| Clone Name | rbags24j10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC018618.5|AC018618 Homo sapiens chromosome 15, clone RP11-162I7, complete sequence Length = 156542 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 gtgctgaagcccactcggcag 220 ||||||||||||||||||||| Sbjct: 9122 gtgctgaagcccactcggcag 9142
>gb|AC008212.8|AC008212 Drosophila melanogaster, chromosome 3R, region 97A-97B, BAC clone BACR19L21, complete sequence Length = 162876 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ccttccctcggttttttatgg 184 ||||||||||||||||||||| Sbjct: 48462 ccttccctcggttttttatgg 48442
>gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94 of 118 of the complete sequence Length = 322332 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ccttccctcggttttttatgg 184 ||||||||||||||||||||| Sbjct: 22309 ccttccctcggttttttatgg 22289
>gb|AC134521.41| Medicago truncatula clone mth2-31k24, complete sequence Length = 132267 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 agataacatacaacaactcatgat 159 ||||||||||||||| |||||||| Sbjct: 109896 agataacatacaacatctcatgat 109919
>gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete sequence Length = 113836 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 agataacatacaacaactcatgat 159 ||||||||||||||| |||||||| Sbjct: 35372 agataacatacaacatctcatgat 35349
>emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3, COMPLETE SEQUENCE Length = 136080 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 agataacatacaacaactcatgat 159 ||||||||||||||| |||||||| Sbjct: 114721 agataacatacaacatctcatgat 114744
>emb|BX950854.12| Zebrafish DNA sequence from clone CH211-125M22, complete sequence Length = 171896 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tgccagagcatttctacaat 284 |||||||||||||||||||| Sbjct: 171049 tgccagagcatttctacaat 171030
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggcagataacatacaacaa 151 |||||||||||||||||||| Sbjct: 16244252 aggcagataacatacaacaa 16244271
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggcagataacatacaacaa 151 |||||||||||||||||||| Sbjct: 16197485 aggcagataacatacaacaa 16197504
>emb|BX672566.2|CNS09SC4 Oryza sativa chromosome 12, . Partial sequence from BAC B1004E12 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 24190 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggcagataacatacaacaa 151 |||||||||||||||||||| Sbjct: 14107 aggcagataacatacaacaa 14126 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,279,803 Number of Sequences: 3902068 Number of extensions: 2279803 Number of successful extensions: 35164 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 35130 Number of HSP's gapped (non-prelim): 34 length of query: 288 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 266 effective length of database: 17,147,199,772 effective search space: 4561155139352 effective search space used: 4561155139352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)