>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)|
           (Fragments)
          Length = 368

 Score =  143 bits (361), Expect = 9e-35
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = -3

Query: 399 AIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCF 220
           AIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCF
Sbjct: 303 AIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCF 362

Query: 219 PTTLAS 202
           PTTLAS
Sbjct: 363 PTTLAS 368

>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid|
           phosphatase) (APase6)
          Length = 614

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = -3

Query: 363 YGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 268
           YGF+KLT FN ++L +E ++  DG V DS T+
Sbjct: 569 YGFSKLTIFNETALKWELIRGDDGTVGDSLTL 600

>DSCAM_HUMAN (O60469) Down syndrome cell adhesion molecule precursor (CHD2)|
          Length = 2012

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 351 KLTAFNHSSLLFEYMKSSDGKVYDSF 274
           ++T  NH +L+ ++M  SDG  Y  F
Sbjct: 361 RITGINHENLIMDHMVKSDGGAYQCF 386

>XRCC2_HUMAN (O43543) DNA-repair protein XRCC2 (X-ray repair cross-complementing|
           protein 2)
          Length = 280

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = +3

Query: 63  THLLHDLFTSTYKLCS*P---ILLLNTCPQFYWMD 158
           THLL  L++     CS P   +L+L++   FYW+D
Sbjct: 124 THLLLTLYSLESMFCSHPSLCLLILDSLSAFYWID 158

>GBLP_DROME (O18640) Guanine nucleotide-binding protein beta subunit-like|
           protein (Receptor of activated protein kinase C homolog)
          Length = 318

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -3

Query: 387 WSIFRDHD--YGFTKLTAFNHSSLLFEYMKSSDG 292
           W + RD D  YG+ +   + HS  + + + SSDG
Sbjct: 43  WKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDG 76

>YPEV_LACDL (P45495) Hypothetical transport protein in pepV 3'region (ORF2)|
           (Fragment)
          Length = 175

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +1

Query: 79  IFLLAHINCAADQFYYSTHAHNFIGWMTLHYIDMTAGRY 195
           +F    +    + FY+ +++H F+ ++T  Y+   AGR+
Sbjct: 60  LFFFFLLRALGEMFYFDSNSHTFVSFIT-RYLGEAAGRF 97

>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein|
            homolog)
          Length = 2095

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/83 (22%), Positives = 37/83 (44%)
 Frame = -3

Query: 387  WSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTL 208
            WS   + + G + +   N   L   + +S +G +YDS+         L  +HD+C  +  
Sbjct: 964  WSGNTNQETGKSLVAKDNGEELNKHHCESQNGSLYDSY---------LVSLHDNCTLSQT 1014

Query: 207  AS*LISSGRHVNVMEGHPSNKIV 139
                 S+  H+++ +  P  K+V
Sbjct: 1015 TINEPSTKSHLSIEKSRPEVKLV 1037


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,048,087
Number of Sequences: 219361
Number of extensions: 931147
Number of successful extensions: 2550
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2550
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)