>KRA31_HUMAN (Q9BYR8) Keratin-associated protein 3-1 (Keratin-associated protein|
           3.1) (High sulfur keratin-associated protein 3.1)
          Length = 98

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 148 CIFEWFVPTCWLCSHCRPLP 207
           C  + +VPTCWL ++C P P
Sbjct: 56  CKPDTYVPTCWLLNNCHPTP 75

>FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.75) (Furin-2)|
          Length = 1679

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -2

Query: 170 GTNHSNMQLYQEILSGAPFVRTNSVLFPFPF*SVSNL 60
           GT+   M+L  E+L+ +P +R+ S   PF F S SN+
Sbjct: 848 GTSTQPMRLKSELLNSSPQLRSPSSSNPFLFPSASNI 884

>GLMU_ENTFA (Q839U1) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 458

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
 Frame = -2

Query: 338 KASRYRSTVWKVCNKRPGYNASDSDSDDVKETAK*WIFPSYGIVGRGLQ*---------- 189
           K +R +S ++KV +   G    +   D V++T    I     IVG G +           
Sbjct: 13  KGTRMKSKLYKVLHPVAGKPMVEHILDQVEQTEPTEIVT---IVGHGAEMIKSHLGERSQ 69

Query: 188 --LQSQQVGTNHSNMQLYQEILSG 123
             LQ++Q+GT H+ MQ  QE+L G
Sbjct: 70  YALQAEQLGTGHAVMQA-QELLGG 92

>FBN1_MOUSE (Q61554) Fibrillin-1 precursor|
          Length = 2871

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -1

Query: 210  CWQGPAVTTKPASGHKPFKYAAVSGNIIWGPICSHKQCSVSVSFLKC 70
            C +GP   TK  +  KPF +  ++   +   +C+H +C  ++   KC
Sbjct: 1008 CPRGPGFATKDITNGKPF-FKDINECKMIPSLCTHGKCRNTIGSFKC 1053

>FBN1_HUMAN (P35555) Fibrillin-1 precursor|
          Length = 2871

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -1

Query: 210  CWQGPAVTTKPASGHKPFKYAAVSGNIIWGPICSHKQCSVSVSFLKC 70
            C +GP   TK  +  KPF +  ++   +   +C+H +C  ++   KC
Sbjct: 1008 CPRGPGFATKEITNGKPF-FKDINECKMIPSLCTHGKCRNTIGSFKC 1053

>HRP_PLABE (Q08168) 58 kDa phosphoprotein (Heat shock-related protein) (HRP)|
          Length = 423

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = -2

Query: 383 YGVNKNEHKSRIWMXK-------ASRYRSTVWKVCNKRPGYNASDSDS 261
           Y +NK E K R+   K       A +    ++K  NKR  Y++  SDS
Sbjct: 236 YKINKEEEKQRLKREKELKKKLAAKKKAEKMYKENNKRENYDSDSSDS 283

>FBN1_PIG (Q9TV36) Fibrillin-1 precursor|
          Length = 2871

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -1

Query: 210  CWQGPAVTTKPASGHKPFKYAAVSGNIIWGPICSHKQCSVSVSFLKC 70
            C +GP   TK  +  KPF +  ++   +   +C+H +C  ++   KC
Sbjct: 1008 CPRGPGFATKEITNGKPF-FKDINECKMIPNLCTHGKCRNTIGSFKC 1053

>YKH5_CAEEL (P34273) Hypothetical protein C02C2.5 in chromosome III|
          Length = 344

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 249 GNSQIMDISELWDCWQGPAVTTKP 178
           G S ++D+S+L D W+ P +T  P
Sbjct: 221 GASWVVDVSQLQDTWRRPYITDAP 244

>EDG3_MOUSE (Q9Z0U9) Sphingosine 1-phosphate receptor Edg-3 (S1P receptor|
           Edg-3) (Endothelial differentiation G-protein coupled
           receptor 3) (Sphingosine 1-phosphate receptor 3) (S1P3)
           (Lysophospholipid receptor B3)
          Length = 378

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +3

Query: 222 RKYPLFG-CFLNII*IGITGIVSWAFIANFPDCRPI 326
           R + L G C+L    +G   I+ W  + NFPDC  I
Sbjct: 154 RVFLLIGMCWLIAFSLGALPILGWNCLENFPDCSTI 189

>RPOB_CHLTR (O84317) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1252

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 328 DIGLQSGKFAINAQDTMPVIPIQMMLRKQPNNGY 227
           D G+QS K A+ A +  P+I    ML K P + Y
Sbjct: 267 DAGVQSLKIAVGADENHPII---KMLAKDPTDSY 297

>RPOB_CHLTA (Q3KM47) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1252

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 328 DIGLQSGKFAINAQDTMPVIPIQMMLRKQPNNGY 227
           D G+QS K A+ A +  P+I    ML K P + Y
Sbjct: 267 DAGVQSLKIAVGADENHPII---KMLTKDPTDSY 297

>RPOB_CHLMU (P56869) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1252

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 328 DIGLQSGKFAINAQDTMPVIPIQMMLRKQPNNGY 227
           D G+QS K A+ A +  P+I    ML K P + Y
Sbjct: 267 DAGVQSLKIAVGADENHPII---KMLAKDPTDSY 297

>FNDC3_MOUSE (Q8BX90) Fibronectin type-III domain-containing protein 3a|
          Length = 1134

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = -3

Query: 334  HQDIGLQSGKFAINAQDTMPVIPIQMMLRKQPNNGYFRVMGLLAGACSDYKASKWAQTIQ 155
            HQ++ L+ G+       T+    +Q  L+ +  NG F  + L  G C  YK  + +++  
Sbjct: 900  HQNLKLKWGE---GTPKTLSTDAVQYHLQMEDRNGRF--VSLYRGPCHTYKVQRLSESTS 954

Query: 154  ICSCIR 137
               CI+
Sbjct: 955  YKFCIQ 960

>SYD_CHLTE (Q8KCT7) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 603

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = -3

Query: 313 SGKFAINAQDTMPVIPIQMMLRKQPNNGYFRVMGLLAGACSDYKASKWAQTIQICSCIRK 134
           +G   I  ++  P  P+   L +   N     +G++ G    + A KW +T +I   +R 
Sbjct: 365 AGLAYIQFKEEGPKGPVVKFLSEAEMNALKERLGIVTGDVVFFGAGKWEKTCKIMGGMRN 424

Query: 133 YY 128
           Y+
Sbjct: 425 YF 426

>UROK_MOUSE (P06869) Urokinase-type plasminogen activator precursor (EC|
           3.4.21.73) (uPA) (U-plasminogen activator) [Contains:
           Urokinase-type plasminogen activator long chain A;
           Urokinase-type plasminogen activator short chain A;
           Urokinase-type plasminogen
          Length = 433

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
 Frame = -1

Query: 207 WQGPAVTTKPASGHKPFKYAAVSG--NIIWGPICSHKQ-CSVSVSFLKCVKSAYHHKCKI 37
           W  PAV  KP + H+P   +   G  N    P    +  C V +   + V+    H C +
Sbjct: 95  WNAPAVLQKPYNAHRPDAISLGLGKHNYCRNPDNQKRPWCYVQIGLRQFVQECMVHDCSL 154

Query: 36  S 34
           S
Sbjct: 155 S 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,710,368
Number of Sequences: 219361
Number of extensions: 1191667
Number of successful extensions: 2902
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2900
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)