>dbj|AK071090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079C11, full
            insert sequence
          Length = 1902

 Score =  137 bits (69), Expect = 4e-29
 Identities = 177/212 (83%), Gaps = 4/212 (1%)
 Strand = Plus / Minus

                                                                        
Query: 279  atcaatcggacgccttcatcttccgaggcctcttgccctgggttggcgaggggggtgcat 338
            ||||||| || || |||| ||||||||||||||||  ||||| ||| ||||| |||||||
Sbjct: 1437 atcaatcagatgctttcaacttccgaggcctcttggactggggtggtgagggaggtgcat 1378

                                                                        
Query: 339  c---aaatcttncagaggtcttccgcttgtggtcccgtttgactgctctctcaccttcaa 395
            |   ||||||| ||| ||||||||||||||||||||| ||| |||||||||||||| |||
Sbjct: 1377 ctataaatcttccagtggtcttccgcttgtggtcccgcttgcctgctctctcacctgcaa 1318

                                                                        
Query: 396  acccagccatattagggacaaaagggtcgatcaatatccctattagaacgcttangtgtg 455
            ||||| |  ||| ||| || |||||||| ||||| ||| ||||||| ||||||| |||||
Sbjct: 1317 acccaacagtatcaggaac-aaagggtctatcaacatctctattagcacgcttaggtgtg 1259

                                            
Query: 456  gncggcgcctctgtgaatgaactttctctgtt 487
               || |||||||| || ||| ||||||||||
Sbjct: 1258 cttggtgcctctgtaaaggaattttctctgtt 1227

>dbj|AK060731.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A04, full
            insert sequence
          Length = 1882

 Score =  137 bits (69), Expect = 4e-29
 Identities = 177/212 (83%), Gaps = 4/212 (1%)
 Strand = Plus / Minus

                                                                        
Query: 279  atcaatcggacgccttcatcttccgaggcctcttgccctgggttggcgaggggggtgcat 338
            ||||||| || || |||| ||||||||||||||||  ||||| ||| ||||| |||||||
Sbjct: 1436 atcaatcagatgctttcaacttccgaggcctcttggactggggtggtgagggaggtgcat 1377

                                                                        
Query: 339  c---aaatcttncagaggtcttccgcttgtggtcccgtttgactgctctctcaccttcaa 395
            |   ||||||| ||| ||||||||||||||||||||| ||| |||||||||||||| |||
Sbjct: 1376 ctataaatcttccagtggtcttccgcttgtggtcccgcttgcctgctctctcacctgcaa 1317

                                                                        
Query: 396  acccagccatattagggacaaaagggtcgatcaatatccctattagaacgcttangtgtg 455
            ||||| |  ||| ||| || |||||||| ||||| ||| ||||||| ||||||| |||||
Sbjct: 1316 acccaacagtatcaggaac-aaagggtctatcaacatctctattagcacgcttaggtgtg 1258

                                            
Query: 456  gncggcgcctctgtgaatgaactttctctgtt 487
               || |||||||| || ||| ||||||||||
Sbjct: 1257 cttggtgcctctgtaaaggaattttctctgtt 1226

>ref|XM_475806.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1317

 Score =  135 bits (68), Expect = 2e-28
 Identities = 176/211 (83%), Gaps = 4/211 (1%)
 Strand = Plus / Minus

                                                                        
Query: 280  tcaatcggacgccttcatcttccgaggcctcttgccctgggttggcgaggggggtgcatc 339
            |||||| || || |||| ||||||||||||||||  ||||| ||| ||||| ||||||||
Sbjct: 1317 tcaatcagatgctttcaacttccgaggcctcttggactggggtggtgagggaggtgcatc 1258

                                                                        
Query: 340  ---aaatcttncagaggtcttccgcttgtggtcccgtttgactgctctctcaccttcaaa 396
               ||||||| ||| ||||||||||||||||||||| ||| |||||||||||||| ||||
Sbjct: 1257 tataaatcttccagtggtcttccgcttgtggtcccgcttgcctgctctctcacctgcaaa 1198

                                                                        
Query: 397  cccagccatattagggacaaaagggtcgatcaatatccctattagaacgcttangtgtgg 456
            |||| |  ||| ||| || |||||||| ||||| ||| ||||||| ||||||| ||||| 
Sbjct: 1197 cccaacagtatcaggaac-aaagggtctatcaacatctctattagcacgcttaggtgtgc 1139

                                           
Query: 457  ncggcgcctctgtgaatgaactttctctgtt 487
              || |||||||| || ||| ||||||||||
Sbjct: 1138 ttggtgcctctgtaaaggaattttctctgtt 1108

>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11,
             complete sequence
          Length = 115808

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 355   cttccgcttgtggtcccgtttgactgctctctcacct 391
             |||||||||||||||||| ||| ||||||||||||||
Sbjct: 30109 cttccgcttgtggtcccgcttgcctgctctctcacct 30073



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 279   atcaatcggacgccttcatcttccgaggcctcttgccctgggttggcgaggggggtgcat 338
             ||||||| || || |||| ||||||||||||||||  ||||| ||| ||||| |||||||
Sbjct: 30666 atcaatcagatgctttcaacttccgaggcctcttggactggggtggtgagggaggtgcat 30607

              
Query: 339   c 339
             |
Sbjct: 30606 c 30606

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 355      cttccgcttgtggtcccgtttgactgctctctcacct 391
                |||||||||||||||||| ||| ||||||||||||||
Sbjct: 26649112 cttccgcttgtggtcccgcttgcctgctctctcacct 26649076



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                            
Query: 279      atcaatcggacgccttcatcttccgaggcctcttgccctgggttggcgaggggggtgcat 338
                ||||||| || || |||| ||||||||||||||||  ||||| ||| ||||| |||||||
Sbjct: 26649669 atcaatcagatgctttcaacttccgaggcctcttggactggggtggtgagggaggtgcat 26649610

                 
Query: 339      c 339
                |
Sbjct: 26649609 c 26649609

>ref|NM_006122.2| Homo sapiens mannosidase, alpha, class 2A, member 2 (MAN2A2), mRNA
          Length = 6279

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 464  ctctgtgaatgaactttctct 484
            |||||||||||||||||||||
Sbjct: 3509 ctctgtgaatgaactttctct 3489

>gb|AC026887.9| Homo sapiens chromosome 10 clone RP11-544P1, complete sequence
          Length = 187495

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 125    accatcaattccattttacaa 145
              |||||||||||||||||||||
Sbjct: 178825 accatcaattccattttacaa 178845

>emb|BX640522.13| Zebrafish DNA sequence from clone CH211-257O19 in linkage group 15,
              complete sequence
          Length = 154564

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 90     cagagttcatttccacaatca 110
              |||||||||||||||||||||
Sbjct: 105560 cagagttcatttccacaatca 105540

>gb|DQ418471.1| Human papillomavirus isolate FA155 major capsid protein L1 (L1)
           gene, partial cds
          Length = 440

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 241 gtttagctacatcccaatgtt 261
           |||||||||||||||||||||
Sbjct: 375 gtttagctacatcccaatgtt 355

>gb|AF295065.1|AF314199S4 Homo sapiens neuroplastoma apoptosis-related RNA-binding protein
            (CUGBP2) gene, exon 4
          Length = 3243

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 125  accatcaattccattttacaa 145
            |||||||||||||||||||||
Sbjct: 3068 accatcaattccattttacaa 3048

>gb|AF217675.1|AF217675 Human papillomavirus isolate FA30 major capsid protein L1 gene,
           partial cds
          Length = 440

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 241 gtttagctacatcccaatgtt 261
           |||||||||||||||||||||
Sbjct: 375 gtttagctacatcccaatgtt 355

>gb|AC068831.17| Homo sapiens chromosome 15, clone RP11-2O19, complete sequence
          Length = 136975

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 464  ctctgtgaatgaactttctct 484
            |||||||||||||||||||||
Sbjct: 8664 ctctgtgaatgaactttctct 8644

>gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 from chromosome unknown,
             complete sequence
          Length = 161382

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    aattcttgctctgctctgaat 63
             |||||||||||||||||||||
Sbjct: 27242 aattcttgctctgctctgaat 27262

>gb|AF121434.1|AF121434 Human papillomavirus strain FA13 major capsid protein L1 gene,
           partial cds
          Length = 440

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 241 gtttagctacatcccaatgtt 261
           |||||||||||||||||||||
Sbjct: 375 gtttagctacatcccaatgtt 355

>dbj|D55649.1|HUMAMIII Homo sapiens mRNA for alpha mannosidase II isozyme, complete cds
          Length = 4892

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 464  ctctgtgaatgaactttctct 484
            |||||||||||||||||||||
Sbjct: 3526 ctctgtgaatgaactttctct 3506

>gb|AC003004.1|AC003004 Human Chromosome 15 cosmid C36, complete sequence
          Length = 33550

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 464  ctctgtgaatgaactttctct 484
            |||||||||||||||||||||
Sbjct: 1808 ctctgtgaatgaactttctct 1828

>gb|L28821.1|HUMAMII Homo sapiens alpha mannosidase II isozyme mRNA, complete cds
          Length = 4917

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 464  ctctgtgaatgaactttctct 484
            |||||||||||||||||||||
Sbjct: 3551 ctctgtgaatgaactttctct 3531

>emb|AL832306.1|HSM803613 Homo sapiens mRNA; cDNA DKFZp667I2119 (from clone DKFZp667I2119)
          Length = 2466

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 464  ctctgtgaatgaactttctct 484
            |||||||||||||||||||||
Sbjct: 1072 ctctgtgaatgaactttctct 1052

>gb|AC137974.13| Mus musculus chromosome 15, clone RP23-17J3, complete sequence
          Length = 219617

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     tttgcgcaaaacagagttcatttc 102
              |||||||||||||||| |||||||
Sbjct: 192040 tttgcgcaaaacagaggtcatttc 192063

>gb|AC161196.4| Mus musculus chromosome 15, clone RP23-319G15, complete sequence
          Length = 177873

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     tttgcgcaaaacagagttcatttc 102
              |||||||||||||||| |||||||
Sbjct: 124323 tttgcgcaaaacagaggtcatttc 124346

>gb|AC005496.3| Arabidopsis thaliana chromosome 2 clone T27A16 map mi54, complete
             sequence
          Length = 90665

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tcaattccattttacaaaac 148
             ||||||||||||||||||||
Sbjct: 61929 tcaattccattttacaaaac 61910

>gb|AF283503.1|AF283503 Rivulus marmoratus mitochondrion, complete genome
          Length = 17329

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ccatcgcccttcttgccctg 220
             ||||||||||||||||||||
Sbjct: 14522 ccatcgcccttcttgccctg 14541

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     cgcccttcttgccctggccg 224
               ||||||||||||||||||||
Sbjct: 6154010 cgcccttcttgccctggccg 6154029

>gb|DQ326210.1| Uncultured bacterium clone C129 16S ribosomal RNA gene, partial
            sequence
          Length = 1385

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  aaaacaggtggcgcacggct 163
            ||||||||||||||||||||
Sbjct: 1035 aaaacaggtggcgcacggct 1054

>gb|DQ308574.1| Uncultured Megasphaera sp. L4M2 enrichment clone 196.C01 16S
            ribosomal RNA gene, partial sequence
          Length = 1530

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  aaaacaggtggcgcacggct 163
            ||||||||||||||||||||
Sbjct: 1057 aaaacaggtggcgcacggct 1076


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,009,145
Number of Sequences: 3902068
Number of extensions: 4009145
Number of successful extensions: 69635
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69563
Number of HSP's gapped (non-prelim): 69
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)