>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10|
            [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13)
          Length = 1065

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 25/94 (26%), Positives = 46/94 (48%)
 Frame = -3

Query: 389  LFTFDSAPVFIPVTALSVXNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWP 210
            L+ F    + IP T + + N+V +  G   A+   +     GP +G+ +   W+V   +P
Sbjct: 957  LYVFKWTSLLIPPTTILLVNLVGIVAGVSYAI--NSGYQSWGPLMGKLLFAFWVVAHLYP 1014

Query: 209  FVRGLVXXGKHGIPWSVKVKAGLIVAAFVHLCTR 108
            F++GL+   ++  P  V V + L+ + F  L  R
Sbjct: 1015 FLKGLLGR-QNRTPTIVIVWSALLASIFSLLWVR 1047

>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC|
            2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1
            protein 1) (Isoxaben resistant protein 1) (Ath-B)
          Length = 1065

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -3

Query: 389  LFTFDSAPVFIPVTALSVXNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWP 210
            L+ F    + IP T L + N+V +  G   A+   +     GP  G+     W+++  +P
Sbjct: 955  LYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAI--NSGYQSWGPLFGKLFFAFWVIVHLYP 1012

Query: 209  FVRGLVXXGKHGIPWSVKVKAGLIVAAFVHLCTR 108
            F++GL+   ++  P  V V + L+ + F  L  R
Sbjct: 1013 FLKGLMGR-QNRTPTIVVVWSVLLASIFSLLWVR 1045

>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC|
            2.4.1.12) (AtCesA-5)
          Length = 1069

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = -3

Query: 389  LFTFDSAPVFIPVTALSVXNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWP 210
            L+ F    + IP T L + N++ + VG   A+  +      GP  G      W++L  +P
Sbjct: 959  LYIFKWTSLLIPPTTLLIINVIGVIVGISDAI--SNGYDSWGPLFGRLFFAFWVILHLYP 1016

Query: 209  FVRGLV 192
            F++GL+
Sbjct: 1017 FLKGLL 1022

>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9|
            [UDP-forming] (EC 2.4.1.12) (AtCesA-9)
          Length = 1088

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -3

Query: 389  LFTFDSAPVFIPVTALSVXNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWP 210
            L+ F    + IP T L + NIV + VG   A+         GP  G      W+++  +P
Sbjct: 977  LYIFKWTSLLIPPTTLLIINIVGVIVGVSDAI--NNGYDSWGPLFGRLFFALWVIVHLYP 1034

Query: 209  FVRGLV 192
            F++GL+
Sbjct: 1035 FLKGLL 1040

>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC|
            2.4.1.12) (AtCesA-2) (Ath-A)
          Length = 1084

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 23/91 (25%), Positives = 45/91 (49%)
 Frame = -3

Query: 389  LFTFDSAPVFIPVTALSVXNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWP 210
            L+ F    + IP T L + NI+ + VG   A+  +      GP  G      W+++  +P
Sbjct: 973  LYIFKWTTLLIPPTTLLIINIIGVIVGVSDAI--SNGYDSWGPLFGRLFFALWVIVHLYP 1030

Query: 209  FVRGLVXXGKHGIPWSVKVKAGLIVAAFVHL 117
            F++G++  GK     ++ V   +++A+ + L
Sbjct: 1031 FLKGML--GKQDKMPTIIVVWSILLASILTL 1059

>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC|
            2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3)
          Length = 1026

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = -3

Query: 389  LFTFDSAPVFIPVTALSVXNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWP 210
            L+ F    + IP T + + NIV +  G   A+         GP  G+     W+++  +P
Sbjct: 916  LYAFKWTTLLIPPTTVLIINIVGVVAGISDAI--NNGYQSWGPLFGKLFFSFWVIVHLYP 973

Query: 209  FVRGLVXXGKHGIPWSVKVKAGLIVAAFVHLCTR 108
            F++GL+   ++  P  V + + L+ + F  L  R
Sbjct: 974  FLKGLMGR-QNRTPTIVVIWSVLLASIFSLLWVR 1006

>TRMB_BIFLO (Q8G3T4) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)|
           (tRNA(m7G46)-methyltransferase)
          Length = 286

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -2

Query: 117 LHKELTGRAGHRNIGSVILVLPLEHVTKTQAGIKA 13
           +H+ + G  G +N+GSV + LPLEHV K  A + A
Sbjct: 209 VHEVMDGLDGWKNLGSVTVSLPLEHVGKGNADMAA 243

>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC|
            2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5)
          Length = 1049

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = -3

Query: 389  LFTFDSAPVFIPVTALSVXNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWP 210
            L+ F    + IP T L + N+V +  G   A+         GP  G+     W+++  +P
Sbjct: 939  LYLFKWTTLLIPPTTLIILNMVGVVAGVSDAI--NNGYGSWGPLFGKLFFAFWVIVHLYP 996

Query: 209  FVRGLV 192
            F++GL+
Sbjct: 997  FLKGLM 1002

>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC|
            2.4.1.12) (AtCesA-1) (Radially swollen protein 1)
            (AtRSW1)
          Length = 1081

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = -3

Query: 389  LFTFDSAPVFIPVTALSVXNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWP 210
            L+ F    + IP T + + N++ +  G   AV   +     GP  G+     W++   +P
Sbjct: 970  LYIFKWTALLIPPTTVLLVNLIGIVAGVSYAV--NSGYQSWGPLFGKLFFALWVIAHLYP 1027

Query: 209  FVRGLVXXGKHGIPWSVKVKAGLIVAAFVHLCTR 108
            F++GL+   ++  P  V V + L+ + F  L  R
Sbjct: 1028 FLKGLLGR-QNRTPTIVIVWSVLLASIFSLLWVR 1060

>UL03_HHV11 (P10187) Protein UL3|
          Length = 235

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 22/65 (33%), Positives = 30/65 (46%)
 Frame = +3

Query: 123 HERSHNQTSLHLDAPRDSMLSXXDKPSHERPEAQHHPATAHELSDARATMNDRRSPDDGA 302
           HE   +  +   D+ R + ++  D+P H  PE +   ATA   S  RA        DDG 
Sbjct: 39  HESGISPDTTPADSIRGAAVASPDQPLHGGPERE---ATAPSFSPTRA--------DDGP 87

Query: 303 PCPDG 317
           PC DG
Sbjct: 88  PCTDG 92

>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC|
            2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2)
            (Protein PROCUSTE1) (Protein Quill) (AraxCelA)
          Length = 1084

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 22/91 (24%), Positives = 44/91 (48%)
 Frame = -3

Query: 389  LFTFDSAPVFIPVTALSVXNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWP 210
            L+ F    + IP   L + N++ + VG   A+  +      GP  G      W+++  +P
Sbjct: 974  LYLFKWTSLLIPPMTLLIINVIGVIVGVSDAI--SNGYDSWGPLFGRLFFALWVIIHLYP 1031

Query: 209  FVRGLVXXGKHGIPWSVKVKAGLIVAAFVHL 117
            F++GL+  GK     ++ V   +++A+ + L
Sbjct: 1032 FLKGLL--GKQDRMPTIIVVWSILLASILTL 1060

>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC|
            2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1)
          Length = 985

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = -3

Query: 365  VFIPVTALSVXNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVRGLV 192
            + IP T+L + N+V +  G   A+         GP  G+     W++L  +PF++GL+
Sbjct: 881  LLIPPTSLLIINLVGVVAGFSDAL--NKGYEAWGPLFGKVFFAFWVILHLYPFLKGLM 936

>VSX1_BOVIN (Q9GMA3) Visual system homeobox 1 (Transcription factor VSX1)|
           (Retinal inner nuclear layer homeobox protein)
           (Homeodomain protein RINX)
          Length = 365

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = +3

Query: 93  PGRLVPCAEVHERSHNQTSLHLDAPRDSMLSXXDKPSHERPEAQHHPA--TAHELSDARA 266
           PGR  P A   +RS + ++   D+P +        P+  + + + H    TAH+L +   
Sbjct: 122 PGRPPPSAARQKRSESVSTSDEDSPSEDRSDRKASPAPSKRKKRRHRTVFTAHQLEELEK 181

Query: 267 TMNDRRSPD 293
             ++   PD
Sbjct: 182 AFSEAHYPD 190

>JHD3D_MOUSE (Q3U2K5) JmjC domain-containing histone demethylation protein 3D|
           (EC 1.14.11.-) (Jumonji domain-containing protein 2D)
          Length = 510

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = -2

Query: 159 QGEGWFDCGCVRAPLHKELTGRAGHRNIGSVILVLPLEHVTKTQAGIKACY 7
           + +G    G  +    KE   R  + NI ++++  PL+ V   QAG+   Y
Sbjct: 36  ESQGAHRAGLAKVIPPKEWRARQSYDNISNILIATPLQQVVSGQAGVFTQY 86

>PIGR_MOUSE (O70570) Polymeric-immunoglobulin receptor precursor (Poly-Ig|
           receptor) (PIGR) [Contains: Secretory component]
          Length = 771

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = -2

Query: 174 NPVERQGEGWFDCGCVRAPLHKELTG---RAGHRNIGSVILVLPLEHVTKTQAGIKA 13
           NPV ++ EGW+ CG  +   + E T        R  GS        HV  T A  +A
Sbjct: 534 NPVSKEDEGWYWCGVKQGQTYGETTAIYIAVEERTRGS-------SHVNPTDANARA 583

>PIGR_RAT (P15083) Polymeric-immunoglobulin receptor precursor (Poly-Ig|
           receptor) (PIGR) [Contains: Secretory component]
          Length = 769

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 174 NPVERQGEGWFDCGCVRAPLHKELT 100
           NPV+++ EGW+ CG     ++ E T
Sbjct: 534 NPVKKEDEGWYWCGVKEGQVYGETT 558

>CBRB_DICD3 (Q47085) Achromobactin transport system permease protein cbrB|
          Length = 340

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 395 PGLFTFDSAPVFIPVTALSVXNIVALAVGAWRAVIGTA 282
           PGLF  ++  +F  +  +S+   VA++V  W A  G A
Sbjct: 98  PGLFGINAGAMFFLIVCVSLFPKVAMSVWLWSAFAGAA 135

>SERI1_BOMMO (P07856) Sericin 1 precursor (Silk gum protein)|
          Length = 1186

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
 Frame = -1

Query: 256 SESSCAVAGWCCASGRS*EGLSXXE---SMESRGASXXXXXXXXXRSCTSAQGTNRPGWP 86
           ++SS   AG   + G S  G S      S+ S G+S            +++ G++  G+ 
Sbjct: 601 TDSSSKSAGSRTSGGSSTYGYSSSHRGGSVSSTGSSSNTDSSTKNAGSSTSGGSSTYGYS 660

Query: 85  SKYWKRNFSSTIGTCNEDSS 26
           S +   + SST  + N DSS
Sbjct: 661 SSHRGGSVSSTGSSSNTDSS 680

>RGA3_SCHPO (O14014) Probable Rho-type GTPase-activating protein 3|
          Length = 969

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
 Frame = +3

Query: 123 HERS-HNQTSLHLDAPRDSMLSXXDKPSHERPEAQHHPATAHELSDARATMNDRRSPDDG 299
           H RS HN TS           S    P    P  Q H  T+ + SD  +       P   
Sbjct: 341 HMRSLHNATSPFRPFSPSYRSSDTHSPRTRSPNVQTHKKTSSQPSDLSSFAQLLSPPQVL 400

Query: 300 APCPDGEGH 326
           +P P+G GH
Sbjct: 401 SPKPNGGGH 409

>PRDM1_MOUSE (Q60636) PR domain zinc finger protein 1 (PR domain-containing|
           protein 1) (Beta-interferon gene positive-regulatory
           domain I-binding factor) (BLIMP-1)
          Length = 856

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = +3

Query: 138 NQTSLHLDAPRDSMLSXXDKPSHERPEAQHHPATAHELSDARATMNDRRSPDDGAP 305
           N  SL    P D        P H +      P +A  L+ A A+M D  SP  G+P
Sbjct: 494 NPASLPSSLPTDGARRLLP-PEHPKEVLIPAPHSAFSLTGAAASMKDESSPPSGSP 548

>GLGB_MYCPA (Q73X75) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 731

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 317 AVGAWRAVIGTAAVVHGGPGIG 252
           + G WR V+ T A V+ G GIG
Sbjct: 676 SAGRWREVLNTDATVYNGSGIG 697

>I17RC_MOUSE (Q8K4C2) Interleukin-17 receptor C precursor (IL-17 receptor C)|
           (IL-17RC) (Interleukin-17 receptor-like protein)
           (IL-17RL)
          Length = 674

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = -2

Query: 267 WPGHRRVRVLWLDGVVLLAVRERACXQXKAWNPVERQGEGWFD--CGCVRAPLHKELTGR 94
           W  H+R R+L   GVV+L     A  Q + W  ++    G  D     +   L   L GR
Sbjct: 522 WFHHQRRRILQEGGVVILLFSPAAVAQCQQWLQLQTVEPGPHDALAAWLSCVLPDFLQGR 581

Query: 93  AGHRNIG 73
           A  R +G
Sbjct: 582 ATGRYVG 588

>NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)|
          Length = 1176

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
 Frame = -1

Query: 118  SAQGTNRPGWPSKYW------KRNFSSTIGTCNEDS 29
            S+  T  P  P+  W      KRNFS T G+C  D+
Sbjct: 1041 SSSCTTNPSGPASPWISCPFHKRNFSLTSGSCKNDN 1076

>MYOD1_HUMAN (P15172) Myoblast determination protein 1 (Myogenic factor 3)|
           (Myf-3)
          Length = 319

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/80 (23%), Positives = 31/80 (38%)
 Frame = +3

Query: 90  QPGRLVPCAEVHERSHNQTSLHLDAPRDSMLSXXDKPSHERPEAQHHPATAHELSDARAT 269
           +PG+    + +   S     +  ++P    L   D PS   P  Q   A     S+  ++
Sbjct: 238 RPGKSAAVSSLDYLSSIVERISTESPAAPALLLADVPSESPPRRQEAAAP----SEGESS 293

Query: 270 MNDRRSPDDGAPCPDGEGHN 329
            +  +SPD    CP G   N
Sbjct: 294 GDPTQSPDAAPQCPAGANPN 313

>GLGB_RHOMR (Q93HU3) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 621

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 311 GAWRAVIGTAAVVHGGPGIGEF 246
           G W  V+ + AV +GG G+G F
Sbjct: 566 GPWHEVLNSDAVAYGGSGMGNF 587

>APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9|
           (Pseudo-response regulator 9)
          Length = 468

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
 Frame = +3

Query: 180 LSXXDKPSHERPEAQHHPATAHELSDARATMNDRRSPDD---GAPCPDGEGHNVXXXXXX 350
           L+  D P+     AQ  PA+ H L D   T  D R   D   GA   +  GHN       
Sbjct: 159 LTLRDDPT---AHAQSLPASQHNLEDTDETCEDSRYHSDQGSGAQAINYNGHNKLMENGK 215

Query: 351 XXDE 362
             DE
Sbjct: 216 SVDE 219

>TBX19_HUMAN (O60806) T-box transcription factor TBX19 (T-box protein 19) (T-box|
           factor, pituitary)
          Length = 448

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 371 APVFIPVTALSVXNIVALAVGAWRAVIGTAAVVHGGPGIG 252
           AP    V  L   ++ ++AV  W AV        GGPG G
Sbjct: 399 APTSAGVEVLGEPSLTSIAVSTWTAVASHPFAGWGGPGAG 438

>VP19_EBV (P03187) Probable capsid assembly and DNA maturation protein|
           (Capsid protein VP19C)
          Length = 364

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
 Frame = -3

Query: 317 AVGAWRAVI---GTAAVVHGGPGIGEFVCCGWMVLCFWPFV 204
           A   WRA +   G  AV  GG G G F   GW    F  F+
Sbjct: 54  AAAVWRAGLLAPGEVAVAGGGSGGGSFSWSGWRPPVFGDFL 94

>CAC1D_CHICK (O73700) Voltage-dependent L-type calcium channel alpha-1D subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.3)
            (CHCACHA1D)
          Length = 2190

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 207  ERPEAQHHPATAHELSDARATMNDRRSP 290
            ERP+  HHP    E  D++   + +RSP
Sbjct: 1908 ERPKGYHHPHGFFEEDDSQTCYDTKRSP 1935

>CCD21_HUMAN (Q6P2H3) Coiled-coil domain-containing protein 21|
          Length = 762

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/63 (28%), Positives = 25/63 (39%)
 Frame = +3

Query: 120 VHERSHNQTSLHLDAPRDSMLSXXDKPSHERPEAQHHPATAHELSDARATMNDRRSPDDG 299
           +H   H +T L L  P        D    +  E Q       ++ D R TM+DR + D G
Sbjct: 708 IHSAQHPETQLDLQKP--------DVIKRKLEEVQQ---LRRDIEDLRTTMSDRYAQDMG 756

Query: 300 APC 308
             C
Sbjct: 757 ENC 759


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,389,747
Number of Sequences: 219361
Number of extensions: 1061757
Number of successful extensions: 3306
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3301
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)