>gb|U83414.1|HVU83414 Hordeum vulgare cytosolic triosephosphate isomerase mRNA, complete
            cds
          Length = 1028

 Score =  307 bits (155), Expect = 7e-81
 Identities = 192/205 (93%), Gaps = 2/205 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    taaacattatncattattggcttgcatgcaagtacaggggggaggaaacgacacggtagc 60
            |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1006 taaacattat-cattattggcttgcatgcaagt-caggggggaggaaacgacacggtagc 949

                                                                        
Query: 61   agctgctccaccacaaaattactagcatagtacacataataaacataaacacaggagnnn 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 948  agctgctccaccacaaaattactagcatagtacacataataaacataaacacaggagaaa 889

                                                                        
Query: 121  nnnnggagtctctcttcatcttcgccagcttnctccacgccgagaggagccacgtngaga 180
                ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 888  aaaaggagtctctcttcatcttcgccagcttcctccacgccgagaggagccacgtcgaga 829

                                     
Query: 181  tttttcttangcggacttcacggcg 205
            ||| ||||| |||||||||||||||
Sbjct: 828  tttctcttaggcggacttcacggcg 804

>emb|Z26875.1|SCTRPIS S.cereale tpi gene for triosephosphate isomerase
          Length = 1033

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                           
Query: 51  acacggtagcagctgctccaccacaaaattactagcatagtacacata 98
           |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 acacagtagcagctgctccaccacaaaattactagcatagtacacata 903



 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 133 tcttcatcttcgccagcttnctccacgccgagaggagccacgtngagattttt 185
           |||||||||||||   ||| ||||||||||||||||||||| | |||||||||
Sbjct: 873 tcttcatcttcgctgtcttcctccacgccgagaggagccacatcgagattttt 821

>emb|Z15118.1|KTTBMAXVR T.brucei kinetoplast maxicircle variable region DNA
          Length = 7395

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 91   tacacataataaacataaaca 111
            |||||||||||||||||||||
Sbjct: 7347 tacacataataaacataaaca 7327

>gb|M18978.1|TRBKPVR T.brucei kinetoplast maxicircle DNA, variable region R3-D3
          Length = 1335

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 91   tacacataataaacataaaca 111
            |||||||||||||||||||||
Sbjct: 1313 tacacataataaacataaaca 1293

>gb|M94286.1|TRBKPGEN Trypanosoma brucei brucei kinetoplast maxicircle genes, putative cds
          Length = 23016

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 91   tacacataataaacataaaca 111
            |||||||||||||||||||||
Sbjct: 1315 tacacataataaacataaaca 1295

>gb|AC159376.12| Mus musculus 10 BAC RP23-114N21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 223292

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 89     agtacacataataaacataaacac 112
              |||| |||||||||||||||||||
Sbjct: 152971 agtaaacataataaacataaacac 152948

>gb|AC102931.10| Mus musculus chromosome 7, clone RP24-221B5, complete sequence
          Length = 164298

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    acacataataaacataaacacagg 115
             |||||||||||||||||| |||||
Sbjct: 59095 acacataataaacataaagacagg 59072

>gb|AC111044.9| Mus musculus chromosome 10, clone RP23-299H4, complete sequence
          Length = 165614

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    agtacacataataaacataaacac 112
             |||| |||||||||||||||||||
Sbjct: 44116 agtaaacataataaacataaacac 44093

>emb|AL391383.15| Human DNA sequence from clone RP11-532O21 on chromosome 13 Contains the
             5' of the gene for transcription factor (p38 interacting
             protein) (P38IP) (tumor rejection antigen), the gene for a
             novel protein similar to casein kinase I alpha 1 CSNK1A1
             and a CpG island, complete sequence
          Length = 98921

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    ataataaacataaacacagg 115
             ||||||||||||||||||||
Sbjct: 61901 ataataaacataaacacagg 61920

>gb|AC158575.3| Mus musculus chromosome 7, clone RP23-275H16, complete sequence
          Length = 221489

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     acacataataaacataaacacagg 115
              |||||||||||||||||| |||||
Sbjct: 204597 acacataataaacataaagacagg 204620

>emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in linkage group 4 Contains
             the gene for a novel protein (zgc:63880), the 3' end of
             the gene for a novel protein similar to vertebrate KCND2,
             the 5' end of the ing3 gene for inhibitor of growth family
             member 3 and a CpG island, complete sequence
          Length = 200582

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    aataaacataaacacaggag 117
             ||||||||||||||||||||
Sbjct: 30639 aataaacataaacacaggag 30620

>emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, complete sequence
          Length = 116326

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  acacataataaacataaaca 111
           ||||||||||||||||||||
Sbjct: 384 acacataataaacataaaca 365

>emb|BX936428.10| Zebrafish DNA sequence from clone RP71-19F19 in linkage group 5, complete
              sequence
          Length = 188618

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     acataataaacataaacaca 113
              ||||||||||||||||||||
Sbjct: 177233 acataataaacataaacaca 177252

>emb|BX649392.6| Zebrafish DNA sequence from clone DKEY-84J12 in linkage group 5,
             complete sequence
          Length = 197352

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    acataataaacataaacaca 113
             ||||||||||||||||||||
Sbjct: 76337 acataataaacataaacaca 76318

>emb|BX323798.6| Zebrafish DNA sequence from clone CH211-225G5, complete sequence
          Length = 81343

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    acacataataaacataaaca 111
             ||||||||||||||||||||
Sbjct: 79727 acacataataaacataaaca 79708

>emb|BX000480.6| Zebrafish DNA sequence from clone DKEY-14C5 in linkage group 17,
             complete sequence
          Length = 191781

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    agtacacataataaacataa 108
             ||||||||||||||||||||
Sbjct: 40602 agtacacataataaacataa 40621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,515,727
Number of Sequences: 3902068
Number of extensions: 1515727
Number of successful extensions: 109684
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109641
Number of HSP's gapped (non-prelim): 41
length of query: 205
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 183
effective length of database: 17,147,199,772
effective search space: 3137937558276
effective search space used: 3137937558276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)