| Clone Name | rbags24l05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 Score = 850 bits (429), Expect = 0.0 Identities = 434/436 (99%) Strand = Plus / Minus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2372 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 2313 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2312 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 2253 Query: 441 cctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctc 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2252 cctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctc 2193 Query: 501 cttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctg 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2192 cttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctg 2133 Query: 561 cttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcc 620 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2132 cttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccatcc 2073 Query: 621 atacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacaga 680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2072 atacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacaga 2013 Query: 681 gtcaatgccctccgtgtccagggccttcttncaccagtcggtcagctccttgaacgactc 740 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2012 gtcaatgccctccgtgtccagggccttcttccaccagtcggtcagctccttgaacgactc 1953 Query: 741 cttgaggtccttgagc 756 |||||||||||||||| Sbjct: 1952 cttgaggtccttgagc 1937 Score = 460 bits (232), Expect = e-126 Identities = 241/243 (99%), Gaps = 1/243 (0%) Strand = Plus / Minus Query: 11 tgcacgctaattcna-ctagctagggtatcgtcattaaacaagaaactaggtacagtagt 69 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2682 tgcacgctaattccaactagctagggtatcgtcattaaacaagaaactaggtacagtagt 2623 Query: 70 acattacacggacaaaaccccccgtatcacgatcgatgattaatcgtcttccgcgcggta 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2622 acattacacggacaaaaccccccgtatcacgatcgatgattaatcgtcttccgcgcggta 2563 Query: 130 aaaatggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2562 aaaatggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatg 2503 Query: 190 aaagctaaatgggcgatatgagcaactacagctcgtccttgtcgtactgctcgtgttccg 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2502 aaagctaaatgggcgatatgagcaactacagctcgtccttgtcgtactgctcgtgttccg 2443 Query: 250 gct 252 ||| Sbjct: 2442 gct 2440
>gb|AY103537.1| Zea mays PCO098403 mRNA sequence Length = 2806 Score = 565 bits (285), Expect = e-158 Identities = 398/436 (91%) Strand = Plus / Minus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 2403 cacggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgc 2344 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 || ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2343 gaactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccag 2284 Query: 441 cctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctc 500 |||||||||||||||||| ||||||| || |||||||||||||||||||||||||||| Sbjct: 2283 cctcgccgtctgcttcagctcctcgctctcattgtcctgggcgaccttgtcgcggagctc 2224 Query: 501 cttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctg 560 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2223 cttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctg 2164 Query: 561 cttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcc 620 |||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| || Sbjct: 2163 cttgctcgagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccaccc 2104 Query: 621 atacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacaga 680 |||||||||||||| || || |||||||||| |||||||||||||||||||||||| || Sbjct: 2103 gtacttggaggtgacgacgacgcagggggtgtcgtgcagccggttgctgatcttcaccga 2044 Query: 681 gtcaatgccctccgtgtccagggccttcttncaccagtcggtcagctccttgaacgactc 740 ||| | | ||| | |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 2043 gtccacgttctcgctctccagggccttcttccaccagtcagtcagctccttgaacgactc 1984 Query: 741 cttgaggtccttgagc 756 |||||| ||||||||| Sbjct: 1983 cttgagctccttgagc 1968
>gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence Length = 1544 Score = 549 bits (277), Expect = e-153 Identities = 387/424 (91%) Strand = Plus / Minus Query: 328 gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 387 |||||||||||||||||||||| ||||||||||||| ||||||||| ||||| || ||| Sbjct: 1226 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1167 Query: 388 ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 447 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1166 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1107 Query: 448 gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 507 || |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1106 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1047 Query: 508 atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 567 |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1046 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 987 Query: 568 gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccatacttg 627 | ||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||| Sbjct: 986 gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtacttg 927 Query: 628 gaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagagtcaatg 687 ||||||||||| || |||||||||| |||||||||||||||||||||||| ||||| | | Sbjct: 926 gaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcaccgagtccacg 867 Query: 688 ccctccgtgtccagggccttcttncaccagtcggtcagctccttgaacgactccttgagg 747 ||| | |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 866 ttctcgctctccagggccttcttccaccagtcagtcagctccttgaacgactccttgagc 807 Query: 748 tcct 751 |||| Sbjct: 806 tcct 803
>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence Length = 2511 Score = 549 bits (277), Expect = e-153 Identities = 396/436 (90%) Strand = Plus / Minus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 2173 cacggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgc 2114 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 || ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 2113 gaactccttggggtcggggagggtgaacccgctctccatcagggccgtctggtacaccag 2054 Query: 441 cctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctc 500 |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 2053 cctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctc 1994 Query: 501 cttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctg 560 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1993 cttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctg 1934 Query: 561 cttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcc 620 |||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||| || Sbjct: 1933 cttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccaccc 1874 Query: 621 atacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacaga 680 |||||||||||||| || || ||||||||| |||||||||| |||||| |||||| || Sbjct: 1873 gtacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcaccga 1814 Query: 681 gtcaatgccctccgtgtccagggccttcttncaccagtcggtcagctccttgaacgactc 740 ||| | || ||| | |||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 1813 gtccacgctctcgctctccagggccttcttccaccactccgtcagctccttgaacgactc 1754 Query: 741 cttgaggtccttgagc 756 |||||||||||||||| Sbjct: 1753 cttgaggtccttgagc 1738
>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full insert sequence Length = 2708 Score = 517 bits (261), Expect = e-143 Identities = 392/436 (89%) Strand = Plus / Minus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 2417 cacggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggc 2358 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 2357 gaagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccag 2298 Query: 441 cctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctc 500 | ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| || Sbjct: 2297 cttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttc 2238 Query: 501 cttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctg 560 ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| Sbjct: 2237 cttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctg 2178 Query: 561 cttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcc 620 |||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 2177 cttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccaccc 2118 Query: 621 atacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacaga 680 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| || Sbjct: 2117 gtacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccga 2058 Query: 681 gtcaatgccctccgtgtccagggccttcttncaccagtcggtcagctccttgaacgactc 740 ||| | || ||| ||||| || |||||||| ||||||||||||||||||||||| ||||| Sbjct: 2057 gtccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactc 1998 Query: 741 cttgaggtccttgagc 756 |||||||||||||||| Sbjct: 1997 cttgaggtccttgagc 1982 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 129 aaaaatggacgtccctcaaaaccatcacattt 160 ||||||||||||||||| |||||||||||||| Sbjct: 2608 aaaaatggacgtccctcgaaaccatcacattt 2577
>dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G02, full insert sequence Length = 2026 Score = 517 bits (261), Expect = e-143 Identities = 392/436 (89%) Strand = Plus / Minus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 1739 cacggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggc 1680 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1679 gaagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccag 1620 Query: 441 cctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctc 500 | ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| || Sbjct: 1619 cttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttc 1560 Query: 501 cttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctg 560 ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| Sbjct: 1559 cttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctg 1500 Query: 561 cttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcc 620 |||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 1499 cttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccaccc 1440 Query: 621 atacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacaga 680 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| || Sbjct: 1439 gtacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccga 1380 Query: 681 gtcaatgccctccgtgtccagggccttcttncaccagtcggtcagctccttgaacgactc 740 ||| | || ||| ||||| || |||||||| ||||||||||||||||||||||| ||||| Sbjct: 1379 gtccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactc 1320 Query: 741 cttgaggtccttgagc 756 |||||||||||||||| Sbjct: 1319 cttgaggtccttgagc 1304 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 129 aaaaatggacgtccctcaaaaccatcacattt 160 ||||||||||||||||| |||||||||||||| Sbjct: 1930 aaaaatggacgtccctcgaaaccatcacattt 1899
>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full insert sequence Length = 1944 Score = 509 bits (257), Expect = e-141 Identities = 391/436 (89%) Strand = Plus / Minus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 1657 cacggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggc 1598 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1597 gaagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccag 1538 Query: 441 cctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctc 500 | ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| || Sbjct: 1537 cttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttc 1478 Query: 501 cttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctg 560 ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| Sbjct: 1477 cttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctg 1418 Query: 561 cttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcc 620 |||||| || ||||| |||||||||| |||||||||||||||| |||||| ||||| || Sbjct: 1417 cttgctggcatccgagagggtctgtgactgcatgatcttctccgtgttggcgctccaccc 1358 Query: 621 atacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacaga 680 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| || Sbjct: 1357 gtacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccga 1298 Query: 681 gtcaatgccctccgtgtccagggccttcttncaccagtcggtcagctccttgaacgactc 740 ||| | || ||| ||||| || |||||||| ||||||||||||||||||||||| ||||| Sbjct: 1297 gtccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactc 1238 Query: 741 cttgaggtccttgagc 756 |||||||||||||||| Sbjct: 1237 cttgaggtccttgagc 1222 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 129 aaaaatggacgtccctcaaaaccatcacattt 160 ||||||||||||||||| |||||||||||||| Sbjct: 1848 aaaaatggacgtccctcgaaaccatcacattt 1817
>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds Length = 2731 Score = 509 bits (257), Expect = e-141 Identities = 391/436 (89%) Strand = Plus / Minus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| | || Sbjct: 2411 cacggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctgaaggc 2352 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 2351 gaagtccttgggatcagggaggttgaagccgctctccatgagggccgtctggtacaccag 2292 Query: 441 cctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctc 500 | ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| || Sbjct: 2291 cttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttc 2232 Query: 501 cttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctg 560 ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| Sbjct: 2231 cttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctg 2172 Query: 561 cttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcc 620 |||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 2171 cttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccaccc 2112 Query: 621 atacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacaga 680 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| || Sbjct: 2111 gtacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccga 2052 Query: 681 gtcaatgccctccgtgtccagggccttcttncaccagtcggtcagctccttgaacgactc 740 ||| | || ||| ||||| || |||||||| ||||||||||||||||||||||| ||||| Sbjct: 2051 gtccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactc 1992 Query: 741 cttgaggtccttgagc 756 |||||||||||||||| Sbjct: 1991 cttgaggtccttgagc 1976 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 129 aaaaatggacgtccctcaaaaccatcacattt 160 ||||||||||||||||| |||||||||||||| Sbjct: 2602 aaaaatggacgtccctcgaaaccatcacattt 2571
>gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence Length = 1546 Score = 492 bits (248), Expect = e-136 Identities = 329/356 (92%) Strand = Plus / Minus Query: 328 gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 387 |||||||||||||||||||||| ||||||||||||| ||||||||| ||||| || ||| Sbjct: 1240 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1181 Query: 388 ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 447 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1180 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1121 Query: 448 gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 507 || |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1120 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1061 Query: 508 atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 567 |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1060 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 1001 Query: 568 gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccatacttg 627 | ||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||| Sbjct: 1000 gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtacttg 941 Query: 628 gaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagagtc 683 ||||||||||| || |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 940 gaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcaccgagtc 885 Score = 97.6 bits (49), Expect = 5e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 697 tccagggccttcttncaccagtcggtcagctccttgaacgactccttgaggtccttgagc 756 |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 871 tccagggccttcttccaccagtcagtcagctccttgaacgactccttgagctccttgagc 812
>gb|BT016887.1| Zea mays clone Contig720 mRNA sequence Length = 719 Score = 474 bits (239), Expect = e-130 Identities = 332/363 (91%) Strand = Plus / Plus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 338 cacggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgc 397 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 || ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 398 gaactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccag 457 Query: 441 cctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctc 500 |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 458 cctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctc 517 Query: 501 cttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctg 560 ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 518 cttgatgatggggtgcctggggttgatctccaccaccctcttgccgcgcatgtacgcctg 577 Query: 561 cttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcc 620 |||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||| || Sbjct: 578 cttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccaccc 637 Query: 621 atacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacaga 680 |||||||||||||| || || ||||||||| |||||||||| |||||| |||||| || Sbjct: 638 gtacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcaccga 697 Query: 681 gtc 683 ||| Sbjct: 698 gtc 700
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 351 bits (177), Expect = 2e-93 Identities = 260/288 (90%) Strand = Plus / Plus Query: 469 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 528 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 9854 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 9913 Query: 529 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 588 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 9914 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 9973 Query: 589 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 648 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 9974 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 10033 Query: 649 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctccgtgtccagggccttc 708 |||| | ||||||||||||||||||||| ||||| | || ||| ||||| || |||||| Sbjct: 10034 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 10093 Query: 709 ttncaccagtcggtcagctccttgaacgactccttgaggtccttgagc 756 || ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10094 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagc 10141 Score = 172 bits (87), Expect = 1e-39 Identities = 132/147 (89%) Strand = Plus / Plus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 9600 cacggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggc 9659 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 9660 gaagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccag 9719 Query: 441 cctcgccgtctgcttcaggccctcgct 467 | ||||||||||||||| || |||||| Sbjct: 9720 cttcgccgtctgcttcaagctctcgct 9746 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 129 aaaaatggacgtccctcaaaaccatcacattt 160 ||||||||||||||||| |||||||||||||| Sbjct: 9409 aaaaatggacgtccctcgaaaccatcacattt 9440
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 351 bits (177), Expect = 2e-93 Identities = 260/288 (90%) Strand = Plus / Plus Query: 469 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 528 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 29929148 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 29929207 Query: 529 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 588 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 29929208 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 29929267 Query: 589 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 648 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 29929268 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 29929327 Query: 649 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctccgtgtccagggccttc 708 |||| | ||||||||||||||||||||| ||||| | || ||| ||||| || |||||| Sbjct: 29929328 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 29929387 Query: 709 ttncaccagtcggtcagctccttgaacgactccttgaggtccttgagc 756 || ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 29929388 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagc 29929435 Score = 172 bits (87), Expect = 1e-39 Identities = 132/147 (89%) Strand = Plus / Plus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 29928894 cacggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggc 29928953 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 29928954 gaagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccag 29929013 Query: 441 cctcgccgtctgcttcaggccctcgct 467 | ||||||||||||||| || |||||| Sbjct: 29929014 cttcgccgtctgcttcaagctctcgct 29929040 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 129 aaaaatggacgtccctcaaaaccatcacattt 160 ||||||||||||||||| |||||||||||||| Sbjct: 29928703 aaaaatggacgtccctcgaaaccatcacattt 29928734
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 351 bits (177), Expect = 2e-93 Identities = 260/288 (90%) Strand = Plus / Plus Query: 469 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 528 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 5296 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 5355 Query: 529 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 588 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 5356 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 5415 Query: 589 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 648 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 5416 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 5475 Query: 649 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctccgtgtccagggccttc 708 |||| | ||||||||||||||||||||| ||||| | || ||| ||||| || |||||| Sbjct: 5476 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 5535 Query: 709 ttncaccagtcggtcagctccttgaacgactccttgaggtccttgagc 756 || ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5536 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagc 5583 Score = 172 bits (87), Expect = 1e-39 Identities = 132/147 (89%) Strand = Plus / Plus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 5042 cacggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggc 5101 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 5102 gaagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccag 5161 Query: 441 cctcgccgtctgcttcaggccctcgct 467 | ||||||||||||||| || |||||| Sbjct: 5162 cttcgccgtctgcttcaagctctcgct 5188 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 129 aaaaatggacgtccctcaaaaccatcacattt 160 ||||||||||||||||| |||||||||||||| Sbjct: 4851 aaaaatggacgtccctcgaaaccatcacattt 4882
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 351 bits (177), Expect = 2e-93 Identities = 260/288 (90%) Strand = Plus / Plus Query: 469 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 528 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 124661 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 124720 Query: 529 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 588 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 124721 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 124780 Query: 589 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 648 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 124781 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 124840 Query: 649 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctccgtgtccagggccttc 708 |||| | ||||||||||||||||||||| ||||| | || ||| ||||| || |||||| Sbjct: 124841 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 124900 Query: 709 ttncaccagtcggtcagctccttgaacgactccttgaggtccttgagc 756 || ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 124901 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagc 124948 Score = 172 bits (87), Expect = 1e-39 Identities = 132/147 (89%) Strand = Plus / Plus Query: 321 cacggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgc 380 |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 124407 cacggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggc 124466 Query: 381 aaagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccag 440 ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 124467 gaagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccag 124526 Query: 441 cctcgccgtctgcttcaggccctcgct 467 | ||||||||||||||| || |||||| Sbjct: 124527 cttcgccgtctgcttcaagctctcgct 124553 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 129 aaaaatggacgtccctcaaaaccatcacattt 160 ||||||||||||||||| |||||||||||||| Sbjct: 124216 aaaaatggacgtccctcgaaaccatcacattt 124247
>gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds Length = 2947 Score = 95.6 bits (48), Expect = 2e-16 Identities = 135/164 (82%) Strand = Plus / Minus Query: 520 gggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagg 579 ||||| ||||| || |||||||| ||||||||||| ||||||||||| || || || || Sbjct: 2135 gggttaatctcgagcaccctcttcccgcgcatgtatgcctgcttgctggcatcggaaaga 2076 Query: 580 gtctgtgcctgcatgatcttctccatgttggaactccatccatacttggaggtgaccacc 639 ||||| | |||||| |||||||||||||| | |||||| ||||| || || ||||| || Sbjct: 2075 gtctgagactgcataatcttctccatgtttgcactccaaccatatttcgatgtgacaaca 2016 Query: 640 acacagggggtgttgtgcagccggttgctgatcttcacagagtc 683 || || || ||||| | || ||||||||| |||||||| ||||| Sbjct: 2015 acgcaaggagtgttatccaaccggttgctaatcttcacggagtc 1972 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Minus Query: 724 agctccttgaacgactccttgaggtccttga 754 ||||||||||| ||||||||||| ||||||| Sbjct: 1931 agctccttgaaggactccttgagatccttga 1901
>ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.1 mRNA, complete cds Length = 2707 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 502 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 561 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148 Query: 562 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 621 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088 Query: 622 tacttgga 629 ||||||| Sbjct: 2087 aacttgga 2080
>ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.2 mRNA, complete cds Length = 2707 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 502 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 561 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148 Query: 562 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 621 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088 Query: 622 tacttgga 629 ||||||| Sbjct: 2087 aacttgga 2080
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 502 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 561 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 76717 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 76776 Query: 562 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 621 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 76777 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 76836 Query: 622 tacttgga 629 ||||||| Sbjct: 76837 aacttgga 76844
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project) Length = 108459 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 502 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 561 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 3355 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 3414 Query: 562 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 621 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 3415 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 3474 Query: 622 tacttgga 629 ||||||| Sbjct: 3475 aacttgga 3482
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 502 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 561 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 20012 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 20071 Query: 562 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 621 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 20072 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 20131 Query: 622 tacttgga 629 ||||||| Sbjct: 20132 aacttgga 20139
>gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, complete cds Length = 2702 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 502 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 561 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2201 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2142 Query: 562 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 621 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2141 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2082 Query: 622 tacttgga 629 ||||||| Sbjct: 2081 aacttgga 2074
>gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, complete cds Length = 2472 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 502 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 561 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2153 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2094 Query: 562 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 621 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2093 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2034 Query: 622 tacttgga 629 ||||||| Sbjct: 2033 aacttgga 2026
>dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, complete cds Length = 2674 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 502 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 561 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2193 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2134 Query: 562 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 621 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2133 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2074 Query: 622 tacttgga 629 ||||||| Sbjct: 2073 aacttgga 2066
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 502 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 561 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 851 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 792 Query: 562 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 621 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 791 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 732 Query: 622 tacttgga 629 ||||||| Sbjct: 731 aacttgga 724
>dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, complete cds Length = 6679 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 502 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 561 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 5136 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 5077 Query: 562 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 621 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 5076 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 5017 Query: 622 tacttgga 629 ||||||| Sbjct: 5016 aacttgga 5009
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 493 cggagctccttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatg 552 ||||| ||||||||||| ||||| | || |||||||| || |||||||||||||||||| Sbjct: 80122 cggagttccttgatgatagggtgtctaggattgatctcaagaaccctcttgccgcgcatg 80063 Query: 553 tacgcctgctt 563 || || ||||| Sbjct: 80062 tatgcttgctt 80052
>gb|DQ084238.1| Leishmania donovani chagasi clone LCPE01EX020024H11.g 83 kDa heat shock protein (hsp83) mRNA, partial cds Length = 564 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Minus Query: 496 agctccttgatgatggggtgccgggggttgatctcca 532 |||||||||||||||||||| | |||||||| ||||| Sbjct: 136 agctccttgatgatggggtgtctggggttgagctcca 100
>gb|DQ084237.1| Leishmania donovani chagasi clone LCPE01EX020050A04.g 83 kDa heat shock protein (hsp83) mRNA, partial cds Length = 597 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Minus Query: 496 agctccttgatgatggggtgccgggggttgatctcca 532 |||||||||||||||||||| | |||||||| ||||| Sbjct: 513 agctccttgatgatggggtgtctggggttgagctcca 477
>emb|X87770.2|LIHSP83GN Leishmania infantum hsp83-1 gene for heat shock protein 83-1 and hsp83-2 gene for heat shock protein 83-2 Length = 3744 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Minus Query: 496 agctccttgatgatggggtgccgggggttgatctcca 532 |||||||||||||||||||| | |||||||| ||||| Sbjct: 1914 agctccttgatgatggggtgtctggggttgagctcca 1878
>gb|AY103538.1| Zea mays PCO150589 mRNA sequence Length = 2534 Score = 48.1 bits (24), Expect = 0.043 Identities = 42/48 (87%) Strand = Plus / Minus Query: 563 tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttgg 610 |||||| |||| ||||| |||||||| ||||||| |||||||||||| Sbjct: 1968 tgctcgagtccctcagggcctgtgccttcatgatcctctccatgttgg 1921
>emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8, COMPLETE SEQUENCE Length = 165916 Score = 48.1 bits (24), Expect = 0.043 Identities = 39/44 (88%) Strand = Plus / Minus Query: 582 ctgtgcctgcatgatcttctccatgttggaactccatccatact 625 |||||||| ||||||| |||||||||||| | |||| ||||||| Sbjct: 33488 ctgtgccttcatgatcctctccatgttggcagtccaaccatact 33445 Score = 48.1 bits (24), Expect = 0.043 Identities = 39/44 (88%) Strand = Plus / Minus Query: 582 ctgtgcctgcatgatcttctccatgttggaactccatccatact 625 |||||||| ||||||| |||||||||||| | |||| ||||||| Sbjct: 22847 ctgtgccttcatgatcctctccatgttggcagtccaaccatact 22804
>gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta (hsp90 beta) mRNA, complete cds Length = 2625 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Minus Query: 576 cagggtctgtgcctgcatgatcttctccatgttgg 610 ||||| |||||||| ||||||| |||||||||||| Sbjct: 1909 cagggcctgtgccttcatgatcctctccatgttgg 1875
>gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds Length = 2397 Score = 46.1 bits (23), Expect = 0.17 Identities = 53/63 (84%) Strand = Plus / Minus Query: 563 tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccat 622 |||||| |||| ||||| ||| |||| ||||||| |||||||||||| | |||| |||| Sbjct: 1898 tgctcgtgtccctcagggcctgggccttcatgatcctctccatgttggcagtccagccat 1839 Query: 623 act 625 ||| Sbjct: 1838 act 1836
>gb|AF384808.1| Cryptococcus neoformans var. grubii heat-shock protein 90 gene, partial cds Length = 2391 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Minus Query: 495 gagctccttgatgatggggtgccgggggttgatctcca 532 ||||||||||||||||||||| |||||||| ||||| Sbjct: 2154 gagctccttgatgatggggtgagaggggttgagctcca 2117
>gb|AY118578.1| Drosophila melanogaster LD43460 full insert cDNA Length = 1210 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Minus Query: 496 agctccttgatgatggggtgccgggggttgatctccag 533 |||| |||||||||||||||| |||||||||||||| Sbjct: 910 agcttcttgatgatggggtgctttgggttgatctccag 873
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 171 atttctttctaatgaaatgaaa 192 |||||||||||||||||||||| Sbjct: 1261169 atttctttctaatgaaatgaaa 1261148
>ref|NM_058091.3| Drosophila melanogaster Trap1 CG3152-RA (Trap1), mRNA Length = 2478 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Minus Query: 496 agctccttgatgatggggtgccgggggttgatctccag 533 |||| |||||||||||||||| |||||||||||||| Sbjct: 2197 agcttcttgatgatggggtgctttgggttgatctccag 2160
>gb|AY122624.1| Dimastigella trypaniformis strain Ulm heat shock protein 90 (HSP-90) gene, partial cds Length = 1873 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Minus Query: 496 agctccttgatgatggggtgccgggggttgatctccag 533 |||||||||||||||| ||| | |||||||||||||| Sbjct: 1740 agctccttgatgatggcgtggctcgggttgatctccag 1703
>gb|AF115775.2|AF115775 Drosophila melanogaster Hsp90-related protein TRAP1 mRNA, complete cds Length = 2162 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Minus Query: 496 agctccttgatgatggggtgccgggggttgatctccag 533 |||| |||||||||||||||| |||||||||||||| Sbjct: 2000 agcttcttgatgatggggtgctttgggttgatctccag 1963
>gb|BT001316.1| Drosophila melanogaster AT15050 full insert cDNA Length = 2475 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Minus Query: 496 agctccttgatgatggggtgccgggggttgatctccag 533 |||| |||||||||||||||| |||||||||||||| Sbjct: 2193 agcttcttgatgatggggtgctttgggttgatctccag 2156
>gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence Length = 2179 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 582 ctgtgcctgcatgatcttctccatgttgg 610 |||||||| ||||||| |||||||||||| Sbjct: 1704 ctgtgccttcatgatcctctccatgttgg 1676
>gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosome 12, complete sequence Length = 241834 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 tggaactccatccatacttgg 628 ||||||||||||||||||||| Sbjct: 152955 tggaactccatccatacttgg 152935
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ctaatgaaatgaaagctaaat 199 ||||||||||||||||||||| Sbjct: 1421262 ctaatgaaatgaaagctaaat 1421242
>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11 Length = 346357 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 agtccttggggtccggcaggt 403 ||||||||||||||||||||| Sbjct: 266763 agtccttggggtccggcaggt 266743
>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222553 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ttctaatgaaatgaaagctaa 197 ||||||||||||||||||||| Sbjct: 112594 ttctaatgaaatgaaagctaa 112614
>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence Length = 183177 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 aaccatcacatttccagtcca 168 ||||||||||||||||||||| Sbjct: 132650 aaccatcacatttccagtcca 132630
>gb|AY109427.1| Zea mays CL1264_2 mRNA sequence Length = 1267 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 582 ctgtgcctgcatgatcttctccatgttgg 610 |||||||| ||||||| |||||||||||| Sbjct: 687 ctgtgccttcatgatcctctccatgttgg 659
>gb|M60499.1|HUMPROFILC Human profilaggrin mRNA, 5' end Length = 1496 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 ccctcgctgtcgctgtcctgg 480 ||||||||||||||||||||| Sbjct: 349 ccctcgctgtcgctgtcctgg 329
>gb|AC163634.4| Mus musculus BAC clone RP23-152O2 from chromosome 12, complete sequence Length = 199499 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 608 tggaactccatccatacttgg 628 ||||||||||||||||||||| Sbjct: 49214 tggaactccatccatacttgg 49234
>gb|M73492.1|LEIHSP90 Leishmania donovani heat shock protein 90 mRNA, 3' end Length = 2197 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 500 ccttgatgatggggtgccgggggttgatctcca 532 |||||||||||||||| | |||||||| ||||| Sbjct: 1105 ccttgatgatggggtgtctggggttgagctcca 1073
>gb|M92926.1|LEIHSP01 Leishmania amazonensis heat shock protein 83 gene, complete cds Length = 2106 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 496 agctccttgatgatggggtgccgggggttgatctcca 532 |||||||||||||||||||| |||||||| ||||| Sbjct: 1853 agctccttgatgatggggtgtttggggttgagctcca 1817 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,705,939 Number of Sequences: 3902068 Number of extensions: 4705939 Number of successful extensions: 104040 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103905 Number of HSP's gapped (non-prelim): 133 length of query: 756 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 733 effective length of database: 17,143,297,704 effective search space: 12566037217032 effective search space used: 12566037217032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)