| Clone Name | rbags24j05 |
|---|---|
| Clone Library Name | barley_pub |
>RL44_ARATH (O23290) 60S ribosomal protein L44| Length = 104 Score = 162 bits (409), Expect = 7e-40 Identities = 79/104 (75%), Positives = 83/104 (79%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VN+P KHTLHKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFH Sbjct: 1 VNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSLF 188 KIVL+LQCQSCKH+SQR IKRCKHFEIGGDKKGKGTSLF Sbjct: 61 AKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 104
>RL44_GOSHI (Q96499) 60S ribosomal protein L44| Length = 104 Score = 157 bits (398), Expect = 1e-38 Identities = 78/104 (75%), Positives = 80/104 (76%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VNVP KHTLHKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFH Sbjct: 1 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSLF 188 KIVL+LQCQ CKH SQ IKRCKHFEIGGDKKGKGTSLF Sbjct: 61 AKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 104
>RL44_CRYNE (Q9HF88) 60S ribosomal protein L44 (60S ribosomal protein L41)| Length = 105 Score = 134 bits (337), Expect = 2e-31 Identities = 65/103 (63%), Positives = 74/103 (71%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VN+P KHT HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH Sbjct: 1 VNIPKTRRTYCKGKACRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 K+VL+L+C CK Q A+KRCKHFE+GGDKK +G ++ Sbjct: 61 AKTTKKVVLRLECTVCKTKHQLALKRCKHFELGGDKKQRGAAI 103
>RL44_PHARH (O59870) 60S ribosomal protein L44 (60S ribosomal protein L41)| Length = 105 Score = 133 bits (335), Expect = 3e-31 Identities = 64/103 (62%), Positives = 73/103 (70%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VNVP KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFH Sbjct: 1 VNVPKTRRTYCKGKACKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 K+VL+L+C CK+ Q +KRCKHFE+GGDKK KG ++ Sbjct: 61 AKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKGAAI 103
>RL44_COPCI (Q9UWE4) 60S ribosomal protein L44 (60S ribosomal protein L41)| Length = 105 Score = 131 bits (330), Expect = 1e-30 Identities = 63/103 (61%), Positives = 74/103 (71%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VN+P KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFH Sbjct: 1 VNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 K+VL+L+C CK+ Q ++KRCKHFE+GG+KK KG +L Sbjct: 61 AKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAAL 103
>RL44_PICJA (P52809) 60S ribosomal protein L44 (60S ribosomal protein L41)| Length = 105 Score = 129 bits (323), Expect = 6e-30 Identities = 65/103 (63%), Positives = 72/103 (69%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VNVP KHT HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH Sbjct: 1 VNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 K+VL+L+C CK +Q A+KRCKHFE+GGDKK KG +L Sbjct: 61 AKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKGQAL 103
>RL44_SCHPO (Q9UTI8) 60S ribosomal protein L44| Length = 105 Score = 127 bits (319), Expect = 2e-29 Identities = 60/103 (58%), Positives = 74/103 (71%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VN+P KHT+H+VTQYKKG DS AQGKRRYDRKQSG+GGQTKPVFH Sbjct: 1 VNIPKTRKTYCPGKNCRKHTVHRVTQYKKGPDSKLAQGKRRYDRKQSGFGGQTKPVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 K+VL+L+C SCK+ +Q +KRCKHFE+GG+KK KG ++ Sbjct: 61 AKVTKKVVLRLECVSCKYKNQLVLKRCKHFELGGEKKTKGAAI 103
>RL44_PICCI (Q9UVB8) 60S ribosomal protein L44 (60S ribosomal protein L41)| Length = 105 Score = 126 bits (317), Expect = 3e-29 Identities = 63/103 (61%), Positives = 72/103 (69%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VNVP KHT HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH Sbjct: 1 VNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 K+VL+L+C CK +Q ++KRCKHFE+GGD+K KG +L Sbjct: 61 AKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDRKQKGQAL 103
>RL44P_CANMA (Q00477) 60S ribosomal protein L44 P (L41) (L41 P-type)| Length = 105 Score = 126 bits (317), Expect = 3e-29 Identities = 63/103 (61%), Positives = 72/103 (69%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VNVP KH+ HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH Sbjct: 1 VNVPKTRKTYCKGRECRKHSQHKVTQYKAGKSSLFAQGKRRYDRKQSGFGGQTKPVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 K+VL+L+C CK +Q A+KRCKHFE+GGDKK KG +L Sbjct: 61 AKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKGQAL 103
>RL44_YEAST (P02405) 60S ribosomal protein L42 (L44) (YL27) (YP44) (L41)| (Maintenance of killer protein 18) Length = 105 Score = 125 bits (314), Expect = 7e-29 Identities = 62/103 (60%), Positives = 71/103 (68%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VNVP KHT HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH Sbjct: 1 VNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 K+VL+L+C CK +Q +KRCKHFE+GG+KK KG +L Sbjct: 61 AKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQAL 103
>RL44_PICGU (P31866) 60S ribosomal protein L44 (60S ribosomal protein L41)| Length = 102 Score = 124 bits (312), Expect = 1e-28 Identities = 62/100 (62%), Positives = 70/100 (70%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VNVP KHT HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH Sbjct: 1 VNVPKTRRTYCKGKDCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKG 200 K+VL+L+C CK +Q ++KRCKHFE+GGDKK KG Sbjct: 61 AKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKG 100
>RL44_KLUMA (P27076) 60S ribosomal protein L44 (60S ribosomal protein L41)| Length = 105 Score = 124 bits (311), Expect = 2e-28 Identities = 61/103 (59%), Positives = 72/103 (69%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VNVP KH+ HKVTQYK GK SL AQGKRRYDRKQSG+GGQTK +FH Sbjct: 1 VNVPKTRKTYCKGKACRKHSQHKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 K+VL+L+C SCK +Q A+KRCKHFE+GG+KK KG +L Sbjct: 61 AKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGEKKQKGQAL 103
>RL44_KLULA (P31027) 60S ribosomal protein L44 (60S ribosomal protein L41)| Length = 105 Score = 123 bits (309), Expect = 3e-28 Identities = 61/103 (59%), Positives = 71/103 (68%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VNVP KH HKVTQYK GK SL AQGKRRYDRKQSG+GGQTK +FH Sbjct: 1 VNVPKTRKTYCKGKECRKHAQHKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 K+VL+L+C SCK +Q A+KRCKHFE+GG+KK KG +L Sbjct: 61 AKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGEKKQKGQAL 103
>RL44_DEBOC (P31028) 60S ribosomal protein L44 (L41)| Length = 105 Score = 123 bits (309), Expect = 3e-28 Identities = 62/103 (60%), Positives = 70/103 (67%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VNVP KHT HKVTQYK GK SL AQGKRRYDRKQ GYGGQTK +FH Sbjct: 1 VNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQRGYGGQTKQIFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 K+VLKL+C CK +Q ++KRCKHFE+GGDKK KG +L Sbjct: 61 AKTTKKVVLKLECVVCKTKAQLSLKRCKHFELGGDKKQKGQAL 103
>RL44Q_CANMA (P27074) 60S ribosomal protein L44 Q (L41) (L41 Q-type)| Length = 105 Score = 122 bits (305), Expect = 8e-28 Identities = 61/103 (59%), Positives = 69/103 (66%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VN+P KHT+HKVTQYK G+ SL AQGKRRYDRKQSGYGGQTK VFH Sbjct: 1 VNIPKTRNTYCKGKGCRKHTIHKVTQYKSGRASLFAQGKRRYDRKQSGYGGQTKQVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 KIVLKL+C CK Q +KRCKH E+GG+KK KG +L Sbjct: 61 AKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQAL 103
>RL44_CANTR (P27075) 60S ribosomal protein L44 (60S ribosomal protein L41)| Length = 105 Score = 121 bits (304), Expect = 1e-27 Identities = 61/103 (59%), Positives = 69/103 (66%) Frame = -3 Query: 499 VNVPXXXXXXXXXXXXXKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 320 VN+P KHT+HKVTQYK G+ SL AQGKRRYDRKQSGYGGQTK VFH Sbjct: 1 VNIPKTRNTYCKGKGCRKHTIHKVTQYKAGRASLFAQGKRRYDRKQSGYGGQTKQVFHKK 60 Query: 319 XXXXXKIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 191 KIVLKL+C CK Q +KRCKH E+GG+KK KG +L Sbjct: 61 AKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQAL 103
>RL44_CAEEL (P48166) 60S ribosomal protein L44 (L41)| Length = 104 Score = 120 bits (300), Expect = 3e-27 Identities = 54/82 (65%), Positives = 63/82 (76%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKH 266 HT HKVTQYKKGK+S AQG+RRYDRKQSG+GGQTKP+F KIVL+++C CKH Sbjct: 18 HTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKH 77 Query: 265 YSQRAIKRCKHFEIGGDKKGKG 200 Q IKRCKHFE+GG KK +G Sbjct: 78 KKQLPIKRCKHFELGGQKKSRG 99
>RL44_CHLRE (P49213) 60S ribosomal protein L44 (L41)| Length = 98 Score = 119 bits (299), Expect = 4e-27 Identities = 56/79 (70%), Positives = 61/79 (77%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKH 266 H + KVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH KIVL++QCQ CK Sbjct: 17 HMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRMQCQECKQ 76 Query: 265 YSQRAIKRCKHFEIGGDKK 209 + +KRCKHFEIGGDKK Sbjct: 77 TCMKGLKRCKHFEIGGDKK 95
>RL36A_RAT (P83883) 60S ribosomal protein L36a (60S ribosomal protein L44)| Length = 105 Score = 118 bits (295), Expect = 1e-26 Identities = 58/84 (69%), Positives = 64/84 (76%), Gaps = 2/84 (2%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSC 272 H HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KIVL+L+C +C Sbjct: 17 HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76 Query: 271 KHYSQRAIKRCKHFEIGGDKKGKG 200 + AIKRCKHFE+GGDKK KG Sbjct: 77 RSKRMLAIKRCKHFELGGDKKRKG 100
>RL36A_PIG (P83884) 60S ribosomal protein L36a (60S ribosomal protein L44)| Length = 105 Score = 118 bits (295), Expect = 1e-26 Identities = 58/84 (69%), Positives = 64/84 (76%), Gaps = 2/84 (2%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSC 272 H HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KIVL+L+C +C Sbjct: 17 HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76 Query: 271 KHYSQRAIKRCKHFEIGGDKKGKG 200 + AIKRCKHFE+GGDKK KG Sbjct: 77 RSKRMLAIKRCKHFELGGDKKRKG 100
>RL36A_MOUSE (P83882) 60S ribosomal protein L36a (60S ribosomal protein L44)| Length = 105 Score = 118 bits (295), Expect = 1e-26 Identities = 58/84 (69%), Positives = 64/84 (76%), Gaps = 2/84 (2%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSC 272 H HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KIVL+L+C +C Sbjct: 17 HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76 Query: 271 KHYSQRAIKRCKHFEIGGDKKGKG 200 + AIKRCKHFE+GGDKK KG Sbjct: 77 RSKRMLAIKRCKHFELGGDKKRKG 100
>RL36A_ICTPU (P61487) 60S ribosomal protein L36a| Length = 105 Score = 118 bits (295), Expect = 1e-26 Identities = 58/84 (69%), Positives = 64/84 (76%), Gaps = 2/84 (2%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSC 272 H HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KIVL+L+C +C Sbjct: 17 HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76 Query: 271 KHYSQRAIKRCKHFEIGGDKKGKG 200 + AIKRCKHFE+GGDKK KG Sbjct: 77 RSKRMLAIKRCKHFELGGDKKRKG 100
>RL36A_HUMAN (P83881) 60S ribosomal protein L36a (60S ribosomal protein L44)| (Migration-inducing gene 6 protein) Length = 105 Score = 118 bits (295), Expect = 1e-26 Identities = 58/84 (69%), Positives = 64/84 (76%), Gaps = 2/84 (2%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSC 272 H HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KIVL+L+C +C Sbjct: 17 HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76 Query: 271 KHYSQRAIKRCKHFEIGGDKKGKG 200 + AIKRCKHFE+GGDKK KG Sbjct: 77 RSKRMLAIKRCKHFELGGDKKRKG 100
>RL36A_FUGRU (P61486) 60S ribosomal protein L36a (60S ribosomal protein L44)| Length = 105 Score = 118 bits (295), Expect = 1e-26 Identities = 58/84 (69%), Positives = 64/84 (76%), Gaps = 2/84 (2%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSC 272 H HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KIVL+L+C +C Sbjct: 17 HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76 Query: 271 KHYSQRAIKRCKHFEIGGDKKGKG 200 + AIKRCKHFE+GGDKK KG Sbjct: 77 RSKRMLAIKRCKHFELGGDKKRKG 100
>RL36A_BRARE (P61485) 60S ribosomal protein L36a| Length = 105 Score = 118 bits (295), Expect = 1e-26 Identities = 58/84 (69%), Positives = 64/84 (76%), Gaps = 2/84 (2%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSC 272 H HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KIVL+L+C +C Sbjct: 17 HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76 Query: 271 KHYSQRAIKRCKHFEIGGDKKGKG 200 + AIKRCKHFE+GGDKK KG Sbjct: 77 RSKRMLAIKRCKHFELGGDKKRKG 100
>RL44_BRUMA (P90702) 60S ribosomal protein L44| Length = 104 Score = 117 bits (293), Expect = 2e-26 Identities = 52/82 (63%), Positives = 62/82 (75%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKH 266 HT+HKVTQYKKGK+S AQG+RRYD KQ G+GGQTKP+F KIVL+++C CKH Sbjct: 18 HTMHKVTQYKKGKESRLAQGRRRYDSKQKGFGGQTKPIFRKKAKTTKKIVLRMECTECKH 77 Query: 265 YSQRAIKRCKHFEIGGDKKGKG 200 Q IKRCKHFE+GG KK +G Sbjct: 78 RKQLPIKRCKHFELGGQKKTRG 99
>RL36L_HUMAN (Q969Q0) 60S ribosomal protein L36a-like| Length = 105 Score = 117 bits (292), Expect = 3e-26 Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSC 272 H HKVTQYKKGKDSL AQG+RRYDRKQSGYGGQTKP+F KIVL+L+C +C Sbjct: 17 HQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76 Query: 271 KHYSQRAIKRCKHFEIGGDKKGKG 200 + AIKRCKHFE+GGDKK KG Sbjct: 77 RSKRMLAIKRCKHFELGGDKKRKG 100
>RL36L_PONPY (Q5R9D2) 60S ribosomal protein L36a-like| Length = 105 Score = 115 bits (288), Expect = 7e-26 Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQC--QSC 272 H HKVTQYKKGKDSL AQG+RRYDRK+SGYGGQTKP+F KIVL+L+C +C Sbjct: 17 HQPHKVTQYKKGKDSLYAQGRRRYDRKRSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76 Query: 271 KHYSQRAIKRCKHFEIGGDKKGKG 200 + AIKRCKHFE+GGDKK KG Sbjct: 77 RSKRMLAIKRCKHFELGGDKKRKG 100
>RL44_AEDTR (Q9NB33) 60S ribosomal protein L44| Length = 103 Score = 113 bits (282), Expect = 4e-25 Identities = 49/82 (59%), Positives = 62/82 (75%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKH 266 H +HKVTQYKK K+ ++QG+RRYDRKQ G+GGQTKP+F KIVL+++C CK+ Sbjct: 17 HRVHKVTQYKKSKERKASQGRRRYDRKQKGFGGQTKPIFRKKAKTTKKIVLRMECVDCKY 76 Query: 265 YSQRAIKRCKHFEIGGDKKGKG 200 Q +KRCKHFE+GGDKK KG Sbjct: 77 RKQTPLKRCKHFELGGDKKRKG 98
>RL44_PLAF7 (O97231) 60S ribosomal protein L44| Length = 103 Score = 108 bits (269), Expect = 1e-23 Identities = 50/86 (58%), Positives = 63/86 (73%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKH 266 HT+HKV+QYKKGK+ LS+ G+RRYD KQ G+GGQTKPVF KIVLKL+C CK Sbjct: 18 HTMHKVSQYKKGKERLSSLGRRRYDMKQKGFGGQTKPVFKKKAKTTKKIVLKLECTKCKK 77 Query: 265 YSQRAIKRCKHFEIGGDKKGKGTSLF 188 + +KRCK FE+G DKK KG +++ Sbjct: 78 KRFQTMKRCKTFEMGADKKKKGGAVY 103
>RL44_TRYBB (P17843) 60S ribosomal protein L44| Length = 105 Score = 101 bits (252), Expect = 1e-21 Identities = 49/79 (62%), Positives = 54/79 (68%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKH 266 H KV QYK GK L A+GKRRYDRKQSGYGGQTKP+FH KIVLKLQC +CK Sbjct: 19 HKSFKVVQYKAGKARLYARGKRRYDRKQSGYGGQTKPIFHKKAKTTKKIVLKLQCSNCKS 78 Query: 265 YSQRAIKRCKHFEIGGDKK 209 Q +KR KHFE+ KK Sbjct: 79 IIQNVLKRTKHFELNDKKK 97
>RL44_THEAC (Q9HIX1) 50S ribosomal protein L44E| Length = 93 Score = 48.5 bits (114), Expect = 1e-05 Identities = 28/74 (37%), Positives = 35/74 (47%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSCKH 266 HT H V + +K K S G+RR+ R SGYGG +P F +I L+L C C Sbjct: 17 HTSHSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDECHK 76 Query: 265 YSQRAIKRCKHFEI 224 R K FEI Sbjct: 77 AITPPGIRAKKFEI 90
>RL44_PYRFU (Q8U475) 50S ribosomal protein L44E| Length = 94 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC-K 269 HT+HKV + KK S + G+RR+ R GYGG +P K+ L+ +C C K Sbjct: 17 HTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREKPVKKLDLRFRCTECGK 76 Query: 268 HYSQRAIKRCKHFEI 224 +++ R K FE+ Sbjct: 77 AHTRGRGFRVKKFEL 91
>RL44_PYRAB (Q9UXZ2) 50S ribosomal protein L44E| Length = 94 Score = 41.2 bits (95), Expect = 0.002 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC-K 269 HT+HKV + KK S + G+RR+ R GYGG +P K+ L+ +C C K Sbjct: 17 HTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREKPVKKLDLRFRCTVCGK 76 Query: 268 HYSQRAIKRCKHFEI 224 +++ R K FE+ Sbjct: 77 AHTRGRGFRVKKFEL 91
>RL44_METJA (P54027) 50S ribosomal protein L44E| Length = 94 Score = 39.3 bits (90), Expect = 0.007 Identities = 22/58 (37%), Positives = 32/58 (55%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC 272 HT+H V + KKGK S G+R++ R +GYGG +P+ KI L+ +C C Sbjct: 17 HTIHIVEKAKKGKPSELTWGQRQFRRVTAGYGGFPRPL-PDRSKPVKKIDLRFKCTEC 73
>RL44_PYRHO (O59603) 50S ribosomal protein L44E| Length = 94 Score = 38.5 bits (88), Expect = 0.011 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC-K 269 HT+HKV + K+ S + G+RR+ R GYGG +P K+ L+ C C + Sbjct: 17 HTIHKVERVKRRPRSELSAGQRRFRRVLKGYGGFPRPKPEGREKPVKKLDLRFVCTVCGR 76 Query: 268 HYSQRAIKRCKHFEI 224 +++ R K FE+ Sbjct: 77 AHTRGKGFRVKRFEL 91
>RL44_METTH (O27365) 50S ribosomal protein L44E| Length = 92 Score = 35.0 bits (79), Expect = 0.12 Identities = 19/58 (32%), Positives = 33/58 (56%) Frame = -3 Query: 445 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC 272 HT+H+V + K+ K S G+R++ R +GY G +P+ K+ L+L+C+ C Sbjct: 17 HTVHEVLESKRRKASELKWGQRQFRRVTAGYRGYPRPL-PSGNKPVKKLDLRLKCKEC 73
>RL44_AERPE (Q9YF00) 50S ribosomal protein L44E| Length = 63 Score = 34.7 bits (78), Expect = 0.16 Identities = 18/41 (43%), Positives = 21/41 (51%) Frame = -3 Query: 394 AQGKRRYDRKQSGYGGQTKPVFHXXXXXXXKIVLKLQCQSC 272 A G+RRY RKQ GYG Q +P K VL + C C Sbjct: 2 ALGERRYRRKQEGYGSQRRPEQKRFAKVTKKQVLVITCTVC 42
>RL44_ARCFU (O28936) 50S ribosomal protein L44E| Length = 93 Score = 32.3 bits (72), Expect = 0.81 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 8/82 (9%) Frame = -3 Query: 445 HTLHKVTQYKKGKDS----LSAQGKRRYD----RKQSGYGGQTKPVFHXXXXXXXKIVLK 290 HTLH+V + KGK S ++ Q KRR K S G KP ++ ++ Sbjct: 17 HTLHEVERVSKGKASSLNWINRQKKRRGKVGNLGKFSKVPGGDKP--------TKRVNIR 68 Query: 289 LQCQSCKHYSQRAIKRCKHFEI 224 +C CK R R K FE+ Sbjct: 69 FRCTECKKAHHRPTWRAKRFEL 90
>VE2_HPV05 (P06921) Regulatory protein E2| Length = 514 Score = 30.8 bits (68), Expect = 2.4 Identities = 31/97 (31%), Positives = 41/97 (42%) Frame = -1 Query: 489 RRPRRPTAKTRSARSTHFTRSLSTKRVRTVCLPRENVVMTGSSRDMVVRPSLSSTRRQKP 310 R R +++RS TH TR ST R R+ L + +T SR P+ + Sbjct: 271 RHRSRSRSRSRSKSQTHTTR--STTRSRSTSLTKTR-ALTSRSRSRGRSPTTCRRGGGRS 327 Query: 309 PRRLC*SCSARAASTTPSVPSRDASILRSVETRRARG 199 PRR S S ++ TT A S TR ARG Sbjct: 328 PRRRSRSPSTSSSCTTQRSQRARA---ESSTTRGARG 361
>RSNL2_RAT (Q66HD5) Restin-like protein 2| Length = 599 Score = 30.4 bits (67), Expect = 3.1 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%) Frame = -1 Query: 471 TAKTRSARSTHFTRSLSTKRVRTVCLPRENVVMTGSSRDMVVRPSLSST-------RRQK 313 T+K S T + S T+ LPR + T + D +SS+ +Q Sbjct: 382 TSKVNSGLMTSKKENASES---TLSLPRSEELKTVAKNDATQPGCISSSSSTSSLDHKQS 438 Query: 312 PPRRLC*SCSA--RAASTTPSVPSRDASILRSVETRRA 205 P++L S S+ + S +PS+PSR ++ L+S T A Sbjct: 439 HPKKLSTSSSSGKKTLSKSPSLPSRASAGLKSSTTSAA 476
>NKTR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer cells| cyclophilin-related protein) (NK-TR protein) Length = 1462 Score = 30.0 bits (66), Expect = 4.0 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 6/122 (4%) Frame = -1 Query: 519 SPRPSKW*TFRRPRRPT---AKTRSARSTHFTRSLSTKRVRTVCLPRENVVMTGSSRDMV 349 SP PS+W ++P +P+ + A++TH ST + N+ TGSS Sbjct: 613 SPPPSRWKPGQKPWKPSYERIQEMKAKTTHLLPIQSTYSL-------ANIKETGSSSSYH 665 Query: 348 VRPSLSSTRRQKPPRRLC*SCSARAASTTP---SVPSRDASILRSVETRRARGHLFSKLR 178 R S + + + S R++ ++P S SR S RS R+ S+ R Sbjct: 666 KREKNSESDQSTYSK-----YSDRSSESSPRSRSRSSRSRSYSRSYTRSRSLASSHSRSR 720 Query: 177 SP 172 SP Sbjct: 721 SP 722
>ADA21_HUMAN (Q9UKJ8) ADAM 21 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 21) Length = 722 Score = 29.6 bits (65), Expect = 5.3 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -2 Query: 359 GIWWSDQA-CLPQEGKNHQEDCAEAAVPELQALLPACHQEMQAF*DRWRQEGQGDISFLN 183 GI SD A C + NH + C E + ++ C++E+ + +R+ G ++L Sbjct: 493 GIPCSDSAYCYQKRCNNHDQHCREIFGKDAKSASQNCYKEINSQGNRFGHCGINGTTYLK 552 Query: 182 CAHLSGV 162 C H+S V Sbjct: 553 C-HISDV 558
>KSR2_HUMAN (Q6VAB6) Kinase suppressor of ras-2 (hKSR2)| Length = 829 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -3 Query: 166 EWWWSRTSTTCVKGLLLGAKLIRPCHVSKLLC 71 ++W S+T T C KG+L G K C KL C Sbjct: 297 KYWMSQTCTVCGKGMLFGLK----CKNCKLKC 324
>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2014 Score = 29.3 bits (64), Expect = 6.9 Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 7/107 (6%) Frame = -1 Query: 483 PRRPTAKTRSARSTHFTRSLSTKRVRTVCLPRENVVMTGSSRDMVVRPSLSSTRRQKPPR 304 PR P A+ + R+ RS RT C R+N + +R + ++ PR Sbjct: 440 PRTPCAQRDNPRAASPNRSTQRDSPRTPCAQRDNPRASSPNRTAQRDNPRTPCAQRDNPR 499 Query: 303 RLC*SCSARAASTTPSVPSRDASI-------LRSVETRRARGHLFSK 184 SC+++ TPS + + LRS T+R FS+ Sbjct: 500 T---SCTSQNTPRTPSTQADKTTASCSKWEHLRSACTQRDNPRTFSQ 543
>RSNL2_MOUSE (Q8CI96) Restin-like protein 2| Length = 704 Score = 29.3 bits (64), Expect = 6.9 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 17/107 (15%) Frame = -1 Query: 474 PTAKTRSARSTHFTRSLS---------TKRVRTVCLPRENVVMTGSSRDMVVRPSLSST- 325 P A+++ HFT ++ T T+ LP T + D S+SS+ Sbjct: 369 PHARSQKVDVAHFTSRVNSGLTTSKKETASESTLTLPPSEEPKTVAENDAAQPGSMSSSS 428 Query: 324 ------RRQKPPRRLC*SCSARAA-STTPSVPSRDASILRSVETRRA 205 +Q P++L S + S +PS+PSR ++ L+S T A Sbjct: 429 SSSSLDHKQSYPKKLTTSSGGKKTLSKSPSLPSRASAGLKSSATSAA 475
>VL96_IRV1 (P22856) L96 protein| Length = 867 Score = 29.3 bits (64), Expect = 6.9 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 10/96 (10%) Frame = -1 Query: 489 RRPRR-PTAKTRSARSTHFTRSLSTK-RVRTVCLPRENVVMTGSSRDMVVRPSLSSTR-- 322 + PRR P A R +R+ +S S + R ++ + E G + VRP S R Sbjct: 427 KSPRRSPPASVRRSRTPSVPKSPSARPRSKSPSVRAEITDDEGETPPSSVRPKSPSVRPK 486 Query: 321 ------RQKPPRRLC*SCSARAASTTPSVPSRDASI 232 R K P S SAR S +PSV S+ S+ Sbjct: 487 SPSVRPRSKSPSVRPKSPSARPRSKSPSVRSKSPSV 522
>VE7_BPV6 (Q705F5) Protein E7| Length = 99 Score = 29.3 bits (64), Expect = 6.9 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = +1 Query: 370 CHNDVFPGQTDCPYPFCTE*PCEVC 444 C ++ + DCP PF E C VC Sbjct: 26 CEEEIETEEVDCPAPFAVEAVCHVC 50
>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2365 Score = 28.9 bits (63), Expect = 9.0 Identities = 24/93 (25%), Positives = 36/93 (38%) Frame = -1 Query: 483 PRRPTAKTRSARSTHFTRSLSTKRVRTVCLPRENVVMTGSSRDMVVRPSLSSTRRQKPPR 304 PR A+ + R++ R++ RT C R+N + +R + +S RQ PR Sbjct: 720 PRTSCARRDNPRASSRNRTIQRDNPRTSCAQRDNPRASSPNRTIQQENLRTSCTRQDNPR 779 Query: 303 RLC*SCSARAASTTPSVPSRDASILRSVETRRA 205 S RA P LR+ RA Sbjct: 780 T---SSPNRATRDNPRTSCAQRDNLRASSPIRA 809 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,155,445 Number of Sequences: 219361 Number of extensions: 1364551 Number of successful extensions: 3494 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3382 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3479 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)