>SMYD4_PONPY (Q5R5X9) SET and MYND domain-containing protein 4|
          Length = 804

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 283 YCHRCIKLLAGVLSCSGCS 339
           YCHRC+K     + C GCS
Sbjct: 295 YCHRCLKHTLATVPCDGCS 313

>SMYD4_HUMAN (Q8IYR2) SET and MYND domain-containing protein 4|
          Length = 804

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 283 YCHRCIKLLAGVLSCSGCS 339
           YCHRC+K     + C GCS
Sbjct: 295 YCHRCLKHTLATVPCDGCS 313

>SMYD4_CHICK (Q5F3V0) SET and MYND domain-containing protein 4|
          Length = 742

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 283 YCHRCIKLLAGVLSCSGCS 339
           YCH C+K L   + C GCS
Sbjct: 294 YCHHCLKQLLASIPCCGCS 312

>UBR1_CAEEL (P91133) Ubiquitin-protein ligase E3 component N-recognin (EC|
            6.-.-.-) (Ubiquitin-protein ligase E3-alpha)
          Length = 1927

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 341  PEQPEQLSTPANNLMQRWQYCSSCPSGAS*PHKRTGFVLAVLLLHRAHP 195
            P +P+   TP + L+      S  P+ A  PH  T F   V L + A P
Sbjct: 1560 PPRPKLAQTPGSPLLSAPSTSSFTPAPAQIPHSGTNFAFLVQLFNPAGP 1608

>CATA_BACST (P14412) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)|
          Length = 735

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 143 WWPLSLSLTCMHRH*TRPDGHD 208
           WWP  L+L+ +H+H  + + HD
Sbjct: 31  WWPNQLNLSILHQHDRKTNPHD 52

>TELT_MOUSE (O70548) Telethonin (Titin cap protein)|
          Length = 167

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 178 QTLNEAGWARWRSSTANTKPVRLCG*LAPDGHEEQYCHR 294
           Q   EA WA W+  T +T+P   C     D    +  HR
Sbjct: 15  QERREAFWAEWKDLTLSTRPEEGCSLHEEDTQRHETYHR 53

>SMYD4_MOUSE (Q8BTK5) SET and MYND domain-containing protein 4|
          Length = 799

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 283 YCHRCIKLLAGVLSCSGCS 339
           YCHRC+K     + C  CS
Sbjct: 295 YCHRCLKHTLATVPCGSCS 313

>NIKE_ECOL6 (Q8FCM9) Nickel import ATP-binding protein nikE (EC 3.6.3.24)|
          Length = 268

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 2  SKLQHLYTHSGFTGSIQHQ 58
          S L H Y H GF+G  QHQ
Sbjct: 7  SDLSHHYAHGGFSGKHQHQ 25

>NIKE_ECO57 (Q8X4L6) Nickel import ATP-binding protein nikE (EC 3.6.3.24)|
          Length = 268

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 2  SKLQHLYTHSGFTGSIQHQ 58
          S L H Y H GF+G  QHQ
Sbjct: 7  SDLSHHYAHGGFSGKHQHQ 25

>VIF_CAEVC (P33462) Virion infectivity factor (Q protein) (SOR protein)|
          Length = 229

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/50 (30%), Positives = 18/50 (36%)
 Frame = -1

Query: 293 RWQYCSSCPSGAS*PHKRTGFVLAVLLLHRAHPASFSVCACM*VREREAT 144
           RW  C SC  G    H RT  +  ++LL       F V      R    T
Sbjct: 150 RWDLCKSCAQGEVVKHTRTKSLERLVLLQMVEQHVFQVLPLWRARRSSTT 199

>TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36)
          Length = 325

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 269 DTRSSTATVALNYWPACSVAPAAPEGAERLDGRRPEDVXG 388
           +T SST+  +   W   S   + PE A RL GR    V G
Sbjct: 23  ETESSTSWASSGPWSLSSSDSSLPEAAARLPGRSTSLVEG 62

>ZN297_MOUSE (Q9Z0G7) Zinc finger protein 297 (BING1 protein)|
          Length = 638

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 295 NGGSTAPRVHPALASHTNGRASCWQYCSSIVPIRPR 188
           NGG+ AP    ++ SHT+ RAS  Q  SS     PR
Sbjct: 178 NGGTVAPATVGSVRSHTSSRASENQSPSSSNYFSPR 213

>NIKE_ECOLI (P33594) Nickel import ATP-binding protein nikE (EC 3.6.3.24)|
          Length = 268

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 2  SKLQHLYTHSGFTGSIQHQ 58
          S L H Y H GF G  QHQ
Sbjct: 7  SGLSHHYAHGGFNGKHQHQ 25

>DSRAD_HUMAN (P55265) Double-stranded RNA-specific adenosine deaminase (EC|
           3.5.4.-) (DRADA) (136 kDa double-stranded RNA-binding
           protein) (P136) (K88DSRBP) (Interferon-inducible protein
           4) (IFI-4 protein)
          Length = 1226

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +2

Query: 122 KSENGDPWWPLSLSLTCMHRH*--TRPDGHDGGAVLPTRSPSV 244
           K     P W +++S    ++H    RPDGH  GA  P   PS+
Sbjct: 187 KEAGTPPLWKIAVSTQAWNQHSGVVRPDGHSQGA--PNSDPSL 227


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,981,022
Number of Sequences: 219361
Number of extensions: 1017836
Number of successful extensions: 2408
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2407
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)