.9
45gb|AE010179.1| Pyrococcus furiosus DSM 3638, section 54 of 173 o... 40 7.9
46gb|AC097066.2| Homo sapiens chromosome 1 clone RP11-575B7, compl... 40 7.9
47gb|AC010240.7| Homo sapiens chromosome 5 clone CTC-350I8, comple... 40 7.9
48gb|AC092333.2| Homo sapiens chromosome 5 clone RP11-195A20, comp... 40 7.9
49gb|AF421368.1|AF421368 Rattus norvegicus transient receptor pote... 40 7.9
50gb|AF421367.1|AF421367 Rattus norvegicus transient receptor pote... 40 7.9
51gb|AF421366.1|AF421366 Rattus norvegicus transient receptor pote... 40 7.9
52gb|AF421365.1|AF421365 Rattus norvegicus transient receptor pote... 40 7.9
53gb|AF421364.1|AF421364 Rattus norvegicus transient receptor pote... 40 7.9
54gb|AF421363.1|AF421363 Rattus norvegicus transient receptor pote... 40 7.9
55gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, compl... 40 7.9
56gb|AC092796.2| Homo sapiens chromosome 3 clone RP11-11F9, comple... 40 7.9
57gb|AC008378.6| Homo sapiens chromosome 5 clone CTC-209H22, compl... 40 7.9
58gb|AC010387.5| Homo sapiens chromosome 5 clone CTD-2074D8, compl... 40 7.9
59gb|AC027684.3| Homo sapiens chromosome 16 clone RP11-148F10, com... 40 7.9
60gb|AC092795.2| Homo sapiens chromosome 3 clone RP11-9J18, comple... 40 7.9
61emb|AJ549502.2|HSA549502 Homo sapiens peptidylarginine deiminase... 40 7.9
62gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 7.9
63gb|AC159023.4| Pan troglodytes BAC clone CH251-506L16 from chrom... 40 7.9
64dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
65gb|AC008126.9|AC008126 Homo sapiens 12 BAC RPCI11-90E9 (Roswell ... 40 7.9
66gb|AC093515.4| Homo sapiens chromosome 16 clone CTD-2535I10, com... 40 7.9
67gb|AC012499.8| Homo sapiens BAC clone RP11-428I14 from 2, comple... 40 7.9
68gb|AF288408.1|AF288408 Rattus norvegicus transient receptor pote... 40 7.9
69gb|AF288407.1|AF288407 Rattus norvegicus transient receptor pote... 40 7.9
70gb|AC104788.5| Homo sapiens BAC clone RP11-128I4 from 2, complet... 40 7.9
71gb|AC073612.17| Homo sapiens 12 BAC RP11-293I14 (Roswell Park Ca... 40 7.9
72gb|AC159743.4| Pan troglodytes BAC clone CH251-267D14 from chrom... 40 7.9
73dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisu... 40 7.9
74dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
75dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
76dbj|AK073233.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
77gb|AC144798.4| Mus musculus BAC clone RP24-364A24 from 14, compl... 40 7.9
78emb|CR352309.9| Zebrafish DNA sequence from clone DKEYP-72H1 in ... 40 7.9
79dbj|AP000999.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.9
80dbj|AP002853.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.9
81dbj|AP006293.2| Homo sapiens genomic DNA, chromosome 9 clone:RP1... 40 7.9
82dbj|AP002795.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.9
83emb|AL935193.9| Zebrafish DNA sequence from clone CH211-209H11, ... 40 7.9
84dbj|AB008889.2| Rattus norvegicus TRP mRNA for truncated form of... 40 7.9
85dbj|AB020874.1| Homo sapiens genomic DNA of 9q32 anti-oncogene o... 40 7.9 
>emb|X86903.1|TAFKBP70 T.aestivum mRNA for peptidylprolyl cis-trans isomerase, FK506
          Length = 2027

 Score =  636 bits (321), Expect = e-179
 Identities = 529/590 (89%), Gaps = 15/590 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacaaactataatatgc-aaggtctaaacatgaa--cttttaaacaagaaaaattatcgc 57
            |||| |||||||||||| |||||||||||||| |   || |  |||||||||| ||| ||
Sbjct: 1990 cacacactataatatgcaaaggtctaaacatgcattgttcttgacaagaaaaaatattgc 1931

                                                                        
Query: 58   ctggcaccctc--aactgaaatttctctagtttttagcaactcccaagcatatgggtctt 115
            |||||| ||||  ||||||||||||||||||||||||||||| ||||||| ||| ||  |
Sbjct: 1930 ctggcaacctcaaaactgaaatttctctagtttttagcaact-ccaagcacatgcgtggt 1872

                                                                        
Query: 116  ctaaccaacc---agagctaagcagacaagctggcccttccttcagcacactccgggact 172
            ||||||| ||   |||||| ||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 1871 ctaaccagcccatagagctgagcagacaagctggcccttccgtgagcgcactccgggact 1812

                                                                        
Query: 173  ccgatccttgctttgggtattgctccagttcaagctttctggctttcttctgctgaaggc 232
            || |||||| ||||||||| ||||||||||||||||||   |||||||||||||||||||
Sbjct: 1811 cctatccttcctttgggtactgctccagttcaagcttt---gctttcttctgctgaaggc 1755

                                                                        
Query: 233  ctggtcatcttagaaaacatattgctgtagaattaggcgtccttcttgttgatttctttg 292
             ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||
Sbjct: 1754 ttggtcatcttagagaacatattgctgtagaatttggcatccttcttgttgatttccttg 1695

                                                                        
Query: 293  atcttttccttcagggtcttgtatgtcaacttcacatccctgttttcaggatngatttcc 352
            |||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 1694 atcttttccttcagagtcttgtatgtcaacttcacatccctgttttcaggatctatttcc 1635

                                                                        
Query: 353  agatccttcttaatgtcaacctctgctaactctaggtccgcaagctgagtgtaggcttga 412
            |   ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1634 aatgccttcttaatgtcgacctctgctaactctaggtccgcaagctgagtgtaagcttga 1575

                                                                        
Query: 413  gaccttctgtacaaagccttgacatttcggctgtccagttccagaaatttggtgcaaagc 472
            | |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||
Sbjct: 1574 gcccttctgtacaaagccttaacatttcggctgtccagttccagaaccttggtgcaaagc 1515

                                                                        
Query: 473  ttntcggattntcttatagtctttatagcttcagcttgcaggcagcattgtttaagttgc 532
            || || | ||  ||||||||||||  ||||||| ||||||||||||||||||||||||||
Sbjct: 1514 ttttcagcttg-cttatagtcttt-cagcttcaacttgcaggcagcattgtttaagttgc 1457

                                                              
Query: 533  aggtgaatnttcanttgcttggattgctttttctcatcctcactgaacga 582
            ||||| || |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1456 aggtg-atcttcagttgcttggattgctttttctcatcctcactgaacga 1408
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>gb|DQ175904.1| Hordeum vulgare subsp. vulgare clone 28-52A-LB flanking T-DNA
           insertion sequence
          Length = 699

 Score =  422 bits (213), Expect = e-115
 Identities = 213/213 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacaaactataatatgcaaggtctaaacatgaacttttaaacaagaaaaattatcgcctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 cacaaactataatatgcaaggtctaaacatgaacttttaaacaagaaaaattatcgcctg 204

                                                                       
Query: 61  gcaccctcaactgaaatttctctagtttttagcaactcccaagcatatgggtcttctaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gcaccctcaactgaaatttctctagtttttagcaactcccaagcatatgggtcttctaac 264

                                                                       
Query: 121 caaccagagctaagcagacaagctggcccttccttcagcacactccgggactccgatcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaccagagctaagcagacaagctggcccttccttcagcacactccgggactccgatcct 324

                                            
Query: 181 tgctttgggtattgctccagttcaagctttctg 213
           |||||||||||||||||||||||||||||||||
Sbjct: 325 tgctttgggtattgctccagttcaagctttctg 357



 Score =  234 bits (118), Expect = 3e-58
 Identities = 121/122 (99%)
 Strand = Plus / Plus

                                                                       
Query: 214 gctttcttctgctgaaggcctggtcatcttagaaaacatattgctgtagaattaggcgtc 273
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 428 gctttcttctgctgaaggcctggtcatcttagaaaacatattgctgtagaatttggcgtc 487

                                                                       
Query: 274 cttcttgttgatttctttgatcttttccttcagggtcttgtatgtcaacttcacatccct 333
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cttcttgttgatttctttgatcttttccttcagggtcttgtatgtcaacttcacatccct 547

             
Query: 334 gt 335
           ||
Sbjct: 548 gt 549



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                 
Query: 331 cctgttttcaggatngatttccagatccttcttaatgtcaacctctgctaactc 384
           |||||||||||||| |||||||||  ||||||||||||||||||||||||||||
Sbjct: 646 cctgttttcaggatcgatttccagtgccttcttaatgtcaacctctgctaactc 699
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>ref|XM_483423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2100

 Score =  266 bits (134), Expect = 7e-68
 Identities = 288/337 (85%), Gaps = 3/337 (0%)
 Strand = Plus / Minus

                                                                        
Query: 234  tggtcatcttagaaaacatattgctgtagaattaggcgtccttcttgttgatttctttga 293
            |||||||||| |  ||||||||||||||||||| ||| ||||||||||||   || ||||
Sbjct: 1773 tggtcatcttggcgaacatattgctgtagaatttggcatccttcttgttgtactccttga 1714

                                                                        
Query: 294  tcttttccttcagggtcttgtatgtcaacttcacatccctgttttcaggatngatttcca 353
             ||||||||| ||| |||||||||||||||||||||||||||| |||||||  ||||| |
Sbjct: 1713 ccttttccttgaggttcttgtatgtcaacttcacatccctgttatcaggatcaatttcaa 1654

                                                                        
Query: 354  gatccttcttaatgtcaacctctgctaactctaggtccgcaagctgagtgtaggcttgag 413
            |  |||||||||| || |||||||||||||||||||| ||||| ||  |||| ||||| |
Sbjct: 1653 gtgccttcttaatatccacctctgctaactctaggtcagcaagttgcatgtaagcttggg 1594

                                                                        
Query: 414  accttctgtacaaagccttgacatttcggctgtccagttccagaaatttggtgcaaagct 473
             ||| ||||| ||||||||||||||| ||||||| ||||||||||  |||||||||||||
Sbjct: 1593 ccctcctgtataaagccttgacattttggctgtcaagttccagaaccttggtgcaaagct 1534

                                                                        
Query: 474  tntcggattntcttatagtctttatagcttcagcttgcaggcagcattgtttaagttgca 533
            | || | ||  ||| || |||||  |||||||||||||||||||||||||| ||||||||
Sbjct: 1533 tctcagcttg-cttgtaatcttt-cagcttcagcttgcaggcagcattgttcaagttgca 1476

                                                 
Query: 534  ggtgaatnttcanttgcttggattgctttttctcatc 570
            ||| ||  |||| |||||||||||| || ||||||||
Sbjct: 1475 ggt-aaccttcagttgcttggattgtttcttctcatc 1440
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>dbj|AK103172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121G16, full
            insert sequence
          Length = 2100

 Score =  266 bits (134), Expect = 7e-68
 Identities = 288/337 (85%), Gaps = 3/337 (0%)
 Strand = Plus / Minus

                                                                        
Query: 234  tggtcatcttagaaaacatattgctgtagaattaggcgtccttcttgttgatttctttga 293
            |||||||||| |  ||||||||||||||||||| ||| ||||||||||||   || ||||
Sbjct: 1773 tggtcatcttggcgaacatattgctgtagaatttggcatccttcttgttgtactccttga 1714

                                                                        
Query: 294  tcttttccttcagggtcttgtatgtcaacttcacatccctgttttcaggatngatttcca 353
             ||||||||| ||| |||||||||||||||||||||||||||| |||||||  ||||| |
Sbjct: 1713 ccttttccttgaggttcttgtatgtcaacttcacatccctgttatcaggatcaatttcaa 1654

                                                                        
Query: 354  gatccttcttaatgtcaacctctgctaactctaggtccgcaagctgagtgtaggcttgag 413
            |  |||||||||| || |||||||||||||||||||| ||||| ||  |||| ||||| |
Sbjct: 1653 gtgccttcttaatatccacctctgctaactctaggtcagcaagttgcatgtaagcttggg 1594

                                                                        
Query: 414  accttctgtacaaagccttgacatttcggctgtccagttccagaaatttggtgcaaagct 473
             ||| ||||| ||||||||||||||| ||||||| ||||||||||  |||||||||||||
Sbjct: 1593 ccctcctgtataaagccttgacattttggctgtcaagttccagaaccttggtgcaaagct 1534

                                                                        
Query: 474  tntcggattntcttatagtctttatagcttcagcttgcaggcagcattgtttaagttgca 533
            | || | ||  ||| || |||||  |||||||||||||||||||||||||| ||||||||
Sbjct: 1533 tctcagcttg-cttgtaatcttt-cagcttcagcttgcaggcagcattgttcaagttgca 1476

                                                 
Query: 534  ggtgaatnttcanttgcttggattgctttttctcatc 570
            ||| ||  |||| |||||||||||| || ||||||||
Sbjct: 1475 ggt-aaccttcagttgcttggattgtttcttctcatc 1440
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>gb|AY104504.1| Zea mays PCO127462 mRNA sequence
          Length = 2108

 Score =  167 bits (84), Expect = 5e-38
 Identities = 191/227 (84%)
 Strand = Plus / Minus

                                                                        
Query: 248  aacatattgctgtagaattaggcgtccttcttgttgatttctttgatcttttccttcagg 307
            ||||| ||||||||||||| ||||||||||||||||   || |||||||| |||||||||
Sbjct: 1786 aacatgttgctgtagaatttggcgtccttcttgttgtactccttgatcttctccttcagg 1727

                                                                        
Query: 308  gtcttgtatgtcaacttcacatccctgttttcaggatngatttccagatccttcttaatg 367
             |||| |||  |||||| ||||||||||| ||||||| |||||||||  |||| || || 
Sbjct: 1726 atcttatattccaacttgacatccctgttgtcaggatcgatttccagtgcctttttgata 1667

                                                                        
Query: 368  tcaacctctgctaactctaggtccgcaagctgagtgtaggcttgagaccttctgtacaaa 427
            ||  ||||||||| ||||||||| ||||| ||| |||| |||||   ||| ||||| | |
Sbjct: 1666 tcggcctctgctagctctaggtcagcaagttgaatgtaagcttgcaccctcctgtagaga 1607

                                                           
Query: 428  gccttgacatttcggctgtccagttccagaaatttggtgcaaagctt 474
            |||||||||||| ||||||| ||||||||||  ||||||||||||||
Sbjct: 1606 gccttgacattttggctgtctagttccagaaccttggtgcaaagctt 1560



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 73/82 (89%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                        
Query: 501  cttcagcttgcaggcagcattgtttaagttgcaggtgaatnttcanttgcttggattgct 560
            |||||| ||||||||||||| ||||| ||||||| ||| | |||| ||||||||||||||
Sbjct: 1535 cttcagtttgcaggcagcatcgtttaggttgcagctga-tcttcagttgcttggattgct 1477

                                  
Query: 561  ttttctcatcctcactgaacga 582
            | |||||||| |||||||||||
Sbjct: 1476 tcttctcatcttcactgaacga 1455
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                            
Query: 234      tggtcatcttagaaaacatattgctgtagaattaggcgtccttcttgttgatttctttga 293
                |||||||||| |  ||||||||||||||||||| ||| ||||||||||||   || ||||
Sbjct: 26135344 tggtcatcttggcgaacatattgctgtagaatttggcatccttcttgttgtactccttga 26135285

                                                         
Query: 294      tcttttccttcagggtcttgtatgtcaacttcacatccctg 334
                 ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 26135284 ccttttccttgaggttcttgtatgtcaacttcacatccctg 26135244



 Score =  105 bits (53), Expect = 2e-19
 Identities = 109/128 (85%)
 Strand = Plus / Minus

                                                                            
Query: 331      cctgttttcaggatngatttccagatccttcttaatgtcaacctctgctaactctaggtc 390
                |||||| |||||||  ||||| ||  |||||||||| || ||||||||||||||||||||
Sbjct: 26135155 cctgttatcaggatcaatttcaagtgccttcttaatatccacctctgctaactctaggtc 26135096

                                                                            
Query: 391      cgcaagctgagtgtaggcttgagaccttctgtacaaagccttgacatttcggctgtccag 450
                 ||||| ||  |||| ||||| | ||| ||||| ||||||||||||||| ||||||| ||
Sbjct: 26135095 agcaagttgcatgtaagcttgggccctcctgtataaagccttgacattttggctgtcaag 26135036

                        
Query: 451      ttccagaa 458
                ||||||||
Sbjct: 26135035 ttccagaa 26135028



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 65/72 (90%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                            
Query: 499      agcttcagcttgcaggcagcattgtttaagttgcaggtgaatnttcanttgcttggattg 558
                |||||||||||||||||||||||||| ||||||||||| ||  |||| ||||||||||||
Sbjct: 26134908 agcttcagcttgcaggcagcattgttcaagttgcaggt-aaccttcagttgcttggattg 26134850

                            
Query: 559      ctttttctcatc 570
                 || ||||||||
Sbjct: 26134849 tttcttctcatc 26134838
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>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1191_A10
          Length = 140643

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                         
Query: 234   tggtcatcttagaaaacatattgctgtagaattaggcgtccttcttgttgatttctttga 293
             |||||||||| |  ||||||||||||||||||| ||| ||||||||||||   || ||||
Sbjct: 79275 tggtcatcttggcgaacatattgctgtagaatttggcatccttcttgttgtactccttga 79216

                                                      
Query: 294   tcttttccttcagggtcttgtatgtcaacttcacatccctg 334
              ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 79215 ccttttccttgaggttcttgtatgtcaacttcacatccctg 79175



 Score =  105 bits (53), Expect = 2e-19
 Identities = 109/128 (85%)
 Strand = Plus / Minus

                                                                         
Query: 331   cctgttttcaggatngatttccagatccttcttaatgtcaacctctgctaactctaggtc 390
             |||||| |||||||  ||||| ||  |||||||||| || ||||||||||||||||||||
Sbjct: 79086 cctgttatcaggatcaatttcaagtgccttcttaatatccacctctgctaactctaggtc 79027

                                                                         
Query: 391   cgcaagctgagtgtaggcttgagaccttctgtacaaagccttgacatttcggctgtccag 450
              ||||| ||  |||| ||||| | ||| ||||| ||||||||||||||| ||||||| ||
Sbjct: 79026 agcaagttgcatgtaagcttgggccctcctgtataaagccttgacattttggctgtcaag 78967

                     
Query: 451   ttccagaa 458
             ||||||||
Sbjct: 78966 ttccagaa 78959



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 65/72 (90%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                         
Query: 499   agcttcagcttgcaggcagcattgtttaagttgcaggtgaatnttcanttgcttggattg 558
             |||||||||||||||||||||||||| ||||||||||| ||  |||| ||||||||||||
Sbjct: 78839 agcttcagcttgcaggcagcattgttcaagttgcaggt-aaccttcagttgcttggattg 78781

                         
Query: 559   ctttttctcatc 570
              || ||||||||
Sbjct: 78780 tttcttctcatc 78769
to top
>ref|XM_472023.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1758

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 177/227 (77%)
 Strand = Plus / Minus

                                                                        
Query: 248  aacatattgctgtagaattaggcgtccttcttgttgatttctttgatcttttccttcagg 307
            ||||| |||| |||||| | ||||||  ||||||||   || |||||||| |||||||  
Sbjct: 1667 aacatgttgccgtagaacttggcgtctctcttgttgtactccttgatcttctccttcaat 1608

                                                                        
Query: 308  gtcttgtatgtcaacttcacatccctgttttcaggatngatttccagatccttcttaatg 367
            ||||| ||   || ||||||||||||||| |||||||  || |||||  | ||||| |  
Sbjct: 1607 gtcttatacaccatcttcacatccctgttgtcaggatcaatctccagtgctttcttgaca 1548

                                                                        
Query: 368  tcaacctctgctaactctaggtccgcaagctgagtgtaggcttgagaccttctgtacaaa 427
            || | ||||||||  || || || ||||||| | |||| || || | |||||||||||| 
Sbjct: 1547 tccaactctgctagttccagatcagcaagctcaatgtatgcctgcgtccttctgtacaag 1488

                                                           
Query: 428  gccttgacatttcggctgtccagttccagaaatttggtgcaaagctt 474
            ||||| ||||||  ||| |||||||||| ||  |||||||| |||||
Sbjct: 1487 gcctttacatttgtgctctccagttccaaaaccttggtgcagagctt 1441
to top
>gb|AF140495.2| Oryza sativa (japonica cultivar-group) FK506-binding protein mRNA,
            complete cds
          Length = 2233

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 177/227 (77%)
 Strand = Plus / Minus

                                                                        
Query: 248  aacatattgctgtagaattaggcgtccttcttgttgatttctttgatcttttccttcagg 307
            ||||| |||| |||||| | ||||||  ||||||||   || |||||||| |||||||  
Sbjct: 1750 aacatgttgccgtagaacttggcgtctctcttgttgtactccttgatcttctccttcaat 1691

                                                                        
Query: 308  gtcttgtatgtcaacttcacatccctgttttcaggatngatttccagatccttcttaatg 367
            ||||| ||   || ||||||||||||||| |||||||  || |||||  | ||||| |  
Sbjct: 1690 gtcttatacaccatcttcacatccctgttgtcaggatcaatctccagtgctttcttgaca 1631

                                                                        
Query: 368  tcaacctctgctaactctaggtccgcaagctgagtgtaggcttgagaccttctgtacaaa 427
            || | ||||||||  || || || ||||||| | |||| || || | |||||||||||| 
Sbjct: 1630 tccaactctgctagttccagatcagcaagctcaatgtatgcctgcgtccttctgtacaag 1571

                                                           
Query: 428  gccttgacatttcggctgtccagttccagaaatttggtgcaaagctt 474
            ||||| ||||||  ||| |||||||||| ||  |||||||| |||||
Sbjct: 1570 gcctttacatttgtgctctccagttccaaaaccttggtgcagagctt 1524
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>dbj|AK100844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123G09, full
            insert sequence
          Length = 2162

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 177/227 (77%)
 Strand = Plus / Minus

                                                                        
Query: 248  aacatattgctgtagaattaggcgtccttcttgttgatttctttgatcttttccttcagg 307
            ||||| |||| |||||| | ||||||  ||||||||   || |||||||| |||||||  
Sbjct: 1753 aacatgttgccgtagaacttggcgtctctcttgttgtactccttgatcttctccttcaat 1694

                                                                        
Query: 308  gtcttgtatgtcaacttcacatccctgttttcaggatngatttccagatccttcttaatg 367
            ||||| ||   || ||||||||||||||| |||||||  || |||||  | ||||| |  
Sbjct: 1693 gtcttatacaccatcttcacatccctgttgtcaggatcaatctccagtgctttcttgaca 1634

                                                                        
Query: 368  tcaacctctgctaactctaggtccgcaagctgagtgtaggcttgagaccttctgtacaaa 427
            || | ||||||||  || || || ||||||| | |||| || || | |||||||||||| 
Sbjct: 1633 tccaactctgctagttccagatcagcaagctcaatgtatgcctgcgtccttctgtacaag 1574

                                                           
Query: 428  gccttgacatttcggctgtccagttccagaaatttggtgcaaagctt 474
            ||||| ||||||  ||| |||||||||| ||  |||||||| |||||
Sbjct: 1573 gcctttacatttgtgctctccagttccaaaaccttggtgcagagctt 1527
to top
>emb|CR788232.9| Zebrafish DNA sequence from clone DKEY-283M16 in linkage group 2,
             complete sequence
          Length = 70979

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 178   ccttgctttgggtattgctccagt 201
             ||||||||||||||||||||||||
Sbjct: 44745 ccttgctttgggtattgctccagt 44722
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>gb|BT012788.1| Lycopersicon esculentum clone 113780F, mRNA sequence
          Length = 2264

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 322  cttcacatccctgttttcaggatngatttccagatccttcttaatgtcaa 371
            ||||||||||||||| |||||||  || || ||| | |||||||||||||
Sbjct: 1772 cttcacatccctgttgtcaggatcaatctcaagagctttcttaatgtcaa 1723



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 502  ttcagcttgcaggcagcattgtttaagttgcaggtga 538
            |||| |||||| || ||||| ||||||||||||||||
Sbjct: 1594 ttcaacttgcaagctgcattatttaagttgcaggtga 1558
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>emb|Y07636.1|TAFKBP77 T.aestivum mRNA for peptidylprolyl isomerase
          Length = 1999

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 550  cttggattgctttttctcatcctcactgaa 579
            |||||||||||| ||||||||||| |||||
Sbjct: 1413 cttggattgcttcttctcatcctcgctgaa 1384
to top
>emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chromosome 11 Contains a
             novel gene, the Pafah1b1 gene for platelet-activating
             factor acetylhydrolase isoform 1b beta1 subunit, the 5'
             end of a novel gene and two CpG islands, complete sequence
          Length = 137908

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 555   attgctttttctcatcctcact 576
             ||||||||||||||||||||||
Sbjct: 53357 attgctttttctcatcctcact 53336
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>gb|U95119.1|MMU95119 Mus musculus Pafaha/Lis1 exon 3, complete sequence
          Length = 13407

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 555  attgctttttctcatcctcact 576
            ||||||||||||||||||||||
Sbjct: 9904 attgctttttctcatcctcact 9925
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>gb|AC104964.12| Homo sapiens chromosome 8, clone RP11-981G7, complete sequence
          Length = 212226

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 162   actccgggactccgatccttgcttt 186
             |||| ||||||||||||||||||||
Sbjct: 83021 actcagggactccgatccttgcttt 83045
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>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07,
             complete sequence
          Length = 138383

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 415   ccttctgtacaaagccttgacatttcggctgtccagttcca 455
             |||||||||||| ||||| ||||||  ||| ||||||||||
Sbjct: 75262 ccttctgtacaaggcctttacatttgtgctctccagttcca 75302
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>gb|AC099564.2| Homo sapiens chromosome 1 clone RP11-359A17, complete sequence
          Length = 189509

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 284   atttctttgatcttttccttc 304
             |||||||||||||||||||||
Sbjct: 61555 atttctttgatcttttccttc 61575
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 415      ccttctgtacaaagccttgacatttcggctgtccagttcca 455
                |||||||||||| ||||| ||||||  ||| ||||||||||
Sbjct: 16824831 ccttctgtacaaggcctttacatttgtgctctccagttcca 16824871
to top
>dbj|AK173395.1| Ciona intestinalis cDNA, clone:cilv028p09, full insert sequence
          Length = 2192

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 285 tttctttgatcttttccttca 305
           |||||||||||||||||||||
Sbjct: 916 tttctttgatcttttccttca 896
to top
>gb|U83594.1|OPU83594 Ovine papillomavirus 1 complete genome
          Length = 7761

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 499  agcttcagcttgcaggcagca 519
            |||||||||||||||||||||
Sbjct: 1303 agcttcagcttgcaggcagca 1283
to top
>gb|AC157556.12| Mus musculus chromosome 1, clone RP24-267A19, complete sequence
          Length = 198267

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   tcttgttgatttctttgatc 295
             ||||||||||||||||||||
Sbjct: 56503 tcttgttgatttctttgatc 56522
to top
>ref|XM_465763.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2341

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                
Query: 489  tagtctttatagcttcagcttgcaggcagcattgtt 524
            ||||||||| ||||||||||| || |||||||||||
Sbjct: 1629 tagtcttta-agcttcagcttacatgcagcattgtt 1595
to top
>ref|NM_080396.1| Rattus norvegicus transient receptor potential cation channel,
            subfamily C, member 4 (Trpc4), transcript variant 2, mRNA
          Length = 3127

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagctttctggctttcttct 223
            ||||||||||||||||||||
Sbjct: 2069 aagctttctggctttcttct 2050
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>ref|NM_053434.1| Rattus norvegicus transient receptor potential cation channel,
            subfamily C, member 4 (Trpc4), transcript variant 1, mRNA
          Length = 3270

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagctttctggctttcttct 223
            ||||||||||||||||||||
Sbjct: 2115 aagctttctggctttcttct 2096
to top
>gb|AC146278.3| Pan troglodytes BAC clone CH251-26J9 from X, complete sequence
          Length = 199900

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   aacttcacatccctgttttc 339
             ||||||||||||||||||||
Sbjct: 26264 aacttcacatccctgttttc 26245
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>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence
          Length = 137052

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 295   cttttccttcagggtcttgtatgtcaacttcacatccctg 334
             |||||||||||  ||||||||   ||||||||||||||||
Sbjct: 43132 cttttccttcaaagtcttgtactccaacttcacatccctg 43093
to top
>emb|AL731897.12| Human DNA sequence from clone RP11-284G10 on chromosome 9 Contains a
              novel gene, complete sequence
          Length = 125196

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 285    tttctttgatcttttccttcagggtctt 312
              |||||||||||| ||| |||||||||||
Sbjct: 115745 tttctttgatctcttctttcagggtctt 115772
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>emb|AL590664.8| Human DNA sequence from clone RP11-66C24 on chromosome 9, complete
            sequence
          Length = 68217

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  aacttcacatccctgttttc 339
            ||||||||||||||||||||
Sbjct: 8991 aacttcacatccctgttttc 9010
to top
>emb|AL357312.8| Human DNA sequence from clone RP11-390F10 on chromosome Xq21.2-22.1
            Contains a eukaryotic translation elongation factor 1
            alpha 1 (EEF1A1) pseudogene and a high-mobility group box
            1 (HMGB1) pseudogene, complete sequence
          Length = 187469

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  aacttcacatccctgttttc 339
            ||||||||||||||||||||
Sbjct: 4752 aacttcacatccctgttttc 4733
to top
>emb|AL356277.18| Human DNA sequence from clone RP11-554D15 on chromosome 6 Contains a
             pseudogene similar to part of ubiquinol-cytochrome c
             reductase core protein II (UQCRC2), a novel gene and the
             3' ends of two novel genes, complete sequence
          Length = 181891

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   aacttcacatccctgttttc 339
             ||||||||||||||||||||
Sbjct: 46651 aacttcacatccctgttttc 46632
to top
>emb|AL138959.20| Human DNA sequence from clone RP11-214O11 on chromosome 13 Contains a
             nucleosome assembly protein 1-like 1 (NAP1L1) pseudogene
             and a ribosomal protein L27a (RPL27A) pseudogene, complete
             sequence
          Length = 168790

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   ccagttcaagctttctggct 216
             ||||||||||||||||||||
Sbjct: 96828 ccagttcaagctttctggct 96809
to top
>emb|AL138798.10| Human DNA sequence from clone RP1-82G18 on chromosome 1p36.12-36.31,
            complete sequence
          Length = 8465

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 280  gttgatttctttgatcttttccttcagg 307
            ||||| || |||||||||||||||||||
Sbjct: 6300 gttgaattttttgatcttttccttcagg 6327
to top
>gb|AC011601.21| Homo sapiens 12 BAC RP11-498M15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 4301

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  aacttcacatccctgttttc 339
            ||||||||||||||||||||
Sbjct: 2492 aacttcacatccctgttttc 2511
to top
>gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome 14, complete sequence
          Length = 219067

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   agctttctggctttcttctg 224
             ||||||||||||||||||||
Sbjct: 45615 agctttctggctttcttctg 45634
to top
>emb|BX927303.11| Zebrafish DNA sequence from clone CH211-67L13 in linkage group 6,
              complete sequence
          Length = 163380

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     aaacatgaacttttaaacaa 44
              ||||||||||||||||||||
Sbjct: 101874 aaacatgaacttttaaacaa 101893
to top
>emb|AL669931.9| Mouse DNA sequence from clone RP23-31D18 on chromosome 11 Contains the
             Stc2 gene for stanniocalcin 2 and three CpG islands,
             complete sequence
          Length = 252980

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   gacaagctggcccttccttc 156
             ||||||||||||||||||||
Sbjct: 84631 gacaagctggcccttccttc 84612
to top
>gb|AC005293.1| Homo sapiens 12p13.3 PAC RPCI5-977L1 (Roswell Park Cancer Institute
             Human PAC library) complete sequence
          Length = 143334

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   aacttcacatccctgttttc 339
             ||||||||||||||||||||
Sbjct: 31579 aacttcacatccctgttttc 31598
to top
>gb|AC113169.2| Homo sapiens chromosome 3 clone RP11-322K13, complete sequence
          Length = 174293

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ccagttcaagctttctggct 216
              ||||||||||||||||||||
Sbjct: 105882 ccagttcaagctttctggct 105863
to top
>gb|AC112213.2| Homo sapiens chromosome 3 clone RP11-223D18, complete sequence
          Length = 144201

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  ccagttcaagctttctggct 216
            ||||||||||||||||||||
Sbjct: 2538 ccagttcaagctttctggct 2519
to top
>gb|AC073588.3| Homo sapiens chromosome 10 clone RP11-96N16, complete sequence
          Length = 166120

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    aacttcacatccctgttttc 339
              ||||||||||||||||||||
Sbjct: 122059 aacttcacatccctgttttc 122078
to top
>gb|AC118456.2| Homo sapiens chromosome 5 clone CTD-2288B6, complete sequence
          Length = 121822

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    aacttcacatccctgttttc 339
              ||||||||||||||||||||
Sbjct: 121624 aacttcacatccctgttttc 121605
to top
>gb|AC079264.23| Homo sapiens Xp BAC RP11-315B16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194851

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    aacttcacatccctgttttc 339
              ||||||||||||||||||||
Sbjct: 187814 aacttcacatccctgttttc 187795
to top
>gb|AC008697.7| Homo sapiens chromosome 5 clone CTB-70D3, complete sequence
          Length = 120994

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   aacttcacatccctgttttc 339
             ||||||||||||||||||||
Sbjct: 20489 aacttcacatccctgttttc 20470
to top
>gb|AE010179.1| Pyrococcus furiosus DSM 3638, section 54 of 173 of the complete genome
          Length = 13617

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   taagcagacaagctggcccttcct 154
             ||||||||||||||||| ||||||
Sbjct: 11057 taagcagacaagctggctcttcct 11080
to top
>gb|AC097066.2| Homo sapiens chromosome 1 clone RP11-575B7, complete sequence
          Length = 168686

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   tctaaacatgaacttttaaa 41
            ||||||||||||||||||||
Sbjct: 3493 tctaaacatgaacttttaaa 3474
to top
>gb|AC010240.7| Homo sapiens chromosome 5 clone CTC-350I8, complete sequence
          Length = 112646

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   aacttcacatccctgttttc 339
             ||||||||||||||||||||
Sbjct: 59792 aacttcacatccctgttttc 59773
to top
>gb|AC092333.2| Homo sapiens chromosome 5 clone RP11-195A20, complete sequence
          Length = 157402

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    aacttcacatccctgttttc 339
              ||||||||||||||||||||
Sbjct: 105197 aacttcacatccctgttttc 105178
to top
>gb|AF421368.1|AF421368 Rattus norvegicus transient receptor potential channel 4 kappa splice
            variant (Trpc4) mRNA, complete cds; alternatively spliced
          Length = 2864

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagctttctggctttcttct 223
            ||||||||||||||||||||
Sbjct: 2058 aagctttctggctttcttct 2039
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>gb|AF421367.1|AF421367 Rattus norvegicus transient receptor potential channel 4 iota splice
            variant (Trpc4) mRNA, complete cds; alternatively spliced
          Length = 2822

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagctttctggctttcttct 223
            ||||||||||||||||||||
Sbjct: 2016 aagctttctggctttcttct 1997
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>gb|AF421366.1|AF421366 Rattus norvegicus transient receptor potential channel 4 theta splice
            variant (Trpc4) mRNA, complete cds; alternatively spliced
          Length = 2807

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagctttctggctttcttct 223
            ||||||||||||||||||||
Sbjct: 2001 aagctttctggctttcttct 1982
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>gb|AF421365.1|AF421365 Rattus norvegicus transient receptor potential channel 4 beta-2
            splice variant (Trpc4) mRNA, complete cds; alternatively
            spliced
          Length = 2872

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagctttctggctttcttct 223
            ||||||||||||||||||||
Sbjct: 2069 aagctttctggctttcttct 2050
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>gb|AF421364.1|AF421364 Rattus norvegicus transient receptor potential channel 4 beta splice
            variant (Trpc4) mRNA, complete cds; alternatively spliced
          Length = 2875

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagctttctggctttcttct 223
            ||||||||||||||||||||
Sbjct: 2069 aagctttctggctttcttct 2050
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>gb|AF421363.1|AF421363 Rattus norvegicus transient receptor potential channel 4 alpha splice
            variant (Trpc4) mRNA, complete cds; alternatively spliced
          Length = 3127

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagctttctggctttcttct 223
            ||||||||||||||||||||
Sbjct: 2069 aagctttctggctttcttct 2050
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>gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, complete sequence
          Length = 159956

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    aacttcacatccctgttttc 339
              ||||||||||||||||||||
Sbjct: 101544 aacttcacatccctgttttc 101563
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>gb|AC092796.2| Homo sapiens chromosome 3 clone RP11-11F9, complete sequence
          Length = 151219

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  aacttcacatccctgttttc 339
            ||||||||||||||||||||
Sbjct: 9735 aacttcacatccctgttttc 9716
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>gb|AC008378.6| Homo sapiens chromosome 5 clone CTC-209H22, complete sequence
          Length = 161267

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    aacttcacatccctgttttc 339
              ||||||||||||||||||||
Sbjct: 148788 aacttcacatccctgttttc 148769
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>gb|AC010387.5| Homo sapiens chromosome 5 clone CTD-2074D8, complete sequence
          Length = 173414

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   aacttcacatccctgttttc 339
             ||||||||||||||||||||
Sbjct: 25811 aacttcacatccctgttttc 25792
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>gb|AC027684.3| Homo sapiens chromosome 16 clone RP11-148F10, complete sequence
          Length = 187520

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 121   caaccagagctaagcagacaagct 144
             |||||||||||||| |||||||||
Sbjct: 39325 caaccagagctaagtagacaagct 39302
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>gb|AC092795.2| Homo sapiens chromosome 3 clone RP11-9J18, complete sequence
          Length = 142517

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    aacttcacatccctgttttc 339
              ||||||||||||||||||||
Sbjct: 120265 aacttcacatccctgttttc 120246
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>emb|AJ549502.2|HSA549502 Homo sapiens peptidylarginine deiminase gene locus (PADI12346 genes)
          Length = 355060

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 280    gttgatttctttgatcttttccttcagg 307
              ||||| || |||||||||||||||||||
Sbjct: 270699 gttgaattttttgatcttttccttcagg 270726
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 32      aacttttaaacaagaaaaat 51
               ||||||||||||||||||||
Sbjct: 1920110 aacttttaaacaagaaaaat 1920129
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>gb|AC159023.4| Pan troglodytes BAC clone CH251-506L16 from chromosome unknown, complete
              sequence
          Length = 180977

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    aacttcacatccctgttttc 339
              ||||||||||||||||||||
Sbjct: 140571 aacttcacatccctgttttc 140590
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                    
Query: 489      tagtctttatagcttcagcttgcaggcagcattgtt 524
                ||||||||| ||||||||||| || |||||||||||
Sbjct: 17257553 tagtcttta-agcttcagcttacatgcagcattgtt 17257587
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>gb|AC008126.9|AC008126 Homo sapiens 12 BAC RPCI11-90E9 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 173545

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   cttgcaggcagcattgttta 526
             ||||||||||||||||||||
Sbjct: 97489 cttgcaggcagcattgttta 97470
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>gb|AC093515.4| Homo sapiens chromosome 16 clone CTD-2535I10, complete sequence
          Length = 184182

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 121    caaccagagctaagcagacaagct 144
              |||||||||||||| |||||||||
Sbjct: 102792 caaccagagctaagtagacaagct 102769
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>gb|AC012499.8| Homo sapiens BAC clone RP11-428I14 from 2, complete sequence
          Length = 183436

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ccagttcaagctttctggct 216
              ||||||||||||||||||||
Sbjct: 105009 ccagttcaagctttctggct 104990
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>gb|AF288408.1|AF288408 Rattus norvegicus transient receptor potential Trp4beta mRNA,
            complete cds
          Length = 2760

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagctttctggctttcttct 223
            ||||||||||||||||||||
Sbjct: 2085 aagctttctggctttcttct 2066
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>gb|AF288407.1|AF288407 Rattus norvegicus transient receptor potential Trp4alpha mRNA,
            complete cds
          Length = 3012

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagctttctggctttcttct 223
            ||||||||||||||||||||
Sbjct: 2085 aagctttctggctttcttct 2066
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>gb|AC104788.5| Homo sapiens BAC clone RP11-128I4 from 2, complete sequence
          Length = 123023

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ccagttcaagctttctggct 216
              ||||||||||||||||||||
Sbjct: 115709 ccagttcaagctttctggct 115690
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>gb|AC073612.17| Homo sapiens 12 BAC RP11-293I14 (Roswell Park Cancer Institute
           Human BAC Library) complete sequence
          Length = 54262

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 320 aacttcacatccctgttttc 339
           ||||||||||||||||||||
Sbjct: 293 aacttcacatccctgttttc 312
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>gb|AC159743.4| Pan troglodytes BAC clone CH251-267D14 from chromosome unknown, complete
              sequence
          Length = 178837

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    aacttcacatccctgttttc 339
              ||||||||||||||||||||
Sbjct: 132971 aacttcacatccctgttttc 132952
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>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete
              sequence
          Length = 640681

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 549    gcttggattgctttttctca 568
              ||||||||||||||||||||
Sbjct: 177355 gcttggattgctttttctca 177374
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>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0579G08
          Length = 164452

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                 
Query: 489   tagtctttatagcttcagcttgcaggcagcattgtt 524
             ||||||||| ||||||||||| || |||||||||||
Sbjct: 30236 tagtcttta-agcttcagcttacatgcagcattgtt 30270
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>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0048K16
          Length = 159891

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                  
Query: 489    tagtctttatagcttcagcttgcaggcagcattgtt 524
              ||||||||| ||||||||||| || |||||||||||
Sbjct: 128320 tagtcttta-agcttcagcttacatgcagcattgtt 128354
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>dbj|AK073233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H01, full
            insert sequence
          Length = 2341

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                
Query: 489  tagtctttatagcttcagcttgcaggcagcattgtt 524
            ||||||||| ||||||||||| || |||||||||||
Sbjct: 1629 tagtcttta-agcttcagcttacatgcagcattgtt 1595
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>gb|AC144798.4| Mus musculus BAC clone RP24-364A24 from 14, complete sequence
          Length = 159766

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    agctttctggctttcttctg 224
              ||||||||||||||||||||
Sbjct: 107986 agctttctggctttcttctg 108005
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>emb|CR352309.9| Zebrafish DNA sequence from clone DKEYP-72H1 in linkage group 20,
              complete sequence
          Length = 142300

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     aaacatgaacttttaaacaa 44
              ||||||||||||||||||||
Sbjct: 128916 aaacatgaacttttaaacaa 128897
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>dbj|AP000999.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-667I23, complete
              sequence
          Length = 189892

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    aacttcacatccctgttttc 339
              ||||||||||||||||||||
Sbjct: 128667 aacttcacatccctgttttc 128648
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>dbj|AP002853.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-46K15, complete
             sequence
          Length = 177463

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   aacttcacatccctgttttc 339
             ||||||||||||||||||||
Sbjct: 46239 aacttcacatccctgttttc 46220
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>dbj|AP006293.2| Homo sapiens genomic DNA, chromosome 9 clone:RP11-818I20, complete
             sequence
          Length = 155000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 285   tttctttgatcttttccttcagggtctt 312
             |||||||||||| ||| |||||||||||
Sbjct: 34293 tttctttgatctcttctttcagggtctt 34320
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>dbj|AP002795.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-715G18, complete
              sequence
          Length = 165240

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ccagttcaagctttctggct 216
              ||||||||||||||||||||
Sbjct: 120942 ccagttcaagctttctggct 120923
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>emb|AL935193.9| Zebrafish DNA sequence from clone CH211-209H11, complete sequence
          Length = 208059

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     ttttaaacaagaaaaattat 54
              ||||||||||||||||||||
Sbjct: 201208 ttttaaacaagaaaaattat 201227
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>dbj|AB008889.2| Rattus norvegicus TRP mRNA for truncated form of presumptive
            transient receptor potential, complete cds
          Length = 3270

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagctttctggctttcttct 223
            ||||||||||||||||||||
Sbjct: 2115 aagctttctggctttcttct 2096
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>dbj|AB020874.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium
             cancer , segment 6/10
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 285   tttctttgatcttttccttcagggtctt 312
             |||||||||||| ||| |||||||||||
Sbjct: 39314 tttctttgatctcttctttcagggtctt 39341


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,086,654
Number of Sequences: 3902068
Number of extensions: 6086654
Number of successful extensions: 124813
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 124496
Number of HSP's gapped (non-prelim): 312
length of query: 582
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 559
effective length of database: 17,143,297,704
effective search space: 9583103416536
effective search space used: 9583103416536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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