| Clone Name | rbaal1d03 |
|---|---|
| Clone Library Name | barley_pub |
>MPP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protein MPP10 (M| phase phosphoprotein 10) Length = 681 Score = 45.8 bits (107), Expect = 7e-05 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Frame = -3 Query: 514 EVAPVAVSDAAMLAPEEVFEGK--GDIKEDAELTQAEXXXXXXXXXXRYAESHKERPAKL 341 EVAPV+VSDAA+LAPEE+ E GDIK AE T + + KE+ + Sbjct: 537 EVAPVSVSDAALLAPEEIKEKNKAGDIKTAAEKTATDKKRERRKKKYQKRMKIKEKEKRR 596 Query: 340 RKEETSNI*EAAAYMLCIAN 281 + E S++ +A Y +A+ Sbjct: 597 KLLEKSSVDQAGKYSKTVAS 616
>MPP10_MOUSE (Q810V0) U3 small nucleolar ribonucleoprotein protein MPP10 (M| phase phosphoprotein 10) Length = 681 Score = 40.4 bits (93), Expect = 0.003 Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 2/37 (5%) Frame = -3 Query: 514 EVAPVAVSDAAMLAPEEVFEGK--GDIKEDAELTQAE 410 EVAPV+VSDAA+LAPEE+ E GD+K AE T + Sbjct: 538 EVAPVSVSDAALLAPEEIKEKNKAGDLKTAAEKTATD 574
>MPP10_SCHPO (O13910) U3 small nucleolar ribonucleoprotein protein mpp10| Length = 598 Score = 30.0 bits (66), Expect = 3.9 Identities = 15/68 (22%), Positives = 31/68 (45%) Frame = -3 Query: 514 EVAPVAVSDAAMLAPEEVFEGKGDIKEDAELTQAEXXXXXXXXXXRYAESHKERPAKLRK 335 +V P A SD LAP+EV++ + +E +T++ + ++ + R + Sbjct: 482 DVQPTAASDTMALAPQEVYKPSNENREGETITRSGIAISSTEMDHQQKQARRRRVRRKHA 541 Query: 334 EETSNI*E 311 E+ + E Sbjct: 542 EKRKQMAE 549
>GTR8_RAT (Q9JJZ1) Solute carrier family 2, facilitated glucose transporter| member 8 (Glucose transporter type 8) (Glucose transporter type X1) Length = 478 Score = 29.6 bits (65), Expect = 5.1 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -2 Query: 278 LELEGGPPPTVQLLLTCYVLQTFRNLMPGLQFQ 180 L + G PPT+ LLL CY+ +T R L+ Q+Q Sbjct: 184 LAVLGCVPPTLMLLLMCYMPETPRFLLTQHQYQ 216
>GTR8_MOUSE (Q9JIF3) Solute carrier family 2, facilitated glucose transporter| member 8 (Glucose transporter type 8) (Glucose transporter type X1) Length = 477 Score = 29.6 bits (65), Expect = 5.1 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -2 Query: 278 LELEGGPPPTVQLLLTCYVLQTFRNLMPGLQFQ 180 L + G PPT+ LLL CY+ +T R L+ Q+Q Sbjct: 184 LAVLGCVPPTLMLLLMCYMPETPRFLLTQHQYQ 216 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,919,687 Number of Sequences: 219361 Number of extensions: 1256124 Number of successful extensions: 3189 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3189 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)