| Clone Name | rbags24k18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB232382.1| Oryza sativa (japonica cultivar-group) OsFAD7-1 mRNA for plastid omega-3 fatty acid desaturase, complete cds Length = 1755 Score = 222 bits (112), Expect = 1e-54 Identities = 161/178 (90%) Strand = Plus / Minus Query: 383 agtaggtggaatggganaggagccgacttctctggttctttgtagtacttgccaagcact 442 |||| ||||||||||| ||||| || |||||||| ||||||||||| || || |||||| Sbjct: 1384 agtaagtggaatgggaggggagctgatttctctggctctttgtagtattttcccagcact 1325 Query: 443 ggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatga 502 ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 1324 ggttttgctgcctcagtcgcctcaacaagatggtaatgtgggatttgtgggaaaagatga 1265 Query: 503 tgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccgat 560 ||||||||||| || |||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 1264 tgaatgacatgggttccaatgtcatggtgtacgttgttgatccacccgtagtcccgat 1207 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 312 tttggtagtaaactatgtctccggtgtcgctaacatagtg 351 |||||||||| |||| |||||||| ||| ||||||||||| Sbjct: 1455 tttggtagtacactacgtctccggcgtcactaacatagtg 1416
>dbj|AK058242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-H04, full insert sequence Length = 999 Score = 222 bits (112), Expect = 1e-54 Identities = 161/178 (90%) Strand = Plus / Minus Query: 383 agtaggtggaatggganaggagccgacttctctggttctttgtagtacttgccaagcact 442 |||| ||||||||||| ||||| || |||||||| ||||||||||| || || |||||| Sbjct: 719 agtaagtggaatgggaggggagctgatttctctggctctttgtagtattttcccagcact 660 Query: 443 ggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatga 502 ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 659 ggttttgctgcctcagtcgcctcaacaagatggtaatgtgggatttgtgggaaaagatga 600 Query: 503 tgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccgat 560 ||||||||||| || |||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 599 tgaatgacatgggttccaatgtcatggtgtacgttgttgatccacccgtagtcccgat 542 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 312 tttggtagtaaactatgtctccggtgtcgctaacatagtg 351 |||||||||| |||| |||||||||||| ||||||||||| Sbjct: 790 tttggtagtacactacgtctccggtgtcactaacatagtg 751
>gb|AY111307.1| Zea mays CL1251_1 mRNA sequence Length = 1636 Score = 170 bits (86), Expect = 3e-39 Identities = 144/164 (87%) Strand = Plus / Minus Query: 395 ggganaggagccgacttctctggttctttgtagtacttgccaagcactggttttgctgcc 454 |||| |||| ||||||||| |||||||||||||||||||||||| || |||||||||||| Sbjct: 1223 gggagaggacccgacttctttggttctttgtagtacttgccaagaaccggttttgctgcc 1164 Query: 455 tcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatga 514 || |||||||| | ||||| |||||||||||||| |||||||| ||||| ||||||||| Sbjct: 1163 tcggtcgcctcaatgagatggtaatgcgggatttgagggaaaaggtgatggatgacatga 1104 Query: 515 gtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccg 558 || |||||||||||||| || ||||| |||| || |||||||| Sbjct: 1103 gttccaatgtcatggtggatattgttaatcagtccatagtcccg 1060 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 312 tttggtagtaaactatgtctccggtgtcgctaacatagtg 351 |||||||||| |||| |||||||||||||||||||||||| Sbjct: 1306 tttggtagtacactacgtctccggtgtcgctaacatagtg 1267
>dbj|D63953.1| Zea mays FAD8 mRNA for fatty acid desaturase, partial cds Length = 1494 Score = 170 bits (86), Expect = 3e-39 Identities = 144/164 (87%) Strand = Plus / Minus Query: 395 ggganaggagccgacttctctggttctttgtagtacttgccaagcactggttttgctgcc 454 |||| |||| ||||||||| |||||||||||||||||||||||| || |||||||||||| Sbjct: 1074 gggagaggacccgacttctttggttctttgtagtacttgccaagaaccggttttgctgcc 1015 Query: 455 tcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatga 514 || |||||||| | ||||| |||||||||||||| |||||||| ||||| ||||||||| Sbjct: 1014 tcggtcgcctcaatgagatggtaatgcgggatttgagggaaaaggtgatggatgacatga 955 Query: 515 gtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccg 558 || |||||||||||||| || ||||| |||| || |||||||| Sbjct: 954 gttccaatgtcatggtggatattgttaatcagtccatagtcccg 911 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 312 tttggtagtaaactatgtctccggtgtcgctaacatagtg 351 |||||||||| |||| |||||||||||||||||||||||| Sbjct: 1157 tttggtagtacactacgtctccggtgtcgctaacatagtg 1118
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 139 bits (70), Expect = 1e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 460 cgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgcc 519 |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || || Sbjct: 10052766 cgcctcaacaagatggtaatgtgggatttgtgggaaaagatgatgaatgacatgggttcc 10052825 Query: 520 aatgtcatggtgtatnttgttgatcaacccgtagtcccgat 560 |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 10052826 aatgtcatggtgtacgttgttgatccacccgtagtcccgat 10052866 Score = 85.7 bits (43), Expect = 1e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 383 agtaggtggaatggganaggagccgacttctctggttctttgtagtacttgccaagcact 442 |||| ||||||||||| ||||| || |||||||| ||||||||||| || || |||||| Sbjct: 10052599 agtaagtggaatgggaggggagctgatttctctggctctttgtagtattttcccagcact 10052658 Query: 443 ggttttgctgcctcagtc 460 |||||||||||||||||| Sbjct: 10052659 ggttttgctgcctcagtc 10052676 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 312 tttggtagtaaactatgtctccggtgtcgctaacatagtg 351 |||||||||| |||| |||||||||||| ||||||||||| Sbjct: 10052528 tttggtagtacactacgtctccggtgtcactaacatagtg 10052567
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone OSJNBb0027B12, from chromosome 3, complete sequence Length = 127426 Score = 139 bits (70), Expect = 1e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 460 cgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgcc 519 |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || || Sbjct: 102682 cgcctcaacaagatggtaatgtgggatttgtgggaaaagatgatgaatgacatgggttcc 102741 Query: 520 aatgtcatggtgtatnttgttgatcaacccgtagtcccgat 560 |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 102742 aatgtcatggtgtacgttgttgatccacccgtagtcccgat 102782 Score = 85.7 bits (43), Expect = 1e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 383 agtaggtggaatggganaggagccgacttctctggttctttgtagtacttgccaagcact 442 |||| ||||||||||| ||||| || |||||||| ||||||||||| || || |||||| Sbjct: 102515 agtaagtggaatgggaggggagctgatttctctggctctttgtagtattttcccagcact 102574 Query: 443 ggttttgctgcctcagtc 460 |||||||||||||||||| Sbjct: 102575 ggttttgctgcctcagtc 102592 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 312 tttggtagtaaactatgtctccggtgtcgctaacatagtg 351 |||||||||| |||| |||||||||||| ||||||||||| Sbjct: 102444 tttggtagtacactacgtctccggtgtcactaacatagtg 102483
>dbj|AB232384.1| Oryza sativa (japonica cultivar-group) OsFAD7-1 gene for plastid omega-3 fatty acid desaturase, complete cds Length = 5636 Score = 139 bits (70), Expect = 1e-29 Identities = 93/101 (92%) Strand = Plus / Minus Query: 460 cgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgcc 519 |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || || Sbjct: 4557 cgcctcaacaagatggtaatgtgggatttgtgggaaaagatgatgaatgacatgggttcc 4498 Query: 520 aatgtcatggtgtatnttgttgatcaacccgtagtcccgat 560 |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 4497 aatgtcatggtgtacgttgttgatccacccgtagtcccgat 4457 Score = 85.7 bits (43), Expect = 1e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 383 agtaggtggaatggganaggagccgacttctctggttctttgtagtacttgccaagcact 442 |||| ||||||||||| ||||| || |||||||| ||||||||||| || || |||||| Sbjct: 4724 agtaagtggaatgggaggggagctgatttctctggctctttgtagtattttcccagcact 4665 Query: 443 ggttttgctgcctcagtc 460 |||||||||||||||||| Sbjct: 4664 ggttttgctgcctcagtc 4647 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 312 tttggtagtaaactatgtctccggtgtcgctaacatagtg 351 |||||||||| |||| |||||||| ||| ||||||||||| Sbjct: 4795 tttggtagtacactacgtctccggcgtcactaacatagtg 4756
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 139 bits (70), Expect = 1e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 460 cgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgcc 519 |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || || Sbjct: 10050887 cgcctcaacaagatggtaatgtgggatttgtgggaaaagatgatgaatgacatgggttcc 10050946 Query: 520 aatgtcatggtgtatnttgttgatcaacccgtagtcccgat 560 |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 10050947 aatgtcatggtgtacgttgttgatccacccgtagtcccgat 10050987 Score = 85.7 bits (43), Expect = 1e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 383 agtaggtggaatggganaggagccgacttctctggttctttgtagtacttgccaagcact 442 |||| ||||||||||| ||||| || |||||||| ||||||||||| || || |||||| Sbjct: 10050720 agtaagtggaatgggaggggagctgatttctctggctctttgtagtattttcccagcact 10050779 Query: 443 ggttttgctgcctcagtc 460 |||||||||||||||||| Sbjct: 10050780 ggttttgctgcctcagtc 10050797 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 312 tttggtagtaaactatgtctccggtgtcgctaacatagtg 351 |||||||||| |||| |||||||||||| ||||||||||| Sbjct: 10050649 tttggtagtacactacgtctccggtgtcactaacatagtg 10050688
>dbj|D43688.3| Triticum aestivum TaFAD7 mRNA for plastid omega-3 fatty acid desaturase, partial cds Length = 1518 Score = 127 bits (64), Expect = 4e-26 Identities = 117/135 (86%) Strand = Plus / Minus Query: 423 tgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcg 482 |||||||||| || |||||||| || || |||||||||||||| || ||||| ||||||| Sbjct: 994 tgtagtacttccccagcactggcttcgccgcctcagtcgcctccactagatggtaatgcg 935 Query: 483 ggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttga 542 ||||||| ||||||||||| || || || ||||| |||||||||||||| || ||||||| Sbjct: 934 ggatttgcgggaaaagatggtggatcacgtgagtcccaatgtcatggtggatgttgttga 875 Query: 543 tcaacccgtagtccc 557 | |||||||||||| Sbjct: 874 gccacccgtagtccc 860 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 312 tttggtagtaaactatgtctccggtgtcgctaacatagtg 351 |||||||||| | |||||||||||||||||| || ||||| Sbjct: 1105 tttggtagtagattatgtctccggtgtcgctgacgtagtg 1066
>gb|AY107103.1| Zea mays PCO145451 mRNA sequence Length = 1520 Score = 125 bits (63), Expect = 2e-25 Identities = 131/154 (85%) Strand = Plus / Minus Query: 405 ccgacttctctggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcct 464 ||||||||| || |||||||||||||||||||| || || ||||||||||| ||||||| Sbjct: 949 ccgacttcttcggctctttgtagtacttgccaagaaccggctttgctgcctcggtcgcct 890 Query: 465 cgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgt 524 ||| ||||| ||||||||||| || ||||| || ||||| ||||||||||| || |||| Sbjct: 889 cgatgagatggtaatgcgggatctgagggaagaggtgatggatgacatgagttccgatgt 830 Query: 525 catggtgtatnttgttgatcaacccgtagtcccg 558 | || || || ||||||||| | ||||||||||| Sbjct: 829 cgtgatggatgttgttgatccatccgtagtcccg 796
>dbj|D63952.1| Zea mays FAD7 mRNA for fatty acid desaturase, partial cds Length = 1069 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Minus Query: 419 tctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataa 478 |||||||||||||||||||| || || ||||||||||| |||||||||| ||||| ||| Sbjct: 643 tctttgtagtacttgccaagaaccggctttgctgcctcggtcgcctcgatgagatggtaa 584 Query: 479 tgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttg 538 |||||||| || ||||| || ||||| ||||||||||| || ||||| || || || ||| Sbjct: 583 tgcgggatctgagggaagaggtgatggatgacatgagttccgatgtcgtgatggatgttg 524 Query: 539 ttgatcaacccgtagtcccg 558 |||||| | ||||||||||| Sbjct: 523 ttgatccatccgtagtcccg 504
>dbj|AK071185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083P12, full insert sequence Length = 1811 Score = 109 bits (55), Expect = 1e-20 Identities = 129/154 (83%) Strand = Plus / Minus Query: 407 gacttctctggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcg 466 ||||||||||| || ||||||| |||| |||||||| ||||||||| || || || Sbjct: 1232 gacttctctggctccctgtagtatctgcccagcactggccttgctgcctttgttgcttct 1173 Query: 467 acaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtca 526 || || |||||||| || ||||| |||||||| || || |||||||| |||||||||||| Sbjct: 1172 acgaggtgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtca 1113 Query: 527 tggtgtatnttgttgatcaacccgtagtcccgat 560 ||||| || ||||||||| ||||||||||||||| Sbjct: 1112 tggtggatgttgttgatccacccgtagtcccgat 1079
>dbj|D78505.1|RICPA11 Oryza sativa (japonica cultivar-group) mRNA for w-3 fatty acid desaturase, partial cds Length = 1208 Score = 109 bits (55), Expect = 1e-20 Identities = 129/154 (83%) Strand = Plus / Minus Query: 407 gacttctctggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcg 466 ||||||||||| || ||||||| | || ||||||||| ||||||||| || || || Sbjct: 662 gacttctctggctccctgtagtatctacccagcactggtcttgctgcctttgttgcttct 603 Query: 467 acaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtca 526 || || |||||||| || ||||| |||||||| || || |||||||| |||||||||||| Sbjct: 602 acgaggtgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtca 543 Query: 527 tggtgtatnttgttgatcaacccgtagtcccgat 560 ||||| || ||||||||| ||||||||||||||| Sbjct: 542 tggtggatgttgttgatccacccgtagtcccgat 509
>ref|XM_479619.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1604 Score = 97.6 bits (49), Expect = 4e-17 Identities = 96/112 (85%) Strand = Plus / Minus Query: 446 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 505 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1145 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1086 Query: 506 atgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtccc 557 |||||||| || || ||||| ||||| || ||||||||| |||| ||||||| Sbjct: 1085 atgacatgtgtcccgatgtcgtggtggatgttgttgatccacccatagtccc 1034
>ref|XM_506593.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.134-2 mRNA Length = 1617 Score = 97.6 bits (49), Expect = 4e-17 Identities = 96/112 (85%) Strand = Plus / Minus Query: 446 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 505 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1133 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1074 Query: 506 atgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtccc 557 |||||||| || || ||||| ||||| || ||||||||| |||| ||||||| Sbjct: 1073 atgacatgtgtcccgatgtcgtggtggatgttgttgatccacccatagtccc 1022
>ref|NM_185577.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1615 Score = 97.6 bits (49), Expect = 4e-17 Identities = 96/112 (85%) Strand = Plus / Minus Query: 446 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 505 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1135 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1076 Query: 506 atgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtccc 557 |||||||| || || ||||| ||||| || ||||||||| |||| ||||||| Sbjct: 1075 atgacatgtgtcccgatgtcgtggtggatgttgttgatccacccatagtccc 1024
>gb|AY135566.1| Betula pendula clone fad3 microsomal omega-3 fatty acid desaturase mRNA, complete cds Length = 1588 Score = 97.6 bits (49), Expect = 4e-17 Identities = 99/116 (85%) Strand = Plus / Minus Query: 425 tagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcggg 484 |||||||| |||||||||||||| ||||| | |||||| || || |||||||| || ||| Sbjct: 1185 tagtactttccaagcactggtttagctgcattagtcgcttccactagatgatagtgtggg 1126 Query: 485 atttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgtt 540 ||||| ||||| |||||||| || ||||| |||||||| |||||||| || ||||| Sbjct: 1125 atttgagggaagagatgatgtataacatgggtgccaatatcatggtggatgttgtt 1070
>dbj|AB232383.1| Oryza sativa (japonica cultivar-group) OsFAD7-2 mRNA for plastid omega-3 fatty acid desaturase, complete cds Length = 1630 Score = 97.6 bits (49), Expect = 4e-17 Identities = 96/112 (85%) Strand = Plus / Minus Query: 446 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 505 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1130 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1071 Query: 506 atgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtccc 557 |||||||| || || ||||| ||||| || ||||||||| |||| ||||||| Sbjct: 1070 atgacatgtgtcccgatgtcgtggtggatgttgttgatccacccatagtccc 1019
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 97.6 bits (49), Expect = 4e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 532 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 226002 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 226061 Query: 533 atnttgttgatcaacccgtagtcccgat 560 || ||||||||| ||||||||||||||| Sbjct: 226062 atgttgttgatccacccgtagtcccgat 226089
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 97.6 bits (49), Expect = 4e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 532 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 199527 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 199586 Query: 533 atnttgttgatcaacccgtagtcccgat 560 || ||||||||| ||||||||||||||| Sbjct: 199587 atgttgttgatccacccgtagtcccgat 199614
>gb|AY848920.1| Oryza sativa (japonica cultivar-group) FAD8 mRNA, complete cds Length = 1242 Score = 97.6 bits (49), Expect = 4e-17 Identities = 96/112 (85%) Strand = Plus / Minus Query: 446 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 505 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1091 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1032 Query: 506 atgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtccc 557 |||||||| || || ||||| ||||| || ||||||||| |||| ||||||| Sbjct: 1031 atgacatgtgtcccgatgtcgtggtggatgttgttgatccacccatagtccc 980
>dbj|AK098930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025C20, full insert sequence Length = 1612 Score = 97.6 bits (49), Expect = 4e-17 Identities = 96/112 (85%) Strand = Plus / Minus Query: 446 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 505 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1134 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1075 Query: 506 atgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtccc 557 |||||||| || || ||||| ||||| || ||||||||| |||| ||||||| Sbjct: 1074 atgacatgtgtcccgatgtcgtggtggatgttgttgatccacccatagtccc 1023
>dbj|AK062022.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F12, full insert sequence Length = 1604 Score = 97.6 bits (49), Expect = 4e-17 Identities = 96/112 (85%) Strand = Plus / Minus Query: 446 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 505 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1145 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1086 Query: 506 atgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtccc 557 |||||||| || || ||||| ||||| || ||||||||| |||| ||||||| Sbjct: 1085 atgacatgtgtcccgatgtcgtggtggatgttgttgatccacccatagtccc 1034
>dbj|AK061531.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E06, full insert sequence Length = 1617 Score = 97.6 bits (49), Expect = 4e-17 Identities = 96/112 (85%) Strand = Plus / Minus Query: 446 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 505 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1133 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1074 Query: 506 atgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtccc 557 |||||||| || || ||||| ||||| || ||||||||| |||| ||||||| Sbjct: 1073 atgacatgtgtcccgatgtcgtggtggatgttgttgatccacccatagtccc 1022
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 97.6 bits (49), Expect = 4e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 532 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 199527 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 199586 Query: 533 atnttgttgatcaacccgtagtcccgat 560 || ||||||||| ||||||||||||||| Sbjct: 199587 atgttgttgatccacccgtagtcccgat 199614
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 97.6 bits (49), Expect = 4e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 532 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 226002 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 226061 Query: 533 atnttgttgatcaacccgtagtcccgat 560 || ||||||||| ||||||||||||||| Sbjct: 226062 atgttgttgatccacccgtagtcccgat 226089
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 97.6 bits (49), Expect = 4e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 532 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 105466 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 105407 Query: 533 atnttgttgatcaacccgtagtcccgat 560 || ||||||||| ||||||||||||||| Sbjct: 105406 atgttgttgatccacccgtagtcccgat 105379
>emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb0068K19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 96667 Score = 97.6 bits (49), Expect = 4e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 532 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 49254 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 49195 Query: 533 atnttgttgatcaacccgtagtcccgat 560 || ||||||||| ||||||||||||||| Sbjct: 49194 atgttgttgatccacccgtagtcccgat 49167
>dbj|D78506.1|RICP181X2 Oryza sativa (indica cultivar-group) gene for w-3 fatty acid desaturase, complete cds (exon1-8) Length = 4544 Score = 97.6 bits (49), Expect = 4e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 532 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 3786 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 3727 Query: 533 atnttgttgatcaacccgtagtcccgat 560 || ||||||||| ||||||||||||||| Sbjct: 3726 atgttgttgatccacccgtagtcccgat 3699
>gb|L22963.1|BNACPFADD Brassicca napus chloroplast omega-3 fatty acid desaturase (Fadd) mRNA, complete cds Length = 1416 Score = 95.6 bits (48), Expect = 1e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1043 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgagggaaaaga 984 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccg 558 ||||| || |||||||| |||||||| || || || ||||||||||| ||||||||||| Sbjct: 983 tgatgtatcacatgagttccaatgtcgtgatggatgttgttgatcaatccgtagtcccg 925
>gb|DQ116425.1| Linum usitatissimum fatty acid desaturase 3B (FAD3B) mRNA, complete cds Length = 1328 Score = 93.7 bits (47), Expect = 6e-16 Identities = 109/130 (83%) Strand = Plus / Minus Query: 423 tgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcg 482 |||||||||| || ||||| | || ||||||| |||||| || ||||| ||||| || | Sbjct: 1033 tgtagtacttccccagcacgtgcttcgctgcctgagtcgcttccacaaggtgatagtgtg 974 Query: 483 ggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttga 542 | ||||| ||||| ||||| ||||||||||| ||||||||||||||||| || ||||||| Sbjct: 973 gcatttgagggaagagatggtgaatgacatgggtgccaatgtcatggtggatgttgttga 914 Query: 543 tcaacccgta 552 | | |||||| Sbjct: 913 tgaccccgta 904
>gb|DQ116424.1| Linum usitatissimum fatty acid desaturase 3A (FAD3A) mRNA, complete cds Length = 1475 Score = 93.7 bits (47), Expect = 6e-16 Identities = 135/165 (81%) Strand = Plus / Minus Query: 388 gtggaatggganaggagccgacttctctggttctttgtagtacttgccaagcactggttt 447 ||||||||||| ||| | || |||| |||||| |||||||||| || ||||| | || Sbjct: 1116 gtggaatgggaaaggccctgatttcttcggttctctgtagtacttccccagcacgtgctt 1057 Query: 448 tgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaat 507 ||||||| |||||| ||||| || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 1056 cgctgcctgagtcgcttcgactaggtgatagtgtggcatttgagggaagagatggtgaat 997 Query: 508 gacatgagtgccaatgtcatggtgtatnttgttgatcaacccgta 552 ||||| ||||||||||||||||| || |||||||| | |||||| Sbjct: 996 aacatgggtgccaatgtcatggtggatgttgttgatgaccccgta 952
>ref|NM_120640.2| Arabidopsis thaliana FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase AT5G05580 (FAD8) mRNA, complete cds Length = 2037 Score = 91.7 bits (46), Expect = 2e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 416 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 475 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1356 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1297 Query: 476 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatn 535 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1296 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1237 Query: 536 ttgttgatcaacccgtagtcccgat 560 || |||||| | |||||||| |||| Sbjct: 1236 ttattgatccatccgtagtcacgat 1212
>gb|AY093304.1| Arabidopsis thaliana temperature-sensitive omega-3 fatty acid desaturase, chloroplast precursor (At5g05580) mRNA, complete cds Length = 1402 Score = 91.7 bits (46), Expect = 2e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 416 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 475 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1172 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1113 Query: 476 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatn 535 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1112 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1053 Query: 536 ttgttgatcaacccgtagtcccgat 560 || |||||| | |||||||| |||| Sbjct: 1052 ttattgatccatccgtagtcacgat 1028
>gb|AY078043.1| Arabidopsis thaliana AT5g05580/MOP10_12 mRNA, complete cds Length = 1308 Score = 91.7 bits (46), Expect = 2e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 416 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 475 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1172 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1113 Query: 476 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatn 535 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1112 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1053 Query: 536 ttgttgatcaacccgtagtcccgat 560 || |||||| | |||||||| |||| Sbjct: 1052 ttattgatccatccgtagtcacgat 1028
>gb|AF361837.1| Arabidopsis thaliana AT5g05580/MOP10_12 mRNA, complete cds Length = 1656 Score = 91.7 bits (46), Expect = 2e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 416 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 475 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1356 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1297 Query: 476 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatn 535 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1296 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1237 Query: 536 ttgttgatcaacccgtagtcccgat 560 || |||||| | |||||||| |||| Sbjct: 1236 ttattgatccatccgtagtcacgat 1212
>gb|AY062468.1| Arabidopsis thaliana temperature-sensitive omega-3 fatty acid desaturase, chloroplast precursor (At5g05580; MOP10.12) mRNA, complete cds Length = 1605 Score = 91.7 bits (46), Expect = 2e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 416 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 475 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1291 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1232 Query: 476 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatn 535 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1231 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1172 Query: 536 ttgttgatcaacccgtagtcccgat 560 || |||||| | |||||||| |||| Sbjct: 1171 ttattgatccatccgtagtcacgat 1147
>emb|BX831496.1|CNS09ZRR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZG10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1516 Score = 91.7 bits (46), Expect = 2e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 416 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 475 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1215 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1156 Query: 476 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatn 535 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1155 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1096 Query: 536 ttgttgatcaacccgtagtcccgat 560 || |||||| | |||||||| |||| Sbjct: 1095 ttattgatccatccgtagtcacgat 1071
>dbj|D17578.1|ATHFADIP1 Arabidopsis thaliana mRNA for plastid fatty acid desaturase, complete cds Length = 1621 Score = 91.7 bits (46), Expect = 2e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 416 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 475 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1309 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1250 Query: 476 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatn 535 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1249 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1190 Query: 536 ttgttgatcaacccgtagtcccgat 560 || |||||| | |||||||| |||| Sbjct: 1189 ttattgatccatccgtagtcacgat 1165
>gb|L27158.1|ATHFAD8A Arabidopsis thaliana omega-3 fatty acid desaturase (fad8) mRNA, complete cds Length = 1525 Score = 91.7 bits (46), Expect = 2e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 416 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 475 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1232 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1173 Query: 476 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatn 535 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1172 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1113 Query: 536 ttgttgatcaacccgtagtcccgat 560 || |||||| | |||||||| |||| Sbjct: 1112 ttattgatccatccgtagtcacgat 1088
>dbj|D84409.1| Zea mays FAD8 gene for fatty acid desaturase, partial cds Length = 3078 Score = 91.7 bits (46), Expect = 2e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 ||||| |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||| Sbjct: 2367 agatggtaatgcgggatttgagggaaaaggtgatggatgacatgagttccaatgtcatgg 2308 Query: 530 tgtatnttgttgatcaacccgtagtcccg 558 || || ||||| |||| || |||||||| Sbjct: 2307 tggatattgttaatcagtccatagtcccg 2279 Score = 85.7 bits (43), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 395 ggganaggagccgacttctctggttctttgtagtacttgccaagcactggttttgctgcc 454 |||| |||| ||||||||| |||||||||||||||||||||||| || |||||||||||| Sbjct: 2533 gggagaggacccgacttctttggttctttgtagtacttgccaagaaccggttttgctgcc 2474 Query: 455 tc 456 || Sbjct: 2473 tc 2472 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 312 tttggtagtaaactatgtctccggtgtcgctaacatagtg 351 |||||||||| |||| |||||||||||||||||||||||| Sbjct: 2616 tttggtagtacactacgtctccggtgtcgctaacatagtg 2577
>dbj|AB232385.1| Oryza sativa (japonica cultivar-group) OsFAD7-2 gene for plastid omega-3 fatty acid desaturase, complete cds Length = 5326 Score = 89.7 bits (45), Expect = 9e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 ||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||| Sbjct: 4033 agatggtaatgcgggatttgggggaaaagatggtgaatgacatgtgtcccgatgtcgtgg 3974 Query: 530 tgtatnttgttgatcaacccgtagtccc 557 || || ||||||||| |||| ||||||| Sbjct: 3973 tggatgttgttgatccacccatagtccc 3946
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 89.7 bits (45), Expect = 9e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 ||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||| Sbjct: 29479915 agatggtaatgcgggatttgggggaaaagatggtgaatgacatgtgtcccgatgtcgtgg 29479856 Query: 530 tgtatnttgttgatcaacccgtagtccc 557 || || ||||||||| |||| ||||||| Sbjct: 29479855 tggatgttgttgatccacccatagtccc 29479828
>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0627E10 Length = 163388 Score = 89.7 bits (45), Expect = 9e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 ||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||| Sbjct: 6587 agatggtaatgcgggatttgggggaaaagatggtgaatgacatgtgtcccgatgtcgtgg 6528 Query: 530 tgtatnttgttgatcaacccgtagtccc 557 || || ||||||||| |||| ||||||| Sbjct: 6527 tggatgttgttgatccacccatagtccc 6500
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 89.7 bits (45), Expect = 9e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 ||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||| Sbjct: 142837 agatggtaatgcgggatttgggggaaaagatggtgaatgacatgtgtcccgatgtcgtgg 142778 Query: 530 tgtatnttgttgatcaacccgtagtccc 557 || || ||||||||| |||| ||||||| Sbjct: 142777 tggatgttgttgatccacccatagtccc 142750
>gb|AY204710.1| Glycine max microsomal omega-3-fatty acid desaturase (FAD3A) mRNA, complete cds; nuclear gene for microsomal product Length = 1242 Score = 87.7 bits (44), Expect = 4e-14 Identities = 94/111 (84%) Strand = Plus / Minus Query: 434 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 493 ||||| |||| ||||||||| | ||||| ||||| || |||||||| || ||||| ||| Sbjct: 1029 ccaagaactgattttgctgcttgtgtcgcttcgacgaggtgataatgaggaatttgaggg 970 Query: 494 aaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatc 544 |||||||| ||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 969 aaaagatggtgaataacatgggtgccaatgtcatggtgaatgttattgatc 919
>ref|NM_111953.2| Arabidopsis thaliana FAD7 (FATTY ACID DESATURASE 7); omega-3 fatty acid desaturase AT3G11170 (FAD7) mRNA, complete cds Length = 1825 Score = 83.8 bits (42), Expect = 6e-13 Identities = 101/121 (83%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1327 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1268 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccga 559 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||||| ||| Sbjct: 1267 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtagtcacga 1208 Query: 560 t 560 | Sbjct: 1207 t 1207
>gb|AY102158.1| Arabidopsis thaliana AT3g11170/F9F8_4 mRNA, complete cds Length = 1341 Score = 83.8 bits (42), Expect = 6e-13 Identities = 101/121 (83%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1169 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1110 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccga 559 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||||| ||| Sbjct: 1109 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtagtcacga 1050 Query: 560 t 560 | Sbjct: 1049 t 1049
>dbj|AK220858.1| Arabidopsis thaliana mRNA for omega-3 fatty acid desaturase, chloroplast precursor, complete cds, clone: RAFL22-40-G11 Length = 815 Score = 83.8 bits (42), Expect = 6e-13 Identities = 101/121 (83%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 458 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 399 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccga 559 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||||| ||| Sbjct: 398 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtagtcacga 339 Query: 560 t 560 | Sbjct: 338 t 338
>gb|AF389295.1|AF389295 Arabidopsis thaliana AT3g11170/F9F8_4 mRNA, complete cds Length = 1825 Score = 83.8 bits (42), Expect = 6e-13 Identities = 101/121 (83%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1327 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1268 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccga 559 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||||| ||| Sbjct: 1267 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtagtcacga 1208 Query: 560 t 560 | Sbjct: 1207 t 1207
>gb|AY204712.1| Glycine max microsomal omega-3-fatty acid desaturase (FAD3C) mRNA, complete cds; nuclear gene for microsomal product Length = 1216 Score = 83.8 bits (42), Expect = 6e-13 Identities = 98/117 (83%) Strand = Plus / Minus Query: 428 tacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatt 487 ||||| || ||||||| |||||||| | |||||| |||| | ||||||||| || ||| Sbjct: 1012 tactttcctagcactgcctttgctgctttagtcgcttcgattaaatgataatgtggaatt 953 Query: 488 tgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatc 544 || |||||||| ||||| || ||||| ||||||||||||||||| || ||||||||| Sbjct: 952 tgagggaaaaggtgatggataacatgggtgccaatgtcatggtgaatgttgttgatc 896
>emb|BX824950.1|CNS0A5PZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1528 Score = 83.8 bits (42), Expect = 6e-13 Identities = 101/121 (83%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1212 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1153 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccga 559 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||||| ||| Sbjct: 1152 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtagtcacga 1093 Query: 560 t 560 | Sbjct: 1092 t 1092
>emb|BX824183.1|CNS0A5LO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1513 Score = 83.8 bits (42), Expect = 6e-13 Identities = 101/121 (83%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1204 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1145 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccga 559 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||||| ||| Sbjct: 1144 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtagtcacga 1085 Query: 560 t 560 | Sbjct: 1084 t 1084
>emb|BX823863.1|CNS0A5G7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1513 Score = 83.8 bits (42), Expect = 6e-13 Identities = 101/121 (83%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1202 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1143 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccga 559 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||||| ||| Sbjct: 1142 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtagtcacga 1083 Query: 560 t 560 | Sbjct: 1082 t 1082
>emb|BX823702.1|CNS0A4NN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1554 Score = 83.8 bits (42), Expect = 6e-13 Identities = 101/121 (83%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1231 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1172 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccga 559 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||||| ||| Sbjct: 1171 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtagtcacga 1112 Query: 560 t 560 | Sbjct: 1111 t 1111
>dbj|AB051215.2| Glycine max mRNA for microsomal omega-3 fatty acid desaturase, complete cds Length = 1407 Score = 83.8 bits (42), Expect = 6e-13 Identities = 98/117 (83%) Strand = Plus / Minus Query: 428 tacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatt 487 ||||| || ||||||| |||||||| | |||||| |||| | ||||||||| || ||| Sbjct: 1023 tactttcctagcactgcctttgctgctttagtcgcttcgattaaatgataatgtggaatt 964 Query: 488 tgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatc 544 || |||||||| ||||| || ||||| ||||||||||||||||| || ||||||||| Sbjct: 963 tgagggaaaaggtgatggataacatgggtgccaatgtcatggtgaatgttgttgatc 907
>dbj|D26019.1|ATHFADIP Arabidopsis thaliana mRNA for plastid fatty acid desaturase, complete cds Length = 1662 Score = 83.8 bits (42), Expect = 6e-13 Identities = 101/121 (83%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1300 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1241 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccga 559 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||||| ||| Sbjct: 1240 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtagtcacga 1181 Query: 560 t 560 | Sbjct: 1180 t 1180
>gb|L22961.1|ATHCPFADD Arabidopsis thaliana chloroplast omega-3 fatty acid desaturase (Fadd) gene, complete cds Length = 1525 Score = 83.8 bits (42), Expect = 6e-13 Identities = 101/121 (83%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1178 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1119 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtcccga 559 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||||| ||| Sbjct: 1118 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtagtcacga 1059 Query: 560 t 560 | Sbjct: 1058 t 1058
>gb|AY592974.1| Brassica napus chloroplast omega-3 fatty acid desaturase mRNA, complete cds; nuclear gene for chloroplast product Length = 1333 Score = 81.8 bits (41), Expect = 2e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1149 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgagggaaaaga 1090 Query: 500 tgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtc 555 ||||| || |||||||| |||| ||| || || || ||||||||||| |||||||| Sbjct: 1089 tgatgtatcacatgagttccaacgtcgtgatggatgttgttgatcaatccgtagtc 1034
>gb|BT014282.1| Lycopersicon esculentum clone 133516F, mRNA sequence Length = 1525 Score = 79.8 bits (40), Expect = 9e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 440 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 499 ||||| |||||||| | ||||| |||||||| |||||||| || ||||| ||||||||| Sbjct: 1158 actggctttgctgcttttgtcgcttcgacaaggtgataatgtggtatttgagggaaaaga 1099 Query: 500 tgatgaatgacatgagtgccaatgtcatggtg 531 || ||||| |||||||| ||||| |||||||| Sbjct: 1098 tggtgaataacatgagtaccaatatcatggtg 1067
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 79.8 bits (40), Expect = 9e-12 Identities = 78/91 (85%) Strand = Plus / Plus Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 ||||||||||| ||||| || |||||||||||||| || |||||||| ||||| ||||| Sbjct: 14271 agatgataatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcatga 14330 Query: 530 tgtatnttgttgatcaacccgtagtcccgat 560 || || || |||||||| |||||||| |||| Sbjct: 14331 tggatgttattgatcaatccgtagtcacgat 14361
>gb|AY204711.1| Glycine max microsomal omega-3-fatty acid desaturase (FAD3B) mRNA, complete cds; nuclear gene for microsomal product Length = 1180 Score = 79.8 bits (40), Expect = 9e-12 Identities = 93/111 (83%) Strand = Plus / Minus Query: 434 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 493 ||||| |||||||||||||| | ||||| || || || |||||||| || ||||| ||| Sbjct: 989 ccaagaactggttttgctgcttgtgtcgcttcaacgaggtgataatgaggaatttggggg 930 Query: 494 aaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatc 544 |||||||| || || ||||| ||||||||||||||||| || || |||||| Sbjct: 929 aaaagatggtggataacatgggtgccaatgtcatggtgaatgttattgatc 879
>dbj|AB105887.1| Glycine max Fan mRNA for microsomal omega-3 fatty acid desaturase, complete cds Length = 1131 Score = 79.8 bits (40), Expect = 9e-12 Identities = 93/111 (83%) Strand = Plus / Minus Query: 434 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 493 ||||| |||| ||||||||| | ||||| || || || |||||||| || ||||| ||| Sbjct: 974 ccaagaactgattttgctgcttgtgtcgcttcaacgaggtgataatgaggaatttgaggg 915 Query: 494 aaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatc 544 |||||||| ||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 914 aaaagatggtgaataacatgggtgccaatgtcatggtgaatgttattgatc 864
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 79.8 bits (40), Expect = 9e-12 Identities = 78/91 (85%) Strand = Plus / Minus Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 ||||||||||| ||||| || |||||||||||||| || |||||||| ||||| ||||| Sbjct: 39009 agatgataatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcatga 38950 Query: 530 tgtatnttgttgatcaacccgtagtcccgat 560 || || || |||||||| |||||||| |||| Sbjct: 38949 tggatgttattgatcaatccgtagtcacgat 38919
>dbj|D14007.1|ATHFAD7 Arabidopsis thaliana fad7 gene for omega-3-desaturase, complete cds Length = 2569 Score = 79.8 bits (40), Expect = 9e-12 Identities = 78/91 (85%) Strand = Plus / Minus Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 ||||||||||| ||||| || |||||||||||||| || |||||||| ||||| ||||| Sbjct: 2120 agatgataatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcatga 2061 Query: 530 tgtatnttgttgatcaacccgtagtcccgat 560 || || || |||||||| |||||||| |||| Sbjct: 2060 tggatgttattgatcaatccgtagtcacgat 2030
>emb|AJ250316.1|BJU250316 Brassica juncea fad7 gene for chloroplast omega-3 fatty acid desaturase, exons 1-8 Length = 3866 Score = 79.8 bits (40), Expect = 9e-12 Identities = 78/91 (85%) Strand = Plus / Minus Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 ||||||||||| ||||| ||||||||||||||||| || |||||||| |||||||| || Sbjct: 3310 agatgataatgtgggatctgtgggaaaagatgatgtatcacatgagttccaatgtcgtga 3251 Query: 530 tgtatnttgttgatcaacccgtagtcccgat 560 || || || ||||||| |||||||| |||| Sbjct: 3250 tggatgttattgatcactccgtagtcacgat 3220
>emb|BX832153.1|CNS09YN7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 431 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 416 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 475 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 113 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 54 Query: 476 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaat 522 ||||| ||||| || |||||||||||||| || |||||||| ||||| Sbjct: 53 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaat 7
>emb|AJ250664.1|HVU250664 Hordeum vulgare partial mRNA for omega-3 fatty acid desaturase (bci-8 gene) Length = 495 Score = 77.8 bits (39), Expect = 3e-11 Identities = 89/106 (83%) Strand = Plus / Minus Query: 452 gcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgaca 511 ||||| |||||||| || ||||| |||||||||||||| ||||||||||| | || || Sbjct: 490 gcctcggtcgcctccactagatggtaatgcgggatttgcgggaaaagatggcggatcacg 431 Query: 512 tgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtccc 557 ||||| || ||||| ||||| || ||||||| | |||||||||||| Sbjct: 430 tgagtcccgatgtcgtggtggatgttgttgagccacccgtagtccc 385
>dbj|AB105886.1| Glycine max Fanx mRNA for microsomal omega-3 fatty acid desaturase, complete cds Length = 1143 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 434 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 493 ||||| |||||||||||||| | ||||| || || || |||||||| || ||||| ||| Sbjct: 986 ccaagaactggttttgctgcttgtgtcgcttcaacgaggtgataatgaggaatttggggg 927 Query: 494 aaaagatgatgaatgacatgagtgccaatgtcatggtg 531 |||||||| || || ||||| ||||||||||||||||| Sbjct: 926 aaaagatggtggataacatgggtgccaatgtcatggtg 889
>gb|L22964.1|SOYCPGAD3A Glycine soja chloroplast 3-omega faty acid desaturase (Fad3) mRNA, complete cds Length = 2181 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 434 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 493 ||||| |||||||||||||| | ||||| || || || |||||||| || ||||| ||| Sbjct: 1840 ccaagaactggttttgctgcttgtgtcgcttcaacgaggtgataatgaggaatttggggg 1781 Query: 494 aaaagatgatgaatgacatgagtgccaatgtcatggtg 531 |||||||| || || ||||| ||||||||||||||||| Sbjct: 1780 aaaagatggtggataacatgggtgccaatgtcatggtg 1743
>gb|AY135564.1| Betula pendula clone fad8 omega-3 fatty acid desaturase mRNA, complete cds; nuclear gene for plastid product Length = 1889 Score = 73.8 bits (37), Expect = 5e-10 Identities = 66/76 (86%) Strand = Plus / Minus Query: 485 atttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatc 544 ||||| || ||||||||||| |||||||| || ||||| |||||||| || ||||| ||| Sbjct: 1461 atttgaggaaaaagatgatgtatgacatgcgttccaatatcatggtgaatattgttaatc 1402 Query: 545 aacccgtagtcccgat 560 || ||||||||||||| Sbjct: 1401 aatccgtagtcccgat 1386
>gb|AF517831.2| Prunus persica chloroplast omega-3 desaturase mRNA, complete cds; nuclear gene for chloroplast product Length = 1350 Score = 71.9 bits (36), Expect = 2e-09 Identities = 122/151 (80%) Strand = Plus / Minus Query: 410 ttctctggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgaca 469 |||| ||| ||| |||||||||| |||||||| || || |||||||| || || || || Sbjct: 1214 ttctttggctctctgtagtacttcccaagcacaggcttagctgcctccgttgcttctact 1155 Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 | | ||| || || ||||| ||||| || ||||| |||||||| || ||||||||||| Sbjct: 1154 aagttatagtgtggaatttgagggaacaggtgatgtatgacatgggttccaatgtcatga 1095 Query: 530 tgtatnttgttgatcaacccgtagtcccgat 560 || || ||||||||||| |||||||| |||| Sbjct: 1094 tggatgttgttgatcaatccgtagtctcgat 1064
>dbj|AB005241.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOP10 Length = 57892 Score = 71.9 bits (36), Expect = 2e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 ||||||||||| ||||| || |||||||||||||| || |||||||| ||||| || ||| Sbjct: 44663 agatgataatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtgg 44604 Query: 530 tgtatnttgttgatcaacccgtagtcccgat 560 || || || |||||| | |||||||| |||| Sbjct: 44603 tggatgttattgatccatccgtagtcacgat 44573
>gb|U08216.1|ATU08216 Arabidopsis thaliana chloroplast linoleate desaturase (fad8) gene, nuclear gene encoding chloroplast protein, complete cds Length = 2541 Score = 71.9 bits (36), Expect = 2e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 470 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 529 ||||||||||| ||||| || |||||||||||||| || |||||||| ||||| || ||| Sbjct: 2082 agatgataatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtgg 2023 Query: 530 tgtatnttgttgatcaacccgtagtcccgat 560 || || || |||||| | |||||||| |||| Sbjct: 2022 tggatgttattgatccatccgtagtcacgat 1992
>gb|L22965.1|SOYCPFADD Glycine soja chloroplast omega-3 fatty acid desaturase (Fadd) mRNA, complete cds Length = 1675 Score = 71.9 bits (36), Expect = 2e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 434 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 493 |||| |||||| || || |||||||| ||||| || | ||||| || || ||||| || Sbjct: 1367 ccaaacactggcttagcagcctcagtagcctcaactaagtgatagtgtggaatttgagga 1308 Query: 494 aaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatc 544 || || |||||||||||||||||||||||||||||||| || || |||||| Sbjct: 1307 aataggtgatgaatgacatgagtgccaatgtcatggtgaatgttattgatc 1257
>dbj|D63954.1| Zea mays FAD7 gene for fatty acid desaturase, complete cds Length = 4970 Score = 71.9 bits (36), Expect = 2e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 460 cgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgcc 519 |||||||| ||||| ||||||||||| || ||||| || ||||| ||||||||||| || Sbjct: 4396 cgcctcgatgagatggtaatgcgggatctgagggaagaggtgatggatgacatgagttcc 4337 Query: 520 aatgtcatggtgtatnttgttgatcaacccgtagtcccg 558 ||||| || || || ||||||||| | ||||||||||| Sbjct: 4336 gatgtcgtgatggatgttgttgatccatccgtagtcccg 4298 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 419 tctttgtagtacttgccaagcactggttttgctgcctc 456 |||||||||||||||||||| || || ||||||||||| Sbjct: 4532 tctttgtagtacttgccaagaaccggctttgctgcctc 4495
>dbj|D14410.1|VIRARG1 Vigna radiata auxin-regulated mRNA Length = 1323 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 428 tacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatt 487 ||||| |||||||||| |||||||| | |||||| || || | ||| ||||| || ||| Sbjct: 991 tactttccaagcactgattttgctgatttagtcgcttccaccaaatggtaatgtggaatt 932 Query: 488 tgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 531 || |||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 931 tgagggaaaaggtgatggataacatgggtgccaatgtcatggtg 888
>gb|AF020204.1| Pelargonium x hortorum omega-3 desaturase (pxh-15) mRNA, partial cds Length = 1350 Score = 69.9 bits (35), Expect = 9e-09 Identities = 64/74 (86%) Strand = Plus / Minus Query: 482 gggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttg 541 |||||||| ||||| ||||| ||||| || |||||||||||||||||||| || |||||| Sbjct: 1012 gggatttgagggaagagatggtgaataacgtgagtgccaatgtcatggtgaatgttgttg 953 Query: 542 atcaacccgtagtc 555 | ||| || ||||| Sbjct: 952 aacaatccatagtc 939
>gb|AY551558.1| Malus x domestica chloroplast omega-3 desaturase mRNA, complete cds; nuclear gene for chloroplast product Length = 1320 Score = 67.9 bits (34), Expect = 3e-08 Identities = 72/85 (84%) Strand = Plus / Minus Query: 476 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatn 535 ||||| |||||||| ||||| |||||||| ||||||||||| || || ||||| || || Sbjct: 1118 taatgtgggatttgagggaagagatgatgtatgacatgagttccgatatcatgatggatg 1059 Query: 536 ttgttgatcaacccgtagtcccgat 560 ||||||||| | |||||||| |||| Sbjct: 1058 ttgttgatccatccgtagtcgcgat 1034
>dbj|AB188198.2| Glycine max GmFAD3-2b mRNA for microsomal omega-3 fatty acid desaturase, complete cds Length = 1320 Score = 67.9 bits (34), Expect = 3e-08 Identities = 63/73 (86%) Strand = Plus / Minus Query: 472 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 531 ||||||||| || || || |||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 973 atgataatgtggaatctgagggaaaaggtgatggataacatgggtgccaatgtcatggtg 914 Query: 532 tatnttgttgatc 544 || ||||||||| Sbjct: 913 aatgttgttgatc 901
>gb|DQ316783.1| Glycine max cultivar A29 soybean line omega-3 fatty acid desaturase (FAD3C) gene, partial sequence Length = 114 Score = 67.9 bits (34), Expect = 3e-08 Identities = 63/73 (86%) Strand = Plus / Minus Query: 472 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 531 ||||||||| || ||||| |||||||| | ||| || ||||| ||||||||||||||||| Sbjct: 76 atgataatgtggaatttgagggaaaaggtaatggataacatgggtgccaatgtcatggtg 17 Query: 532 tatnttgttgatc 544 || ||||||||| Sbjct: 16 aatgttgttgatc 4
>emb|AJ011004.1|AFO011004 Aleurites fordii mRNA homologous to Omega-3 desaturases, complete CDS Length = 1358 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 472 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 531 ||||||||| |||||||| || ||||||||||| || ||||| |||||||| |||||||| Sbjct: 998 atgataatgtgggatttgaggaaaaagatgatggataacatgtgtgccaatatcatggtg 939
>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE Length = 125647 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatg 528 |||||||| || ||||| ||||| |||||||||| |||||||||||||||||||| Sbjct: 93652 tgataatgaggaatttgagggaagagatgatgaacaacatgagtgccaatgtcatg 93597
>gb|AF047172.1|AF047172 Vernicia fordii omega-3 fatty acid desaturase (Fad3) mRNA, complete cds Length = 1358 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 472 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 531 ||||||||| |||||||| || ||||||||||| || ||||| |||||||| |||||||| Sbjct: 998 atgataatgtgggatttgaggaaaaagatgatggataacatgtgtgccaatatcatggtg 939
>gb|AY599884.1| Brassica napus omega-3 fatty acid desaturase (fad3) mRNA, complete cds Length = 1178 Score = 61.9 bits (31), Expect = 2e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 532 ||||| || ||||||||||||||||||||||| || || ||||| |||||||| || || Sbjct: 950 tgatagtgagggatttgtgggaaaagatgatggatcacgtgagttccaatgtcgtgatgg 891 Query: 533 atnttgttga 542 || ||||||| Sbjct: 890 atgttgttga 881
>gb|AY248741.2| Lycopersicon esculentum omega-3 fatty acid desaturase mRNA, complete cds; nuclear gene for chloroplast product Length = 1308 Score = 61.9 bits (31), Expect = 2e-06 Identities = 84/102 (82%) Strand = Plus / Minus Query: 439 cactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaag 498 ||||||||| || || ||||| || || || | |||||| || |||||||| ||||| || Sbjct: 1149 cactggtttagcagcttcagttgcttctaccaaatgatagtgtgggatttgagggaagag 1090 Query: 499 atgatgaatgacatgagtgccaatgtcatggtgtatnttgtt 540 |||||| || |||||||| || ||||||||||| || ||||| Sbjct: 1089 atgatgtatcacatgagtccctatgtcatggtggatgttgtt 1048
>gb|AY157317.3| Lycopersicon esculentum strain L402 omega-3 fatty acid desaturase (FAD) mRNA, complete cds Length = 1683 Score = 61.9 bits (31), Expect = 2e-06 Identities = 84/102 (82%) Strand = Plus / Minus Query: 439 cactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaag 498 ||||||||| || || ||||| || || || | |||||| || |||||||| ||||| || Sbjct: 1304 cactggtttagcagcttcagttgcttctaccaaatgatagtgtgggatttgagggaagag 1245 Query: 499 atgatgaatgacatgagtgccaatgtcatggtgtatnttgtt 540 |||||| || |||||||| || ||||||||||| || ||||| Sbjct: 1244 atgatgtatcacatgagtccctatgtcatggtggatgttgtt 1203
>gb|L01418.1|BNALINDES Brassica napa linoleate desaturase (fad3) mRNA, complete cds Length = 1353 Score = 61.9 bits (31), Expect = 2e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 532 ||||| || ||||||||||||||||||||||| || || ||||| |||||||| || || Sbjct: 1027 tgatagtgagggatttgtgggaaaagatgatggatcacgtgagttccaatgtcgtgatgg 968 Query: 533 atnttgttga 542 || ||||||| Sbjct: 967 atgttgttga 958
>gb|AY248742.1| Lycopersicon esculentum omega-3 fatty acid desaturase gene, complete cds; nuclear gene for chloroplast product Length = 43170 Score = 60.0 bits (30), Expect = 8e-06 Identities = 59/69 (85%) Strand = Plus / Minus Query: 472 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 531 |||||| || |||||||| ||||| |||||||| || |||||||| || ||||||||||| Sbjct: 10616 atgatagtgtgggatttgagggaagagatgatgtatcacatgagtccctatgtcatggtg 10557 Query: 532 tatnttgtt 540 || ||||| Sbjct: 10556 gatgttgtt 10548
>emb|AJ007739.1|STU007739 Solanum tuberosum mRNA for w-3 desaturase Length = 1546 Score = 60.0 bits (30), Expect = 8e-06 Identities = 59/69 (85%) Strand = Plus / Minus Query: 472 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 531 |||||| || |||||||| ||||| |||||||| || |||||||| || ||||||||||| Sbjct: 1104 atgatagtgtgggatttgagggaagagatgatgtatcacatgagtccctatgtcatggtg 1045 Query: 532 tatnttgtt 540 || ||||| Sbjct: 1044 gatgttgtt 1036
>dbj|D84678.1| Triticum aestivum mRNA for omega-3 fatty acid desaturase, complete cds Length = 1590 Score = 58.0 bits (29), Expect = 3e-05 Identities = 64/76 (84%) Strand = Plus / Minus Query: 485 atttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttgatc 544 ||||| ||||| || || || |||||||| ||||||||||||||||| || || |||||| Sbjct: 1057 atttgggggaagaggtggtggatgacatgggtgccaatgtcatggtggatgttattgatc 998 Query: 545 aacccgtagtcccgat 560 | || |||||||||| Sbjct: 997 catccatagtcccgat 982
>gb|L25897.1|RCCFAD7A Ricinus communis linoleoyl desaturase (fad7) mRNA, complete cds Length = 1958 Score = 56.0 bits (28), Expect = 1e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 482 gggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgttg 541 |||||||| ||||| ||||||||||| || || || || ||||||||||| || || ||| Sbjct: 1513 gggatttgagggaagagatgatgaataacgtgggttcctatgtcatggtggatgttattg 1454 Query: 542 atcaacccgtagtcccgat 560 ||| | |||||||| |||| Sbjct: 1453 atccatccgtagtcgcgat 1435
>gb|AF222989.1|AF222989 Capsicum annuum omega-3 fatty acid desaturase (FAD) mRNA, complete cds; nuclear gene for chloroplast product Length = 1562 Score = 54.0 bits (27), Expect = 5e-04 Identities = 83/102 (81%) Strand = Plus / Minus Query: 439 cactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaag 498 ||||||||| || || ||||| || || || | |||||| || |||||||| ||||| || Sbjct: 1185 cactggtttagcagcttcagttgcttctaccaaatgatagtgtgggatttgagggaagag 1126 Query: 499 atgatgaatgacatgagtgccaatgtcatggtgtatnttgtt 540 |||||| || ||||| || || ||||||||||| || ||||| Sbjct: 1125 atgatgtatcacatgtgtccctatgtcatggtggatgttgtt 1084
>gb|L22962.1|BNAFAD3A Brasicca napus omega-3 fatty acid desaturase (Fad3) mRNA, complete cds Length = 1336 Score = 54.0 bits (27), Expect = 5e-04 Identities = 59/70 (84%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 532 ||||| || ||||||||||||||||||||||| || || ||||| ||||| || || || Sbjct: 1001 tgatagtgagggatttgtgggaaaagatgatggatcacgtgagttccaatatcgtgatga 942 Query: 533 atnttgttga 542 || ||||||| Sbjct: 941 atgttgttga 932
>gb|AF308978.1|AF308975S4 Brassica rapa subsp. oleifera omega-3 fatty acid desaturase (Fad3) gene, exons 4 through 8, and partial cds Length = 905 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaat 522 ||||| || ||||||||||||||||||||||| || || ||||| ||||| Sbjct: 746 tgatagtgagggatttgtgggaaaagatgatggatcacgtgagttccaat 697
>ref|NM_179808.2| Arabidopsis thaliana FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase AT2G29980 (FAD3) transcript variant AT2G29980.2 mRNA, complete cds Length = 1526 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 525 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 1119 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 1067
>ref|NM_128552.2| Arabidopsis thaliana FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase AT2G29980 (FAD3) transcript variant AT2G29980.1 mRNA, complete cds Length = 1463 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 525 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 1056 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 1004
>gb|AY135565.1| Betula pendula clone fad7 omega-3 fatty acid desaturase mRNA, complete cds; nuclear gene for plastid product Length = 1703 Score = 50.1 bits (25), Expect = 0.008 Identities = 57/68 (83%) Strand = Plus / Minus Query: 476 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatn 535 |||||||||||||| ||||| || ||||| || ||||| || ||||| || ||||| || Sbjct: 1214 taatgcgggatttgagggaataggtgatgtatcacatgggtcccaatatcgtggtggatg 1155 Query: 536 ttgttgat 543 |||||||| Sbjct: 1154 ttgttgat 1147
>gb|AY096462.1| Arabidopsis thaliana putative omega-3 fatty acid desaturase (At2g29980) mRNA, complete cds Length = 1192 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 525 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 950 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 898
>gb|AY063966.1| Arabidopsis thaliana putative omega-3 fatty acid desaturase (At2g29980) mRNA, complete cds Length = 1443 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 525 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 1056 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 1004
>gb|AC004680.3| Arabidopsis thaliana chromosome 2 clone F23F1 map m283, complete sequence Length = 88543 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 525 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 59092 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 59040
>emb|BX821617.1|CNS0A97U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL59ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 453 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 525 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 97 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 45
>emb|BX819659.1|CNS0A84L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS12ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1365 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 525 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 1001 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 949
>gb|AY254858.1| Helianthus annuus omega-3 fatty acid desaturase (FAD7) mRNA, complete cds; nuclear gene for plastid product Length = 1681 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Minus Query: 437 agcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaa 496 ||||| |||||||| ||||| |||||||| | | |||||| || ||||| || || || Sbjct: 1294 agcacaggttttgcagcctccgtcgcctcaattaaatgatagtgtgggatctggggaaag 1235 Query: 497 agatgatgaatgacatgagtgccaatgtc 525 ||||| ||||||||||| || |||||||| Sbjct: 1234 agatggtgaatgacatgtgttccaatgtc 1206
>dbj|D17579.1|ATHFADIER2 Arabidopsis thaliana mRNA for fatty acid desaturase in endoplasmic reticulum, complete cds Length = 1409 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 525 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 1032 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 980
>dbj|D26508.1|ATHFAD3 Arabidopsis thaliana fad3 gene for microsomal omega-3 fatty acid desaturase, complete cds Length = 4250 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 525 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 3826 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 3774
>gb|L22931.1|ATHFADO Arabidopsis thaliana chloroplast omega-r fatty acid desaturase gene, complete cds Length = 1350 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 525 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 995 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 943
>gb|AY642536.1| Brassica napus omega-3 fatty acid desaturase mRNA, complete cds Length = 1154 Score = 46.1 bits (23), Expect = 0.12 Identities = 58/70 (82%) Strand = Plus / Minus Query: 473 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 532 ||||| || ||| ||||||||||||||||||| || || ||||| ||||| || || || Sbjct: 939 tgatagtgaggggtttgtgggaaaagatgatggatcacgtgagttccaatatcgtgatga 880 Query: 533 atnttgttga 542 || ||||||| Sbjct: 879 atgttgttga 870
>dbj|D79979.1| Nicotiana tabacum mRNA for omega-3 fatty acid desaturase, complete cds Length = 1606 Score = 44.1 bits (22), Expect = 0.49 Identities = 60/73 (82%) Strand = Plus / Minus Query: 472 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 531 |||||| || || ||||| ||||| | |||||| || ||||| || || ||||||||||| Sbjct: 1161 atgatagtgtggaatttgagggaataaatgatgtatcacatgtgttcctatgtcatggtg 1102 Query: 532 tatnttgttgatc 544 || ||||||||| Sbjct: 1101 gatgttgttgatc 1089
>dbj|AB049577.1| Nicotiana tabacum NtFAD7 gene for plastid omega-3 fatty acid desaturase, complete cds Length = 2426 Score = 44.1 bits (22), Expect = 0.49 Identities = 60/73 (82%) Strand = Plus / Minus Query: 472 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 531 |||||| || || ||||| ||||| | |||||| || ||||| || || ||||||||||| Sbjct: 2038 atgatagtgtggaatttgagggaataaatgatgtatcacatgtgttcctatgtcatggtg 1979 Query: 532 tatnttgttgatc 544 || ||||||||| Sbjct: 1978 gatgttgttgatc 1966
>gb|AC107781.9| Mus musculus, clone RP23-56O1, complete sequence Length = 174437 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 490 tgggaaaagatgatgaatgac 510 ||||||||||||||||||||| Sbjct: 42752 tgggaaaagatgatgaatgac 42732
>emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chromosome X Contains part of the PCDH11X gene for protocadherin 11 X-linked, complete sequence Length = 170805 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 tttacttaagccacaacctcctgag 233 |||||| |||||||||||||||||| Sbjct: 107195 tttactgaagccacaacctcctgag 107219
>gb|AC012067.2|AC012067 Homo sapiens BAC clone RP11-192N14 from Y, complete sequence Length = 164507 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 tttacttaagccacaacctcctgag 233 |||||| |||||||||||||||||| Sbjct: 53240 tttactgaagccacaacctcctgag 53264
>gb|AC004072.1|AC004072 Human Chromosome X clone bWXD342, complete sequence Length = 170658 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 tttacttaagccacaacctcctgag 233 |||||| |||||||||||||||||| Sbjct: 100799 tttactgaagccacaacctcctgag 100775
>gb|U59477.1|PFU59477 Perilla frutescens omega-3 fatty acid desaturase mRNA, complete cds Length = 1797 Score = 42.1 bits (21), Expect = 1.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 485 atttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatnttgtt 540 ||||||||||| || ||||| || ||||| || || ||||||||||| || ||||| Sbjct: 1345 atttgtgggaagaggtgatgtataacatgcgtccctatgtcatggtggatgttgtt 1290 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 314 tggtagtaaactatgtctccggtgtcgctaacatagtgatcctt 357 ||||||||||| || || || ||||| || |||||||||||||| Sbjct: 1516 tggtagtaaacgatatcgcccgtgtcactcacatagtgatcctt 1473
>gb|AC102535.17| Mus musculus chromosome 7, clone RP23-61O11, complete sequence Length = 220003 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tgcttcatgatgtacattca 159 |||||||||||||||||||| Sbjct: 59113 tgcttcatgatgtacattca 59094
>gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome 1, complete sequence Length = 179626 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tttacttaagccacaacctc 228 |||||||||||||||||||| Sbjct: 153341 tttacttaagccacaacctc 153360
>gb|AC121931.2| Mus musculus BAC clone RP24-205H14 from 2, complete sequence Length = 188664 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cttttacaatggtaataatt 121 |||||||||||||||||||| Sbjct: 3536 cttttacaatggtaataatt 3517
>gb|AC150977.12| Medicago truncatula clone mth2-32m9, complete sequence Length = 125772 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 attgctcttttacaatggta 115 |||||||||||||||||||| Sbjct: 72031 attgctcttttacaatggta 72050
>gb|AC165173.2| Zea mays clone ZMMBBb-125O19, complete sequence Length = 157660 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cgccaatccgagatcccagg 185 |||||||||||||||||||| Sbjct: 6228 cgccaatccgagatcccagg 6209
>emb|AL359987.13| Human DNA sequence from clone RP11-596A13 on chromosome 6, complete sequence Length = 189370 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 acttaagccacaacctcctg 231 |||||||||||||||||||| Sbjct: 12904 acttaagccacaacctcctg 12923
>gb|AC096754.2| Homo sapiens BAC clone RP11-498E11 from 4, complete sequence Length = 153004 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 306 actcactttggtagtaaactatgtctcc 333 |||||||||||||||||| |||||||| Sbjct: 310 actcactttggtagtaaagcatgtctcc 283
>gb|AC107058.4| Homo sapiens BAC clone RP11-633G11 from 4, complete sequence Length = 126135 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 306 actcactttggtagtaaactatgtctcc 333 |||||||||||||||||| |||||||| Sbjct: 124445 actcactttggtagtaaagcatgtctcc 124418
>gb|AC011358.7| Homo sapiens chromosome 5 clone CTC-367D15, complete sequence Length = 201251 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cttttacaatggtaataatt 121 |||||||||||||||||||| Sbjct: 132930 cttttacaatggtaataatt 132949
>gb|AC108163.3| Homo sapiens BAC clone RP11-694K14 from 4, complete sequence Length = 95304 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctttacttaagccacaacct 227 |||||||||||||||||||| Sbjct: 44000 ctttacttaagccacaacct 44019
>dbj|AK079277.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530078N02 product:unclassifiable, full insert sequence Length = 2824 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cttttacaatggtaataatt 121 |||||||||||||||||||| Sbjct: 917 cttttacaatggtaataatt 936
>emb|BX511313.20| Mouse DNA sequence from clone RP24-391O14 on chromosome X, complete sequence Length = 178972 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 ttctctggttctttgtagta 429 |||||||||||||||||||| Sbjct: 53806 ttctctggttctttgtagta 53787
>dbj|AK076344.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732447D17 product:unclassifiable, full insert sequence Length = 3490 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cttttacaatggtaataatt 121 |||||||||||||||||||| Sbjct: 897 cttttacaatggtaataatt 916
>gb|AC087896.15|AC087896 Homo sapiens 12q BAC RP11-777K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183562 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 acttaagccacaacctcctg 231 |||||||||||||||||||| Sbjct: 52287 acttaagccacaacctcctg 52268
>gb|AC022440.7| Homo sapiens chromosome 5 clone RP11-20O22, complete sequence Length = 117353 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cttttacaatggtaataatt 121 |||||||||||||||||||| Sbjct: 32138 cttttacaatggtaataatt 32119
>emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in linkage group 6, complete sequence Length = 143341 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tggtaataattcactagtta 130 |||||||||||||||||||| Sbjct: 6603 tggtaataattcactagtta 6622
>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3), anthocyanin biosynthesis regulatory protein Pl1_B73 (Z576C20.4), putative growth-regulating factor 1 (Z576C20.6), and putative aminoalcoholphosphotransferase (Z576C20.14) genes, complete cds; and putative receptor protein kinase (Z576C20.21) gene, partial cds Length = 155173 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cgccaatccgagatcccagg 185 |||||||||||||||||||| Sbjct: 564 cgccaatccgagatcccagg 545
>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5), epsilon-COP (Z438D03.6), putative kinase (Z438D03.7), unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes, complete cds Length = 185988 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cgccaatccgagatcccagg 185 |||||||||||||||||||| Sbjct: 169029 cgccaatccgagatcccagg 169010
>gb|AF061027.1|AF061027 Vernicia fordii omega-3 fatty acid desaturase precursor, mRNA, partial cds Length = 1703 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gtgtcgctaacatagtgatc 354 |||||||||||||||||||| Sbjct: 1258 gtgtcgctaacatagtgatc 1239
>gb|AC116556.14| Mus musculus strain C57BL/6J chromosome 8 clone rp23-184i13, complete sequence Length = 239958 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tttacttaagccacaacctc 228 |||||||||||||||||||| Sbjct: 210946 tttacttaagccacaacctc 210927
>emb|AL928699.9| Mouse DNA sequence from clone RP23-386I18 on chromosome 2, complete sequence Length = 183473 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cttttacaatggtaataatt 121 |||||||||||||||||||| Sbjct: 13059 cttttacaatggtaataatt 13040
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 tatatatgctaatgtttcatctta 273 |||||||||||||||||| ||||| Sbjct: 1031289 tatatatgctaatgtttcctctta 1031266
>gb|AC173346.1| Mus musculus BAC clone RP23-42N8 from chromosome 9, complete sequence Length = 219266 Score = 40.1 bits (20), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 392 aatggganaggagccgacttctc 414 ||||||| ||||||||||||||| Sbjct: 142849 aatgggagaggagccgacttctc 142871
>dbj|D26509.1|TOBNTFAD3 Tobacco leaf mRNA for microsomal omega-3 fatty acid desaturase, complete cds Length = 1366 Score = 40.1 bits (20), Expect = 7.6 Identities = 40/47 (85%) Strand = Plus / Minus Query: 509 acatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtc 555 ||||| || ||||||||||| ||||| ||||| | ||| |||||||| Sbjct: 966 acatgtgttccaatgtcatgatgtatgttgttaaacaatccgtagtc 920
>dbj|AB049576.1| Nicotiana tabacum NtFAD3 gene for microsomal omega-3 fatty acid desaturase, complete cds Length = 2562 Score = 40.1 bits (20), Expect = 7.6 Identities = 40/47 (85%) Strand = Plus / Minus Query: 509 acatgagtgccaatgtcatggtgtatnttgttgatcaacccgtagtc 555 ||||| || ||||||||||| ||||| ||||| | ||| |||||||| Sbjct: 2060 acatgtgttccaatgtcatgatgtatgttgttaaacaatccgtagtc 2014 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,746,004 Number of Sequences: 3902068 Number of extensions: 3746004 Number of successful extensions: 67265 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66894 Number of HSP's gapped (non-prelim): 371 length of query: 560 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 537 effective length of database: 17,143,297,704 effective search space: 9205950867048 effective search space used: 9205950867048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)