ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24j07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY596597.1| Saccharum officinarum clone SCCCLR1C01H06, comple... 155 2e-34
2gb|AY104701.1| Zea mays PCO096148 mRNA sequence 155 2e-34
3ref|XM_472924.1| Oryza sativa (japonica cultivar-group), predic... 98 4e-17
4emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,... 98 4e-17
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
6dbj|AK068497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 4e-17
7gb|BC070577.1| Xenopus laevis hypothetical protein MGC81066, mRN... 44 0.47
8gb|AC124684.3| Mus musculus BAC clone RP24-375D13 from chromosom... 42 1.9
9ref|XM_757637.1| Theileria parva strain Muguga hypothetical prot... 42 1.9
10ref|XM_757625.1| Theileria parva strain Muguga chromosome 3 hypo... 42 1.9
11emb|AL928651.13| Mouse DNA sequence from clone RP23-167A19 on ch... 42 1.9
12gb|AC153644.3| Mus musculus BAC clone RP24-531A1 from 1, complet... 42 1.9
13ref|XM_529073.1| PREDICTED: Pan troglodytes similar to TGF beta-... 40 7.4
14ref|XM_517704.1| PREDICTED: Pan troglodytes similar to TGF beta-... 40 7.4
15ref|NM_001034546.1| Bos taurus similar to TGF beta-inducible nuc... 40 7.4
16ref|XM_587457.2| PREDICTED: Bos taurus similar to putative secre... 40 7.4
17gb|AC146277.2| Pan troglodytes BAC clone CH251-17J20 from X, com... 40 7.4
18gb|AC146276.2| Pan troglodytes BAC clone CH251-149B14 from X, co... 40 7.4
19gb|AC144386.2| Pan troglodytes BAC clone CH251-313C12 from X, co... 40 7.4
20emb|CR792425.6| Zebrafish DNA sequence from clone DKEY-81N9 in l... 40 7.4
21gb|BC062441.1| Homo sapiens cDNA clone IMAGE:6621304, partial cds 40 7.4
22emb|Z73417.1|HSU131B10 Human DNA sequence from clone LL0XNC01-13... 40 7.4
23emb|Z70226.1|HSV1077H7 Human DNA sequence from clone GHc-1077H7 ... 40 7.4
24emb|AL590396.13| Human DNA sequence from clone RP11-193H5 on chr... 40 7.4
25emb|AL590069.5| Human DNA sequence from clone RP11-353J17 on chr... 40 7.4
26gb|BC005288.1| Homo sapiens TGF beta-inducible nuclear protein 1... 40 7.4
27gb|BC104563.1| Bos taurus similar to TGF beta-inducible nuclear ... 40 7.4
28emb|CR620162.1| full-length cDNA clone CS0DB009YD21 of Neuroblas... 40 7.4
29emb|CR614877.1| full-length cDNA clone CS0DB002YH16 of Neuroblas... 40 7.4
30emb|CR613056.1| full-length cDNA clone CS0DB004YN05 of Neuroblas... 40 7.4
31emb|CR600412.1| full-length cDNA clone CS0DI025YI23 of Placenta ... 40 7.4
32gb|AC092793.5| Homo sapiens 12p BAC RP11-74N9 (Roswell Park Canc... 40 7.4
33gb|AC093214.2| Homo sapiens chromosome 5 clone CTD-2060C23, comp... 40 7.4
34gb|AC016594.7| Homo sapiens chromosome 5 clone CTD-2010O3, compl... 40 7.4
35gb|AF372458.1|AF372458 Homo sapiens hairy cell leukemia protein ... 40 7.4
36ref|NM_014886.2| Homo sapiens TGF beta-inducible nuclear protein... 40 7.4
37gb|AF077615.1|AF077615 Homo sapiens TGF beta inducible nuclear p... 40 7.4
38gb|AC092641.2| Homo sapiens BAC clone RP11-389F18 from 2, comple... 40 7.4
39emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chro... 40 7.4
40emb|AJ012409.1|HSA012409 Homo sapiens mRNA for hypothetical prot... 40 7.4
41emb|CR974440.6| Zebrafish DNA sequence from clone CH73-78M16 in ... 40 7.4
42gb|AY443419.1| Homo sapiens TGF-beta inducible nuclear protein (... 40 7.4 
>gb|AY596597.1| Saccharum officinarum clone SCCCLR1C01H06, complete sequence
          Length = 2436

 Score =  155 bits (78), Expect = 2e-34
 Identities = 165/193 (85%), Gaps = 1/193 (0%)
 Strand = Plus / Minus

                                                                        
Query: 335  ggaggcgaaggaaggtagcagccagccgcgctctgtcgcaagctccacgtagcctctgaa 394
            |||||||||||  || |||||||||||||||||||| || |||||||| ||  |||  ||
Sbjct: 2162 ggaggcgaaggtcggcagcagccagccgcgctctgttgcgagctccacatactctccaaa 2103

                                                                        
Query: 395  cttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttccttgacacgagc 454
            ||||||||| || ||||||||||| ||| ||||||| || ||||||||||||||||| ||
Sbjct: 2102 cttctcctgagcatttgggatgtcgaggatcagatcatcaaggccttccttgacacgggc 2043

                                                                        
Query: 455  aaaaccgttggtcatctggtttgatggttatcagcccntccccggagcacttctgcaaga 514
            ||| || |||||||||||| ||||||||||||||||| || ||| | |||| |||||  |
Sbjct: 2042 aaagcctttggtcatctgg-ttgatggttatcagcccctcgccgaaacactcctgcagca 1984

                         
Query: 515  gagccaagatgct 527
            | |||||||||||
Sbjct: 1983 gggccaagatgct 1971
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>gb|AY104701.1| Zea mays PCO096148 mRNA sequence
          Length = 2251

 Score =  155 bits (78), Expect = 2e-34
 Identities = 186/221 (84%), Gaps = 1/221 (0%)
 Strand = Plus / Minus

                                                                        
Query: 324  gctcagggcagggaggcgaaggaaggtagcagccagccgcgctctgtcgcaagctccacg 383
            |||||||| | |||||||||||  || |||||||||||||||||||| || |||||||| 
Sbjct: 1977 gctcagggaacggaggcgaaggtcggcagcagccagccgcgctctgttgccagctccaca 1918

                                                                        
Query: 384  tagcctctgaacttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttcc 443
            ||  |||  ||||||||||| || ||||||||||| ||| ||||||| || |||||||||
Sbjct: 1917 tactctccaaacttctcctgggcatttgggatgtcgaggatcagatcatcaaggccttcc 1858

                                                                        
Query: 444  ttgacacgagcaaaaccgttggtcatctggtttgatggttatcagcccntccccggagca 503
            |||||||| ||||| || |||||||||||| ||||||||||| ||||| || ||| | ||
Sbjct: 1857 ttgacacgggcaaagcctttggtcatctgg-ttgatggttatgagcccctcgccgaaaca 1799

                                                     
Query: 504  cttctgcaagagagccaagatgctagcttcattctgcttct 544
            || |||||  ||  |||||||||| |  |||||||||||||
Sbjct: 1798 ctcctgcagcaggaccaagatgctggtgtcattctgcttct 1758
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>ref|XM_472924.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1989

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 127/152 (83%), Gaps = 1/152 (0%)
 Strand = Plus / Minus

                                                                        
Query: 393  aacttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttccttgacacga 452
            ||||||||||| || ||||||||||| ||| ||||||| ||||||||||||||||| |||
Sbjct: 1931 aacttctcctgtgcatttgggatgtcgaggatcagatcatcgaggccttccttgacgcga 1872

                                                                        
Query: 453  gcaaaaccgttggtcatctggtttgatggttatcagcccntccccggagcacttctgcaa 512
            |  || ||    ||||||||| ||||| ||||||||||| || ||| |||||| ||| | 
Sbjct: 1871 gtgaagcctaatgtcatctgg-ttgattgttatcagcccctcaccgaagcactcctgtag 1813

                                            
Query: 513  gagagccaagatgctagcttcattctgcttct 544
             ||||||||||| || |||||||||| |||||
Sbjct: 1812 cagagccaagatccttgcttcattctccttct 1781
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>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
              complete sequence
          Length = 129498

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 127/152 (83%), Gaps = 1/152 (0%)
 Strand = Plus / Plus

                                                                          
Query: 393    aacttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttccttgacacga 452
              ||||||||||| || ||||||||||| ||| ||||||| ||||||||||||||||| |||
Sbjct: 106629 aacttctcctgtgcatttgggatgtcgaggatcagatcatcgaggccttccttgacgcga 106688

                                                                          
Query: 453    gcaaaaccgttggtcatctggtttgatggttatcagcccntccccggagcacttctgcaa 512
              |  || ||    ||||||||| ||||| ||||||||||| || ||| |||||| ||| | 
Sbjct: 106689 gtgaagcctaatgtcatctgg-ttgattgttatcagcccctcaccgaagcactcctgtag 106747

                                              
Query: 513    gagagccaagatgctagcttcattctgcttct 544
               ||||||||||| || |||||||||| |||||
Sbjct: 106748 cagagccaagatccttgcttcattctccttct 106779
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 127/152 (83%), Gaps = 1/152 (0%)
 Strand = Plus / Plus

                                                                            
Query: 393      aacttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttccttgacacga 452
                ||||||||||| || ||||||||||| ||| ||||||| ||||||||||||||||| |||
Sbjct: 24109650 aacttctcctgtgcatttgggatgtcgaggatcagatcatcgaggccttccttgacgcga 24109709

                                                                            
Query: 453      gcaaaaccgttggtcatctggtttgatggttatcagcccntccccggagcacttctgcaa 512
                |  || ||    ||||||||| ||||| ||||||||||| || ||| |||||| ||| | 
Sbjct: 24109710 gtgaagcctaatgtcatctgg-ttgattgttatcagcccctcaccgaagcactcctgtag 24109768

                                                
Query: 513      gagagccaagatgctagcttcattctgcttct 544
                 ||||||||||| || |||||||||| |||||
Sbjct: 24109769 cagagccaagatccttgcttcattctccttct 24109800
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>dbj|AK068497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155G23, full
            insert sequence
          Length = 2486

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 127/152 (83%), Gaps = 1/152 (0%)
 Strand = Plus / Minus

                                                                        
Query: 393  aacttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttccttgacacga 452
            ||||||||||| || ||||||||||| ||| ||||||| ||||||||||||||||| |||
Sbjct: 2078 aacttctcctgtgcatttgggatgtcgaggatcagatcatcgaggccttccttgacgcga 2019

                                                                        
Query: 453  gcaaaaccgttggtcatctggtttgatggttatcagcccntccccggagcacttctgcaa 512
            |  || ||    ||||||||| ||||| ||||||||||| || ||| |||||| ||| | 
Sbjct: 2018 gtgaagcctaatgtcatctgg-ttgattgttatcagcccctcaccgaagcactcctgtag 1960

                                            
Query: 513  gagagccaagatgctagcttcattctgcttct 544
             ||||||||||| || |||||||||| |||||
Sbjct: 1959 cagagccaagatccttgcttcattctccttct 1928
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>gb|BC070577.1| Xenopus laevis hypothetical protein MGC81066, mRNA (cDNA clone
           MGC:81066 IMAGE:6316522), complete cds
          Length = 3608

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 293 ttcttcaagcttagccgtctgt 314
           ||||||||||||||||||||||
Sbjct: 796 ttcttcaagcttagccgtctgt 817
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>gb|AC124684.3| Mus musculus BAC clone RP24-375D13 from chromosome 1, complete sequence
          Length = 167927

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     catcctgaactgaaagccatg 85
              |||||||||||||||||||||
Sbjct: 103629 catcctgaactgaaagccatg 103649
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>ref|XM_757637.1| Theileria parva strain Muguga hypothetical protein (TP03_0915)
           partial mRNA
          Length = 2049

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 gtcacggaccaatacacccaa 172
           |||||||||||||||||||||
Sbjct: 418 gtcacggaccaatacacccaa 438
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>ref|XM_757625.1| Theileria parva strain Muguga chromosome 3 hypothetical protein
           (TP03_0927) partial mRNA
          Length = 2049

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 gtcacggaccaatacacccaa 172
           |||||||||||||||||||||
Sbjct: 418 gtcacggaccaatacacccaa 438
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>emb|AL928651.13| Mouse DNA sequence from clone RP23-167A19 on chromosome 4 Contains a
             3-hydroxyisobutyrate dehydrogenase, mitochondrial
             precursor (Hibadh) pseudogene and a CpG island, complete
             sequence
          Length = 157883

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 212   cagaaaagactaggaacagaagaaa 236
             ||||| |||||||||||||||||||
Sbjct: 40882 cagaacagactaggaacagaagaaa 40906
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>gb|AC153644.3| Mus musculus BAC clone RP24-531A1 from 1, complete sequence
          Length = 166988

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 65   catcctgaactgaaagccatg 85
            |||||||||||||||||||||
Sbjct: 3686 catcctgaactgaaagccatg 3706
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>ref|XM_529073.1| PREDICTED: Pan troglodytes similar to TGF beta-inducible nuclear
           protein 1; L-name related protein (LOC473700), mRNA
          Length = 561

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 330 acatcctgaactgaaagcca 349
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>ref|XM_517704.1| PREDICTED: Pan troglodytes similar to TGF beta-inducible nuclear
           protein 1 (Hairy cell leukemia protein 1) (HUSSY-29)
           (LOC461806), mRNA
          Length = 855

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 642 acatcctgaactgaaagcca 661
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>ref|NM_001034546.1| Bos taurus similar to TGF beta-inducible nuclear protein 1 (L-name
           related LNR42) (MGC128494), mRNA
          Length = 1173

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 666 acatcctgaactgaaagcca 685
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>ref|XM_587457.2| PREDICTED: Bos taurus similar to putative secretory pathway
           Ca-ATPase SPCA2 (LOC510329), mRNA
          Length = 3147

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 gggaagagctcagggcaggg 336
           ||||||||||||||||||||
Sbjct: 53  gggaagagctcagggcaggg 34
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>gb|AC146277.2| Pan troglodytes BAC clone CH251-17J20 from X, complete sequence
          Length = 160219

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 316    ggggaagagctcagggcagggagg 339
              |||||||||||| |||||||||||
Sbjct: 139225 ggggaagagctctgggcagggagg 139202
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>gb|AC146276.2| Pan troglodytes BAC clone CH251-149B14 from X, complete sequence
          Length = 180335

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 316   ggggaagagctcagggcagggagg 339
             |||||||||||| |||||||||||
Sbjct: 58910 ggggaagagctctgggcagggagg 58933
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>gb|AC144386.2| Pan troglodytes BAC clone CH251-313C12 from X, complete sequence
          Length = 202661

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 316    ggggaagagctcagggcagggagg 339
              |||||||||||| |||||||||||
Sbjct: 153665 ggggaagagctctgggcagggagg 153688
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>emb|CR792425.6| Zebrafish DNA sequence from clone DKEY-81N9 in linkage group 2, complete
              sequence
          Length = 168311

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     gctacttcaaaacaactcca 109
              ||||||||||||||||||||
Sbjct: 163271 gctacttcaaaacaactcca 163290
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>gb|BC062441.1| Homo sapiens cDNA clone IMAGE:6621304, partial cds
          Length = 706

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 316 ggggaagagctcagggcagggagg 339
           |||||||||||| |||||||||||
Sbjct: 351 ggggaagagctctgggcagggagg 328
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>emb|Z73417.1|HSU131B10 Human DNA sequence from clone LL0XNC01-131B10 on chromosome X Contains
             a novel gene similar to McLeod syndrome-associated, Kell
             blood group protein; membrane transport protein
             (LOC347425), a TGF beta-inducible nuclear protein 1
             (TINP1) pseudogene and one CpG island, complete sequence
          Length = 37650

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    acatcctgaactgaaagcca 83
             ||||||||||||||||||||
Sbjct: 29377 acatcctgaactgaaagcca 29358
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>emb|Z70226.1|HSV1077H7 Human DNA sequence from clone GHc-1077H7 on chromosome X Contains part
             of the NXF2 gene for nuclear RNA export factor 2 and a
             preferentially expressed antigen in melanoma (PRAME)
             pseudogene, complete sequence
          Length = 32374

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 316   ggggaagagctcagggcagggagg 339
             |||||||||||| |||||||||||
Sbjct: 28009 ggggaagagctctgggcagggagg 27986
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>emb|AL590396.13| Human DNA sequence from clone RP11-193H5 on chromosome 1 Contains the
             3' end of a novel gene (LOC401987), a actin pseudogene, a
             cytochrome b (MTCYB) pseudogene, a NADH dehydrogenase 6
             (MTND6) pseudogene and a NADH dehydrogenase 5 (MTND5)
             pseudogene, complete sequence
          Length = 122108

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   aggaacagaagaaaaagaag 242
             ||||||||||||||||||||
Sbjct: 67746 aggaacagaagaaaaagaag 67765
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>emb|AL590069.5| Human DNA sequence from clone RP11-353J17 on chromosome X, complete
             sequence
          Length = 158828

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 316   ggggaagagctcagggcagggagg 339
             |||||||||||| |||||||||||
Sbjct: 95158 ggggaagagctctgggcagggagg 95181
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>gb|BC005288.1| Homo sapiens TGF beta-inducible nuclear protein 1, mRNA (cDNA clone
           MGC:12345 IMAGE:3683720), complete cds
          Length = 1052

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 665 acatcctgaactgaaagcca 684
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>gb|BC104563.1| Bos taurus similar to TGF beta-inducible nuclear protein 1 (L-name
           related LNR42), mRNA (cDNA clone MGC:128494
           IMAGE:7984598), complete cds
          Length = 1173

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 666 acatcctgaactgaaagcca 685
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>emb|CR620162.1| full-length cDNA clone CS0DB009YD21 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 1012

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 649 acatcctgaactgaaagcca 668
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>emb|CR614877.1| full-length cDNA clone CS0DB002YH16 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 950

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 660 acatcctgaactgaaagcca 679
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>emb|CR613056.1| full-length cDNA clone CS0DB004YN05 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 990

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 653 acatcctgaactgaaagcca 672
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>emb|CR600412.1| full-length cDNA clone CS0DI025YI23 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 996

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 628 acatcctgaactgaaagcca 647
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>gb|AC092793.5| Homo sapiens 12p BAC RP11-74N9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 76000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   aggaacagaagaaaaagaag 242
             ||||||||||||||||||||
Sbjct: 73254 aggaacagaagaaaaagaag 73273
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>gb|AC093214.2| Homo sapiens chromosome 5 clone CTD-2060C23, complete sequence
          Length = 148327

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    acatcctgaactgaaagcca 83
             ||||||||||||||||||||
Sbjct: 89320 acatcctgaactgaaagcca 89339
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>gb|AC016594.7| Homo sapiens chromosome 5 clone CTD-2010O3, complete sequence
          Length = 146235

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    acatcctgaactgaaagcca 83
             ||||||||||||||||||||
Sbjct: 57698 acatcctgaactgaaagcca 57717
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>gb|AF372458.1|AF372458 Homo sapiens hairy cell leukemia protein 1 mRNA, complete cds
          Length = 1042

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 647 acatcctgaactgaaagcca 666
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>ref|NM_014886.2| Homo sapiens TGF beta-inducible nuclear protein 1 (TINP1), mRNA
          Length = 1105

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 636 acatcctgaactgaaagcca 655
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>gb|AF077615.1|AF077615 Homo sapiens TGF beta inducible nuclear protein TINP1 (TINP1) mRNA,
           complete cds
          Length = 1105

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 636 acatcctgaactgaaagcca 655
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>gb|AC092641.2| Homo sapiens BAC clone RP11-389F18 from 2, complete sequence
          Length = 219175

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    acatcctgaactgaaagcca 83
             ||||||||||||||||||||
Sbjct: 48054 acatcctgaactgaaagcca 48073
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>emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chromosome 2, complete
             sequence
          Length = 159731

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    tgtccatttacatcctgaac 74
             ||||||||||||||||||||
Sbjct: 45508 tgtccatttacatcctgaac 45527
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>emb|AJ012409.1|HSA012409 Homo sapiens mRNA for hypothetical protein, clone YR-29
          Length = 1024

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 634 acatcctgaactgaaagcca 653
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>emb|CR974440.6| Zebrafish DNA sequence from clone CH73-78M16 in linkage group 22,
              complete sequence
          Length = 123466

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     gctacttcaaaacaactcca 109
              ||||||||||||||||||||
Sbjct: 103726 gctacttcaaaacaactcca 103745
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>gb|AY443419.1| Homo sapiens TGF-beta inducible nuclear protein (CDK105) mRNA,
           complete cds
          Length = 783

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  acatcctgaactgaaagcca 83
           ||||||||||||||||||||
Sbjct: 552 acatcctgaactgaaagcca 571


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,810,242
Number of Sequences: 3902068
Number of extensions: 4810242
Number of successful extensions: 96791
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96692
Number of HSP's gapped (non-prelim): 97
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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