| Clone Name | rbags24l09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CJ022_MOUSE (Q6PDY2) Protein C10orf22 homolog | 48 | 2e-05 | 2 | CJ022_HUMAN (Q96SZ5) Protein C10orf22 | 48 | 3e-05 | 3 | ODO2_HUMAN (P36957) Dihydrolipoyllysine-residue succinyltransfer... | 34 | 0.35 | 4 | SOX8_CHICK (P57074) Transcription factor SOX-8 | 32 | 1.3 | 5 | BORL4_ARATH (Q9SUU1) Putative boron transporter-like protein 4 | 30 | 5.0 | 6 | ITA1_DROME (Q24247) Integrin alpha-PS1 precursor (Position-speci... | 30 | 8.6 |
|---|
>CJ022_MOUSE (Q6PDY2) Protein C10orf22 homolog| Length = 256 Score = 48.1 bits (113), Expect = 2e-05 Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = -3 Query: 662 NIHTFRAIT-PCALFDVLSPPYSAENGRDCSYFRKSPVKEPSVVLPSEIDSSEVVWLEE 489 N+H A+ P A D+L+PPY E+GRDC Y+R P S D VWL E Sbjct: 177 NLHQIDAVDGPAAFLDILAPPYDPEDGRDCHYYRVVEPIRPKEASGSACDLPREVWLLE 235
>CJ022_HUMAN (Q96SZ5) Protein C10orf22| Length = 270 Score = 47.8 bits (112), Expect = 3e-05 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = -3 Query: 662 NIHTFRAIT-PCALFDVLSPPYSAENGRDCSYFRKSPVKEPSVVLPSEIDSSEVVWLEE 489 N+H A+ P A D+L+PPY ++GRDC Y+R P S D VWL E Sbjct: 191 NLHQIDAVEGPAAFLDILAPPYDPDDGRDCHYYRVLEPVRPKEASSSACDLPREVWLLE 249
>ODO2_HUMAN (P36957) Dihydrolipoyllysine-residue succinyltransferase component| of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor (EC 2.3.1.61) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) (E2) (E2 Length = 453 Score = 34.3 bits (77), Expect = 0.35 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +2 Query: 461 SPLEADGPPIP-PTRLPQSYLFHSAKQQMAPSLVTSGSMNSLSHSQRNKVEKGRQRV 628 +P+ PP+P P++ P + K +AP L +G+ L R K+ + RQR+ Sbjct: 178 APIPTQMPPVPSPSQPPSGKPVSAVKPTVAPPLADAGAGKGLRSEHREKMNRMRQRI 234
>SOX8_CHICK (P57074) Transcription factor SOX-8| Length = 470 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = +2 Query: 479 GPPIPPTRLPQSYLFHSAKQQMAPSLVTSGSMNSLSHSQRNKVEKGRQRV 628 GPP PPT P++ L H +KQ+ L H R VE GRQ + Sbjct: 232 GPPTPPTT-PKTDLHHGSKQE-------------LKHEGRRLVESGRQNI 267
>BORL4_ARATH (Q9SUU1) Putative boron transporter-like protein 4| Length = 710 Score = 30.4 bits (67), Expect = 5.0 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%) Frame = -1 Query: 364 LVSVVCGLV---EQVSSRQPASSLW--FTLYTHHLLWVNE--ETIETIFIVPARYWSNAA 206 L SV+ GL+ V P S LW FT L N+ E ++ +FI P R + Sbjct: 503 LQSVLVGLLILAVPVLRMIPTSVLWGYFTYMAVDSLPGNQFWERLQLLFITPGRRFKVLE 562 Query: 205 GL*CTHVALLSDEGLGVYTSFEIGEFLPC 119 GL + V ++ + + ++T F++ FL C Sbjct: 563 GLHASFVEIVPYKSIVMFTLFQLLYFLIC 591
>ITA1_DROME (Q24247) Integrin alpha-PS1 precursor (Position-specific antigen 1| alpha chain) (Protein multiple edematous wings) Length = 1146 Score = 29.6 bits (65), Expect = 8.6 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 3/97 (3%) Frame = +2 Query: 350 YN*YEAP-SGSSIHWQKWYQNL-TISLSQGLCTNL*QQQSPLE-ADGPPIPPTRLPQSYL 520 Y+ Y P SG + + + + + T+ +SQG C + +PL A G +R +YL Sbjct: 856 YSLYSDPQSGRPVQYLLYLEQVPTVEVSQGECHVAKEYVNPLNLASG-----SRENPAYL 910 Query: 521 FHSAKQQMAPSLVTSGSMNSLSHSQRNKVEKGRQRVH 631 A+ +M PS SL HSQR+ + H Sbjct: 911 SAPAQMRMFPSQSRHSFNKSLIHSQRSYYSSSHRDDH 947 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,172,145 Number of Sequences: 219361 Number of extensions: 2276038 Number of successful extensions: 6061 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5781 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6059 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)