ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24j13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189499.1| Oryza sativa (japonica cultivar-group), predic... 76 1e-10
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
3dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
4dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
5emb|AJ535062.1|OSA535062 Oryza sativa (japonica cultivar-group) ... 76 1e-10
6gb|AC103896.3| Papio anubis clone RP41-441D23, complete sequence 42 1.7
7gb|AY157024.2| Homo sapiens peroxisome proliferative activated r... 42 1.7
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.7
9gb|AC107024.5| Homo sapiens 3 BAC RP11-447J13 (Roswell Park Canc... 42 1.7
10emb|AL731550.11| Human DNA sequence from clone RP11-94H3 on chro... 42 1.7
11emb|AL606526.10| Human DNA sequence from clone RP13-534F18 on ch... 42 1.7
12emb|AL590669.11| Human DNA sequence from clone RP11-76K24 on chr... 42 1.7
13emb|AL357512.15| Human DNA sequence from clone RP11-541J2 on chr... 42 1.7
14emb|AL121965.19|HSJ161I14 Human DNA sequence from clone RP1-161I... 42 1.7
15emb|AL035686.15|HS965N20 Human DNA sequence from clone RP5-965N2... 42 1.7
16gb|AC108696.2| Homo sapiens 3 BAC RP11-731C8 (Roswell Park Cance... 42 1.7
17gb|AC022068.6| Homo sapiens chromosome 8, clone RP11-523C15, com... 42 1.7
18dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
19gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C... 42 1.7
20gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.7
21dbj|AK120269.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
22dbj|AP001874.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.7
23dbj|AP000560.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 42 1.7
24gb|AC171072.2| Rhesus Macaque CHR7 BAC CH250-508E7 (Children's H... 42 1.7
25emb|AL713981.17| Mouse DNA sequence from clone RP23-173O12 on ch... 42 1.7
26gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p... 42 1.7
27gb|AC093174.2| Homo sapiens chromosome 3 clone RP11-167M22 map 3... 42 1.7
28dbj|AP001324.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 1.7
29gb|AY795482.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily C, m... 40 6.7
30gb|AC146212.3| Pan troglodytes BAC clone RP43-33F1 from 7, compl... 40 6.7
31gb|AC032027.7| Homo sapiens chromosome 8, clone RP11-342K10, com... 40 6.7
32gb|AC006045.2| Homo sapiens BAC clone RP11-547G15 from 7, comple... 40 6.7
33emb|Z77249.2|HS358H7 Human DNA sequence from clone RP3-358H7 on ... 40 6.7
34emb|AL627133.5| Human DNA sequence from clone RP11-378O9 on chro... 40 6.7
35emb|AL357935.14| Human DNA sequence from clone RP11-80H12 on chr... 40 6.7
36emb|AL138955.14| Human DNA sequence from clone RP11-10E18 on chr... 40 6.7
37emb|AL157388.12| Human DNA sequence from clone RP11-215A21 on ch... 40 6.7
38gb|AC119044.6| Homo sapiens 12 BAC RP11-23J18 (Roswell Park Canc... 40 6.7
39emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 ... 40 6.7
40emb|BX294110.8| Zebrafish DNA sequence from clone DKEYP-19H3 in ... 40 6.7
41gb|AC103993.8| Homo sapiens chromosome 8, clone RP11-67H2, compl... 40 6.7
42gb|AC115282.2| Homo sapiens chromosome 3 clone RP11-122D19, comp... 40 6.7
43gb|AC116645.4| Homo sapiens BAC clone RP11-685C12 from 4, comple... 40 6.7
44gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence 40 6.7
45gb|AC112203.2| Homo sapiens chromosome 5 clone RP11-72K17, compl... 40 6.7
46gb|AC073588.3| Homo sapiens chromosome 10 clone RP11-96N16, comp... 40 6.7
47gb|AC084752.7| Homo sapiens BAC clone RP11-580J4 from 4, complet... 40 6.7
48gb|AC091984.3| Homo sapiens chromosome 5 clone RP11-569B13, comp... 40 6.7
49gb|AC106823.2| Homo sapiens chromosome 5 clone RP11-78N9, comple... 40 6.7
50gb|AC092421.2| Homo sapiens chromosome 3 clone RP11-476A24, comp... 40 6.7
51gb|AC091926.4| Homo sapiens chromosome 5 clone RP11-290G6, compl... 40 6.7
52gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.7
53gb|AF165124.1|AF165124 Homo sapiens chromosome 5q31.1-q33.1 clon... 40 6.7
54gb|AC116615.5| Homo sapiens BAC clone CTD-2080B4 from 4, complet... 40 6.7
55gb|AC079997.6| Homo sapiens BAC clone RP11-748B21 from 2, comple... 40 6.7
56gb|AC022413.4|AC022413 Homo sapiens chromosome 5 clone CTC-205M6... 40 6.7
57gb|AC093522.4| Homo sapiens chromosome 16 clone RP11-172I18, com... 40 6.7
58gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complet... 40 6.7
59gb|AC064853.6| Homo sapiens BAC clone RP11-185H21 from 2, comple... 40 6.7
60dbj|AP002062.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 6.7
61gb|AC004739.1|AC004739 Homo sapiens PAC clone RP4-531G15 from 7p... 40 6.7
62gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2... 40 6.7
63gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cance... 40 6.7
64emb|AL359398.2|CNS05TE1 Human chromosome 14 DNA sequence BAC R-3... 40 6.7
65emb|AL139354.6|CNS01DXK Human chromosome 14 DNA sequence BAC R-9... 40 6.7
66dbj|AP001528.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.7
67dbj|AP005355.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.7
68gb|AC005265.1|AC005265 Homo sapiens chromosome 19, cosmid F19750... 40 6.7
69gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complet... 40 6.7
70emb|AL357094.4|CNS05TDT Human chromosome 14 DNA sequence BAC R-1... 40 6.7
71dbj|AP005262.3| Homo sapiens genomic DNA, chromosome 18 clone:CT... 40 6.7 
>ref|NM_189499.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3105

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 125/153 (81%), Gaps = 1/153 (0%)
 Strand = Plus / Minus

                                                                        
Query: 332  tatattagcctacgctggcggaaccccttggtgaagtgaggctgcatcagcttgatgtac 391
            |||||||| ||||| || ||||| || |||||||| ||||| ||||||| |||||  |||
Sbjct: 3104 tatattagtctacgttgacggaatcctttggtgaaatgaggttgcatcaacttgacatac 3045

                                                                        
Query: 392  aatccattcatctgcaccagcgagtcgtgcgtnccttgctccacgatcttgccaccattt 451
            || |||||| | |||||||| || || ||||| || ||||| || ||||| |||||||| 
Sbjct: 3044 aacccattcttttgcaccagtgaatcatgcgttccctgctcaactatctttccaccattc 2985

                                             
Query: 452  gagcaccacgatgttgtccacatgctttatcat 484
             || || || ||||| ||||||||||| |||||
Sbjct: 2984 -agaacaacaatgttatccacatgcttcatcat 2953
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 125/153 (81%), Gaps = 1/153 (0%)
 Strand = Plus / Plus

                                                                            
Query: 332      tatattagcctacgctggcggaaccccttggtgaagtgaggctgcatcagcttgatgtac 391
                |||||||| ||||| || ||||| || |||||||| ||||| ||||||| |||||  |||
Sbjct: 43119050 tatattagtctacgttgacggaatcctttggtgaaatgaggttgcatcaacttgacatac 43119109

                                                                            
Query: 392      aatccattcatctgcaccagcgagtcgtgcgtnccttgctccacgatcttgccaccattt 451
                || |||||| | |||||||| || || ||||| || ||||| || ||||| |||||||| 
Sbjct: 43119110 aacccattcttttgcaccagtgaatcatgcgttccctgctcaactatctttccaccattc 43119169

                                                 
Query: 452      gagcaccacgatgttgtccacatgctttatcat 484
                 || || || ||||| ||||||||||| |||||
Sbjct: 43119170 -agaacaacaatgttatccacatgcttcatcat 43119201
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>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0459B04
          Length = 142475

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 125/153 (81%), Gaps = 1/153 (0%)
 Strand = Plus / Plus

                                                                          
Query: 332    tatattagcctacgctggcggaaccccttggtgaagtgaggctgcatcagcttgatgtac 391
              |||||||| ||||| || ||||| || |||||||| ||||| ||||||| |||||  |||
Sbjct: 116079 tatattagtctacgttgacggaatcctttggtgaaatgaggttgcatcaacttgacatac 116138

                                                                          
Query: 392    aatccattcatctgcaccagcgagtcgtgcgtnccttgctccacgatcttgccaccattt 451
              || |||||| | |||||||| || || ||||| || ||||| || ||||| |||||||| 
Sbjct: 116139 aacccattcttttgcaccagtgaatcatgcgttccctgctcaactatctttccaccattc 116198

                                               
Query: 452    gagcaccacgatgttgtccacatgctttatcat 484
               || || || ||||| ||||||||||| |||||
Sbjct: 116199 -agaacaacaatgttatccacatgcttcatcat 116230
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>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0020E09
          Length = 149195

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 125/153 (81%), Gaps = 1/153 (0%)
 Strand = Plus / Plus

                                                                        
Query: 332  tatattagcctacgctggcggaaccccttggtgaagtgaggctgcatcagcttgatgtac 391
            |||||||| ||||| || ||||| || |||||||| ||||| ||||||| |||||  |||
Sbjct: 6505 tatattagtctacgttgacggaatcctttggtgaaatgaggttgcatcaacttgacatac 6564

                                                                        
Query: 392  aatccattcatctgcaccagcgagtcgtgcgtnccttgctccacgatcttgccaccattt 451
            || |||||| | |||||||| || || ||||| || ||||| || ||||| |||||||| 
Sbjct: 6565 aacccattcttttgcaccagtgaatcatgcgttccctgctcaactatctttccaccattc 6624

                                             
Query: 452  gagcaccacgatgttgtccacatgctttatcat 484
             || || || ||||| ||||||||||| |||||
Sbjct: 6625 -agaacaacaatgttatccacatgcttcatcat 6656
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>emb|AJ535062.1|OSA535062 Oryza sativa (japonica cultivar-group) mdr10 gene for MDR-like ABC
            transporter, exons 1-11
          Length = 7544

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 125/153 (81%), Gaps = 1/153 (0%)
 Strand = Plus / Minus

                                                                        
Query: 332  tatattagcctacgctggcggaaccccttggtgaagtgaggctgcatcagcttgatgtac 391
            |||||||| ||||| || ||||| || |||||||| ||||| ||||||| |||||  |||
Sbjct: 7543 tatattagtctacgttgacggaatcctttggtgaaatgaggttgcatcaacttgacatac 7484

                                                                        
Query: 392  aatccattcatctgcaccagcgagtcgtgcgtnccttgctccacgatcttgccaccattt 451
            || |||||| | |||||||| || || ||||| || ||||| || ||||| |||||||| 
Sbjct: 7483 aacccattcttttgcaccagtgaatcatgcgttccctgctcaactatctttccaccattc 7424

                                             
Query: 452  gagcaccacgatgttgtccacatgctttatcat 484
             || || || ||||| ||||||||||| |||||
Sbjct: 7423 -agaacaacaatgttatccacatgcttcatcat 7392
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>gb|AC103896.3| Papio anubis clone RP41-441D23, complete sequence
          Length = 156540

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    ttccagctccatccatgcccc 78
             |||||||||||||||||||||
Sbjct: 65202 ttccagctccatccatgcccc 65182
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>gb|AY157024.2| Homo sapiens peroxisome proliferative activated receptor gamma (PPARG)
              gene, complete cds
          Length = 148828

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 58     ttccagctccatccatgcccc 78
              |||||||||||||||||||||
Sbjct: 101109 ttccagctccatccatgcccc 101129
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 462     atgttgtccacatgctttatcatggctgtcctgtgcg 498
               ||||| ||||||||||| ||||| |||| ||||||||
Sbjct: 9530036 atgttatccacatgcttcatcatcgctgccctgtgcg 9530072
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>gb|AC107024.5| Homo sapiens 3 BAC RP11-447J13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180216

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    ttccagctccatccatgcccc 78
             |||||||||||||||||||||
Sbjct: 35506 ttccagctccatccatgcccc 35486
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>emb|AL731550.11| Human DNA sequence from clone RP11-94H3 on chromosome 10 Contains the
             5' end of a novel gene, the 3' end of the MBL2 gene for
             mannose-binding lectin (protein C) 2 soluble (opsonic
             defect) and a CpG island, complete sequence
          Length = 102532

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    ttccagctccatccatgcccc 78
             |||||||||||||||||||||
Sbjct: 49760 ttccagctccatccatgcccc 49740
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>emb|AL606526.10| Human DNA sequence from clone RP13-534F18 on chromosome 1, complete
             sequence
          Length = 113654

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    ttccagctccatccatgcccc 78
             |||||||||||||||||||||
Sbjct: 43857 ttccagctccatccatgcccc 43837
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>emb|AL590669.11| Human DNA sequence from clone RP11-76K24 on chromosome 1 Contains the
             gene for a novel protein (FLJ35728) and a CpG island,
             complete sequence
          Length = 169226

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    ttccagctccatccatgcccc 78
             |||||||||||||||||||||
Sbjct: 15697 ttccagctccatccatgcccc 15717
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>emb|AL357512.15| Human DNA sequence from clone RP11-541J2 on chromosome 1 Contains a
            nicotinamide nucleotide adenylyltransferase 1 (NMNAT1)
            pseudogene and a high-mobility group box 3 (HMGB3)
            pseudogene, complete sequence
          Length = 184024

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 58   ttccagctccatccatgcccc 78
            |||||||||||||||||||||
Sbjct: 7404 ttccagctccatccatgcccc 7384
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>emb|AL121965.19|HSJ161I14 Human DNA sequence from clone RP1-161I14 on chromosome 6q16.1-16.3
             Contains part of the RNAH gene for an RNA helicase,
             complete sequence
          Length = 113022

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    ttccagctccatccatgcccc 78
             |||||||||||||||||||||
Sbjct: 80444 ttccagctccatccatgcccc 80464



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    ttccagctccatccatgcccc 78
             |||||||||||||||||||||
Sbjct: 79688 ttccagctccatccatgcccc 79708
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>emb|AL035686.15|HS965N20 Human DNA sequence from clone RP5-965N20 on chromosome 20q13.13-13.2
             Contains ESTs, STSs and GSSs, complete sequence
          Length = 127197

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    ttccagctccatccatgcccc 78
             |||||||||||||||||||||
Sbjct: 97622 ttccagctccatccatgcccc 97642
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>gb|AC108696.2| Homo sapiens 3 BAC RP11-731C8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157342

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    ttccagctccatccatgcccc 78
             |||||||||||||||||||||
Sbjct: 84828 ttccagctccatccatgcccc 84808
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>gb|AC022068.6| Homo sapiens chromosome 8, clone RP11-523C15, complete sequence
          Length = 202043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     ttccagctccatccatgcccc 78
              |||||||||||||||||||||
Sbjct: 139503 ttccagctccatccatgcccc 139483
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 462     atgttgtccacatgctttatcatggctgtcctgtgcg 498
               ||||| ||||||||||| ||||| |||| ||||||||
Sbjct: 9528157 atgttatccacatgcttcatcatcgctgccctgtgcg 9528193
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>gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C12 map 3p, complete sequence
          Length = 185608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     ttccagctccatccatgcccc 78
              |||||||||||||||||||||
Sbjct: 153991 ttccagctccatccatgcccc 153971
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>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009C19, from chromosome 3, complete sequence
          Length = 131709

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 462   atgttgtccacatgctttatcatggctgtcctgtgcg 498
             ||||| ||||||||||| ||||| |||| ||||||||
Sbjct: 82650 atgttatccacatgcttcatcatcgctgccctgtgcg 82614
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>dbj|AK120269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047J23, full
            insert sequence
          Length = 5071

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 462  atgttgtccacatgctttatcatggctgtcctgtgcg 498
            ||||| ||||||||||| ||||| |||| ||||||||
Sbjct: 4555 atgttatccacatgcttcatcatcgctgccctgtgcg 4519
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>dbj|AP001874.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2238L14, complete
             sequence
          Length = 124167

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    ttccagctccatccatgcccc 78
             |||||||||||||||||||||
Sbjct: 60022 ttccagctccatccatgcccc 60042
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>dbj|AP000560.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-8M21, complete
             sequence
          Length = 118300

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    ttccagctccatccatgcccc 78
             |||||||||||||||||||||
Sbjct: 81244 ttccagctccatccatgcccc 81224
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>gb|AC171072.2| Rhesus Macaque CHR7 BAC CH250-508E7 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 165491

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     ttccagctccatccatgcccc 78
              |||||||||||||||||||||
Sbjct: 136769 ttccagctccatccatgcccc 136749
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>emb|AL713981.17| Mouse DNA sequence from clone RP23-173O12 on chromosome 2, complete
              sequence
          Length = 223609

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 20     gagccgatctgatgcaccaagttca 44
              |||| ||||||||||||||||||||
Sbjct: 150258 gagcagatctgatgcaccaagttca 150282
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>gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p, complete sequence
          Length = 166049

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     ttccagctccatccatgcccc 78
              |||||||||||||||||||||
Sbjct: 109774 ttccagctccatccatgcccc 109754
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>gb|AC093174.2| Homo sapiens chromosome 3 clone RP11-167M22 map 3p, complete sequence
          Length = 135675

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 58     ttccagctccatccatgcccc 78
              |||||||||||||||||||||
Sbjct: 117237 ttccagctccatccatgcccc 117257
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>dbj|AP001324.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-864N7, complete
              sequences
          Length = 230157

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     ttccagctccatccatgcccc 78
              |||||||||||||||||||||
Sbjct: 208511 ttccagctccatccatgcccc 208491
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>gb|AY795482.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 3 (DNAJC3) gene,
              complete cds
          Length = 117695

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 114185 tccagctccatccatgcccc 114204
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>gb|AC146212.3| Pan troglodytes BAC clone RP43-33F1 from 7, complete sequence
          Length = 138501

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 13351 tccagctccatccatgcccc 13370
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>gb|AC032027.7| Homo sapiens chromosome 8, clone RP11-342K10, complete sequence
          Length = 179063

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 43389 tccagctccatccatgcccc 43408
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>gb|AC006045.2| Homo sapiens BAC clone RP11-547G15 from 7, complete sequence
          Length = 193126

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 135045 tccagctccatccatgcccc 135026
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>emb|Z77249.2|HS358H7 Human DNA sequence from clone RP3-358H7 on chromosome X Contains a
             DEAD-box protein pseudogene and the gene for a novel
             E2F-like protein (LOC51270), complete sequence
          Length = 148864

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 86403 tccagctccatccatgcccc 86422
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>emb|AL627133.5| Human DNA sequence from clone RP11-378O9 on chromosome X, complete
             sequence
          Length = 129007

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    ttccagctccatccatgccc 77
             ||||||||||||||||||||
Sbjct: 54970 ttccagctccatccatgccc 54989
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>emb|AL357935.14| Human DNA sequence from clone RP11-80H12 on chromosome 9 Contains the
             5' end of the gene for a novel protein (FLJ20300), a
             glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene
             and two CpG islands, complete sequence
          Length = 169047

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 61116 tccagctccatccatgcccc 61097
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>emb|AL138955.14| Human DNA sequence from clone RP11-10E18 on chromosome 13 Contains the 5'
              UTR of the gene for novel zinc-finger protein (DZIP1,
              KIAA0996), the 3' end of the DNAJC3 gene for DnaJ (Hsp40)
              homolog, subfamily C, member 3, a pseudogene similar to
              part of NADH dehydrogenase 5 (MTND5) , a novel cytochrome B
              pseudogene, a NADH dehydrogenase 6 (MTND6) pseudogene and 4
              CpG islands, complete sequence
          Length = 149704

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 145930 tccagctccatccatgcccc 145949
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>emb|AL157388.12| Human DNA sequence from clone RP11-215A21 on chromosome 10 Contains the
              5' end of a novel gene (MGC33215), a ribosomal protein L17
              (rpL23) (RPL17) pseudogene and three CpG islands, complete
              sequence
          Length = 183382

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 172123 tccagctccatccatgcccc 172104
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>gb|AC119044.6| Homo sapiens 12 BAC RP11-23J18 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 108899

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 58   ttccagctccatccatgccc 77
            ||||||||||||||||||||
Sbjct: 4012 ttccagctccatccatgccc 3993
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>emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 in linkage group 25,
             complete sequence
          Length = 225139

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ctgccttccatccatgtttg 248
             ||||||||||||||||||||
Sbjct: 88365 ctgccttccatccatgtttg 88384
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>emb|BX294110.8| Zebrafish DNA sequence from clone DKEYP-19H3 in linkage group 25,
              complete sequence
          Length = 176023

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    ctgccttccatccatgtttg 248
              ||||||||||||||||||||
Sbjct: 131048 ctgccttccatccatgtttg 131029
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>gb|AC103993.8| Homo sapiens chromosome 8, clone RP11-67H2, complete sequence
          Length = 147742

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 25160 tccagctccatccatgcccc 25141
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>gb|AC115282.2| Homo sapiens chromosome 3 clone RP11-122D19, complete sequence
          Length = 181061

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    attccagctccatccatgcc 76
             ||||||||||||||||||||
Sbjct: 19917 attccagctccatccatgcc 19898
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>gb|AC116645.4| Homo sapiens BAC clone RP11-685C12 from 4, complete sequence
          Length = 155761

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 96139 tccagctccatccatgcccc 96120
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>gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence
          Length = 202653

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 170654 tccagctccatccatgcccc 170673
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>gb|AC112203.2| Homo sapiens chromosome 5 clone RP11-72K17, complete sequence
          Length = 165916

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 120494 tccagctccatccatgcccc 120475
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>gb|AC073588.3| Homo sapiens chromosome 10 clone RP11-96N16, complete sequence
          Length = 166120

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 118731 tccagctccatccatgcccc 118750
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>gb|AC084752.7| Homo sapiens BAC clone RP11-580J4 from 4, complete sequence
          Length = 120423

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 76871 tccagctccatccatgcccc 76852
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>gb|AC091984.3| Homo sapiens chromosome 5 clone RP11-569B13, complete sequence
          Length = 207040

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 171918 tccagctccatccatgcccc 171937
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>gb|AC106823.2| Homo sapiens chromosome 5 clone RP11-78N9, complete sequence
          Length = 60329

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 48969 tccagctccatccatgcccc 48950
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>gb|AC092421.2| Homo sapiens chromosome 3 clone RP11-476A24, complete sequence
          Length = 160726

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 109759 tccagctccatccatgcccc 109740
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>gb|AC091926.4| Homo sapiens chromosome 5 clone RP11-290G6, complete sequence
          Length = 209836

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 116614 tccagctccatccatgcccc 116633
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>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
               complete sequence
          Length = 1466886

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 171     ttctgtcggaccacgcacaaatag 194
               |||||||||| |||||||||||||
Sbjct: 1139455 ttctgtcggatcacgcacaaatag 1139478
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>gb|AF165124.1|AF165124 Homo sapiens chromosome 5q31.1-q33.1 clone BAC djn082c10 containing
             GABRG2 gene, complete sequence
          Length = 195909

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 52880 tccagctccatccatgcccc 52899
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>gb|AC116615.5| Homo sapiens BAC clone CTD-2080B4 from 4, complete sequence
          Length = 132323

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 33449 tccagctccatccatgcccc 33468
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>gb|AC079997.6| Homo sapiens BAC clone RP11-748B21 from 2, complete sequence
          Length = 118577

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 115665 tccagctccatccatgcccc 115646
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>gb|AC022413.4|AC022413 Homo sapiens chromosome 5 clone CTC-205M6, complete sequence
          Length = 166525

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 154173 tccagctccatccatgcccc 154192
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>gb|AC093522.4| Homo sapiens chromosome 16 clone RP11-172I18, complete sequence
          Length = 162017

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     aaatgacaaataccaatata 111
              ||||||||||||||||||||
Sbjct: 142333 aaatgacaaataccaatata 142314
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>gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complete sequence
          Length = 182632

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 31217 tccagctccatccatgcccc 31236
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>gb|AC064853.6| Homo sapiens BAC clone RP11-185H21 from 2, complete sequence
          Length = 137247

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   tccagctccatccatgcccc 78
            ||||||||||||||||||||
Sbjct: 6447 tccagctccatccatgcccc 6466
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>dbj|AP002062.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T22B15
          Length = 112406

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 145   atattgaataccatctcccaatcctatt 172
             ||||| |||||||||||| |||||||||
Sbjct: 85374 atatttaataccatctcctaatcctatt 85347
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>gb|AC004739.1|AC004739 Homo sapiens PAC clone RP4-531G15 from 7p21, complete sequence
          Length = 97979

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 85608 tccagctccatccatgcccc 85589
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>gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2, complete sequence
          Length = 189949

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 178425 tccagctccatccatgcccc 178406
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>gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228417

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    ccatctcccaatcctattct 174
              ||||||||||||||||||||
Sbjct: 183637 ccatctcccaatcctattct 183656
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>emb|AL359398.2|CNS05TE1 Human chromosome 14 DNA sequence BAC R-369C8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176399

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 45506 tccagctccatccatgcccc 45525
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>emb|AL139354.6|CNS01DXK Human chromosome 14 DNA sequence BAC R-945F5 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 201539

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 174584 tccagctccatccatgcccc 174603
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>dbj|AP001528.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736K20, complete
              sequence
          Length = 155523

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     tccagctccatccatgcccc 78
              ||||||||||||||||||||
Sbjct: 127329 tccagctccatccatgcccc 127348
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>dbj|AP005355.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1189A8, complete
             sequence
          Length = 151101

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 36857 tccagctccatccatgcccc 36838
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>gb|AC005265.1|AC005265 Homo sapiens chromosome 19, cosmid F19750, complete sequence
          Length = 43900

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 13787 tccagctccatccatgcccc 13806
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>gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complete sequence
          Length = 189521

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   ccatctcccaatcctattct 174
             ||||||||||||||||||||
Sbjct: 86208 ccatctcccaatcctattct 86189
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>emb|AL357094.4|CNS05TDT Human chromosome 14 DNA sequence BAC R-14N4 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158151

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 93    aatgacaaataccaatatatagaa 116
             ||||||||| ||||||||||||||
Sbjct: 39574 aatgacaaagaccaatatatagaa 39551
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>dbj|AP005262.3| Homo sapiens genomic DNA, chromosome 18 clone:CTD-2533G20, complete
             sequence
          Length = 113000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tccagctccatccatgcccc 78
             ||||||||||||||||||||
Sbjct: 54736 tccagctccatccatgcccc 54755


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,941,439
Number of Sequences: 3902068
Number of extensions: 3941439
Number of successful extensions: 74378
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 74213
Number of HSP's gapped (non-prelim): 174
length of query: 498
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 476
effective length of database: 17,147,199,772
effective search space: 8162067091472
effective search space used: 8162067091472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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