ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags24h06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X69422.1|AFTETUBI A.fatua mRNA for tetraubiquitin Length = 1196 Score = 398 bits (201), Expect = e-108 Identities = 265/286 (92%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 488 gccaccgcggaggcggagcaccaagtggagggtggactccttctggatgttgtagtccgc 429 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 428 aagggtgcggccatcctcaagctgcttaccagcaaagatcaggcgctgctggtccggggg 369 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 368 aatgccctccttgtcctggatcttggccttcacattgtcaatggtgtcagacgactcaac 309 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| | ||| Sbjct: 308 ctccagggtgatggtcttgccggtgagggtcttgacgaagatctgcatgccaccgcggag 249 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||| ||| || ||||||||||||||||||||||||| Sbjct: 248 gcggagcaccaggtggag-ggtggactccttctggatgttgtagtc 204 Score = 389 bits (196), Expect = e-105 Identities = 300/333 (90%), Gaps = 2/333 (0%) Strand = Plus / Minus Query: 123 ttgtgagcccaga-gacataagcagctccatggccaagcacttacaggccaccacggagg 181 |||||| |||||| |||| ||| | ||||||||||| |||||||| ||||||||||||| Sbjct: 991 ttgtgaacccagatgacacaagaacctccatggccaggcacttactggccaccacggaga 932 Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| |||||||||||||| |||||||| || || ||||||||| Sbjct: 931 cggagcaccaggtgaagggtggactccttctggatgttgtagtcggcaagggtgcggcca 872 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 ||||| |||||||| || |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 871 tcctcgagctgcttgccggcaaagatgaggcgctgctggtccggggggatgccctccttg 812 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||||||||| ||||||||||| ||||||||||| | ||||||| Sbjct: 811 tcctggatcttggccttcacattgtcaatggtgtcagacgactcaacctctaaggtgatg 752 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||| | Sbjct: 751 gtcttgccagtgagggtcttgacgaagatctgcatgccaccacggaggcggagcaccagg 692 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 || || ||||||||||||||||||||||||| Sbjct: 691 tggag-ggtggactccttctggatgttgtagtc 660 Score = 359 bits (181), Expect = 5e-96 Identities = 260/286 (90%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 ||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 716 gccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggc 657 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| || || Sbjct: 656 gagagtgcggccgtcctcaagttgctttccagcaaagatgagacgctgctggtctggagg 597 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||| ||||||||||||||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 596 gatgccttccttgtcctggatcttcgccttcacattgtcgattgtgtctgaagactcaac 537 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 |||||||||||||||||| |||||||||||||| |||||||||||||| ||||| | ||| Sbjct: 536 ctccagggtgatggtcttaccagtgagggtcttgacgaagatctgcatgccaccgcggag 477 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||| ||| || ||||||||||||||||||||||||| Sbjct: 476 gcggagcaccaagtggag-ggtggactccttctggatgttgtagtc 432 Score = 272 bits (137), Expect = 9e-70 Identities = 205/228 (89%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 260 gccaccgcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcagc 201 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || |||||||| ||||| || ||||| |||||||| |||||||||||||| ||||| || Sbjct: 200 aagggtgcggccgtcctctagttgcttgccagcaaatatgaggcgctgctgatccggagg 141 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| || Sbjct: 140 gatgccttccttgtcctggatctttgccttgacattgtcaatggtgtcagaagactcgac 81 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| || |||||||||||||||||||||||||| || ||||||||||| Sbjct: 80 ctcaagtgtgatggtcttgccagtgagggtcttcacaaagatctgcat 33
>gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 Score = 363 bits (183), Expect = 3e-97 Identities = 272/302 (90%), Gaps = 1/302 (0%) Strand = Plus / Minus Query: 150 catggccaagcacttacaggccaccacggaggcggagcaccaagtggagggtcgactcct 209 ||||||| || |||||| ||||||||||||| |||||||||| |||||| || ||||||| Sbjct: 4847 catggcccaggacttactggccaccacggagacggagcaccaggtggagagtggactcct 4788 Query: 210 tctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatga 269 ||||||| |||||||| ||||| |||||||||||||| |||||||| || || ||||||| Sbjct: 4787 tctggatgttgtagtctgccagggtgcggccatcctccagctgcttgccggcgaagatga 4728 Query: 270 ggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcacattgtcga 329 | |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4727 gacgctgctggtccggggggatgccctccttgtcctggatcttcgccttcacattgtcga 4668 Query: 330 tggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtcttaacgaaga 389 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| | Sbjct: 4667 tggtgtcagaggactccacctccagggtgatggtcttgccggtgagggtcttgacgaara 4608 Query: 390 tctgcataccacccctgaggcggagcaccangtgcaganttggactccttctggatgttg 449 ||||||||||||| | ||||||||||||| ||| || |||||||||||||||||||| Sbjct: 4607 tctgcataccaccgcgaaggcggagcaccaggtgaag-ggtggactccttctggatgttg 4549 Query: 450 ta 451 || Sbjct: 4548 ta 4547 Score = 323 bits (163), Expect = 3e-85 Identities = 253/285 (88%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||||| ||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 4371 ccaccacgaaggcggagcaccaggtgaagggtggactcyttctggatgttgtantccgca 4312 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || ||||||||||||||||| ||||| || || || ||||| |||||||||||||| ||| Sbjct: 4311 agggtgcggccatcctcaagytgcttgccggcgaaratgagacgctgctggtccgggggg 4252 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 4251 atgccctccttgtcctggatcttcgccttcacattgtcaatggtgtccgaggactccacc 4192 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 4191 tccaaggtgatggtcttgccagtgagggtcttgacgaagatctgcatgccacccctgagc 4132 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||| ||| | ||||||||||||||||||||||| Sbjct: 4131 ctgagcacaaggtggagag-tcgactccttctggatgttgtagtc 4088 Score = 321 bits (162), Expect = 1e-84 Identities = 251/282 (89%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||| || ||||||||||||| ||| ||||| |||||||||||||| ||||| || ||| Sbjct: 4599 ccaccgcgaaggcggagcaccaggtgaagggtggactccttctggatgttgtantctgcc 4540 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || ||||||||||||||||||||||| ||||||||||| | |||||||||||||| ||| Sbjct: 4539 agggtgcggccatcctcaagctgcttgccagcaaagataaracgctgctggtccgggggg 4480 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||| ||| Sbjct: 4479 atgccctccttatcctggatcttcgccttcacattgtcaatggtgtcagaggactccacc 4420 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| ||||||||||| ||||| |||||||||||||| | ||| Sbjct: 4419 tccagggtgatggtcttgccggtgagggtcttgacgaaaatctgcataccaccacgaagg 4360 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgta 451 |||||||||| ||| || ||||||| |||||||||||||| Sbjct: 4359 cggagcaccaggtgaag-ggtggactcyttctggatgttgta 4319 Score = 262 bits (132), Expect = 9e-67 Identities = 236/271 (87%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | |||||| ||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 4129 gagcacaaggtggagagtcgactccttctggatgttgtagtcagcgagggtgcggccatc 4070 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| ||||| || |||| |||||||||||||| ||||| ||||||||||| Sbjct: 4069 ctcgagctgcttgccagcgaaaatgaracgctgctggtccggggggattccctccttgtc 4010 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||| || Sbjct: 4009 ctggatcttggccttcacgttgtcgatcgtgtcagaagactcgacctcaagcgtgatagt 3950 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 |||||||||||||||||| ||||| |||||||| || ||||| || | |||||||| ||| Sbjct: 3949 cttgccagtgagggtcttgacgaaaatctgcatgcctcccctaagcctgagcaccaggtg 3890 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 3889 gag-ggtggactccttctggatgttgtagtc 3860 Score = 222 bits (112), Expect = 8e-55 Identities = 187/213 (87%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||||| ||||||||| |||||||||||||| |||||||| || || || |||||||| Sbjct: 3901 gagcaccaggtggagggtggactccttctggatgttgtagtcagctagggtacggccatc 3842 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| |||||||| || || | |||||| || || || ||||| |||||||| Sbjct: 3841 ctcgagctgcttgccagcaaaratcagcctctgctgatctggaggaatgccttccttgtc 3782 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| || ||||| || ||||||||||| ||||||||||| Sbjct: 3781 ctggatcttagccttgacattgtcaatagtgtctgaggactcaacctcaagggtgatggt 3722 Query: 364 cttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||||||||| |||||||| Sbjct: 3721 cttgccagtgagggtcttaacgaaaatctgcat 3689
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 357 bits (180), Expect = 2e-95 Identities = 280/313 (89%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 142 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 201 |||||||||||||| || |||||| |||||||||||||||||||||||| |||||| || Sbjct: 28020554 agcagctccatggctgaggacttactggccaccacggaggcggagcaccaggtggagtgt 28020495 Query: 202 cgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 261 |||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 28020494 ggactccttctggatgttgtaatccgcaagggtgcggccatcctcaagctgcttaccagc 28020435 Query: 262 aaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcac 321 |||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 28020434 aaagatcagacgctgctggtccggggggatgccctccttgtcctggatcttcgccttcac 28020375 Query: 322 attgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctt 381 ||||| || ||||| || ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 28020374 gttgtcaatagtgtcggacgactcaacctcaagggtaatggtcttgccagtcagggtctt 28020315 Query: 382 aacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttct 441 |||||||||||||| ||||||||||| | ||| |||| ||| || |||||||||||| Sbjct: 28020314 cacgaagatctgcatcccacccctgagcctgagaaccaggtgaag-ggtggactccttct 28020256 Query: 442 ggatgttgtagtc 454 ||||||||||||| Sbjct: 28020255 ggatgttgtagtc 28020243 Score = 305 bits (154), Expect = 7e-80 Identities = 242/271 (89%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 28019372 gagcacaaggtggagggtagactccttctggatgttgtagtcggccagggtgcggccatc 28019313 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 28019312 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtc 28019253 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 28019252 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggt 28019193 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| |||||||||||||| || |||||||| | |||||| | ||| Sbjct: 28019192 cttgccagtcaaggtcttgacgaagatctgcatgcctcccctgagcctgagcacaaggtg 28019133 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 28019132 gag-ggtggactccttctggatgttgtagtc 28019103 Score = 281 bits (142), Expect = 1e-72 Identities = 195/213 (91%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 28019144 gagcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatc 28019085 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 28019084 ctcaagctgcttgccagcaaagatgagacgctgctggtccggggggatgccctccttgtc 28019025 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 28019024 ctggatcttggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggt 28018965 Query: 364 cttgccagtgagggtcttaacgaagatctgcat 396 |||||| ||||||||||| || ||||||||||| Sbjct: 28018964 cttgccggtgagggtcttcacaaagatctgcat 28018932 Score = 274 bits (138), Expect = 2e-70 Identities = 235/267 (88%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||| |||||||||||||| |||||||| |||| |||||||||||||| Sbjct: 28020280 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 28020221 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 28020220 agctgcttgccggcgaagatgaggcgctgctggtccggggggataccctccttgtcctgg 28020161 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| |||||||| |||||||| ||||| || ||||| ||||| || |||||||||||| Sbjct: 28020160 atcttggccttcacgttgtcgatcgtgtccgaggactcgacctcaagcgtgatggtcttg 28020101 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||||||||| | |||||| | ||| || Sbjct: 28020100 ccggtcagggtcttgacgaagatctgcataccacccctgagcctgagcacaaggtggag- 28020042 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 28020041 ggtggactccttctggatgttgtagtc 28020015 Score = 274 bits (138), Expect = 2e-70 Identities = 238/271 (87%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| || || |||||||| || Sbjct: 28020056 gagcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccgtc 28019997 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 28019996 ctccagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtc 28019937 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||||||||||||||| ||||| || ||||| ||||| || |||||||| Sbjct: 28019936 ctggatcttggccttcacattgtcgatcgtgtccgaggactcgacctcaagtgtgatggt 28019877 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| |||||||| ||||||||||||||||| |||||||| | ||||| | ||| Sbjct: 28019876 cttgccagtcagggtcttgacgaagatctgcatacctcccctgagcctaagcacaaggtg 28019817 Query: 424 caganttggactccttctggatgttgtagtc 454 || |||| |||||||||||||||||||| Sbjct: 28019816 gag-ggtggattccttctggatgttgtagtc 28019787 Score = 266 bits (134), Expect = 6e-68 Identities = 237/271 (87%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 28019600 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 28019541 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 28019540 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtc 28019481 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 28019480 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggt 28019421 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| |||||||||||||| || |||||||| | |||||| | ||| Sbjct: 28019420 cttgccagtcaaggtcttgacgaagatctgcatgcctcccctgagcctgagcacaaggtg 28019361 Query: 424 caganttggactccttctggatgttgtagtc 454 || | ||||||||||||||||||||||| Sbjct: 28019360 gag-ggtagactccttctggatgttgtagtc 28019331 Score = 264 bits (133), Expect = 2e-67 Identities = 230/262 (87%), Gaps = 1/262 (0%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| || ||||||||||| |||||||| || || |||||||| ||||| ||||| Sbjct: 28019819 gtggagggtggattccttctggatgttgtagtcggcaagggtgcggccgtcctccagctg 28019760 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| || || |||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 28019759 cttgccggcgaagatgagacgctgctggtccggggggatgccctccttgtcctggatctt 28019700 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 |||||||| |||||||| ||||| || ||||| ||||| ||||||||||||||||| || Sbjct: 28019699 ggccttcacgttgtcgatcgtgtccgaggactcgacctcgagggtgatggtcttgccggt 28019640 Query: 373 gagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttgg 432 |||||||| ||||||||||||||||| |||||||| | |||||| | ||| || ||| Sbjct: 28019639 cagggtcttgacgaagatctgcatacctcccctgagcctgagcacaaggtggag-ggtgg 28019581 Query: 433 actccttctggatgttgtagtc 454 |||||||||||||||||||||| Sbjct: 28019580 actccttctggatgttgtagtc 28019559 Score = 232 bits (117), Expect = 8e-58 Identities = 182/204 (89%) Strand = Plus / Plus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| |||||||||||||| ||||| ||||| || |||||||||||||| || || Sbjct: 27575471 gtggagggtggactccttctggatgttgtaatccgcgagggtgcggccatcctctagttg 27575530 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| |||||||||||||| || |||||||| ||||| ||||||||||||||||| ||||| Sbjct: 27575531 cttgccagcaaagatgagacgttgctggtcaggtggaatgccctccttgtcctgaatctt 27575590 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 |||||||||||||| || || ||||| ||||||||||| |||||||||||||||||||| Sbjct: 27575591 ggccttcacattgtcaattgtatcagaggactcaacctcgagggtgatggtcttgccagt 27575650 Query: 373 gagggtcttaacgaagatctgcat 396 ||| ||||| || ||||||||||| Sbjct: 27575651 gagtgtcttcacaaagatctgcat 27575674 Score = 200 bits (101), Expect = 3e-48 Identities = 234/278 (84%), Gaps = 1/278 (0%) Strand = Plus / Plus Query: 174 cacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagag 233 |||||||||||||||||| ||| | ||| ||||||||||| || ||||| || ||||| | Sbjct: 27575224 cacggaggcggagcaccaggtgcaaggtggactccttctgaatgttgtaatcagccagtg 27575283 Query: 234 tgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgc 293 | || |||||||| |||||||| | |||||||||||||||||||||||||| || || | Sbjct: 27575284 tacgtccatcctcgagctgcttgtctgcaaagatgaggcgctgctggtccgggggaattc 27575343 Query: 294 cctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcca 353 ||||||||||||| ||||| ||||||||||||||||| |||| || ||||| ||| | | Sbjct: 27575344 cctccttgtcctgaatcttcgccttcacattgtcgatcttgtccgaggactcgaccgcaa 27575403 Query: 354 gggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgga 413 | ||||||||||| || || | |||||| || ||||||||||| || ||||||||||| | Sbjct: 27575404 gagtgatggtctttcctgtcaaggtcttcacaaagatctgcatgcctcccctgaggcgaa 27575463 Query: 414 gcaccangtgcaganttggactccttctggatgttgta 451 | || | ||| || |||||||||||||||||||||| Sbjct: 27575464 ggacaaggtggag-ggtggactccttctggatgttgta 27575500 Score = 67.9 bits (34), Expect = 3e-08 Identities = 84/98 (85%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 303 cctggatctttgccttcacattgtcgatggtgtcagatg-actcaacctccagggtgatg 361 |||||||||| ||||| ||||||||||||||||| | || ||| ||||| || |||||| Sbjct: 26202146 cctggatcttggccttgacattgtcgatggtgtc-gctgctctcgacctcgagagtgatg 26202088 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcatacc 399 ||||| || || || ||||| ||||||||||||||||| Sbjct: 26202087 gtcttccccgtcagcgtcttcacgaagatctgcatacc 26202050 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 284 ggtgggatgccctccttgtcctggatctttgccttca 320 ||||| |||||||||||||| ||||| |||| ||||| Sbjct: 27589917 ggtggtatgccctccttgtcatggatttttgacttca 27589953
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 357 bits (180), Expect = 2e-95 Identities = 280/313 (89%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 142 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 201 |||||||||||||| || |||||| |||||||||||||||||||||||| |||||| || Sbjct: 65373 agcagctccatggctgaggacttactggccaccacggaggcggagcaccaggtggagtgt 65314 Query: 202 cgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 261 |||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 65313 ggactccttctggatgttgtaatccgcaagggtgcggccatcctcaagctgcttaccagc 65254 Query: 262 aaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcac 321 |||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 65253 aaagatcagacgctgctggtccggggggatgccctccttgtcctggatcttcgccttcac 65194 Query: 322 attgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctt 381 ||||| || ||||| || ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 65193 gttgtcaatagtgtcggacgactcaacctcaagggtaatggtcttgccagtcagggtctt 65134 Query: 382 aacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttct 441 |||||||||||||| ||||||||||| | ||| |||| ||| || |||||||||||| Sbjct: 65133 cacgaagatctgcatcccacccctgagcctgagaaccaggtgaag-ggtggactccttct 65075 Query: 442 ggatgttgtagtc 454 ||||||||||||| Sbjct: 65074 ggatgttgtagtc 65062 Score = 305 bits (154), Expect = 7e-80 Identities = 242/271 (89%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 64191 gagcacaaggtggagggtagactccttctggatgttgtagtcggccagggtgcggccatc 64132 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 64131 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtc 64072 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 64071 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggt 64012 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| |||||||||||||| || |||||||| | |||||| | ||| Sbjct: 64011 cttgccagtcaaggtcttgacgaagatctgcatgcctcccctgagcctgagcacaaggtg 63952 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 63951 gag-ggtggactccttctggatgttgtagtc 63922 Score = 281 bits (142), Expect = 1e-72 Identities = 195/213 (91%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 63963 gagcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatc 63904 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 63903 ctcaagctgcttgccagcaaagatgagacgctgctggtccggggggatgccctccttgtc 63844 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 63843 ctggatcttggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggt 63784 Query: 364 cttgccagtgagggtcttaacgaagatctgcat 396 |||||| ||||||||||| || ||||||||||| Sbjct: 63783 cttgccggtgagggtcttcacaaagatctgcat 63751 Score = 274 bits (138), Expect = 2e-70 Identities = 235/267 (88%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||| |||||||||||||| |||||||| |||| |||||||||||||| Sbjct: 65099 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 65040 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 65039 agctgcttgccggcgaagatgaggcgctgctggtccggggggataccctccttgtcctgg 64980 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| |||||||| |||||||| ||||| || ||||| ||||| || |||||||||||| Sbjct: 64979 atcttggccttcacgttgtcgatcgtgtccgaggactcgacctcaagcgtgatggtcttg 64920 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||||||||| | |||||| | ||| || Sbjct: 64919 ccggtcagggtcttgacgaagatctgcataccacccctgagcctgagcacaaggtggag- 64861 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 64860 ggtggactccttctggatgttgtagtc 64834 Score = 274 bits (138), Expect = 2e-70 Identities = 238/271 (87%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| || || |||||||| || Sbjct: 64875 gagcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccgtc 64816 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 64815 ctccagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtc 64756 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||||||||||||||| ||||| || ||||| ||||| || |||||||| Sbjct: 64755 ctggatcttggccttcacattgtcgatcgtgtccgaggactcgacctcaagtgtgatggt 64696 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| |||||||| ||||||||||||||||| |||||||| | ||||| | ||| Sbjct: 64695 cttgccagtcagggtcttgacgaagatctgcatacctcccctgagcctaagcacaaggtg 64636 Query: 424 caganttggactccttctggatgttgtagtc 454 || |||| |||||||||||||||||||| Sbjct: 64635 gag-ggtggattccttctggatgttgtagtc 64606 Score = 266 bits (134), Expect = 6e-68 Identities = 237/271 (87%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 64419 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 64360 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 64359 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtc 64300 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 64299 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggt 64240 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| |||||||||||||| || |||||||| | |||||| | ||| Sbjct: 64239 cttgccagtcaaggtcttgacgaagatctgcatgcctcccctgagcctgagcacaaggtg 64180 Query: 424 caganttggactccttctggatgttgtagtc 454 || | ||||||||||||||||||||||| Sbjct: 64179 gag-ggtagactccttctggatgttgtagtc 64150 Score = 264 bits (133), Expect = 2e-67 Identities = 230/262 (87%), Gaps = 1/262 (0%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| || ||||||||||| |||||||| || || |||||||| ||||| ||||| Sbjct: 64638 gtggagggtggattccttctggatgttgtagtcggcaagggtgcggccgtcctccagctg 64579 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| || || |||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 64578 cttgccggcgaagatgagacgctgctggtccggggggatgccctccttgtcctggatctt 64519 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 |||||||| |||||||| ||||| || ||||| ||||| ||||||||||||||||| || Sbjct: 64518 ggccttcacgttgtcgatcgtgtccgaggactcgacctcgagggtgatggtcttgccggt 64459 Query: 373 gagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttgg 432 |||||||| ||||||||||||||||| |||||||| | |||||| | ||| || ||| Sbjct: 64458 cagggtcttgacgaagatctgcatacctcccctgagcctgagcacaaggtggag-ggtgg 64400 Query: 433 actccttctggatgttgtagtc 454 |||||||||||||||||||||| Sbjct: 64399 actccttctggatgttgtagtc 64378
>gb|AF093504.1|AF093504 Saccharum hybrid cultivar H32-8560 tetra-ubiquitin (ubi4) gene, complete cds Length = 5551 Score = 357 bits (180), Expect = 2e-95 Identities = 264/292 (90%), Gaps = 1/292 (0%) Strand = Plus / Minus Query: 163 ttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgta 222 |||| ||||||||||||| |||||||||| |||||| || |||||||||||||| ||||| Sbjct: 2720 ttactggccaccacggagacggagcaccaggtggagagtggactccttctggatgttgta 2661 Query: 223 gtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 282 ||| ||||| |||||||||||||| |||||||| || || |||||||| ||||||||||| Sbjct: 2660 gtctgccagggtgcggccatcctccagctgcttgccggcgaagatgagacgctgctggtc 2601 Query: 283 cggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatga 342 ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 2600 cggggggatgccctccttgtcctggatcttcgccttcacattgtcgatggtgtcagagga 2541 Query: 343 ctcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacc 402 ||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 2540 ctccacctccagggtgatggtcttgccggtgagggtcttgacgaagatctgcataccacc 2481 Query: 403 cctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 | | ||||||||||| ||| || ||||||||||||||||||||||||| Sbjct: 2480 gcgnaagcggagcaccaggtgaag-ggtggactccttctggatgttgtagtc 2430 Score = 262 bits (132), Expect = 9e-67 Identities = 223/254 (87%), Gaps = 1/254 (0%) Strand = Plus / Minus Query: 201 tcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccag 260 |||||||| ||||||| |||||||| || || |||||||||||||| |||||||| |||| Sbjct: 2226 tcgactccntctggatgttgtagtcagcgagggtgcggccatcctcgagctgcttgccag 2167 Query: 261 caaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttca 320 | |||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 2166 cgaagatgagacgctgctggtccggggggattccctccttgtcctggatcttggccttca 2107 Query: 321 cattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtct 380 | |||||||| |||||||| ||||| ||||| || ||||| ||||||||||||||||||| Sbjct: 2106 cgttgtcgatcgtgtcagaagactcgacctcaagcgtgatagtcttgccagtgagggtct 2047 Query: 381 taacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttc 440 | |||||||| ||||| || |||||||| | |||||||| ||| | ||||||||||| Sbjct: 2046 tgacgaagatttgcatgcctcccctgagcctgagcaccaggtggas-ggtggactccttc 1988 Query: 441 tggatgttgtagtc 454 |||||||||||||| Sbjct: 1987 tggatgttgtagtc 1974 Score = 236 bits (119), Expect = 5e-59 Identities = 234/274 (85%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 181 gcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcc 240 ||||||||||| ||| ||||| |||||||||||||| |||||||| || || |||||||| Sbjct: 2474 gcggagcaccaggtgaagggtggactccttctggatgttgtagtctgctagggtgcggcc 2415 Query: 241 atcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcctt 300 ||||||||||||||| |||||||| || || ||||||||||| || ||||| || ||||| Sbjct: 2414 atcctcaagctgcttgccagcaaaaataagacgctgctggtctggggggattccttcctt 2355 Query: 301 gtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgat 360 |||||||||||| ||||||||||||| |||||||| || ||||| ||||||| |||||| Sbjct: 2354 gtcctggatcttcnccttcacattgtcnatggtgtccgaagactccacctccaaggtgat 2295 Query: 361 ggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccan 420 |||||||||||| | |||||| || || |||||||| |||||||| | | |||||| | Sbjct: 2294 ggtcttgccagtnaaggtcttgacaaaaatctgcatgccacccctnaacctgagcacaag 2235 Query: 421 gtgcaganttggactccttctggatgttgtagtc 454 ||| | | | |||||| |||||||||||||||| Sbjct: 2234 gtggana-ntcgactccntctggatgttgtagtc 2202 Score = 214 bits (108), Expect = 2e-52 Identities = 184/213 (86%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||||| ||||| ||| |||||||||||||| |||||||| | || || |||||||| Sbjct: 2015 gagcaccaggtggasggtggactccttctggatgttgtagtcarctagggtacggccatc 1956 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| ||||||||||| || | |||||| ||||| || ||||| |||||||| Sbjct: 1955 ctcgagctgcttgccagcaaagatcagcctctgctgatccggaggaatgccttccttgtc 1896 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||| ||||| |||| |||| ||| || |||| || ||||||||||| ||||||||||| Sbjct: 1895 ctgtatcttagcctkgacatkgtcaataktgtctgaagactcaacctcaagggtgatggt 1836 Query: 364 cttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||||||||||||||||||||||||| Sbjct: 1835 cttgccagtgagggtcttaacgaagatctgcat 1803
>emb|X56803.1|TAMRNAU T.aestivum L. mRNA for ubiquitin Length = 436 Score = 355 bits (179), Expect = 8e-95 Identities = 250/274 (91%) Strand = Plus / Minus Query: 123 ttgtgagcccagagacataagcagctccatggccaagcacttacaggccaccacggaggc 182 |||||| |||||||||| ||||||||||||||||| | ||||| ||||||||||||| | Sbjct: 276 ttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacggagac 217 Query: 183 ggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccat 242 ||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||| Sbjct: 216 ggagcaccaagtgaagggtggactccttctggatgttgtagtccgccaaggtgcggccat 157 Query: 243 cctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgt 302 |||||||||||||||| ||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 156 cctcaagctgcttaccggcaaagatgagacgctgctggtccgggggaatgccctccttgt 97 Query: 303 cctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatgg 362 |||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 96 cctggatcttcgccttcacgttgtcaatggtgtcagatgactccacctccagggtgatgg 37 Query: 363 tcttgccagtgagggtcttaacgaagatctgcat 396 ||||||| ||||||||||| || || |||||||| Sbjct: 36 tcttgccggtgagggtcttcacaaatatctgcat 3 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 198 tggactccttctggatgttgtagtc 174
>emb|X56601.1|TAUBIQU Wheat mRNA for ubiquitin Length = 436 Score = 355 bits (179), Expect = 8e-95 Identities = 250/274 (91%) Strand = Plus / Minus Query: 123 ttgtgagcccagagacataagcagctccatggccaagcacttacaggccaccacggaggc 182 |||||| |||||||||| ||||||||||||||||| | ||||| ||||||||||||| | Sbjct: 276 ttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacggagac 217 Query: 183 ggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccat 242 ||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||| Sbjct: 216 ggagcaccaagtgaagggtggactccttctggatgttgtagtccgccaaggtgcggccat 157 Query: 243 cctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgt 302 |||||||||||||||| ||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 156 cctcaagctgcttaccggcaaagatgagacgctgctggtccgggggaatgccctccttgt 97 Query: 303 cctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatgg 362 |||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 96 cctggatcttcgccttcacgttgtcaatggtgtcagatgactccacctccagggtgatgg 37 Query: 363 tcttgccagtgagggtcttaacgaagatctgcat 396 ||||||| ||||||||||| || || |||||||| Sbjct: 36 tcttgccggtgagggtcttcacaaatatctgcat 3 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 198 tggactccttctggatgttgtagtc 174
>gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 351 bits (177), Expect = 1e-93 Identities = 265/294 (90%), Gaps = 1/294 (0%) Strand = Plus / Minus Query: 161 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttg 220 |||||| ||||||||||||| || ||||||| ||||||||| |||||||||||||| ||| Sbjct: 1213 acttactggccaccacggagacgaagcaccaggtggagggtggactccttctggatgttg 1154 Query: 221 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 280 || |||||||| |||||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 1153 taatccgccagggtgcggccatcctccagctgcttgccagcaaagatcagacgctgctgg 1094 Query: 281 tccggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat 340 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1093 tccggcgggatgccctccttgtcctggatctttgccttaacattgtcgatggtgtcagat 1034 Query: 341 gactcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatacca 400 ||||| ||||||||||||||||||||||||||||||||||| || || |||||||| ||| Sbjct: 1033 gactccacctccagggtgatggtcttgccagtgagggtcttgacaaaaatctgcatgcca 974 Query: 401 cccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | || || | ||| || ||||||||||||||||||||||||| Sbjct: 973 cccctgagcctcaggacgaggtggag-ggtggactccttctggatgttgtagtc 921 Score = 289 bits (146), Expect = 4e-75 Identities = 231/259 (89%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| |||||||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 953 gtggagggtggactccttctggatgttgtagtcggcgagggtgcggccatcctcaagctg 894 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 893 cttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcctggatctt 834 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 |||||||| |||||||||||||| || ||||| ||||| ||||||||||||||||| || Sbjct: 833 ggccttcacgttgtcgatggtgtccgaggactccacctcaagggtgatggtcttgccggt 774 Query: 373 gagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttgg 432 ||||||||| || ||||||||||| ||||||||||| | ||| || | ||| || ||| Sbjct: 773 gagggtcttcacaaagatctgcatgccacccctgagcctgaggacaaggtggag-ggtgg 715 Query: 433 actccttctggatgttgta 451 ||||||||||||||||||| Sbjct: 714 actccttctggatgttgta 696 Score = 264 bits (133), Expect = 2e-67 Identities = 230/262 (87%), Gaps = 1/262 (0%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| |||||||||||||| ||||| || || || || ||||| ||||||||||| Sbjct: 725 gtggagggtggactccttctggatgttgtaatcagcaagggtacggccgtcctcaagctg 666 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| ||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 665 cttcccagcgaagatgagacgctgctggtccggagggatgccttccttgtcctggatctt 606 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 |||||||| |||||||||||||| || ||||| ||||| || |||||||||||||| || Sbjct: 605 ggccttcacgttgtcgatggtgtccgaggactccacctcaagcgtgatggtcttgccggt 546 Query: 373 gagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttgg 432 ||||||||| |||||||||||||| ||||||||||| | || |||| ||| || ||| Sbjct: 545 gagggtcttcacgaagatctgcatgccacccctgagcctcaggaccaggtggag-ggtgg 487 Query: 433 actccttctggatgttgtagtc 454 |||||||||||||||||||||| Sbjct: 486 actccttctggatgttgtagtc 465 Score = 260 bits (131), Expect = 4e-66 Identities = 231/264 (87%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||||||||| |||||||||||||| |||||||| || || || ||||| |||||| Sbjct: 502 accaggtggagggtggactccttctggatgttgtagtcagcaagggtacggccgtcctca 443 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| ||||| |||||||| |||||||||||||| || |||||||||||||||||| Sbjct: 442 agctgcttcccagcgaagatgagacgctgctggtccgggggaatgccctccttgtcctgg 383 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| |||||||| |||||||||||||| || ||||| ||||| || |||||||||||| Sbjct: 382 atcttggccttcacgttgtcgatggtgtccgaggactccacctcaagcgtgatggtcttg 323 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || ||||||||||| |||||||||||||| || |||||||| | ||| || | ||| || Sbjct: 322 ccggtgagggtcttcacgaagatctgcatgcctcccctgagcctgaggacaaggtggag- 264 Query: 428 nttggactccttctggatgttgta 451 |||||||||||||||||||||| Sbjct: 263 ggtggactccttctggatgttgta 240 Score = 232 bits (117), Expect = 8e-58 Identities = 182/204 (89%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| |||||||||||||| ||||| || || || || ||||| ||||||||||| Sbjct: 269 gtggagggtggactccttctggatgttgtaatcagcaagggtacggccgtcctcaagctg 210 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| ||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 209 cttcccagcgaagatgagacgctgctggtccggggggattccctccttgtcctggatctt 150 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 |||||| || ||||| ||||| || || ||||||||||| ||||||||||||||||| || Sbjct: 149 tgccttgacgttgtcaatggtatccgaggactcaacctcgagggtgatggtcttgccggt 90 Query: 373 gagggtcttaacgaagatctgcat 396 ||||||||| |||||||||||||| Sbjct: 89 gagggtctttacgaagatctgcat 66
>dbj|AK121590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037P03, full insert sequence Length = 1983 Score = 349 bits (176), Expect = 5e-93 Identities = 279/313 (89%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 142 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 201 |||||||||||||| || |||||| |||||||||||||||||||||||| |||||| || Sbjct: 1694 agcagctccatggctgaggacttactggccaccacggaggcggagcaccaggtggagtgt 1635 Query: 202 cgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 261 |||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 1634 ggactccttctggatgttgtaatccgcaagggtgcggccatcctcaagctgcttaccagc 1575 Query: 262 aaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcac 321 |||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1574 aaagatcagacgctgctggtccggggggatgccctccttgtcctggatcttcgccttcac 1515 Query: 322 attgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctt 381 ||||| || ||||| || ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1514 gttgtcaatagtgtcggacgactcaacctcaagggtaatggtcttgccagtcagggtctt 1455 Query: 382 aacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttct 441 ||||| |||||||| ||||||||||| | ||| |||| ||| || |||||||||||| Sbjct: 1454 cacgaatatctgcatcccacccctgagcctgagaaccaggtgaag-ggtggactccttct 1396 Query: 442 ggatgttgtagtc 454 ||||||||||||| Sbjct: 1395 ggatgttgtagtc 1383 Score = 305 bits (154), Expect = 7e-80 Identities = 242/271 (89%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 512 gagcacaaggtggagggtagactccttctggatgttgtagtcggccagggtgcggccatc 453 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 452 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtc 393 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 392 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggt 333 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| |||||||||||||| || |||||||| | |||||| | ||| Sbjct: 332 cttgccagtcaaggtcttgacgaagatctgcatgcctcccctgagcctgagcacaaggtg 273 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 272 gag-ggtggactccttctggatgttgtagtc 243 Score = 281 bits (142), Expect = 1e-72 Identities = 195/213 (91%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 284 gagcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatc 225 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 224 ctcaagctgcttgccagcaaagatgagacgctgctggtccggggggatgccctccttgtc 165 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 164 ctggatcttggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggt 105 Query: 364 cttgccagtgagggtcttaacgaagatctgcat 396 |||||| ||||||||||| || ||||||||||| Sbjct: 104 cttgccggtgagggtcttcacaaagatctgcat 72 Score = 266 bits (134), Expect = 6e-68 Identities = 234/267 (87%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||| |||||||||||||| |||||||| |||| |||||||||||||| Sbjct: 1420 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 1361 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 1360 agctgcttgccggcgaagatgaggcgctgctggtccggggggataccctccttgtcctgg 1301 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| |||||||| |||||||| ||||| || ||||| ||||| || |||||||||||| Sbjct: 1300 atcttggccttcacgttgtcgatcgtgtccgaggactcgacctcaagcgtgatggtcttg 1241 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||||||||| | |||||| | ||| || Sbjct: 1240 ccggtcagggtcttgacgaagatctgcataccacccctgagcctgagcacaaggtggag- 1182 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||||||||||| ||||||||| Sbjct: 1181 ggtggactccttctggacgttgtagtc 1155 Score = 266 bits (134), Expect = 6e-68 Identities = 237/271 (87%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| ||||||||||||| |||||||| || || |||||||| || Sbjct: 1196 gagcacaaggtggagggtggactccttctggacgttgtagtcggcaagggtgcggccgtc 1137 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1136 ctccagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtc 1077 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||||||||||||||| ||||| || ||||| ||||| || |||||||| Sbjct: 1076 ctggatcttggccttcacattgtcgatcgtgtccgaggactcgacctcaagtgtgatggt 1017 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| |||||||| ||||||||||||||||| |||||||| | ||||| | ||| Sbjct: 1016 cttgccagtcagggtcttgacgaagatctgcatacctcccctgagcctaagcacaaggtg 957 Query: 424 caganttggactccttctggatgttgtagtc 454 || |||| |||||||||||||||||||| Sbjct: 956 gag-ggtggattccttctggatgttgtagtc 927 Score = 266 bits (134), Expect = 6e-68 Identities = 237/271 (87%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 740 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 681 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 680 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtc 621 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 620 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggt 561 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| |||||||||||||| || |||||||| | |||||| | ||| Sbjct: 560 cttgccagtcaaggtcttgacgaagatctgcatgcctcccctgagcctgagcacaaggtg 501 Query: 424 caganttggactccttctggatgttgtagtc 454 || | ||||||||||||||||||||||| Sbjct: 500 gag-ggtagactccttctggatgttgtagtc 471 Score = 264 bits (133), Expect = 2e-67 Identities = 230/262 (87%), Gaps = 1/262 (0%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| || ||||||||||| |||||||| || || |||||||| ||||| ||||| Sbjct: 959 gtggagggtggattccttctggatgttgtagtcggcaagggtgcggccgtcctccagctg 900 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| || || |||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 899 cttgccggcgaagatgagacgctgctggtccggggggatgccctccttgtcctggatctt 840 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 |||||||| |||||||| ||||| || ||||| ||||| ||||||||||||||||| || Sbjct: 839 ggccttcacgttgtcgatcgtgtccgaggactcgacctcgagggtgatggtcttgccggt 780 Query: 373 gagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttgg 432 |||||||| ||||||||||||||||| |||||||| | |||||| | ||| || ||| Sbjct: 779 cagggtcttgacgaagatctgcatacctcccctgagcctgagcacaaggtggag-ggtgg 721 Query: 433 actccttctggatgttgtagtc 454 |||||||||||||||||||||| Sbjct: 720 actccttctggatgttgtagtc 699
>gb|U37687.1|OSU37687 Oryza sativa polyubiquitin (Rubq1) mRNA, complete cds Length = 1679 Score = 349 bits (176), Expect = 5e-93 Identities = 279/313 (89%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 142 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 201 |||||||||||||| || |||||| ||||||||||||||||||| |||| |||||| || Sbjct: 1448 agcagctccatggctgaggacttactggccaccacggaggcggaggaccaggtggagtgt 1389 Query: 202 cgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 261 |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1388 ggactccttctggatgttgtaatccgccaaggtgcggccatcctcaagctgcttaccagc 1329 Query: 262 aaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcac 321 |||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1328 aaagatcagacgctgctggtccggggggatgccctccttgtcctggatcttcgccttcac 1269 Query: 322 attgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctt 381 ||||| || ||||| || ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1268 gttgtcaatagtgtcggacgactcaacctcaagggtaatggtcttgccagtcagggtctt 1209 Query: 382 aacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttct 441 |||||||||||||| ||||||||||| | ||| |||| ||| || |||||||||||| Sbjct: 1208 cacgaagatctgcatcccacccctgagcctgagaaccaggtgaag-ggtggactccttct 1150 Query: 442 ggatgttgtagtc 454 ||||||||||||| Sbjct: 1149 ggatgttgtagtc 1137 Score = 297 bits (150), Expect = 2e-77 Identities = 241/271 (88%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 494 gagcacaaggtggagggtggactccttctggatgttgtagtcagccagggtgcggccatc 435 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 434 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtc 375 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 374 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggt 315 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| |||||||||||||| || |||||||| | ||| || | ||| Sbjct: 314 cttgccagtcaaggtcttgacgaagatctgcatgcctcccctgagcctgaggacaaggtg 255 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 254 gag-ggtggactccttctggatgttgtagtc 225 Score = 281 bits (142), Expect = 1e-72 Identities = 239/271 (88%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 722 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 663 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 662 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtc 603 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 602 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcgagggtgatggt 543 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| ||||||||||||||||| |||||||| | |||||| | ||| Sbjct: 542 cttgccagtcaaggtcttgacgaagatctgcatacctcccctgagcctgagcacaaggtg 483 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 482 gag-ggtggactccttctggatgttgtagtc 453 Score = 274 bits (138), Expect = 2e-70 Identities = 235/267 (88%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||| |||||||||||||| |||||||| |||| |||||||||||||| Sbjct: 1174 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 1115 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || || |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 1114 agctgcttgccggcgaagatgagacgctgctggtccggggggatgccctccttgtcctgg 1055 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| |||||||| ||||| || ||||| || ||||||||||| ||||| ||||||||| Sbjct: 1054 atcttcgccttcacgttgtcaatagtgtcggacgactcaacctcaagggtaatggtcttg 995 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 ||||| |||||||| |||||||||||||| ||||||||||| | ||| |||| ||| || Sbjct: 994 ccagtcagggtcttcacgaagatctgcatcccacccctgagcctgagtaccaggtgaag- 936 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 935 ggtggactccttctggatgttgtagtc 909 Score = 272 bits (137), Expect = 9e-70 Identities = 187/204 (91%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 257 gtggagggtggactccttctggatgttgtagtcggccagggtgcggccatcctcaagctg 198 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 197 cttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcctggatctt 138 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 ||||| |||||||| |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 137 ggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggtcttgccggt 78 Query: 373 gagggtcttaacgaagatctgcat 396 ||||||||| || ||||||||||| Sbjct: 77 gagggtcttcacaaagatctgcat 54 Score = 266 bits (134), Expect = 6e-68 Identities = 234/267 (87%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||| |||||||||||||| |||||||| |||| |||||||||||||| Sbjct: 946 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 887 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || || |||||||| |||||||||||||| ||||| ||||||||||||||| Sbjct: 886 agctgcttgccggcgaagatgagacgctgctggtccggggggataccctccttgtcctgg 827 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| || |||||||||||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 826 atcttggctttcacattgtcgatcgtgtccgaggactcgacctcgagggtgatggtcttg 767 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| ||||||||||||||||| |||||||| | |||||| | ||| || Sbjct: 766 ccggtcagggtcttgacgaagatctgcatacctcccctgagcctgagcacaaggtggag- 708 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 707 ggtggactccttctggatgttgtagtc 681
>gb|DQ086482.1| Triticum aestivum ubiquitin (Ubiq) mRNA, partial cds Length = 400 Score = 345 bits (174), Expect = 8e-92 Identities = 236/257 (91%) Strand = Plus / Minus Query: 123 ttgtgagcccagagacataagcagctccatggccaagcacttacaggccaccacggaggc 182 |||||| |||||||||| ||||||||||||||||| | ||||| ||||||||||||| | Sbjct: 257 ttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacggagac 198 Query: 183 ggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccat 242 ||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||| Sbjct: 197 ggagcaccaagtgaagggtggactccttctggatgttgtagtccgccaaggtgcggccat 138 Query: 243 cctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgt 302 |||||||||||||||| ||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 137 cctcaagctgcttaccggcaaagatgagacgctgctggtccgggggaatgccctccttgt 78 Query: 303 cctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatgg 362 |||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 77 cctggatcttcgccttcacgttgtcaatggtgtcagatgactccacctccagggtgatgg 18 Query: 363 tcttgccagtgagggtc 379 ||||||| ||||||||| Sbjct: 17 tcttgccggtgagggtc 1 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 179 tggactccttctggatgttgtagtc 155
>emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 341 bits (172), Expect = 1e-90 Identities = 278/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 142 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 201 |||||||||||||| || |||||| |||||||||||||||| || |||| |||||| || Sbjct: 1439 agcagctccatggctgaggacttactggccaccacggaggcgcagaaccaggtggagtgt 1380 Query: 202 cgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 261 |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1379 ggactccttctggatgttgtaatccgccaaggtgcggccatcctcaagctgcttaccagc 1320 Query: 262 aaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcac 321 |||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1319 aaagatcagacgctgctggtccggggggatgccctccttgtcctggatcttcgccttcac 1260 Query: 322 attgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctt 381 ||||| || ||||| || ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1259 gttgtcaatagtgtcggacgactcaacctcaagggtaatggtcttgccagtcagggtctt 1200 Query: 382 aacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttct 441 |||||||||||||| ||||||||||| | ||| |||| ||| || |||||||||||| Sbjct: 1199 cacgaagatctgcatcccacccctgagcctgagaaccaggtgaag-ggtggactccttct 1141 Query: 442 ggatgttgtagtc 454 ||||||||||||| Sbjct: 1140 ggatgttgtagtc 1128 Score = 305 bits (154), Expect = 7e-80 Identities = 242/271 (89%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 485 gagcacaaggtggagggtggactccttctggatgttgtagtcagccagggtgcggccatc 426 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 425 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtc 366 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 365 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggt 306 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| |||||||||||||| || |||||||| | |||||| | ||| Sbjct: 305 cttgccagtcaaggtcttgacgaagatctgcatgcctcccctgagcctgagcacaaggtg 246 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 245 gag-ggtggactccttctggatgttgtagtc 216 Score = 297 bits (150), Expect = 2e-77 Identities = 241/271 (88%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 941 gagcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccatc 882 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 881 ctccagctgcttgccagcaaagatgagacgctgctggtccggggggatgccctccttgtc 822 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| |||||||| |||||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 821 ctggatcttggccttcacgttgtcgatcgtgtccgaggactcgacctcgagggtgatggt 762 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 |||||| || |||||||| ||||||||||||||||| |||||||| | |||||| | ||| Sbjct: 761 cttgccggtcagggtcttgacgaagatctgcatacctcccctgagcctgagcacaaggtg 702 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 701 gag-ggtggactccttctggatgttgtagtc 672 Score = 274 bits (138), Expect = 2e-70 Identities = 235/267 (88%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||| |||||||||||||| |||||||| |||| |||||||||||||| Sbjct: 1165 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 1106 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || || |||||||| |||||||||||||| ||||| ||||||||||||||| Sbjct: 1105 agctgcttgccggcgaagatgagacgctgctggtccggggggataccctccttgtcctgg 1046 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||||||||| ||||| || ||||| ||||| || |||||||||||| Sbjct: 1045 atcttggccttcacattgtcgatcgtgtccgaggactcgacctcaagcgtgatggtcttg 986 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||||||||| | |||||| | ||| || Sbjct: 985 ccggtcagggtcttgacgaagatctgcataccacccctgagcctgagcacaaggtggag- 927 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 926 ggtggactccttctggatgttgtagtc 900 Score = 274 bits (138), Expect = 2e-70 Identities = 238/271 (87%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 713 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 654 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 653 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtc 594 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 593 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggt 534 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| |||||||||||||| || |||||||| | |||||| | ||| Sbjct: 533 cttgccagtcaaggtcttgacgaagatctgcatgcctcccctgagcctgagcacaaggtg 474 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 473 gag-ggtggactccttctggatgttgtagtc 444 Score = 274 bits (138), Expect = 2e-70 Identities = 194/213 (91%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 257 gagcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatc 198 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 197 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtc 138 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 137 ctggatcttggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggt 78 Query: 364 cttgccagtgagggtcttaacgaagatctgcat 396 |||||| ||||||||||| || ||||||||||| Sbjct: 77 cttgcccgtgagggtcttcacaaagatctgcat 45
>gb|AF184279.1|AF184279 Oryza sativa polyubiquitin (RUBQ1) gene, complete cds Length = 3184 Score = 341 bits (172), Expect = 1e-90 Identities = 278/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 142 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 201 |||||||||||||| || |||||| |||||||||||||||| || |||| |||||| || Sbjct: 3096 agcagctccatggctgaggacttactggccaccacggaggcgcagaaccaggtggagtgt 3037 Query: 202 cgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 261 |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 3036 ggactccttctggatgttgtaatccgccaaggtgcggccatcctcaagctgcttaccagc 2977 Query: 262 aaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcac 321 |||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 2976 aaagatcagacgctgctggtccggggggatgccctccttgtcctggatcttcgccttcac 2917 Query: 322 attgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctt 381 ||||| || ||||| || ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 2916 gttgtcaatagtgtcggacgactcaacctcaagggtaatggtcttgccagtcagggtctt 2857 Query: 382 aacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttct 441 |||||||||||||| ||||||||||| | ||| |||| ||| || |||||||||||| Sbjct: 2856 cacgaagatctgcatcccacccctgagcctgagaaccaggtgaag-ggtggactccttct 2798 Query: 442 ggatgttgtagtc 454 ||||||||||||| Sbjct: 2797 ggatgttgtagtc 2785 Score = 305 bits (154), Expect = 7e-80 Identities = 242/271 (89%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 2142 gagcacaaggtggagggtggactccttctggatgttgtagtcagccagggtgcggccatc 2083 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2082 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtc 2023 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 2022 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggt 1963 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| |||||||||||||| || |||||||| | |||||| | ||| Sbjct: 1962 cttgccagtcaaggtcttgacgaagatctgcatgcctcccctgagcctgagcacaaggtg 1903 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 1902 gag-ggtggactccttctggatgttgtagtc 1873 Score = 297 bits (150), Expect = 2e-77 Identities = 241/271 (88%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 2598 gagcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccatc 2539 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2538 ctccagctgcttgccagcaaagatgagacgctgctggtccggggggatgccctccttgtc 2479 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| || |||||||||||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 2478 ctggatcttggctttcacattgtcgatcgtgtccgaggactcgacctcgagggtgatggt 2419 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 |||||| || |||||||| ||||||||||||||||| |||||||| | |||||| | ||| Sbjct: 2418 cttgccggtcagggtcttgacgaagatctgcatacctcccctgagcctgagcacaaggtg 2359 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 2358 gag-ggtggactccttctggatgttgtagtc 2329 Score = 281 bits (142), Expect = 1e-72 Identities = 236/267 (88%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||| |||||||||||||| |||||||| |||| ||||||||||||||| Sbjct: 2822 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctca 2763 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || || |||||||| |||||||||||||| ||||| ||||||||||||||| Sbjct: 2762 agctgcttgccggcgaagatgagacgctgctggtccggggggataccctccttgtcctgg 2703 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||||||||| ||||| || ||||| ||||| || |||||||||||| Sbjct: 2702 atcttggccttcacattgtcgatcgtgtccgaggactcgacctcaagcgtgatggtcttg 2643 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||||||||| | |||||| | ||| || Sbjct: 2642 ccggtcagggtcttgacgaagatctgcataccacccctgagcctgagcacaaggtggag- 2584 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 2583 ggtggactccttctggatgttgtagtc 2557 Score = 274 bits (138), Expect = 2e-70 Identities = 238/271 (87%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| || || ||||||||||| Sbjct: 2370 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 2311 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| || || |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 2310 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtc 2251 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 2250 ctggatcttggccttgacattgtcaatggtgtcagacgactcgacctcgagggtgatggt 2191 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||||||| | |||||| |||||||||||||| || |||||||| | |||||| | ||| Sbjct: 2190 cttgccagtcaaggtcttgacgaagatctgcatgcctcccctgagcctgagcacaaggtg 2131 Query: 424 caganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 2130 gag-ggtggactccttctggatgttgtagtc 2101 Score = 274 bits (138), Expect = 2e-70 Identities = 194/213 (91%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 1914 gagcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatc 1855 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1854 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtc 1795 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| |||||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 1794 ctggatcttggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggt 1735 Query: 364 cttgccagtgagggtcttaacgaagatctgcat 396 |||||| ||||||||||| || ||||||||||| Sbjct: 1734 cttgccggtgagggtcttcacaaagatctgcat 1702
>gb|AY297059.1| Triticum aestivum ubiquitin (WUB1) mRNA, complete cds Length = 450 Score = 329 bits (166), Expect = 5e-87 Identities = 222/241 (92%) Strand = Plus / Minus Query: 141 aagcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggaggg 200 |||| ||||||| | || |||||||| ||||||||||||| |||||||||||||| |||| Sbjct: 256 aagccgctccattgacaggcacttactggccaccacggagacggagcaccaagtgaaggg 197 Query: 201 tcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccag 260 | |||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| Sbjct: 196 tggactccttctggatgttatagtccgccagggtgcggccatcctcaagctgcttaccag 137 Query: 261 caaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttca 320 | ||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||| Sbjct: 136 cgaagatcaggcgctgctggtccgggggaatgccctccttgtcctggattttcgccttca 77 Query: 321 cattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtct 380 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 76 cattgtcgatggtgtcagaggactcaacctccagggtgatggtcttgccggtgagggtct 17 Query: 381 t 381 | Sbjct: 16 t 16 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||| ||||| Sbjct: 196 tggactccttctggatgttatagtc 172
>emb|X04133.1|HVUBIQR Barley mRNA for ubiquitin polyprecursor fragment Length = 703 Score = 307 bits (155), Expect = 2e-80 Identities = 240/268 (89%), Gaps = 1/268 (0%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||||| |||||| || |||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 267 gagcaccaggtggagagtggactccttctggatgttatagtcagccagggtgcggccatc 208 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 207 ctcgagctgcttgccagcaaagatgaggcgctgctggtccggagggatgccctccttgtc 148 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| || ||||||||||||||||| ||||| |||||||| |||||||| Sbjct: 147 ctggatcttcgccttgacgttgtcgatggtgtcagaggactccacctccagtgtgatggt 88 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 |||||| || |||||||| |||||||||||||| ||||| | ||||||||||||| ||| Sbjct: 87 cttgcccgtcagggtcttcacgaagatctgcatgccaccacgaaggcggagcaccaggtg 28 Query: 424 caganttggactccttctggatgttgta 451 || |||||||||||||||||||||| Sbjct: 27 aag-ggtggactccttctggatgttgta 1 Score = 305 bits (154), Expect = 7e-80 Identities = 287/331 (86%), Gaps = 1/331 (0%) Strand = Plus / Minus Query: 124 tgtgagcccagagacataagcagctccatggccaagcacttacaggccaccacggaggcg 183 ||||| ||| |||||| ||||| | |||| ||| |||||||| ||||||||| ||||| Sbjct: 555 tgtgaaccctgagacagaagcaacgtcatgaccaggcacttacttgccaccacgcaggcg 496 Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 ||||||| ||| ||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 495 aagcaccaggtgaagggtagactccttctggatgttgtagtctgccagagtgcggccatc 436 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 ||| |||||||| || || || |||||||||||||||||||| ||||||||||||||||| Sbjct: 435 ctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctccttgtc 376 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 ||||||||| ||||| || ||||||||||||||||| ||||| |||||||| |||||||| Sbjct: 375 ctggatcttcgccttgacgttgtcgatggtgtcagaggactccacctccagtgtgatggt 316 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 |||||| ||||||||||| ||||| |||||||| || || | || | |||||||| ||| Sbjct: 315 cttgccggtgagggtcttcacgaaaatctgcatgcctccacgaagcctgagcaccaggtg 256 Query: 424 caganttggactccttctggatgttgtagtc 454 ||| ||||||||||||||||||| ||||| Sbjct: 255 gagag-tggactccttctggatgttatagtc 226 Score = 69.9 bits (35), Expect = 7e-09 Identities = 49/54 (90%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgta 222 ||||||||| ||||||||||||| ||| ||||| |||||||||||||| ||||| Sbjct: 54 gccaccacgaaggcggagcaccaggtgaagggtggactccttctggatgttgta 1
>gb|BT016652.1| Zea mays clone Contig485 mRNA sequence Length = 1253 Score = 297 bits (150), Expect = 2e-77 Identities = 250/283 (88%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||||||||||| ||||||||| |||||||||||| ||||||||||| Sbjct: 539 gccacccctgaggcggagcaccaggtggagggtgctctccttctggatgttgtagtccgc 480 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| |||||||||||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 479 cagggtgcggccatcctccagctgcttgccggcgaagatgaggcgctgctggtccggtgg 420 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||| ||||| |||||||| ||||| || || ||||| || Sbjct: 419 gatgccctccttgtcctggatcttggccttgacattgtcaatggtatccgaagactccac 360 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| |||||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 359 ctcaagggtgattgtcttgccagtgagtgtcttcacaaagatctgcatgccacccctgag 300 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgta 451 |||||||||| ||| || || |||||||||||||||||| Sbjct: 299 acggagcaccaggtggag-ggtgctctccttctggatgttgta 258 Score = 264 bits (133), Expect = 2e-67 Identities = 224/255 (87%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | ||| |||||||||| ||||||||| |||||||||||| ||||| ||||| Sbjct: 311 gccacccctgagacggagcaccaggtggagggtgctctccttctggatgttgtaatccgc 252 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || |||||||||||||| |||||||| ||||| ||||| | ||||||||||||||||| Sbjct: 251 aagggtgcggccatcctccagctgcttgccagcgaagatcaaacgctgctggtccggtgg 192 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||| ||||| || |||||||||||||| || ||||| || Sbjct: 191 gatgccctccttgtcctggatcttggccttgacgttgtcgatggtgtctgaagactccac 132 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| ||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 131 ctcgagggtgatagtcttgccagtcagggtcttcacgaagatctgcatgcctcccctgag 72 Query: 409 gcggagcaccangtg 423 ||| ||||||| ||| Sbjct: 71 gcgcagcaccaagtg 57 Score = 260 bits (131), Expect = 4e-66 Identities = 223/254 (87%) Strand = Plus / Minus Query: 161 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttg 220 |||||| | |||||||||||||||||||||| ||||||||| |||||| ||||| ||| Sbjct: 1003 acttactgaccaccacggaggcggagcaccaggtggagggtgctctccttttggatgttg 944 Query: 221 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 280 ||||| || | |||||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 943 tagtctgctaaggtgcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 884 Query: 281 tccggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat 340 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 883 tccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatggtgtccgag 824 Query: 341 gactcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatacca 400 ||||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||| Sbjct: 823 ctctcaacctccagggttatggtttttccagtcagggtcttcacaaagatctgcatacca 764 Query: 401 cccctgaggcggag 414 |||||||||||||| Sbjct: 763 cccctgaggcggag 750 Score = 240 bits (121), Expect = 3e-60 Identities = 218/250 (87%), Gaps = 1/250 (0%) Strand = Plus / Minus Query: 205 ctccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 264 |||||||||||| ||||||||||| || ||||| |||||||| |||||||| |||||||| Sbjct: 731 ctccttctggatgttgtagtccgcgagggtgcgaccatcctccagctgcttgccagcaaa 672 Query: 265 gatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcacatt 324 ||| || ||||||||||| || || ||||||||||||||||||||||| ||||||||||| Sbjct: 671 gatcagacgctgctggtctgggggaatgccctccttgtcctggatcttggccttcacatt 612 Query: 325 gtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtcttaac 384 ||| ||||||||||| ||| ||||||| |||||||||||||||||| | ||||| || Sbjct: 611 gtcaatggtgtcagagctctccacctccaaggtgatggtcttgccagtcaatgtcttcac 552 Query: 385 gaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctgga 444 || |||||||| |||||||||||||||||||||| ||| || || ||||||||||| Sbjct: 551 aaaaatctgcatgccacccctgaggcggagcaccaggtggag-ggtgctctccttctgga 493 Query: 445 tgttgtagtc 454 |||||||||| Sbjct: 492 tgttgtagtc 483 Score = 50.1 bits (25), Expect = 0.006 Identities = 51/60 (85%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||||||||||||| | ||||||||| |||||||| ||||| ||||| Sbjct: 74 gaggcgcagcaccaagtggagggtgctcagcttctggatgttgtagtcggccagcgtgcg 15
>ref|XM_473982.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 295 bits (149), Expect = 6e-77 Identities = 231/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| |||||||||||||| ||||| || || || ||||| ||||||||||||||||| Sbjct: 884 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 825 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 824 ccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatcttggcc 765 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 764 ttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccggtgagg 705 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| ||||||||||||||||| || | |||||||| |||| ||||| | ||||||| Sbjct: 704 gtcttcacgaagatctgcatacctccacgaaggcggaggaccaagtgca-aggtggactc 646 Query: 437 cttctggatgttgtagtc 454 |||||||||||| ||||| Sbjct: 645 cttctggatgttatagtc 628 Score = 287 bits (145), Expect = 2e-74 Identities = 248/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||| || || | ||| ||||| |||||||||||||| || ||||| || Sbjct: 1139 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 1080 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 1079 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 1020 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 1019 atgccctccttatcctggatcttggccttcacgttgtcgatggtgtcagaggactcaacc 960 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| |||||||||||||||||||||||||| ||||||||||||||||| || | ||| Sbjct: 959 tccagagtgatggtcttgccagtgagggtcttcacgaagatctgcatacctccacgaagg 900 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgta 451 || || || | |||||| |||||||||||||||||||||| Sbjct: 899 cgcaggacaaggtgcag-ggtggactccttctggatgttgta 859 Score = 272 bits (137), Expect = 9e-70 Identities = 246/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| |||||||| | ||| |||||||||||||| || ||||| || || Sbjct: 680 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 621 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| || Sbjct: 620 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtggaata 561 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 560 ccctccttgtcctggatcttggccttcacattgtcgatcgtgtcagaggactcaacctcc 501 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgg 412 | |||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||| Sbjct: 500 aaggtgatcgtcttgccagtaagggtcttcacaaagatctgcataccgccccggaggcgc 441 Query: 413 agcaccangtgcaganttggactccttctggatgttgtagtc 454 || || | |||||| |||| ||||| |||||||||||||| Sbjct: 440 aggacaaggtgcag-ggtggattccttttggatgttgtagtc 400 Score = 230 bits (116), Expect = 3e-57 Identities = 234/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||| || || | ||| ||||| || ||||| ||||| |||||||| || || ||| Sbjct: 449 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 390 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| ||| Sbjct: 389 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggattccc 330 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| ||||||||||| ||||| ||||| || ||||| ||||||||| Sbjct: 329 tccttgtcctggatcttggccttcacattatcgatcgtgtcggaggactcgacctccagg 270 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagc 415 || ||||||||||| ||||||||||| ||||| || ||||| || || | |||||||| Sbjct: 269 gtaatggtcttgccggtgagggtcttcacgaatatttgcatgcctccacgaaggcggagg 210 Query: 416 accangtgcaganttggactccttctggatgtt 448 || | ||||| | ||||||||||||||||||| Sbjct: 209 acaaggtgca-aggtggactccttctggatgtt 178 Score = 224 bits (113), Expect = 2e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| || | ||| | ||| |||||||||||||| || || ||||| ||| Sbjct: 224 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 165 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 164 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 105 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||| ||||| |||||||||||||| || || || || ||||||||||| Sbjct: 104 ccctccttgtcctgaatcttagccttcacattgtcaatcgtatcggagaactcaacctcc 45 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 44 aaggtgatggtcttgccagtgagggtcttaacgaatatctgcat 1 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||| ||||| Sbjct: 1108 tggactccttctggatgttatagtc 1084
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 295 bits (149), Expect = 6e-77 Identities = 231/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| |||||||||||||| ||||| || || || ||||| ||||||||||||||||| Sbjct: 31998554 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 31998495 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 31998494 ccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatcttggcc 31998435 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 31998434 ttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccggtgagg 31998375 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| ||||||||||||||||| || | |||||||| |||| ||||| | ||||||| Sbjct: 31998374 gtcttcacgaagatctgcatacctccacgaaggcggaggaccaagtgca-aggtggactc 31998316 Query: 437 cttctggatgttgtagtc 454 |||||||||||| ||||| Sbjct: 31998315 cttctggatgttatagtc 31998298 Score = 287 bits (145), Expect = 2e-74 Identities = 248/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||| || || | ||| ||||| |||||||||||||| || ||||| || Sbjct: 31998809 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 31998750 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 31998749 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 31998690 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 31998689 atgccctccttatcctggatcttggccttcacgttgtcgatggtgtcagaggactcaacc 31998630 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| |||||||||||||||||||||||||| ||||||||||||||||| || | ||| Sbjct: 31998629 tccagagtgatggtcttgccagtgagggtcttcacgaagatctgcatacctccacgaagg 31998570 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgta 451 || || || | |||||| |||||||||||||||||||||| Sbjct: 31998569 cgcaggacaaggtgcag-ggtggactccttctggatgttgta 31998529 Score = 272 bits (137), Expect = 9e-70 Identities = 246/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| |||||||| | ||| |||||||||||||| || ||||| || || Sbjct: 31998350 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 31998291 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| || Sbjct: 31998290 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtggaata 31998231 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 31998230 ccctccttgtcctggatcttggccttcacattgtcgatcgtgtcagaggactcaacctcc 31998171 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgg 412 | |||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||| Sbjct: 31998170 aaggtgatcgtcttgccagtaagggtcttcacaaagatctgcataccgccccggaggcgc 31998111 Query: 413 agcaccangtgcaganttggactccttctggatgttgtagtc 454 || || | |||||| |||| ||||| |||||||||||||| Sbjct: 31998110 aggacaaggtgcag-ggtggattccttttggatgttgtagtc 31998070 Score = 230 bits (116), Expect = 3e-57 Identities = 234/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||| || || | ||| ||||| || ||||| ||||| |||||||| || || ||| Sbjct: 31998119 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 31998060 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| ||| Sbjct: 31998059 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggattccc 31998000 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| ||||||||||| ||||| ||||| || ||||| ||||||||| Sbjct: 31997999 tccttgtcctggatcttggccttcacattatcgatcgtgtcggaggactcgacctccagg 31997940 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagc 415 || ||||||||||| ||||||||||| ||||| || ||||| || || | |||||||| Sbjct: 31997939 gtaatggtcttgccggtgagggtcttcacgaatatttgcatgcctccacgaaggcggagg 31997880 Query: 416 accangtgcaganttggactccttctggatgtt 448 || | ||||| | ||||||||||||||||||| Sbjct: 31997879 acaaggtgca-aggtggactccttctggatgtt 31997848 Score = 224 bits (113), Expect = 2e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| || | ||| | ||| |||||||||||||| || || ||||| ||| Sbjct: 31997894 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 31997835 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 31997834 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 31997775 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||| ||||| |||||||||||||| || || || || ||||||||||| Sbjct: 31997774 ccctccttgtcctgaatcttagccttcacattgtcaatcgtatcggagaactcaacctcc 31997715 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31997714 aaggtgatggtcttgccagtgagggtcttaacgaatatctgcat 31997671 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||| ||||| Sbjct: 31998778 tggactccttctggatgttatagtc 31998754 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ccatggccaagcacttacag 168 |||||||||||||||||||| Sbjct: 964158 ccatggccaagcacttacag 964139
>dbj|AK102389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092E11, full insert sequence Length = 2497 Score = 295 bits (149), Expect = 6e-77 Identities = 231/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| |||||||||||||| ||||| || || || ||||| ||||||||||||||||| Sbjct: 2093 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 2034 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 2033 ccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatcttggcc 1974 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1973 ttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccggtgagg 1914 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| ||||||||||||||||| || | |||||||| |||| ||||| | ||||||| Sbjct: 1913 gtcttcacgaagatctgcatacctccacgaaggcggaggaccaagtgca-aggtggactc 1855 Query: 437 cttctggatgttgtagtc 454 |||||||||||| ||||| Sbjct: 1854 cttctggatgttatagtc 1837 Score = 287 bits (145), Expect = 2e-74 Identities = 248/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||| || || | ||| ||||| |||||||||||||| || ||||| || Sbjct: 2348 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 2289 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 2288 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 2229 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 2228 atgccctccttatcctggatcttggccttcacgttgtcgatggtgtcagaggactcaacc 2169 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| |||||||||||||||||||||||||| ||||||||||||||||| || | ||| Sbjct: 2168 tccagagtgatggtcttgccagtgagggtcttcacgaagatctgcatacctccacgaagg 2109 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgta 451 || || || | |||||| |||||||||||||||||||||| Sbjct: 2108 cgcaggacaaggtgcag-ggtggactccttctggatgttgta 2068 Score = 272 bits (137), Expect = 9e-70 Identities = 246/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| |||||||| | ||| |||||||||||||| || ||||| || || Sbjct: 1889 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 1830 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| || Sbjct: 1829 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtggaata 1770 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 1769 ccctccttgtcctggatcttggccttcacattgtcgatcgtgtcagaggactcaacctcc 1710 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgg 412 | |||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||| Sbjct: 1709 aaggtgatcgtcttgccagtaagggtcttcacaaagatctgcataccgccccggaggcgc 1650 Query: 413 agcaccangtgcaganttggactccttctggatgttgtagtc 454 || || | |||||| |||| ||||| |||||||||||||| Sbjct: 1649 aggacaaggtgcag-ggtggattccttttggatgttgtagtc 1609 Score = 224 bits (113), Expect = 2e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| || | ||| | ||| |||||||||||||| || || ||||| ||| Sbjct: 1434 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 1375 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 1374 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 1315 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||| ||||| |||||||||||||| || || || || ||||||||||| Sbjct: 1314 ccctccttgtcctgaatcttagccttcacattgtcaatcgtatcggagaactcaacctcc 1255 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1254 aaggtgatggtcttgccagtgagggtcttaacgaatatctgcat 1211 Score = 214 bits (108), Expect = 2e-52 Identities = 233/273 (85%), Gaps = 2/273 (0%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||| || || | ||| ||||| || ||||| ||||| |||||||| || || ||| Sbjct: 1658 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 1599 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| |||||||||||||| |||||||| || |||||||| ||| Sbjct: 1598 cggccatcctcgagctgcttcccagcaaagatgagacgctgctg-tctggtgggattccc 1540 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| ||||||||||| ||||| ||||| || ||||| ||||||||| Sbjct: 1539 tccttgtcctggatcttggccttcacattatcgatcgtgtcggaggactcgacctccagg 1480 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagc 415 || ||||||||||| ||||||||||| ||||| || ||||| || || | |||||||| Sbjct: 1479 gtaatggtcttgccggtgagggtcttcacgaatatttgcatgcctccacgaaggcggagg 1420 Query: 416 accangtgcaganttggactccttctggatgtt 448 || | ||||| | ||||||||||||||||||| Sbjct: 1419 acaaggtgca-aggtggactccttctggatgtt 1388 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||| ||||| Sbjct: 2317 tggactccttctggatgttatagtc 2293
>dbj|D12776.1|RICPOLYUBI Oryza sativa (japonica cultivar-group) mRNA for poly-ubiquitin, partial cds Length = 744 Score = 295 bits (149), Expect = 6e-77 Identities = 231/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| |||||||||||||| ||||| || || || ||||| ||||||||||||||||| Sbjct: 308 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 249 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 248 ccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatcttggcc 189 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 188 ttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccggtgagg 129 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| ||||||||||||||||| || | |||||||| |||| ||||| | ||||||| Sbjct: 128 gtcttcacgaagatctgcatacctccacgaaggcggaggaccaagtgca-aggtggactc 70 Query: 437 cttctggatgttgtagtc 454 |||||||||||| ||||| Sbjct: 69 cttctggatgttatagtc 52 Score = 287 bits (145), Expect = 2e-74 Identities = 248/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||| || || | ||| ||||| |||||||||||||| || ||||| || Sbjct: 563 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 504 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 503 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 444 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 443 atgccctccttatcctggatcttggccttcacgttgtcgatggtgtcagaggactcaacc 384 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| |||||||||||||||||||||||||| ||||||||||||||||| || | ||| Sbjct: 383 tccagagtgatggtcttgccagtgagggtcttcacgaagatctgcatacctccacgaagg 324 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgta 451 || || || | |||||| |||||||||||||||||||||| Sbjct: 323 cgcaggacaaggtgcag-ggtggactccttctggatgttgta 283 Score = 97.6 bits (49), Expect = 3e-17 Identities = 90/104 (86%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| |||||||| | ||| |||||||||||||| || ||||| || || Sbjct: 104 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 45 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctg 276 |||||||| |||||||||||||| ||||| |||||||| ||||| Sbjct: 44 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctg 1 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||| ||||| Sbjct: 532 tggactccttctggatgttatagtc 508
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 295 bits (149), Expect = 6e-77 Identities = 231/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| |||||||||||||| ||||| || || || ||||| ||||||||||||||||| Sbjct: 19261 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 19202 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 19201 ccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatcttggcc 19142 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 19141 ttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccggtgagg 19082 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| ||||||||||||||||| || | |||||||| |||| ||||| | ||||||| Sbjct: 19081 gtcttcacgaagatctgcatacctccacgaaggcggaggaccaagtgca-aggtggactc 19023 Query: 437 cttctggatgttgtagtc 454 |||||||||||| ||||| Sbjct: 19022 cttctggatgttatagtc 19005 Score = 287 bits (145), Expect = 2e-74 Identities = 248/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||| || || | ||| ||||| |||||||||||||| || ||||| || Sbjct: 19516 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 19457 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 19456 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 19397 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 19396 atgccctccttatcctggatcttggccttcacgttgtcgatggtgtcagaggactcaacc 19337 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| |||||||||||||||||||||||||| ||||||||||||||||| || | ||| Sbjct: 19336 tccagagtgatggtcttgccagtgagggtcttcacgaagatctgcatacctccacgaagg 19277 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgta 451 || || || | |||||| |||||||||||||||||||||| Sbjct: 19276 cgcaggacaaggtgcag-ggtggactccttctggatgttgta 19236 Score = 272 bits (137), Expect = 9e-70 Identities = 246/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| |||||||| | ||| |||||||||||||| || ||||| || || Sbjct: 19057 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 18998 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| || Sbjct: 18997 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtggaata 18938 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 18937 ccctccttgtcctggatcttggccttcacattgtcgatcgtgtcagaggactcaacctcc 18878 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgg 412 | |||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||| Sbjct: 18877 aaggtgatcgtcttgccagtaagggtcttcacaaagatctgcataccgccccggaggcgc 18818 Query: 413 agcaccangtgcaganttggactccttctggatgttgtagtc 454 || || | |||||| |||| ||||| |||||||||||||| Sbjct: 18817 aggacaaggtgcag-ggtggattccttttggatgttgtagtc 18777 Score = 230 bits (116), Expect = 3e-57 Identities = 234/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||| || || | ||| ||||| || ||||| ||||| |||||||| || || ||| Sbjct: 18826 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 18767 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| ||| Sbjct: 18766 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggattccc 18707 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| ||||||||||| ||||| ||||| || ||||| ||||||||| Sbjct: 18706 tccttgtcctggatcttggccttcacattatcgatcgtgtcggaggactcgacctccagg 18647 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagc 415 || ||||||||||| ||||||||||| ||||| || ||||| || || | |||||||| Sbjct: 18646 gtaatggtcttgccggtgagggtcttcacgaatatttgcatgcctccacgaaggcggagg 18587 Query: 416 accangtgcaganttggactccttctggatgtt 448 || | ||||| | ||||||||||||||||||| Sbjct: 18586 acaaggtgca-aggtggactccttctggatgtt 18555 Score = 224 bits (113), Expect = 2e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| || | ||| | ||| |||||||||||||| || || ||||| ||| Sbjct: 18601 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 18542 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 18541 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 18482 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||| ||||| |||||||||||||| || || || || ||||||||||| Sbjct: 18481 ccctccttgtcctgaatcttagccttcacattgtcaatcgtatcggagaactcaacctcc 18422 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 18421 aaggtgatggtcttgccagtgagggtcttaacgaatatctgcat 18378 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||| ||||| Sbjct: 19485 tggactccttctggatgttatagtc 19461
>ref|XM_506723.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.28 mRNA Length = 1642 Score = 293 bits (148), Expect = 3e-76 Identities = 251/285 (88%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||| || ||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 1221 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1162 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 1161 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1102 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| Sbjct: 1101 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 1042 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| ||||||||||| || ||||||||||||||||| | ||| Sbjct: 1041 tccagggtgatggtcttgcctgtgagggtcttgacaaagatctgcataccaccacgaagg 982 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | ||| || | |||||||||||||||||||||||| Sbjct: 981 cggagcacaaggtggagggt-ggactccttctggatgttgtagtc 938 Score = 285 bits (144), Expect = 6e-74 Identities = 250/285 (87%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||| || Sbjct: 993 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 934 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 933 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 874 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||| Sbjct: 873 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 814 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 || ||||||||||||||||| || || ||||| |||||||| ||||| || |||||||| Sbjct: 813 tcgagggtgatggtcttgccggtcagagtcttcacgaagatttgcatgcctcccctgaga 754 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || | ||| || || ||||||||||||||||||||||| Sbjct: 753 cggaggacaaggtgaagcgtt-gactccttctggatgttgtagtc 710 Score = 254 bits (128), Expect = 2e-64 Identities = 246/285 (86%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 1449 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1390 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| || || Sbjct: 1389 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 1330 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||||||||| ||||||||||| || |||||||| || ||||||| Sbjct: 1329 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 1270 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||| ||||| | |||||| |||||||||||||||||||| | ||| Sbjct: 1269 tccaaagtgatggtcttcccagtcaaggtcttcacgaagatctgcataccaccacggaga 1210 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||| || | ||||||||||||||||||||||| Sbjct: 1209 cgaagcaccaggtggag-ggtagactccttctggatgttgtagtc 1166 Score = 240 bits (121), Expect = 3e-60 Identities = 245/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||||||||| |||||||||||||| |||||||| || Sbjct: 538 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 479 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 478 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 419 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| || Sbjct: 418 gatgccctctttgtcctggatcttggccttgacgttgtcgatggtgtcagaagactccac 359 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| |||||||| || || ||||| || ||||||||||| ||||| | ||| Sbjct: 358 ctcaagggtgatagtcttgccggtcagagtcttgacaaagatctgcatgccaccacggag 299 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| || | ||| || | ||||||||||||||||||||||| Sbjct: 298 gcggaggacaaggtgaag-ggtcgactccttctggatgttgtagtc 254 Score = 228 bits (115), Expect = 1e-56 Identities = 218/252 (86%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 732 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 673 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 |||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 672 aagatgagacgctgctggtccgggggaatgccctccttgtcctggatcttggccttgacg 613 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 ||||||||||||||||| || || ||||| ||||||||||||||||| || || ||||| Sbjct: 612 ttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccggtcagtgtcttg 553 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 || ||||||||||| ||||| | ||||||||| || | ||| || ||||||||||||| Sbjct: 552 acaaagatctgcatgccaccacggaggcggaggacaaggtggag-ggtggactccttctg 494 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 493 gatgttgtagtc 482 Score = 216 bits (109), Expect = 5e-53 Identities = 198/228 (86%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||| |||||||||||||||||||| |||||||| || Sbjct: 310 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 251 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 250 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 191 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| || |||||||| ||||| ||||| |||||||||||||| ||||| || Sbjct: 190 gatgccctccttatcttggatcttagccttgacattatcgatggtgtcagaggactccac 131 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| |||||||| || | ||||| || ||||||||||| Sbjct: 130 ctcgagggtgatagtcttgccggtcaatgtcttcacaaagatctgcat 83 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| | |||||||||||||| ||| || ||||||||||||||||||||||||| Sbjct: 1450 accaccacggaggcggagcaccaggtggag-ggtggactccttctggatgttgtagtc 1394
>ref|XM_464194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1640 Score = 293 bits (148), Expect = 3e-76 Identities = 251/285 (88%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||| || ||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 1218 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1159 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 1158 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1099 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| Sbjct: 1098 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 1039 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| ||||||||||| || ||||||||||||||||| | ||| Sbjct: 1038 tccagggtgatggtcttgcctgtgagggtcttgacaaagatctgcataccaccacgaagg 979 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | ||| || ||||||||||||||||||||||||| Sbjct: 978 cggagcacaaggtggag-ggtggactccttctggatgttgtagtc 935 Score = 285 bits (144), Expect = 6e-74 Identities = 250/285 (87%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||| || Sbjct: 990 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 931 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 930 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 871 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||| Sbjct: 870 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 811 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 || ||||||||||||||||| || || ||||| |||||||| ||||| || |||||||| Sbjct: 810 tcgagggtgatggtcttgccggtcagagtcttcacgaagatttgcatgcctcccctgaga 751 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || | ||| || || ||||||||||||||||||||||| Sbjct: 750 cggaggacaaggtgaagcgtt-gactccttctggatgttgtagtc 707 Score = 254 bits (128), Expect = 2e-64 Identities = 246/285 (86%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 1446 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1387 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| || || Sbjct: 1386 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 1327 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||||||||| ||||||||||| || |||||||| || ||||||| Sbjct: 1326 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 1267 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||| ||||| | |||||| |||||||||||||||||||| | ||| Sbjct: 1266 tccaaagtgatggtcttcccagtcaaggtcttcacgaagatctgcataccaccacggaga 1207 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||| || | ||||||||||||||||||||||| Sbjct: 1206 cgaagcaccaggtggag-ggtagactccttctggatgttgtagtc 1163 Score = 240 bits (121), Expect = 3e-60 Identities = 245/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||||||||| |||||||||||||| |||||||| || Sbjct: 535 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 476 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 475 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 416 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| || Sbjct: 415 gatgccctctttgtcctggatcttggccttgacgttgtcgatggtgtcagaagactccac 356 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| |||||||| || || ||||| || ||||||||||| ||||| | ||| Sbjct: 355 ctcaagggtgatagtcttgccggtcagagtcttgacaaagatctgcatgccaccacggag 296 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| || | ||| || | ||||||||||||||||||||||| Sbjct: 295 gcggaggacaaggtgaag-ggtcgactccttctggatgttgtagtc 251 Score = 228 bits (115), Expect = 1e-56 Identities = 218/252 (86%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 729 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 670 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 |||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 669 aagatgagacgctgctggtccgggggaatgccctccttgtcctggatcttggccttgacg 610 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 ||||||||||||||||| || || ||||| ||||||||||||||||| || || ||||| Sbjct: 609 ttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccggtcagtgtcttg 550 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 || ||||||||||| ||||| | ||||||||| || | ||| || ||||||||||||| Sbjct: 549 acaaagatctgcatgccaccacggaggcggaggacaaggtggag-ggtggactccttctg 491 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 490 gatgttgtagtc 479 Score = 216 bits (109), Expect = 5e-53 Identities = 198/228 (86%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||| |||||||||||||||||||| |||||||| || Sbjct: 307 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 248 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 247 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 188 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| || |||||||| ||||| ||||| |||||||||||||| ||||| || Sbjct: 187 gatgccctccttatcttggatcttagccttgacattatcgatggtgtcagaggactccac 128 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| |||||||| || | ||||| || ||||||||||| Sbjct: 127 ctcgagggtgatagtcttgccggtcaatgtcttcacaaagatctgcat 80 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| | |||||||||||||| ||| || ||||||||||||||||||||||||| Sbjct: 1447 accaccacggaggcggagcaccaggtggag-ggtggactccttctggatgttgtagtc 1391
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 293 bits (148), Expect = 3e-76 Identities = 251/285 (88%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||| || ||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 3340877 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 3340936 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 3340937 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 3340996 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| Sbjct: 3340997 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 3341056 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| ||||||||||| || ||||||||||||||||| | ||| Sbjct: 3341057 tccagggtgatggtcttgcctgtgagggtcttgacaaagatctgcataccaccacgaagg 3341116 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | ||| || ||||||||||||||||||||||||| Sbjct: 3341117 cggagcacaaggtggag-ggtggactccttctggatgttgtagtc 3341160 Score = 285 bits (144), Expect = 6e-74 Identities = 250/285 (87%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||| || Sbjct: 3341105 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 3341164 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 3341165 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 3341224 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||| Sbjct: 3341225 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 3341284 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 || ||||||||||||||||| || || ||||| |||||||| ||||| || |||||||| Sbjct: 3341285 tcgagggtgatggtcttgccggtcagagtcttcacgaagatttgcatgcctcccctgaga 3341344 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || | ||| || || ||||||||||||||||||||||| Sbjct: 3341345 cggaggacaaggtgaagcgtt-gactccttctggatgttgtagtc 3341388 Score = 254 bits (128), Expect = 2e-64 Identities = 246/285 (86%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 3340649 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 3340708 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| || || Sbjct: 3340709 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 3340768 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||||||||| ||||||||||| || |||||||| || ||||||| Sbjct: 3340769 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 3340828 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||| ||||| | |||||| |||||||||||||||||||| | ||| Sbjct: 3340829 tccaaagtgatggtcttcccagtcaaggtcttcacgaagatctgcataccaccacggaga 3340888 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||| || | ||||||||||||||||||||||| Sbjct: 3340889 cgaagcaccaggtggag-ggtagactccttctggatgttgtagtc 3340932 Score = 240 bits (121), Expect = 3e-60 Identities = 245/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Plus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||||||||| |||||||||||||| |||||||| || Sbjct: 3341560 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 3341619 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 3341620 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 3341679 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| || Sbjct: 3341680 gatgccctctttgtcctggatcttggccttgacgttgtcgatggtgtcagaagactccac 3341739 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| |||||||| || || ||||| || ||||||||||| ||||| | ||| Sbjct: 3341740 ctcaagggtgatagtcttgccggtcagagtcttgacaaagatctgcatgccaccacggag 3341799 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| || | ||| || | ||||||||||||||||||||||| Sbjct: 3341800 gcggaggacaaggtgaag-ggtcgactccttctggatgttgtagtc 3341844 Score = 228 bits (115), Expect = 1e-56 Identities = 218/252 (86%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 3341366 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 3341425 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 |||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 3341426 aagatgagacgctgctggtccgggggaatgccctccttgtcctggatcttggccttgacg 3341485 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 ||||||||||||||||| || || ||||| ||||||||||||||||| || || ||||| Sbjct: 3341486 ttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccggtcagtgtcttg 3341545 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 || ||||||||||| ||||| | ||||||||| || | ||| || ||||||||||||| Sbjct: 3341546 acaaagatctgcatgccaccacggaggcggaggacaaggtggag-ggtggactccttctg 3341604 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 3341605 gatgttgtagtc 3341616 Score = 216 bits (109), Expect = 5e-53 Identities = 198/228 (86%) Strand = Plus / Plus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||| |||||||||||||||||||| |||||||| || Sbjct: 3341788 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 3341847 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 3341848 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 3341907 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| || |||||||| ||||| ||||| |||||||||||||| ||||| || Sbjct: 3341908 gatgccctccttatcttggatcttagccttgacattatcgatggtgtcagaggactccac 3341967 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| |||||||| || | ||||| || ||||||||||| Sbjct: 3341968 ctcgagggtgatagtcttgccggtcaatgtcttcacaaagatctgcat 3342015 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| | |||||||||||||| ||| || ||||||||||||||||||||||||| Sbjct: 3340648 accaccacggaggcggagcaccaggtggag-ggtggactccttctggatgttgtagtc 3340704
>gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 Score = 293 bits (148), Expect = 3e-76 Identities = 251/285 (88%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||| || ||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 3924 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggca 3865 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 3864 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 3805 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| Sbjct: 3804 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 3745 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| ||||||||||| || ||||||||||||||||| | ||| Sbjct: 3744 tccagggtgatggtcttgcctgtgagggtcttgacaaagatctgcataccaccacgaagg 3685 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | ||| || ||||||||||||||||||||||||| Sbjct: 3684 cggagcacaaggtggag-ggtggactccttctggatgttgtagtc 3641 Score = 285 bits (144), Expect = 6e-74 Identities = 250/285 (87%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||| || Sbjct: 3696 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 3637 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 3636 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 3577 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||| Sbjct: 3576 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 3517 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 || ||||||||||||||||| || || ||||| |||||||| ||||| || |||||||| Sbjct: 3516 tcgagggtgatggtcttgccggtcagagtcttcacgaagatttgcatgcctcccctgaga 3457 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || | ||| || || ||||||||||||||||||||||| Sbjct: 3456 cggaggacaaggtgaagcgtt-gactccttctggatgttgtagtc 3413 Score = 254 bits (128), Expect = 2e-64 Identities = 246/285 (86%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 4152 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 4093 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| || || Sbjct: 4092 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 4033 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||||||||| ||||||||||| || |||||||| || ||||||| Sbjct: 4032 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 3973 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||| ||||| | |||||| |||||||||||||||||||| | ||| Sbjct: 3972 tccaaagtgatggtcttcccagtcaaggtcttcacgaagatctgcataccaccacggaga 3913 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||| || | ||||||||||||||||||||||| Sbjct: 3912 cgaagcaccaggtggag-ggtagactccttctggatgttgtagtc 3869 Score = 240 bits (121), Expect = 3e-60 Identities = 245/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||||||||| |||||||||||||| |||||||| || Sbjct: 3241 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 3182 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 3181 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 3122 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| || Sbjct: 3121 gatgccctctttgtcctggatcttggccttgacgttgtcgatggtgtcagaagactccac 3062 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| |||||||| || || ||||| || ||||||||||| ||||| | ||| Sbjct: 3061 ctcaagggtgatagtcttgccggtcagagtcttgacaaagatctgcatgccaccacggag 3002 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| || | ||| || | ||||||||||||||||||||||| Sbjct: 3001 gcggaggacaaggtgaag-ggtcgactccttctggatgttgtagtc 2957 Score = 228 bits (115), Expect = 1e-56 Identities = 218/252 (86%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 3435 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 3376 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 |||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 3375 aagatgagacgctgctggtccgggggaatgccctccttgtcctggatcttggccttgacg 3316 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 ||||||||||||||||| || || ||||| ||||||||||||||||| || || ||||| Sbjct: 3315 ttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccggtcagtgtcttg 3256 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 || ||||||||||| ||||| | ||||||||| || | ||| || ||||||||||||| Sbjct: 3255 acaaagatctgcatgccaccacggaggcggaggacaaggtggag-ggtggactccttctg 3197 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 3196 gatgttgtagtc 3185 Score = 216 bits (109), Expect = 5e-53 Identities = 198/228 (86%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||| |||||||||||||||||||| |||||||| || Sbjct: 3013 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 2954 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 2953 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 2894 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| || |||||||| ||||| ||||| |||||||||||||| ||||| || Sbjct: 2893 gatgccctccttatcttggatcttagccttgacattatcgatggtgtcagaggactccac 2834 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| |||||||| || | ||||| || ||||||||||| Sbjct: 2833 ctcgagggtgatagtcttgccggtcaatgtcttcacaaagatctgcat 2786 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| | |||||||||||||| ||| || ||||||||||||||||||||||||| Sbjct: 4153 accaccacggaggcggagcaccaggtggag-ggtggactccttctggatgttgtagtc 4097
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 293 bits (148), Expect = 3e-76 Identities = 251/285 (88%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||| || ||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 89737 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 89796 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 89797 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 89856 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| Sbjct: 89857 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 89916 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| ||||||||||| || ||||||||||||||||| | ||| Sbjct: 89917 tccagggtgatggtcttgcctgtgagggtcttgacaaagatctgcataccaccacgaagg 89976 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | ||| || ||||||||||||||||||||||||| Sbjct: 89977 cggagcacaaggtggag-ggtggactccttctggatgttgtagtc 90020 Score = 285 bits (144), Expect = 6e-74 Identities = 250/285 (87%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||| || Sbjct: 89965 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 90024 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 90025 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 90084 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||| Sbjct: 90085 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 90144 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 || ||||||||||||||||| || || ||||| |||||||| ||||| || |||||||| Sbjct: 90145 tcgagggtgatggtcttgccggtcagagtcttcacgaagatttgcatgcctcccctgaga 90204 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || | ||| || || ||||||||||||||||||||||| Sbjct: 90205 cggaggacaaggtgaagcgtt-gactccttctggatgttgtagtc 90248 Score = 254 bits (128), Expect = 2e-64 Identities = 246/285 (86%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 89509 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 89568 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| || || Sbjct: 89569 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 89628 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||||||||| ||||||||||| || |||||||| || ||||||| Sbjct: 89629 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 89688 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||| ||||| | |||||| |||||||||||||||||||| | ||| Sbjct: 89689 tccaaagtgatggtcttcccagtcaaggtcttcacgaagatctgcataccaccacggaga 89748 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||| || | ||||||||||||||||||||||| Sbjct: 89749 cgaagcaccaggtggag-ggtagactccttctggatgttgtagtc 89792 Score = 240 bits (121), Expect = 3e-60 Identities = 245/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Plus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||||||||| |||||||||||||| |||||||| || Sbjct: 90420 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 90479 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 90480 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 90539 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| || Sbjct: 90540 gatgccctctttgtcctggatcttggccttgacgttgtcgatggtgtcagaagactccac 90599 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| |||||||| || || ||||| || ||||||||||| ||||| | ||| Sbjct: 90600 ctcaagggtgatagtcttgccggtcagagtcttgacaaagatctgcatgccaccacggag 90659 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| || | ||| || | ||||||||||||||||||||||| Sbjct: 90660 gcggaggacaaggtgaag-ggtcgactccttctggatgttgtagtc 90704 Score = 228 bits (115), Expect = 1e-56 Identities = 218/252 (86%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 90226 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 90285 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 |||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 90286 aagatgagacgctgctggtccgggggaatgccctccttgtcctggatcttggccttgacg 90345 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 ||||||||||||||||| || || ||||| ||||||||||||||||| || || ||||| Sbjct: 90346 ttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccggtcagtgtcttg 90405 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 || ||||||||||| ||||| | ||||||||| || | ||| || ||||||||||||| Sbjct: 90406 acaaagatctgcatgccaccacggaggcggaggacaaggtggag-ggtggactccttctg 90464 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 90465 gatgttgtagtc 90476 Score = 216 bits (109), Expect = 5e-53 Identities = 198/228 (86%) Strand = Plus / Plus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||| |||||||||||||||||||| |||||||| || Sbjct: 90648 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 90707 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 90708 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 90767 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| || |||||||| ||||| ||||| |||||||||||||| ||||| || Sbjct: 90768 gatgccctccttatcttggatcttagccttgacattatcgatggtgtcagaggactccac 90827 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| |||||||| || | ||||| || ||||||||||| Sbjct: 90828 ctcgagggtgatagtcttgccggtcaatgtcttcacaaagatctgcat 90875 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| | |||||||||||||| ||| || ||||||||||||||||||||||||| Sbjct: 89508 accaccacggaggcggagcaccaggtggag-ggtggactccttctggatgttgtagtc 89564
>dbj|AK101547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M20, full insert sequence Length = 1642 Score = 293 bits (148), Expect = 3e-76 Identities = 251/285 (88%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||| || ||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 1221 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1162 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 1161 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1102 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| Sbjct: 1101 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 1042 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| ||||||||||| || ||||||||||||||||| | ||| Sbjct: 1041 tccagggtgatggtcttgcctgtgagggtcttgacaaagatctgcataccaccacgaagg 982 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | ||| || | |||||||||||||||||||||||| Sbjct: 981 cggagcacaaggtggagggt-ggactccttctggatgttgtagtc 938 Score = 285 bits (144), Expect = 6e-74 Identities = 250/285 (87%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||| || Sbjct: 993 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 934 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 933 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 874 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||| Sbjct: 873 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 814 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 || ||||||||||||||||| || || ||||| |||||||| ||||| || |||||||| Sbjct: 813 tcgagggtgatggtcttgccggtcagagtcttcacgaagatttgcatgcctcccctgaga 754 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || | ||| || || ||||||||||||||||||||||| Sbjct: 753 cggaggacaaggtgaagcgtt-gactccttctggatgttgtagtc 710 Score = 254 bits (128), Expect = 2e-64 Identities = 246/285 (86%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 1449 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1390 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| || || Sbjct: 1389 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 1330 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||||||||| ||||||||||| || |||||||| || ||||||| Sbjct: 1329 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 1270 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||| ||||| | |||||| |||||||||||||||||||| | ||| Sbjct: 1269 tccaaagtgatggtcttcccagtcaaggtcttcacgaagatctgcataccaccacggaga 1210 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||| || | ||||||||||||||||||||||| Sbjct: 1209 cgaagcaccaggtggag-ggtagactccttctggatgttgtagtc 1166 Score = 240 bits (121), Expect = 3e-60 Identities = 245/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||||||||| |||||||||||||| |||||||| || Sbjct: 538 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 479 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 478 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 419 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| || Sbjct: 418 gatgccctctttgtcctggatcttggccttgacgttgtcgatggtgtcagaagactccac 359 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| |||||||| || || ||||| || ||||||||||| ||||| | ||| Sbjct: 358 ctcaagggtgatagtcttgccggtcagagtcttgacaaagatctgcatgccaccacggag 299 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| || | ||| || | ||||||||||||||||||||||| Sbjct: 298 gcggaggacaaggtgaag-ggtcgactccttctggatgttgtagtc 254 Score = 228 bits (115), Expect = 1e-56 Identities = 218/252 (86%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 732 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 673 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 |||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 672 aagatgagacgctgctggtccgggggaatgccctccttgtcctggatcttggccttgacg 613 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 ||||||||||||||||| || || ||||| ||||||||||||||||| || || ||||| Sbjct: 612 ttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccggtcagtgtcttg 553 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 || ||||||||||| ||||| | ||||||||| || | ||| || ||||||||||||| Sbjct: 552 acaaagatctgcatgccaccacggaggcggaggacaaggtggag-ggtggactccttctg 494 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 493 gatgttgtagtc 482 Score = 216 bits (109), Expect = 5e-53 Identities = 198/228 (86%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||| |||||||||||||||||||| |||||||| || Sbjct: 310 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 251 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 250 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 191 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| || |||||||| ||||| ||||| |||||||||||||| ||||| || Sbjct: 190 gatgccctccttatcttggatcttagccttgacattatcgatggtgtcagaggactccac 131 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| |||||||| || | ||||| || ||||||||||| Sbjct: 130 ctcgagggtgatagtcttgccggtcaatgtcttcacaaagatctgcat 83 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| | |||||||||||||| ||| || ||||||||||||||||||||||||| Sbjct: 1450 accaccacggaggcggagcaccaggtggag-ggtggactccttctggatgttgtagtc 1394
>dbj|AK061956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F08, full insert sequence Length = 1640 Score = 293 bits (148), Expect = 3e-76 Identities = 251/285 (88%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||| || ||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 1218 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1159 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 1158 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1099 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| Sbjct: 1098 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 1039 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| ||||||||||| || ||||||||||||||||| | ||| Sbjct: 1038 tccagggtgatggtcttgcctgtgagggtcttgacaaagatctgcataccaccacgaagg 979 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | ||| || ||||||||||||||||||||||||| Sbjct: 978 cggagcacaaggtggag-ggtggactccttctggatgttgtagtc 935 Score = 285 bits (144), Expect = 6e-74 Identities = 250/285 (87%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||| || Sbjct: 990 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 931 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 930 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 871 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||| Sbjct: 870 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 811 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 || ||||||||||||||||| || || ||||| |||||||| ||||| || |||||||| Sbjct: 810 tcgagggtgatggtcttgccggtcagagtcttcacgaagatttgcatgcctcccctgaga 751 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || | ||| || || ||||||||||||||||||||||| Sbjct: 750 cggaggacaaggtgaagcgtt-gactccttctggatgttgtagtc 707 Score = 254 bits (128), Expect = 2e-64 Identities = 246/285 (86%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 1446 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1387 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| || || Sbjct: 1386 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 1327 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||||||||| ||||||||||| || |||||||| || ||||||| Sbjct: 1326 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 1267 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||| ||||| | |||||| |||||||||||||||||||| | ||| Sbjct: 1266 tccaaagtgatggtcttcccagtcaaggtcttcacgaagatctgcataccaccacggaga 1207 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||| || | ||||||||||||||||||||||| Sbjct: 1206 cgaagcaccaggtggag-ggtagactccttctggatgttgtagtc 1163 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||||||||| |||||||||||||| |||||||| || Sbjct: 535 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 476 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 475 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 416 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 | ||||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| || Sbjct: 415 ggtgccctctttgtcctggatcttggccttgacgttgtcgatggtgtcagaagactccac 356 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| |||||||| || || ||||| || ||||||||||| ||||| | ||| Sbjct: 355 ctcaagggtgatagtcttgccggtcagagtcttgacaaagatctgcatgccaccacggag 296 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| || | ||| || | ||||||||||||||||||||||| Sbjct: 295 gcggaggacaaggtgaag-ggtcgactccttctggatgttgtagtc 251 Score = 228 bits (115), Expect = 1e-56 Identities = 218/252 (86%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 729 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 670 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 |||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 669 aagatgagacgctgctggtccgggggaatgccctccttgtcctggatcttggccttgacg 610 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 ||||||||||||||||| || || ||||| ||||||||||||||||| || || ||||| Sbjct: 609 ttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccggtcagtgtcttg 550 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 || ||||||||||| ||||| | ||||||||| || | ||| || ||||||||||||| Sbjct: 549 acaaagatctgcatgccaccacggaggcggaggacaaggtggag-ggtggactccttctg 491 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 490 gatgttgtagtc 479 Score = 216 bits (109), Expect = 5e-53 Identities = 198/228 (86%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||| |||||||||||||||||||| |||||||| || Sbjct: 307 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 248 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 247 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 188 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| || |||||||| ||||| ||||| |||||||||||||| ||||| || Sbjct: 187 gatgccctccttatcttggatcttagccttgacattatcgatggtgtcagaggactccac 128 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| |||||||| || | ||||| || ||||||||||| Sbjct: 127 ctcgagggtgatagtcttgccggtcaatgtcttcacaaagatctgcat 80 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| | |||||||||||||| ||| || ||||||||||||||||||||||||| Sbjct: 1447 accaccacggaggcggagcaccaggtggag-ggtggactccttctggatgttgtagtc 1391
>gb|AY954394.1| Oryza sativa (japonica cultivar-group) polyubiquitin (rubi3) gene, promoter region and complete cds Length = 3733 Score = 287 bits (145), Expect = 2e-74 Identities = 248/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||| || || | ||| ||||| |||||||||||||| || ||||| || Sbjct: 3655 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 3596 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 3595 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 3536 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 3535 atgccctccttatcctggatcttggccttcacgttgtcgatggtgtcagaggactcaacc 3476 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| |||||||||||||||||||||||||| ||||||||||||||||| || | ||| Sbjct: 3475 tccagagtgatggtcttgccagtgagggtcttcacgaagatctgcatacctccacgaagg 3416 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgta 451 || || || | |||||| |||||||||||||||||||||| Sbjct: 3415 cgcaggacaaggtgcag-ggtggactccttctggatgttgta 3375 Score = 287 bits (145), Expect = 2e-74 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| |||||||||||||| ||||| || || || ||||| ||||||||||||||||| Sbjct: 3400 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 3341 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| |||| ||||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 3340 ccagcgaagacgaggcgctgctggtctggtggaataccctccttgtcctggatcttggcc 3281 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 3280 ttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccggtgagg 3221 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| ||||||||||||||||| || | |||||||| |||| ||||| | ||||||| Sbjct: 3220 gtcttcacgaagatctgcatacctccacgaaggcggaggaccaagtgca-aggtggactc 3162 Query: 437 cttctggatgttgtagtc 454 |||||||||||| ||||| Sbjct: 3161 cttctggatgttatagtc 3144 Score = 272 bits (137), Expect = 9e-70 Identities = 246/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| |||||||| | ||| |||||||||||||| || ||||| || || Sbjct: 3196 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 3137 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| || Sbjct: 3136 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtggaata 3077 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 3076 ccctccttgtcctggatcttggccttcacattgtcgatcgtgtcagaggactcaacctcc 3017 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgg 412 | |||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||| Sbjct: 3016 aaggtgatcgtcttgccagtaagggtcttcacaaagatctgcataccgccccggaggcgc 2957 Query: 413 agcaccangtgcaganttggactccttctggatgttgtagtc 454 || || | |||||| |||| ||||| |||||||||||||| Sbjct: 2956 aggacaaggtgcag-ggtggattccttttggatgttgtagtc 2916 Score = 230 bits (116), Expect = 3e-57 Identities = 234/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||| || || | ||| ||||| || ||||| ||||| |||||||| || || ||| Sbjct: 2965 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 2906 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| ||| Sbjct: 2905 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggattccc 2846 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| ||||||||||| ||||| ||||| || ||||| ||||||||| Sbjct: 2845 tccttgtcctggatcttggccttcacattatcgatcgtgtcggaggactcgacctccagg 2786 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagc 415 || ||||||||||| ||||||||||| ||||| || ||||| || || | |||||||| Sbjct: 2785 gtaatggtcttgccggtgagggtcttcacgaatatttgcatgcctccacgaaggcggagg 2726 Query: 416 accangtgcaganttggactccttctggatgtt 448 || | ||||| | ||||||||||||||||||| Sbjct: 2725 acaaggtgca-aggtggactccttctggatgtt 2694 Score = 224 bits (113), Expect = 2e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| || | ||| | ||| |||||||||||||| || || ||||| ||| Sbjct: 2740 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 2681 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 2680 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 2621 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||| ||||| |||||||||||||| || || || || ||||||||||| Sbjct: 2620 ccctccttgtcctgaatcttagccttcacattgtcaatcgtatcggagaactcaacctcc 2561 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2560 aaggtgatggtcttgccagtgagggtcttaacgaatatctgcat 2517 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||| ||||| Sbjct: 3624 tggactccttctggatgttatagtc 3600
>dbj|AK058319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A10, full insert sequence Length = 1421 Score = 287 bits (145), Expect = 2e-74 Identities = 248/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||| || || | ||| ||||| |||||||||||||| || ||||| || Sbjct: 1206 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 1147 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 1146 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 1087 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 1086 atgccctccttatcctggatcttggccttcacgttgtcgatggtgtcagaggactcaacc 1027 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| |||||||||||||||||||||||||| ||||||||||||||||| || | ||| Sbjct: 1026 tccagagtgatggtcttgccagtgagggtcttcacgaagatctgcatacctccacgaagg 967 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgta 451 || || || | |||||| |||||||||||||||||||||| Sbjct: 966 cgcaggacaaggtgcag-ggtggactccttctggatgttgta 926 Score = 287 bits (145), Expect = 2e-74 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| |||||||||||||| ||||| || || || ||||| ||||||||||||||||| Sbjct: 951 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 892 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 891 ccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatcttggcc 832 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||||||||| |||||||| ||||||||| ||||||||||||||||||| |||||| Sbjct: 831 ttcacattgtcgatcgtgtcagacgactcaacccccagggtgatggtcttgccggtgagg 772 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| ||||||||||||||||| || | |||||||| |||| ||||| | ||||||| Sbjct: 771 gtcttcacgaagatctgcatacctccacgaaggcggaggaccaagtgca-aggtggactc 713 Query: 437 cttctggatgttgtagtc 454 |||||||||||| ||||| Sbjct: 712 cttctggatgttatagtc 695 Score = 272 bits (137), Expect = 9e-70 Identities = 246/282 (87%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| |||||||| | ||| |||||||||||||| || ||||| || || Sbjct: 747 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 688 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| || Sbjct: 687 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtggaata 628 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 627 ccctccttgtcctggatcttggccttcacattgtcgatcgtgtcagaggactcaacctcc 568 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgg 412 | |||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||| Sbjct: 567 aaggtgatcgtcttgccagtaagggtctttacaaagatctgcataccgccccggaggcgc 508 Query: 413 agcaccangtgcaganttggactccttctggatgttgtagtc 454 || || | |||||| |||| ||||| |||||||||||||| Sbjct: 507 aggacaaggtgcag-ggtggattccttttggatgttgtagtc 467 Score = 230 bits (116), Expect = 3e-57 Identities = 234/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||| || || | ||| ||||| || ||||| ||||| |||||||| || || ||| Sbjct: 516 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 457 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| ||| Sbjct: 456 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggattccc 397 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| ||||||||||| ||||| ||||| || ||||| ||||||||| Sbjct: 396 tccttgtcctggatcttggccttcacattatcgatcgtgtcggaggactcgacctccagg 337 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagc 415 || ||||||||||| ||||||||||| ||||| || ||||| || || | |||||||| Sbjct: 336 gtaatggtcttgccggtgagggtcttcacgaatatttgcatgcctccacgaaggcggagg 277 Query: 416 accangtgcaganttggactccttctggatgtt 448 || | ||||| | ||||||||||||||||||| Sbjct: 276 acaaggtgca-aggtggactccttctggatgtt 245 Score = 224 bits (113), Expect = 2e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| || | ||| | ||| |||||||||||||| || || ||||| ||| Sbjct: 291 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 232 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 231 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 172 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||| ||||| |||||||||||||| || || || || ||||||||||| Sbjct: 171 ccctccttgtcctgaatcttagccttcacattgtcaatcgtatcggagaactcaacctcc 112 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111 aaggtgatggtcttgccagtgagggtcttaacgaatatctgcat 68 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||| ||||| Sbjct: 1175 tggactccttctggatgttatagtc 1151
>gb|S94464.1| polyubiquitin [maize, Genomic, 3841 nt] Length = 3841 Score = 281 bits (142), Expect = 1e-72 Identities = 248/283 (87%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||||||||||| |||||| || |||||||||||| ||||| ||||| Sbjct: 3133 gccacccctgaggcggagcaccaggtggagagtgctctccttctggatgttgtaatccgc 3074 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| |||||||||||||| |||||||| || || |||||||||||||||||||| ||||| Sbjct: 3073 cagggtgcggccatcctccagctgcttgccggcgaagatgaggcgctgctggtcgggtgg 3014 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||| ||||| |||||||| ||||| || || ||||| || Sbjct: 3013 gatgccctccttgtcctggatcttggccttgacattgtcaatggtatccgaagactccac 2954 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| |||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 2953 ctcaagggtgattgtcttgccagtgagtgtcttcacaaagatctgcataccacccctgag 2894 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgta 451 |||||||||| ||| || || |||||||||||||||||| Sbjct: 2893 acggagcaccaggtggag-ggtgctctccttctggatgttgta 2852 Score = 270 bits (136), Expect = 4e-69 Identities = 239/273 (87%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||||||||| |||||||||||| ||||| ||||| || ||||||||| Sbjct: 2892 cggagcaccaggtggagggtgctctccttctggatgttgtaatccgcaagggtgcggcca 2833 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 ||||| |||||||| ||||| ||||| | |||||||||||||||||||||||||||||| Sbjct: 2832 tcctccagctgcttgccagcgaagatcaaacgctgctggtccggtgggatgccctccttg 2773 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||| ||||||||||||||||| || ||||| ||||| |||||||| Sbjct: 2772 tcctggatcttggccttgacattgtcgatggtgtctgaagactccacctcgagggtgata 2713 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| || ||||||||||| ||||||| | Sbjct: 2712 gtcttgccggtcagggtcttcacgaagatctgcatgcctcccctgaggcgcagcaccaag 2653 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 || || || ||||||||||||||||||||| Sbjct: 2652 tggag-ggtgctctccttctggatgttgtagtc 2621 Score = 262 bits (132), Expect = 9e-67 Identities = 241/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||||||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 2668 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 2609 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || |||||||||||||| |||||||||||||| ||||||||||| || || |||||||| Sbjct: 2608 cccgtcctcaagctgctttccagcaaagatgagccgctgctggtctgggggaatgccctc 2549 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || |||||||||||||| || ||||| ||||| ||||| Sbjct: 2548 cttgtcctggatcttggccttgacgttgtcgatggtgtctgaagactccacctcgagggt 2489 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||| |||||||| || |||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 2488 gatagtcttgccggtcagggtcttcacgaagatctgcatgcctcccctgaggcgcagcac 2429 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||| || || ||||||||||||||||||||| Sbjct: 2428 caagtggag-ggtgctctccttctggatgttgtagtc 2393 Score = 250 bits (126), Expect = 3e-63 Identities = 217/247 (87%), Gaps = 1/247 (0%) Strand = Plus / Minus Query: 205 ctccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 264 |||||||||||| ||||||||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 3325 ctccttctggatgttgtagtccgcgagagtgcggccatcctccagctgcttgcccgcaaa 3266 Query: 265 gatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcacatt 324 ||| || ||||||||||| || || ||||||||||||||||||||||| ||||||||||| Sbjct: 3265 gatcagacgctgctggtctgggggaatgccctccttgtcctggatcttggccttcacatt 3206 Query: 325 gtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtcttaac 384 ||| ||||||||||| ||| ||||||| |||||||||||||||||| | ||||| || Sbjct: 3205 gtcaatggtgtcagagctctccacctccaaggtgatggtcttgccagtcaatgtcttcac 3146 Query: 385 gaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctgga 444 || |||||||| |||||||||||||||||||||| ||| ||| || ||||||||||| Sbjct: 3145 aaaaatctgcatgccacccctgaggcggagcaccaggtggagag-tgctctccttctgga 3087 Query: 445 tgttgta 451 ||||||| Sbjct: 3086 tgttgta 3080 Score = 248 bits (125), Expect = 1e-62 Identities = 252/294 (85%), Gaps = 1/294 (0%) Strand = Plus / Minus Query: 161 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttg 220 |||||| | ||||||||||| |||||||| | ||||||||| |||||| ||||| ||| Sbjct: 3597 acttactgaccaccacggagacggagcacaaggtggagggtgctctccttttggatgttg 3538 Query: 221 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 280 ||||| || || |||||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 3537 tagtctgctagggtgcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 3478 Query: 281 tccggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat 340 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 3477 tccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatggtgtccgag 3418 Query: 341 gactcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatacca 400 ||||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||| Sbjct: 3417 ctctcaacctccagggttatggtttttccagtcagggtctttacaaagatctgcatacca 3358 Query: 401 cccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || ||||||||||| || | ||| || || ||||||||||||||||||||| Sbjct: 3357 cctctgaggcggagaacaaggtgaag-ggtgctctccttctggatgttgtagtc 3305 Score = 246 bits (124), Expect = 5e-62 Identities = 239/277 (86%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||||||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 2440 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 2381 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || |||||||||||||| |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 2380 cccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatgccctc 2321 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 2320 cttgtcctggatcttggccttgacgttgtcaatggtgtcagaggactccacctcgagggt 2261 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||| |||||||| || ||||| || || ||||||||||| || |||||||| |||||||| Sbjct: 2260 gatagtcttgccggtcagggttttcacaaagatctgcatgcctcccctgagacggagcac 2201 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 | ||| || || ||||||||||||||||||||| Sbjct: 2200 aaggtggag-ggtgctctccttctggatgttgtagtc 2165 Score = 206 bits (104), Expect = 5e-50 Identities = 187/215 (86%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||| | ||||||||| |||||||||||| |||||||| || || ||||| || Sbjct: 2208 cggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcgcccg 2149 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 ||||||||||| || |||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 2148 tcctcaagctgtttgccagcaaagatgagccgctgctggtctggggggatgccctccttg 2089 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 2088 tcctggatcttggccttaacgttgtcaatggtgtcagacgactccacctcgagggtgata 2029 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| ||||| || || ||||||||||| Sbjct: 2028 gtcttgccagtcagggttttcacaaagatctgcat 1994
>gb|BT016665.1| Zea mays clone Contig498 mRNA sequence Length = 1012 Score = 280 bits (141), Expect = 4e-72 Identities = 241/274 (87%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 181 gcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcc 240 ||||||||||| ||||||||| |||||||||||| |||||||| || || || ||||| Sbjct: 522 gcggagcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggcc 463 Query: 241 atcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcctt 300 |||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 462 atcctccagctgcttgccagcaaagatcaggcgctgctggtccggagggatgccctcctt 403 Query: 301 gtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgat 360 |||||||||||| ||||| || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 402 gtcctggatcttggccttgacgttgtcgatggtgtcagaagactccacctcgagggtgat 343 Query: 361 ggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccan 420 ||||| |||||||||||||| |||||||||||||| || |||||||||||||| || | Sbjct: 342 agtctttccagtgagggtcttgacgaagatctgcatgcctcccctgaggcggagaacaag 283 Query: 421 gtgcaganttggactccttctggatgttgtagtc 454 ||| || || ||||||||||||||||||||| Sbjct: 282 gtggag-ggtgctctccttctggatgttgtagtc 250 Score = 238 bits (120), Expect = 1e-59 Identities = 244/285 (85%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||| |||||||||||||||| |||||| || |||||||||||| |||||||| || Sbjct: 761 ccaccgcggaggcggagcaccaggtggagagtgctctccttctggatgttgtagtctgct 702 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || ||||| || ||||||||||| || ||| Sbjct: 701 agggtgcggccatcctccagctgcttgccggcgaagatcagacgctgctggtctgggggg 642 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 |||||||| |||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 641 atgccctctttgtcctggatcttcgccttcacgttgtcgatggtgtcggagctctcaacc 582 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||| |||||||||||||| | |||||| || ||||||||||||||||| | | | Sbjct: 581 tccagggttatggtcttgccagtcaaggtcttcacaaagatctgcataccacctcgcaag 522 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||| ||| || || ||||||||||||||||||||| Sbjct: 521 cggagcaccaggtggag-ggtgctctccttctggatgttgtagtc 478 Score = 198 bits (100), Expect = 1e-47 Identities = 189/219 (86%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| || | ||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 297 gaggcggagaacaaggtggagggtgctctccttctggatgttgtagtcggcaagtgtgcg 238 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || ||||| |||||||| ||||| |||||||| |||||||||||||| || ||||| || Sbjct: 237 cccgtcctcgagctgcttgccagcgaagatgagccgctgctggtccgggggaatgccttc 178 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 177 cttgtcctggatcttggccttgacgttgtcaatggtgtcagaggactccacctcgagggt 118 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 117 gatagtctttccagtgagagtcttgacgaagatctgcat 79 Score = 48.1 bits (24), Expect = 0.025 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| | |||||||||||||| ||| ||| | | ||||||||||||||||||||| Sbjct: 762 accaccgcggaggcggagcaccaggtggagagt-gctctccttctggatgttgtagtc 706
>dbj|AB003731.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 2817 Score = 278 bits (140), Expect = 2e-71 Identities = 243/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||||||||| Sbjct: 2324 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcagacagagtgcg 2265 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 2264 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 2205 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 2204 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 2145 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 2144 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 2085 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 2084 caggtgcag-ggtggactccttctggatgttgtagtc 2049 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2552 gaggcggaggaccaggtgcagggtagactccttctggatgttgtagtcggacagggtgcg 2493 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 2492 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 2433 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 2432 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 2373 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 2372 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 2313 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 2312 caggtgcag-ggtggactccttctggatgttgtagtc 2277 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1868 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 1809 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 1808 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 1749 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 1748 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 1689 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1688 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 1629 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1628 caggtgcag-ggtggactccttctggatgttgtagtc 1593 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1640 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 1581 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 1580 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 1521 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 1520 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 1461 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1460 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 1401 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1400 caggtgcag-ggtggactccttctggatgttgtagtc 1365 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1412 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 1353 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 1352 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 1293 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 1292 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 1233 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1232 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 1173 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1172 caggtgcag-ggtggactccttctggatgttgtagtc 1137 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1184 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 1125 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 1124 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 1065 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 1064 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 1005 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1004 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 945 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 944 caggtgcag-ggtggactccttctggatgttgtagtc 909 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 956 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 897 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 896 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 837 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 836 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 777 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 776 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 717 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 716 caggtgcag-ggtggactccttctggatgttgtagtc 681 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 728 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 669 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 668 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 609 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 608 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 549 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 548 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 489 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 488 caggtgcag-ggtggactccttctggatgttgtagtc 453 Score = 262 bits (132), Expect = 9e-67 Identities = 241/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2096 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 2037 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 2036 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 1977 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 1976 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 1917 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||| ||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1916 gatggttttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 1857 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1856 caggtgcag-ggtggactccttctggatgttgtagtc 1821 Score = 262 bits (132), Expect = 9e-67 Identities = 241/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 500 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 441 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 440 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 381 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 380 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 321 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||| ||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 320 gatggttttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 261 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 260 caggtgcag-ggtggactccttctggatgttgtagtc 225 Score = 206 bits (104), Expect = 5e-50 Identities = 190/219 (86%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 272 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 213 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 212 gccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctc 153 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 152 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 93 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| ||||| || |||||||| || ||||||||||| Sbjct: 92 gatggttttgcctgtcagggtcttcacaaagatctgcat 54 Score = 131 bits (66), Expect = 2e-27 Identities = 101/112 (90%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 343 ctcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacc 402 ||||||||||||||||||||||||||| || |||||||| || ||||||||||| ||||| Sbjct: 2615 ctcaacctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacc 2556 Query: 403 cctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||| |||| |||||| | ||||||||||||||||||||||| Sbjct: 2555 cctgaggcggaggaccaggtgcag-ggtagactccttctggatgttgtagtc 2505
>gb|AY290730.1| Triticum aestivum ubiquitin-like mRNA, partial sequence Length = 510 Score = 274 bits (138), Expect = 2e-70 Identities = 200/221 (90%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||||| ||||||||| |||||||||||||| |||||||| || || ||| Sbjct: 386 cggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcgagggtg 327 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 326 cggccgtcctcgagctgcttaccggcgaagatgaggcgctgctggtccggcgggatgccc 267 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| ||||| || |||||||||||||| || ||||| |||||||| Sbjct: 266 tccttgtcctggatcttggccttgacgttgtcgatggtgtccgaggactccacctccagc 207 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||| || |||||||| |||||||||||||| Sbjct: 206 gtgatggtcttgcccgtcagggtcttcacgaagatctgcat 166 Score = 54.0 bits (27), Expect = 4e-04 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| || | |||||||||||||||||||||||| Sbjct: 384 gaggcggagcaccaggtggagggt-ggactccttctggatgttgtagtc 337
>gb|BT016436.1| Zea mays clone Contig269 mRNA sequence Length = 990 Score = 272 bits (137), Expect = 9e-70 Identities = 240/274 (87%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 181 gcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcc 240 ||||||||||| ||||||||| |||||||||||| |||||||| || || || ||||| Sbjct: 481 gcggagcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggcc 422 Query: 241 atcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcctt 300 |||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 421 atcctccagctgcttgccagcaaagatcaggcgctgctggtccggtggaatgccctcctt 362 Query: 301 gtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgat 360 |||||||||||| || || ||||| ||||| |||||||| ||||| ||||||| |||||| Sbjct: 361 gtcctggatcttggctttgacattatcgattgtgtcagacgactccacctccaaggtgat 302 Query: 361 ggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccan 420 |||||||||||| | ||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 301 ggtcttgccagtcaatgtcttcacaaagatctgcatgccacccctgaggcggagcaccaa 242 Query: 421 gtgcaganttggactccttctggatgttgtagtc 454 ||| || || ||||||||||||||||||||| Sbjct: 241 gtggag-ggtgctctccttctggatgttgtagtc 209 Score = 240 bits (121), Expect = 3e-60 Identities = 221/255 (86%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||||||||||||||||||||| |||||||||||| |||||||| || Sbjct: 265 gccacccctgaggcggagcaccaagtggagggtgctctccttctggatgttgtagtcagc 206 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||| |||||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 205 caaggtgcgaccatcctccagctgcttgccggcgaagatgagccgctgctggtccggtgg 146 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||| || || || ||||| |||||||| || ||||| || Sbjct: 145 gatgccctccttgtcctggatcttggcattgacgttgtcaatggtgtctgaggactccac 86 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| ||||||||||| || ||||| ||||| ||||||| ||||||||||| Sbjct: 85 ctcaagggtgatcgtcttgccagtaagagtcttctcgaaggtctgcatgccacccctgag 26 Query: 409 gcggagcaccangtg 423 || ||||||| ||| Sbjct: 25 acgcagcaccaagtg 11 Score = 238 bits (120), Expect = 1e-59 Identities = 244/285 (85%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||| |||||||||||||||| |||||| || |||||||||||| |||||||| || Sbjct: 720 ccaccgcggaggcggagcaccaggtggagagtgctctccttctggatgttgtagtctgct 661 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || ||||| || ||||||||||| || ||| Sbjct: 660 agggtgcggccatcctccagctgcttgccggcgaagatcagacgctgctggtctgggggg 601 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 |||||||| |||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 600 atgccctctttgtcctggatcttcgccttcacgttgtcgatggtgtcggagctctcaacc 541 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||| |||||||||||||| | |||||| || ||||||||||||||||| | | | Sbjct: 540 tccagggttatggtcttgccagtcaaggtcttcacaaagatctgcataccacctcgcaag 481 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||| ||| || || ||||||||||||||||||||| Sbjct: 480 cggagcaccaggtggag-ggtgctctccttctggatgttgtagtc 437 Score = 48.1 bits (24), Expect = 0.025 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| | |||||||||||||| ||| ||| | | ||||||||||||||||||||| Sbjct: 721 accaccgcggaggcggagcaccaggtggagagt-gctctccttctggatgttgtagtc 665
>gb|BT016403.1| Zea mays clone Contig236 mRNA sequence Length = 1019 Score = 272 bits (137), Expect = 9e-70 Identities = 237/270 (87%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||||||||||||| |||||||||||| ||||| || || || || ||||||||| Sbjct: 601 agcaccaagtggagggtgctctccttctggatgttgtaatctgcaagggtacggccatcc 542 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 541 tccagctgcttgccagcaaagatgagccgctgctggtccggtggaatgccctccttgtcc 482 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 |||||||| ||||| ||||||||||||||||| || ||||| ||||| |||||||| ||| Sbjct: 481 tggatcttggccttgacattgtcgatggtgtccgaggactccacctcaagggtgatcgtc 422 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgc 424 |||||||| || ||||| |||||||||||||| ||||||||||| || ||||||| ||| Sbjct: 421 ttgccagtaagtgtcttcacgaagatctgcatgccacccctgagacgcagcaccaagtgg 362 Query: 425 aganttggactccttctggatgttgtagtc 454 || || ||||||||||||||||||||| Sbjct: 361 ag-ggtgctctccttctggatgttgtagtc 333 Score = 256 bits (129), Expect = 6e-65 Identities = 244/282 (86%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||| |||||||||||||||||||||||||| |||||||||||| |||||||| ||| Sbjct: 844 ccaccgcggaggcggagcaccaagtggagggtgctctccttctggatgttgtagtcagcc 785 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 | ||||| |||||||| |||||||| || || ||||| || ||||||||||||||||| Sbjct: 784 aaggtgcgaccatcctccagctgcttgccggcgaagatcagccgctgctggtccggtgga 725 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| || ||||| |||||||| || ||||| ||| Sbjct: 724 atgccctccttgtcctggatcttggccttgacgttgtcaatggtgtctgaggactccacc 665 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 || |||||||| ||||||||||| || ||||| |||||||||||||| ||||||||||| Sbjct: 664 tcaagggtgatcgtcttgccagtaagagtcttcacgaagatctgcatgccacccctgaga 605 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgta 451 || ||||||| ||| || || |||||||||||||||||| Sbjct: 604 cgcagcaccaagtggag-ggtgctctccttctggatgttgta 564 Score = 232 bits (117), Expect = 8e-58 Identities = 232/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||||||||||||| |||||||||||| |||||||| || || |||||||||||| Sbjct: 373 agcaccaagtggagggtgctctccttctggatgttgtagtctgctagggtgcggccatcc 314 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || |||||||| || || ||||| || ||||||||||| || ||||||||||| |||||| Sbjct: 313 tccagctgcttgccggcgaagatcagacgctgctggtctggggggatgccctctttgtcc 254 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 |||||||| |||||||| |||||||||||||| || ||||||||||||||| |||||| Sbjct: 253 tggatcttcgccttcacgttgtcgatggtgtcggagctctcaacctccagggttatggtc 194 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgc 424 |||||||| | |||||| || ||||||||||||||||| | | ||||||||||| ||| Sbjct: 193 ttgccagtcaaggtcttcacaaagatctgcataccacctcgcaagcggagcaccaggtgg 134 Query: 425 aganttggactccttctggatgttgtagtc 454 || || ||||||||||||||||||||| Sbjct: 133 ag-ggtgctctccttctggatgttgtagtc 105 Score = 163 bits (82), Expect = 6e-37 Identities = 132/149 (88%) Strand = Plus / Minus Query: 181 gcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcc 240 ||||||||||| ||||||||| |||||||||||| |||||||| || || || ||||| Sbjct: 149 gcggagcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggcc 90 Query: 241 atcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcctt 300 |||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 89 atcctccagctgcttgccagcaaagatcaggcgctgctggtccggtggaatgccctcctt 30 Query: 301 gtcctggatctttgccttcacattgtcga 329 |||||||||||| || || ||||| |||| Sbjct: 29 gtcctggatcttggctttgacattatcga 1 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 ctccttctggatgttgtagtc 454 ||||||||||||||||||||| Sbjct: 809 ctccttctggatgttgtagtc 789
>gb|S94466.1| polyubiquitin [maize, Genomic, 3439 nt] Length = 3439 Score = 272 bits (137), Expect = 9e-70 Identities = 240/274 (87%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 181 gcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcc 240 ||||||||||| ||||||||| |||||||||||| |||||||| || || || ||||| Sbjct: 3005 gcggagcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggcc 2946 Query: 241 atcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcctt 300 |||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 2945 atcctccagctgcttgccagcaaagatcaggcgctgctggtccggtggaatgccctcctt 2886 Query: 301 gtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgat 360 |||||||||||| || || ||||| ||||| |||||||| ||||| ||||||| |||||| Sbjct: 2885 gtcctggatcttggctttgacattatcgattgtgtcagacgactccacctccaaggtgat 2826 Query: 361 ggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccan 420 |||||||||||| | ||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 2825 ggtcttgccagtcaatgtcttcacaaagatctgcatgccacccctgaggcggagcaccaa 2766 Query: 421 gtgcaganttggactccttctggatgttgtagtc 454 ||| || || ||||||||||||||||||||| Sbjct: 2765 gtggag-ggtgctctccttctggatgttgtagtc 2733 Score = 264 bits (133), Expect = 2e-67 Identities = 212/239 (88%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||||||||||||| |||||||||||| ||||| || || || || ||||||||| Sbjct: 2545 agcaccaagtggagggtgctctccttctggatgttgtaatctgcaagggtacggccatcc 2486 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 2485 tccagctgcttgccagcaaagatgagccgctgctggtccggtggaatgccctccttgtcc 2426 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 |||||||| ||||| ||||||||||||||||| || ||||| ||||| |||||||| ||| Sbjct: 2425 tggatcttggccttgacattgtcgatggtgtccgaggactccacctcaagggtgatcgtc 2366 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 |||||||| || ||||| |||||||||||||| ||||||||||| || ||||||| ||| Sbjct: 2365 ttgccagtaagtgtcttcacgaagatctgcatgccacccctgagacgcagcaccaagtg 2307 Score = 260 bits (131), Expect = 4e-66 Identities = 234/268 (87%), Gaps = 1/268 (0%) Strand = Plus / Minus Query: 187 caccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctc 246 ||||||||||||||| ||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 2087 caccaagtggagggtgctctccttctgaatgttgtagtcggccagcgtgcgcccgtcctc 2028 Query: 247 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctg 306 |||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||| Sbjct: 2027 gagctgcttgccagcaaaaatgagccgctgctggtccggagggatgccctccttgtcctg 1968 Query: 307 gatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtctt 366 |||||| ||||| || ||||||||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 1967 gatcttggccttgacgttgtcgatggtgtcagaagactccacctcgagggtgatagtctt 1908 Query: 367 gccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcag 426 |||||||||||||| |||||||||||||| || |||||||||||||| || | ||| || Sbjct: 1907 tccagtgagggtcttgacgaagatctgcatgcctcccctgaggcggagaacaaggtggag 1848 Query: 427 anttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||| Sbjct: 1847 -ggtgctctccttctggatgttgtagtc 1821 Score = 250 bits (126), Expect = 3e-63 Identities = 244/283 (86%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||||||||||||||||||||| |||||||||||| |||||||| || Sbjct: 2789 gccacccctgaggcggagcaccaagtggagggtgctctccttctggatgttgtagtcagc 2730 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||| |||||||| |||||||| || || ||||| || ||||||||||||||||| Sbjct: 2729 caaggtgcgaccatcctccagctgcttgccggcgaagatcagccgctgctggtccggtgg 2670 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||||||||||||||||| ||||| || ||||| |||||||| || ||||| || Sbjct: 2669 aatgccctccttgtcctggatcttggccttgacgttgtcaatggtgtctgaggactccac 2610 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| ||||||||||| || ||||| |||||||||||||| ||||||||||| Sbjct: 2609 ctcaagggtgatcgtcttgccagtaagagtcttcacgaagatctgcatgccacccctgag 2550 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgta 451 || ||||||| ||| || || |||||||||||||||||| Sbjct: 2549 acgcagcaccaagtggag-ggtgctctccttctggatgttgta 2508 Score = 238 bits (120), Expect = 1e-59 Identities = 244/285 (85%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||| |||||||||||||||| |||||| || |||||||||||| |||||||| || Sbjct: 3244 ccaccgcggaggcggagcaccaggtggagagtgctctccttctggatgttgtagtctgct 3185 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || ||||| || ||||||||||| || ||| Sbjct: 3184 agggtgcggccatcctccagctgcttgccggcgaagatcagacgctgctggtctgggggg 3125 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 |||||||| |||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 3124 atgccctctttgtcctggatcttcgccttcacgttgtcgatggtgtcggagctctcaacc 3065 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||| |||||||||||||| | |||||| || ||||||||||||||||| | | | Sbjct: 3064 tccagggttatggtcttgccagtcaaggtcttcacaaagatctgcataccacctcgcaag 3005 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||| ||| || || ||||||||||||||||||||| Sbjct: 3004 cggagcaccaggtggag-ggtgctctccttctggatgttgtagtc 2961 Score = 216 bits (109), Expect = 5e-53 Identities = 195/224 (87%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||||||||||||| ||||||||| || |||||||| || || ||||| || ||| Sbjct: 2317 agcaccaagtggagggtgctctccttctgaatgttgtagtcggcaagcgtgcgcccgtcc 2258 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || |||||||| || ||||| ||||| |||||||||||||| |||||||||||||||||| Sbjct: 2257 tcgagctgcttgccggcaaaaatgagccgctgctggtccggagggatgccctccttgtcc 2198 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 |||||||| ||||| |||||||| ||||| ||||| ||||| ||||| |||||||| ||| Sbjct: 2197 tggatcttggccttgacattgtcaatggtatcagaagactcgacctcaagggtgatagtc 2138 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 |||||||| || ||||| |||||||||||||| || |||||||| Sbjct: 2137 ttgccagtcagagtcttcacgaagatctgcatgccgcccctgag 2094 Score = 198 bits (100), Expect = 1e-47 Identities = 189/219 (86%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| || | ||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 1868 gaggcggagaacaaggtggagggtgctctccttctggatgttgtagtcggcaagtgtgcg 1809 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || ||||| |||||||| ||||| |||||||| |||||||||||||| || ||||| || Sbjct: 1808 cccgtcctcgagctgcttgccagcgaagatgagccgctgctggtccgggggaatgccttc 1749 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1748 cttgtcctggatcttggccttgacgttgtcaatggtgtcagaggactccacctcgagggt 1689 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 1688 gatagtctttccagtgagagtcttgacgaagatctgcat 1650 Score = 48.1 bits (24), Expect = 0.025 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| | |||||||||||||| ||| ||| | | ||||||||||||||||||||| Sbjct: 3245 accaccgcggaggcggagcaccaggtggagagt-gctctccttctggatgttgtagtc 3189
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence Length = 1486 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||||||||||| ||||||||| |||||||||||| |||||||| ||||| ||||| Sbjct: 782 gaggcggagcaccaggtggagggtgctctccttctggatgttgtagtcggccagggtgcg 723 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||| |||||||||||||| |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 722 gccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatgccctc 663 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 662 cttgtcctggatcttggccttgacgttgtcaatggtgtcagaggactccacctcgagggt 603 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||| |||||||| || ||||| || || ||||||||||| || ||||||||||||||||| Sbjct: 602 gatagtcttgccggtcagggttttcacaaagatctgcatgcctcccctgaggcggagcac 543 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 | ||| || || ||||||||||||||||||||| Sbjct: 542 aaggtggag-ggtgctctccttctggatgttgtagtc 507 Score = 248 bits (125), Expect = 1e-62 Identities = 219/250 (87%), Gaps = 1/250 (0%) Strand = Plus / Minus Query: 205 ctccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 264 |||||||||||| ||||||||||| || ||||| |||||||| |||||||| |||||||| Sbjct: 983 ctccttctggatgttgtagtccgcgagggtgcgaccatcctccagctgcttgccagcaaa 924 Query: 265 gatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcacatt 324 ||| || ||||||||||| || || ||||||||||||||||||||||| ||||||||||| Sbjct: 923 gatcagacgctgctggtctgggggaatgccctccttgtcctggatcttggccttcacatt 864 Query: 325 gtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtcttaac 384 ||| ||||||||||| ||| ||||||| |||||||||||||||||| | ||||| || Sbjct: 863 gtcaatggtgtcagagctctccacctccaaggtgatggtcttgccagtcaatgtcttcac 804 Query: 385 gaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctgga 444 |||||||||||| || ||||||||||||||||||| ||| || || ||||||||||| Sbjct: 803 gaagatctgcatgcctcccctgaggcggagcaccaggtggag-ggtgctctccttctgga 745 Query: 445 tgttgtagtc 454 |||||||||| Sbjct: 744 tgttgtagtc 735 Score = 244 bits (123), Expect = 2e-61 Identities = 221/254 (87%) Strand = Plus / Minus Query: 161 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttg 220 |||||| | ||||||||||| |||||||| | ||||||||| |||||| ||||| ||| Sbjct: 1255 acttactgaccaccacggagacggagcacaaggtggagggtgctctccttttggatgttg 1196 Query: 221 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 280 ||||| || | |||||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 1195 tagtctgctaaggtgcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 1136 Query: 281 tccggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat 340 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1135 tccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatggtgtccgag 1076 Query: 341 gactcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatacca 400 ||||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||| Sbjct: 1075 ctctcaacctccagggttatggtttttccagtcagggtcttcacaaagatctgcatacca 1016 Query: 401 cccctgaggcggag 414 |||||||||||||| Sbjct: 1015 cccctgaggcggag 1002
>gb|AF517839.1| Triticum aestivum ubiquitin protein mRNA, partial cds Length = 204 Score = 270 bits (136), Expect = 4e-69 Identities = 186/203 (91%) Strand = Plus / Minus Query: 194 tggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgc 253 |||||||| |||||||||||||| |||||||| ||||| |||||||||||||| |||||| Sbjct: 203 tggagggtggactccttctggatgttgtagtcagccagggtgcggccatcctcgagctgc 144 Query: 254 ttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatcttt 313 || || |||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 143 ttgccggcaaagatcaggcgctgctggtccggggggatgccctccttgtcctggatcttg 84 Query: 314 gccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtg 373 |||||||||||||| |||||||| || ||||||||||||||||||||||||||||| ||| Sbjct: 83 gccttcacattgtcaatggtgtctgaggactcaacctccagggtgatggtcttgccggtg 24 Query: 374 agggtcttaacgaagatctgcat 396 |||||||| || || |||||||| Sbjct: 23 agggtctttacaaaaatctgcat 1 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 196 tggactccttctggatgttgtagtc 172
>dbj|D63782.1|CRUPUQ Cricetulus sp. gene for polyubiquitin, complete cds Length = 8730 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 7188 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 7129 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 7128 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 7069 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 7068 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 7009 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 7008 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 6949 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 6948 caggtgcag-ggtggactccttctggatgttgtagtc 6913 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 6960 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 6901 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 6900 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 6841 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||||||||||||||| Sbjct: 6840 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcaacctccagggt 6781 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 6780 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 6721 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| | ||||||||||||||||||||||| Sbjct: 6720 caggtgcag-ggtagactccttctggatgttgtagtc 6685 Score = 262 bits (132), Expect = 9e-67 Identities = 241/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 6732 gaggcggaggaccaggtgcagggtagactccttctggatgttgtagtcggacagggtgcg 6673 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 6672 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 6613 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 6612 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 6553 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 6552 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 6493 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| | ||||||||||||||||||||||| Sbjct: 6492 caggtgcag-ggtagactccttctggatgttgtagtc 6457 Score = 258 bits (130), Expect = 1e-65 Identities = 233/267 (87%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||||||||| || Sbjct: 7406 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 7347 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || |||||||| | | ||||||||| || ||||||||||||||||||||| Sbjct: 7346 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 7287 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||||||||| ||||| |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 7286 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 7227 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| || ||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 7226 cctgtcagggtctttacaaagatctgcatcccacccctgaggcggaggaccaggtgcag- 7168 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 7167 ggtggactccttctggatgttgtagtc 7141 Score = 254 bits (128), Expect = 2e-64 Identities = 240/277 (86%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 7872 gaggcggaggaccaggtgcagggtagactccttctggatgttgtagtcggacagggtgcg 7813 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || |||||||||| Sbjct: 7812 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctg 7753 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 7752 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 7693 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 7692 tatggtcttgcctgtcagggtctttacaaagatctgcatcccacccctgaggcggaggac 7633 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 7632 caggtgcag-ggtggactccttctggatgttgtagtc 7597 Score = 246 bits (124), Expect = 5e-62 Identities = 239/277 (86%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 7644 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 7585 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 7584 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 7525 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 7524 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 7465 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || ||||| || || ||||||||||| ||||||||||| | ||| || Sbjct: 7464 gatggtcttgcctgtcagggttttcacaaagatctgcatcccacccctgagcctgaggac 7405 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 7404 caggtgcag-ggtggactccttctggatgttgtagtc 7369 Score = 246 bits (124), Expect = 5e-62 Identities = 239/277 (86%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 6504 gaggcggaggaccaggtgcagggtagactccttctggatgttgtagtcggacagggtgcg 6445 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 6444 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 6385 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 6384 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 6325 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||| || || || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 6324 gatggttttccctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 6265 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| | ||||||||||||||||||||||| Sbjct: 6264 caggtgcag-ggtagactccttctggatgttgtagtc 6229 Score = 214 bits (108), Expect = 2e-52 Identities = 191/219 (87%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 6276 gaggcggaggaccaggtgcagggtagactccttctggatgttgtagtcggacagggtgcg 6217 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 6216 gccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctc 6157 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 6156 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 6097 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||| || |||||||| || ||||||||||| Sbjct: 6096 gatggtcttgcctgtcagggtcttcacaaagatctgcat 6058 Score = 131 bits (66), Expect = 2e-27 Identities = 101/112 (90%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 343 ctcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacc 402 ||||||||||||||||||||||||||| || |||||||| || ||||||||||| ||||| Sbjct: 7935 ctcaacctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacc 7876 Query: 403 cctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||| |||| |||||| | ||||||||||||||||||||||| Sbjct: 7875 cctgaggcggaggaccaggtgcag-ggtagactccttctggatgttgtagtc 7825
>dbj|AB003732.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 3273 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2780 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 2721 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 2720 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 2661 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 2660 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 2601 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 2600 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 2541 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 2540 caggtgcag-ggtggactccttctggatgttgtagtc 2505 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2552 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 2493 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 2492 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 2433 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 2432 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 2373 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 2372 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 2313 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 2312 caggtgcag-ggtggactccttctggatgttgtagtc 2277 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2324 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 2265 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 2264 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 2205 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 2204 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 2145 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 2144 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 2085 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 2084 caggtgcag-ggtggactccttctggatgttgtagtc 2049 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1640 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 1581 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 1580 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 1521 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 1520 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 1461 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1460 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 1401 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1400 caggtgcag-ggtggactccttctggatgttgtagtc 1365 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1412 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 1353 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 1352 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 1293 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 1292 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 1233 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1232 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 1173 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1172 caggtgcag-ggtggactccttctggatgttgtagtc 1137 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1184 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 1125 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 1124 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 1065 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 1064 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 1005 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1004 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 945 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 944 caggtgcag-ggtggactccttctggatgttgtagtc 909 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 956 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 897 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 896 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 837 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 836 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 777 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 776 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 717 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 716 caggtgcag-ggtggactccttctggatgttgtagtc 681 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 500 gaggcggaggaccaggtgcagggtagactccttctggatgttgtagtcggacagggtgcg 441 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 440 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 381 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 380 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 321 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 320 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 261 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 260 caggtgcag-ggtggactccttctggatgttgtagtc 225 Score = 262 bits (132), Expect = 9e-67 Identities = 241/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 3008 gaggcggaggaccaggtgcagggtagactccttctggatgttgtagtcggacagggtgcg 2949 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 2948 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 2889 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 2888 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 2829 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||| ||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 2828 gatggttttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 2769 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 2768 caggtgcag-ggtggactccttctggatgttgtagtc 2733 Score = 262 bits (132), Expect = 9e-67 Identities = 241/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 728 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 669 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 668 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 609 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 608 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 549 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 548 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 489 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| | ||||||||||||||||||||||| Sbjct: 488 caggtgcag-ggtagactccttctggatgttgtagtc 453 Score = 254 bits (128), Expect = 2e-64 Identities = 240/277 (86%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2096 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 2037 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 2036 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 1977 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 1976 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 1917 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1916 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 1857 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| | ||||||||||||| ||||||||| Sbjct: 1856 caggtgcag-ggtagactccttctggacgttgtagtc 1821 Score = 254 bits (128), Expect = 2e-64 Identities = 240/277 (86%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| ||||||||||||| |||||||| | ||| ||||| Sbjct: 1868 gaggcggaggaccaggtgcagggtagactccttctggacgttgtagtcggacagggtgcg 1809 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| | | ||||||||| || ||||||||||| Sbjct: 1808 gccatcttccagctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctc 1749 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 1748 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 1689 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||| ||||| || |||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1688 gatggttttgcctgtcagggtcttcacaaagatctgcatcccacccctgaggcggaggac 1629 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1628 caggtgcag-ggtggactccttctggatgttgtagtc 1593 Score = 206 bits (104), Expect = 5e-50 Identities = 190/219 (86%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 272 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcg 213 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 212 gccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctc 153 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||| Sbjct: 152 cttgtcctggatctttgccttgacattctcgatggtgtcactgggctcgacctccagggt 93 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| ||||| || |||||||| || ||||||||||| Sbjct: 92 gatggttttgcctgtcagggtcttcacaaagatctgcat 54 Score = 131 bits (66), Expect = 2e-27 Identities = 101/112 (90%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 343 ctcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacc 402 ||||||||||||||||||||||||||| || |||||||| || ||||||||||| ||||| Sbjct: 3071 ctcaacctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacc 3012 Query: 403 cctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||| |||| |||||| | ||||||||||||||||||||||| Sbjct: 3011 cctgaggcggaggaccaggtgcag-ggtagactccttctggatgttgtagtc 2961
>gb|M60176.1|BLYMUB2 Barley ubiquitin (mub2) gene, complete cds Length = 1730 Score = 270 bits (136), Expect = 4e-69 Identities = 204/227 (89%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 976 ccaccacgaaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 917 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||| ||||||||||| |||||||| || || ||||||||||| ||||||||||| ||| Sbjct: 916 agagtacggccatcctcgagctgcttgccggcgaagatgaggcgttgctggtccggcggg 857 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||| ||| Sbjct: 856 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgaggactccacc 797 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| |||||||||||||| || |||||||| |||||||||||||| Sbjct: 796 tccagcgtgatggtcttgcccgtcagggtcttcacgaagatctgcat 750 Score = 52.0 bits (26), Expect = 0.002 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||||| ||| || | |||||||||||||||||||||||| Sbjct: 967 aggcggagcaccaggtggagggt-ggactccttctggatgttgtagtc 921
>gb|AC152972.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0048I04, complete sequence Length = 35440 Score = 270 bits (136), Expect = 4e-69 Identities = 242/277 (87%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||||||||||||||| ||||| ||||||||||| || |||||||| || || ||||| Sbjct: 17347 gaggcggagcaccaagtgtagggtagactccttctgaatgttgtagtcggcaagggtgcg 17288 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||||||| |||||||||||||| |||||||| | |||||||||||| ||||||||||| Sbjct: 17287 gccatcctccagctgcttaccagcgaagatgagtctctgctggtccggggggatgccctc 17228 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||| ||||||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 17227 cttatcctggatcttcgccttcacgttgtcaatggtgtctgagctctcaacctccagggt 17168 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 || |||||||||||||| ||||| ||||| |||||||| |||||||| ||||| || || Sbjct: 17167 aatagtcttgccagtgagagtcttgacgaaaatctgcattccaccccttaggcgcagaac 17108 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 | ||| || ||||||||||||||||||||||||| Sbjct: 17107 aaggtgaag-ggtggactccttctggatgttgtagtc 17072 Score = 254 bits (128), Expect = 2e-64 Identities = 240/277 (86%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||||||||||| ||||||||| ||||||||||| || |||||||| || || || || Sbjct: 17575 gaggcggagcaccaggtggagggtagactccttctgaatgttgtagtcggcgagggtacg 17516 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || || ||||| |||||||||||||| || || || || || Sbjct: 17515 gccatcttccagctgcttgccggcgaagatcaggcgctgctggtctgggggaataccttc 17456 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| |||||||||||||||||||| || || |||||||||||| || Sbjct: 17455 cttgtcctggatcttagccttcacattgtcgatggtatcggagctctcaacctccagagt 17396 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 17395 aatggtcttgccagtaagagtcttgacgaagatctgcataccacccctgaggcggagcac 17336 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||| || | ||||||||||| ||||||||||| Sbjct: 17335 caagtgtag-ggtagactccttctgaatgttgtagtc 17300 Score = 234 bits (118), Expect = 2e-58 Identities = 195/221 (88%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 ||||||||||| || | ||||||||| || ||||||||||| |||||||| || || ||| Sbjct: 16665 cggaggcggaggacaaggtggagggtggattccttctggatgttgtagtcagcaagcgtg 16606 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 || ||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 16605 cgcccatcttcaagctgcttgccagcgaagatgagacgctgctggtccggtgggattccc 16546 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| ||||| |||||||| ||||| || || ||||||||||| ||| Sbjct: 16545 tccttgtcctggatcttggcctttacattgtcaatggtatccgaggactcaacctcaagg 16486 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 16485 gttatggtcttgccagtgagagtcttcacaaagatctgcat 16445 Score = 224 bits (113), Expect = 2e-55 Identities = 222/258 (86%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| |||||||||||||| |||||||| || || || | ||||||||| |||||||| Sbjct: 17100 agggtggactccttctggatgttgtagtcagcgagggtcctgccatcctccagctgcttg 17041 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 || ||||| || || |||||||| || || || ||||||||||||||||||||||| ||| Sbjct: 17040 ccggcaaaaataagacgctgctgatctgggggaatgccctccttgtcctggatcttcgcc 16981 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 ||||| |||||||| ||||| |||||||||||||| || || |||||||||||||| ||| Sbjct: 16980 ttcacgttgtcgatcgtgtctgatgactcaacctcaagcgtaatggtcttgccagtaagg 16921 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| |||||||||||||| || ||||| |||||||| || | ||| || ||||||| Sbjct: 16920 gtcttcacgaagatctgcattcctccccttaggcggagaacaaggtgaag-ggtggactc 16862 Query: 437 cttctggatgttgtagtc 454 |||||||||||||||||| Sbjct: 16861 cttctggatgttgtagtc 16844 Score = 196 bits (99), Expect = 4e-47 Identities = 232/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| || | ||| ||||| |||||||||||||| |||||||| || || || | Sbjct: 16890 aggcggagaacaaggtgaagggtggactccttctggatgttgtagtcagcaagggtccta 16831 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 |||||||| |||||||| ||||||||||| || |||||||||||||| || || || ||| Sbjct: 16830 ccatcctcgagctgcttgccagcaaagatcagacgctgctggtccgggggaatcccttcc 16771 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||||||||| || ||||| || || ||||| ||||||||||| |||||| Sbjct: 16770 ttgtcctggatctttgccttaacgttgtcaatagtatcagaagactcaacctcaagggtg 16711 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 || ||||||||||| | |||||| || ||||| ||||| || |||| ||||||||| || Sbjct: 16710 atagtcttgccagtcaaggtcttgacaaagatttgcatgcctccccggaggcggaggaca 16651 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||| || |||| |||||||||||||||||||| Sbjct: 16650 aggtggag-ggtggattccttctggatgttgtagtc 16616 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||||||||||||||| ||| || | ||||||||||| ||||||||||| Sbjct: 17584 accacccctgaggcggagcaccaggtggag-ggtagactccttctgaatgttgtagtc 17528
>gb|U29159.1|ZMU29159 Zea mays clone MubG1 ubiquitin gene, complete cds Length = 4190 Score = 266 bits (134), Expect = 6e-68 Identities = 219/247 (88%), Gaps = 1/247 (0%) Strand = Plus / Minus Query: 205 ctccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 264 |||||||||||| ||||| |||||||| |||||||||||||| |||||||| || || || Sbjct: 3446 ctccttctggatgttgtaatccgccagggtgcggccatcctccagctgcttgccggcgaa 3387 Query: 265 gatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcacatt 324 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 3386 gatgaggcgctgctggtcgggtgggatgccctccttgtcctggatcttggccttgacatt 3327 Query: 325 gtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtcttaac 384 ||| ||||| || || ||||| ||||| |||||||| |||||||||||||| ||||| || Sbjct: 3326 gtcaatggtatccgaagactccacctcaagggtgattgtcttgccagtgagtgtcttcac 3267 Query: 385 gaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctgga 444 ||||||||||||||||||||||| |||||||||| ||| || || ||||||||||| Sbjct: 3266 aaagatctgcataccacccctgagacggagcaccaggtggag-ggtgctctccttctgga 3208 Query: 445 tgttgta 451 ||||||| Sbjct: 3207 tgttgta 3201 Score = 248 bits (125), Expect = 1e-62 Identities = 252/294 (85%), Gaps = 1/294 (0%) Strand = Plus / Minus Query: 161 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttg 220 |||||| | ||||||||||| |||||||| | ||||||||| |||||| ||||| ||| Sbjct: 3946 acttactgaccaccacggagacggagcacaaggtggagggtgctctccttttggatgttg 3887 Query: 221 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 280 ||||| || || |||||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 3886 tagtctgctagggtgcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 3827 Query: 281 tccggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat 340 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 3826 tccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatggtgtccgag 3767 Query: 341 gactcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatacca 400 ||||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||| Sbjct: 3766 ctctcaacctccagggttatggtttttccagtcagggtctttacaaagatctgcatacca 3707 Query: 401 cccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || ||||||||||| || | ||| || || ||||||||||||||||||||| Sbjct: 3706 cctctgaggcggagaacaaggtgaag-ggtgctctccttctggatgttgtagtc 3654 Score = 246 bits (124), Expect = 5e-62 Identities = 236/273 (86%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||||||||| |||||||||||| ||||| ||||| || ||||||||| Sbjct: 3241 cggagcaccaggtggagggtgctctccttctggatgttgtaatccgcaagggtgcggcca 3182 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 ||||| |||||||| ||||| ||||| | |||||||||||||||||||||||||||||| Sbjct: 3181 tcctccagctgcttgccagcgaagatcaaacgctgctggtccggtgggatgccctccttg 3122 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||| ||||||||||||||||| || ||||| ||||| |||||||| Sbjct: 3121 tcctggatcttggccttgacattgtcgatggtgtctgaagactccacctcgagggtgata 3062 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || ||||| || || ||||||||||| || |||||||| |||||||| | | Sbjct: 3061 gtcttgccggtcagggttttcacaaagatctgcatgcctcccctgagacggagcacaagg 3002 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 || || || ||||||||||||||||||||| Sbjct: 3001 tggag-ggtgctctccttctggatgttgtagtc 2970 Score = 246 bits (124), Expect = 5e-62 Identities = 236/273 (86%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||| | ||||||||| |||||||||||| |||||||| || || ||||| || Sbjct: 3013 cggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcgcccg 2954 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 ||||||||||| || |||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 2953 tcctcaagctgtttgccagcaaagatgagccgctgctggtctggggggatgccctccttg 2894 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 2893 tcctggatcttggccttaacgttgtcaatggtgtcagacgactccacctcgagggtgata 2834 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| || ||||||||||| ||||||| | Sbjct: 2833 gtcttgccggtcagggtcttcacgaagatctgcatgcctcccctgaggcgcagcaccaag 2774 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 || || || ||||||||||||||||||||| Sbjct: 2773 tggag-ggtgctctccttctggatgttgtagtc 2742 Score = 234 bits (118), Expect = 2e-58 Identities = 215/247 (87%), Gaps = 1/247 (0%) Strand = Plus / Minus Query: 205 ctccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 264 |||||||||||| ||||||||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 3674 ctccttctggatgttgtagtccgcgagagtgcggccatcctccagctgcttgcccgcaaa 3615 Query: 265 gatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcacatt 324 ||| || ||||||||||| || || ||||||||||||||||||||||| ||||||||||| Sbjct: 3614 gatcagacgctgctggtctgggggaatgccctccttgtcctggatcttggccttcacatt 3555 Query: 325 gtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtcttaac 384 ||| ||||||||||| ||| ||||||| |||||||||||||||||| | ||||| || Sbjct: 3554 gtcaatggtgtcagagctctccacctccaaggtgatggtcttgccagtcaatgtcttcac 3495 Query: 385 gaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctgga 444 || |||||||| |||||||||||||||| |||| ||| ||| || ||||||||||| Sbjct: 3494 aaaaatctgcatgccacccctgaggcggacgaccaggtggagag-tgctctccttctgga 3436 Query: 445 tgttgta 451 ||||||| Sbjct: 3435 tgttgta 3429 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||||||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 2789 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 2730 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || |||||||||||||| |||||||||||||| ||||||||||| || || |||||||| Sbjct: 2729 cccgtcctcaagctgctttccagcaaagatgagccgctgctggtctgggggaatgccctc 2670 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || |||||||||||||| || ||||| ||||| ||||| Sbjct: 2669 cttgtcctggatcttggccttgacgttgtcgatggtgtctgaagactccacctcgagggt 2610 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||| |||||||| || | ||| || || ||||||||||| || |||||||| |||||||| Sbjct: 2609 gatagtcttgccggtcaaggttttcacaaagatctgcatgcctcccctgagacggagcac 2550 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 | ||| || || ||||||||||||||||||||| Sbjct: 2549 aaggtggag-ggtgctctccttctggatgttgtagtc 2514 Score = 206 bits (104), Expect = 5e-50 Identities = 187/215 (86%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||| | ||||||||| |||||||||||| |||||||| || || ||||| || Sbjct: 2557 cggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcgcccg 2498 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 ||||||||||| || |||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 2497 tcctcaagctgtttgccagcaaagatgagccgctgctggtctggggggatgccctccttg 2438 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 2437 tcctggatcttggccttaacgttgtcaatggtgtcagacgactccacctcgagggtgata 2378 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| ||||| || || ||||||||||| Sbjct: 2377 gtcttgccagtcagggttttcacaaagatctgcat 2343
>gb|BT016494.1| Zea mays clone Contig327 mRNA sequence Length = 974 Score = 264 bits (133), Expect = 2e-67 Identities = 254/294 (86%), Gaps = 1/294 (0%) Strand = Plus / Minus Query: 161 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttg 220 |||||| | ||||||||||| |||||||||| ||||||||| |||||| ||||| ||| Sbjct: 759 acttactgaccaccacggagacggagcaccaggtggagggtgctctccttttggatgttg 700 Query: 221 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 280 ||||| ||||| ||||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 699 tagtcggccagcgtgcgcccgtcctcaagctgctttccagcaaagatgagccgctgctgg 640 Query: 281 tccggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat 340 || || || ||||||||||||||||||||||| ||||| || |||||||||||||| || Sbjct: 639 tctgggggaatgccctccttgtcctggatcttggccttgacgttgtcgatggtgtctgaa 580 Query: 341 gactcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatacca 400 ||||| ||||| |||||||| || ||||| || |||||||| |||||||||||||| || Sbjct: 579 gactccacctcgagggtgatagttttgccggtcagggtcttcacgaagatctgcatgcct 520 Query: 401 cccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||| ||||||| ||| || || ||||||||||||||||||||| Sbjct: 519 cccctgaggcgcagcaccaagtggag-ggtgctctccttctggatgttgtagtc 467 Score = 254 bits (128), Expect = 2e-64 Identities = 240/277 (86%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||||||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 514 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 455 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || |||||||||||||| |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 454 cccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatgccctc 395 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 394 cttgtcctggatcttggccttgacgttgtcaatggtgtcagaggactccacctcgagggt 335 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||| |||||||| || ||||| || || ||||||||||| || ||||||||||||||||| Sbjct: 334 gatagtcttgccggtcagggttttcacaaagatctgcatgcctcccctgaggcggagcac 275 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 | ||| || || ||||||||||||||||||||| Sbjct: 274 aaggtggag-ggtgctctccttctggatgttgtagtc 239 Score = 184 bits (93), Expect = 2e-43 Identities = 189/220 (85%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||||||||| | ||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 286 gaggcggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcg 227 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || ||||||||||| || ||||| |||||||| ||||||||||| || ||||||||||| Sbjct: 226 cccgtcctcaagctgtttgccagcgaagatgagccgctgctggtctggggggatgccctc 167 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg-g 356 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||| | Sbjct: 166 cttgtcctggatcttggccttaacgttgtcaatggtgtcagacgactccacctcgaggag 107 Query: 357 tgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||| |||||||| || ||||| || || ||||||||||| Sbjct: 106 tgatagtcttgccggtcagggttttcacaaagatctgcat 67
>gb|AY098526.1| Ananas comosus tetrameric ubiquitin mRNA, complete cds Length = 1199 Score = 264 bits (133), Expect = 2e-67 Identities = 245/282 (86%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 |||||||| |||||||| | |||||| ||||||||||||||||| ||||||||||||||| Sbjct: 718 ccacggagacggagcacgaggtggagcgtcgactccttctggatgttgtagtccgccaga 659 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 |||||||| ||||| | |||||| || || ||||| || |||||||||||||| ||||| Sbjct: 658 gtgcggccgtcctccaactgcttgcctgcgaagatcagacgctgctggtccggcgggata 599 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 ||||||||||||||||| || ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 598 ccctccttgtcctggattttggccttaacattgtcgatggtgtcggaggactcgacctcg 539 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgg 412 ||||||||||||||||| || |||||||| |||||||||||||| || || | ||| ||| Sbjct: 538 agggtgatggtcttgccggtcagggtcttgacgaagatctgcatgccgccacggagacgg 479 Query: 413 agcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| | ||| || | ||||||||||||||||||||||| Sbjct: 478 agcacgaggtggag-cgtcgactccttctggatgttgtagtc 438 Score = 260 bits (131), Expect = 4e-66 Identities = 252/292 (86%), Gaps = 1/292 (0%) Strand = Plus / Minus Query: 163 ttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgta 222 |||| ||||||| || ||||| || || | ||||||||| || ||||||||||| ||||| Sbjct: 956 ttactggccaccgcgcaggcgaaggacgaggtggagggttgattccttctggatgttgta 897 Query: 223 gtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 282 |||||||||||||||||| ||||| | ||||||||| ||||||||||| ||||||||||| Sbjct: 896 gtccgccagagtgcggccgtcctccaactgcttaccggcaaagatgagccgctgctggtc 837 Query: 283 cggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatga 342 ||| |||||||||||||||||||||||||| || || || |||||||| ||||| || || Sbjct: 836 cggcgggatgccctccttgtcctggatcttagctttgacgttgtcgatcgtgtcggagga 777 Query: 343 ctcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacc 402 ||| ||||| ||||||||||||||||| || |||||||| |||||||||||||| || || Sbjct: 776 ctcgacctcgagggtgatggtcttgccggtcagggtcttcacgaagatctgcatgccgcc 717 Query: 403 cctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 | ||| |||||||| | ||| || | ||||||||||||||||||||||| Sbjct: 716 acggagacggagcacgaggtggag-cgtcgactccttctggatgttgtagtc 666 Score = 248 bits (125), Expect = 1e-62 Identities = 243/282 (86%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 |||||||| |||||||| | |||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 490 ccacggagacggagcacgaggtggagcgtcgactccttctggatgttgtagtccgcaaga 431 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 |||||||| ||||| | |||||| || || ||||| || |||||||||||||| ||||| Sbjct: 430 gtgcggccgtcctccaactgcttgcctgcgaagatcagacgctgctggtccggggggatc 371 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 ||||||||||||||||| || ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 370 ccctccttgtcctggattttggccttgacattgtcgatggtgtcggaggactcgacctcg 311 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgg 412 ||||||||||||||||| || |||||||| |||||||||||||| || || | ||| ||| Sbjct: 310 agggtgatggtcttgccggtcagggtcttgacgaagatctgcatgccgccacggagacgg 251 Query: 413 agcaccangtgcaganttggactccttctggatgttgtagtc 454 || || | ||| || | ||||||||||||||||||||||| Sbjct: 250 aggacgaggtggag-cgtcgactccttctggatgttgtagtc 210 Score = 216 bits (109), Expect = 5e-53 Identities = 195/224 (87%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 |||||||| ||||| || | |||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 262 ccacggagacggaggacgaggtggagcgtcgactccttctggatgttgtagtccgcgaga 203 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 |||||||| ||||| | |||||| || || ||||| | |||||||||||||| ||||| Sbjct: 202 gtgcggccgtcctccaactgcttgccggcgaagatcaaccgctgctggtccggggggatc 143 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 ||||||||||||||||| || ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 142 ccctccttgtcctggattttggccttgacattgtcgatggtgtcggacgactcgacctcg 83 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||||||||| || |||||||| |||||||| ||||| Sbjct: 82 agggtgatggtcttgccggtcagggtcttgacgaagatttgcat 39
>gb|L41658.1|SCFPOLY Saccharum hybrid (clone SCUBI561) polyubiquitin mRNA, complete cds Length = 1187 Score = 264 bits (133), Expect = 2e-67 Identities = 239/274 (87%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||||||||| |||||||||||| ||||| || || |||||||| Sbjct: 745 gaggcgcagcaccaggtggagggtgctctccttctggatgttgtaatcagcaagagtgcg 686 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || ||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 685 cccgtcctccagctgcttgccagcgaagatgagccgctgctggtccggagggatgccctc 626 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| Sbjct: 625 cttgtcctggatcttggccttgacgttgtcgatggtgtcagaggactccacctcaagggt 566 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 565 gatcgtcttgccagtaagggtcttcacgaagatctgcatgcctcccctgaggcgcagcac 506 Query: 418 cangtgcaganttggactccttctggatgttgta 451 || ||| || || |||||||||||||||||| Sbjct: 505 caagtggag-ggtgctctccttctggatgttgta 473 Score = 252 bits (127), Expect = 9e-64 Identities = 237/274 (86%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||||||||||||| |||||||||||| ||||| || || |||||||| Sbjct: 517 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtaatcagcaagagtgcg 458 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || ||||| |||||||| || || |||||||| |||||||||||||| ||||||||||| Sbjct: 457 cccgtcctccagctgcttgccggcgaagatgagccgctgctggtccggagggatgccctc 398 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| Sbjct: 397 cttgtcctggatcttggccttgacgttgtcgatggtgtcagaggactccacctcaagggt 338 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||| ||||||||||| |||||||| || ||||||||||| || ||||||||||| || || Sbjct: 337 gatcgtcttgccagtaagggtcttcacaaagatctgcatgcctcccctgaggcgcagmac 278 Query: 418 cangtgcaganttggactccttctggatgttgta 451 || ||| || || |||||||||||||||||| Sbjct: 277 caagtggag-ggtgctctccttctggatgttgta 245 Score = 232 bits (117), Expect = 8e-58 Identities = 241/282 (85%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| || |||||||||| ||||||||| |||||||||||| |||||||| || Sbjct: 981 ccaccacgaagacggagcaccaggtggagggtgctctccttctggatgttgtagtctgca 922 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || ||||| || ||||| |||||||| ||| Sbjct: 921 agggtgcggccatcctccagctgcttgccggcgaagatcagacgctgttggtccgggggg 862 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 861 atcccctccttgtcctggatcttggccttcacgttgtcgatggtgtcggagctctcaacc 802 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| || |||||||||||||| | |||||| || ||||||||||| || ||||||||| Sbjct: 801 tccagtgttatggtcttgccagtcaaggtcttcacaaagatctgcattcctcccctgagg 742 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgta 451 || ||||||| ||| || || |||||||||||||||||| Sbjct: 741 cgcagcaccaggtggag-ggtgctctccttctggatgttgta 701 Score = 210 bits (106), Expect = 3e-51 Identities = 190/219 (86%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||||||||||||| |||||||||||| ||||| || || |||||||| Sbjct: 289 gaggcgcagmaccaagtggagggtgctctccttctggatgttgtaatcagcaagagtgcg 230 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || ||||| |||||||| || || |||||||| |||||||||||||| || |||||||| Sbjct: 229 cccgtcctccagctgcttgccggcgaagatgagccgctgctggtccgggggaatgccctc 170 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 169 cttgtcctggatcttagccttgacgttgtcaatggtgtcagaagactccacctcgagggt 110 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| ||||||||||| || ||||||||||| Sbjct: 109 gatagtcttgccggtgagggtcttcacaaagatctgcat 71 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 ctccttctggatgttgtagtc 454 ||||||||||||||||||||| Sbjct: 946 ctccttctggatgttgtagtc 926
>gb|M60175.1|BLYMUB1 Barley ubiquitin (mub1) gene, complete cds Length = 1815 Score = 264 bits (133), Expect = 2e-67 Identities = 204/228 (89%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| ||||| |||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 786 gccaccgcggagtcggagcaccaggtggagggtggactccttctggatgttgtagtcggc 727 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || |||||||| ||||| |||||||| || || ||||||||||||||||||||||| || Sbjct: 726 gagggtgcggccgtcctcgagctgcttgccggcgaagatgaggcgctgctggtccggcgg 667 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||| ||||| || |||||||||||||| || ||||| || Sbjct: 666 gatgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgacgactccac 607 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| |||||||||||||| || |||||||| |||||||||||||| Sbjct: 606 ctccagcgtgatggtcttgcccgtcagggtcttcacgaagatctgcat 559 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 754 tggactccttctggatgttgtagtc 730
>gb|BT017060.1| Zea mays clone EL01N0358B03.c mRNA sequence Length = 795 Score = 262 bits (132), Expect = 9e-67 Identities = 197/219 (89%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||||||||||| ||| || ||||||||||||||||| |||||||| || || ||||| Sbjct: 320 gaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtcggcgagggtgcg 261 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||||||| |||||||| || || ||||||||||||||||||||||| ||||||||||| Sbjct: 260 gccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggcgggatgccctc 201 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| || Sbjct: 200 cttgtcctggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgt 141 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||| || || |||||||| |||||||||||||| Sbjct: 140 gatggtcttccccgtcagggtcttcacgaagatctgcat 102 Score = 63.9 bits (32), Expect = 4e-07 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 401 cccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 325 cccctgaggcggagcaccaggtgcag-cgtcgactccttctggatgttgtagtc 273
>gb|DQ216253.1| Taeniopygia guttata clone 0058P0031B03 ubiquitin C variant 14-like mRNA, complete sequence Length = 1327 Score = 260 bits (131), Expect = 4e-66 Identities = 240/276 (86%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | || ||||| Sbjct: 514 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcggagagggtgcgc 455 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 |||||||| |||||||||||||||||||| || | ||||||||| || |||||||||||| Sbjct: 454 ccatcctccagctgcttaccagcaaagatcagcctctgctggtcaggagggatgccctcc 395 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | |||||| ||||||||| Sbjct: 394 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctcaacttccagggtg 335 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| ||||| || ||||| |||||| Sbjct: 334 atggtcttgccggtcagggtcttcacgaagatctgcatcccacctctcaggcgcagcacc 275 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||||||| || ||||||||||| ||||||||||| Sbjct: 274 aggtgcagagtt-gactccttctgaatgttgtagtc 240 Score = 208 bits (105), Expect = 1e-50 Identities = 241/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| ||||||| ||| ||||| || ||||||||||| ||||| || | Sbjct: 980 gccacccctgaggcgcagcaccaggtgcagggtggattccttctggatgttgtaatcgga 921 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||| ||||| || |||||||| ||||| || || || | ||||||||| || || Sbjct: 920 aagggtgcgcccatcttccagctgcttgccagcgaaaatcagcctctgctggtctggggg 861 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||| ||||||||||| ||||| ||||| ||||||||||| | |||||| Sbjct: 860 aatgccttccttatcctggatcttggccttgacattctcgatggtgtcgctgggctcaac 801 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 800 ttccagggtgatggtcttgccagtcagggtcttgacgaagatctgcatcccacccctgag 741 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| ||||||| |||||| |||| |||||||||||||||||||| Sbjct: 740 gcgcagcaccaggtgcag-ggtggattccttctggatgttgtagtc 696 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| || ||||||||||| |||||||| | || ||||| Sbjct: 743 gaggcgcagcaccaggtgcagggtggattccttctggatgttgtagtctgagagggtgcg 684 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| ||||||||||| || | ||||||||| || ||||| || || Sbjct: 683 cccatcttccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttc 624 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| ||||| || |||||||| | |||||| |||||||| Sbjct: 623 cttgtcctggatcttggccttgacattttcaatggtgtcgctgggctcaacttccagggt 564 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| || ||||| ||||| Sbjct: 563 gatggtcttgccggtcagggtcttcacaaagatctgcatcccacctctcaggcgcagcac 504 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| |||| |||||||||||||||||||| Sbjct: 503 caggtgcag-ggtggattccttctggatgttgtagtc 468 Score = 188 bits (95), Expect = 1e-44 Identities = 187/218 (85%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| || || ||||||||||| || |||||||| | ||| |||||| Sbjct: 286 aggcgcagcaccaggtgcagagttgactccttctgaatgttgtagtcggacagggtgcgg 227 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || ||||||||||| |||||||| || | ||||||||| || || ||||||||| Sbjct: 226 ccatcttccagctgcttaccggcaaagatcagcctctgctggtctgggggaatgccctcc 167 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| |||||| Sbjct: 166 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcaagggtg 107 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||| |||||||| || ||||||||||| Sbjct: 106 atggtcttgccagtcagggtcttcacaaagatctgcat 69
>gb|DQ216249.1| Taeniopygia guttata clone 0058P0031D03 ubiquitin C variant 9-like mRNA, complete sequence Length = 1327 Score = 260 bits (131), Expect = 4e-66 Identities = 240/276 (86%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | || ||||| Sbjct: 514 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcggagagggtgcgc 455 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 |||||||| |||||||||||||||||||| || | ||||||||| || |||||||||||| Sbjct: 454 ccatcctccagctgcttaccagcaaagatcagcctctgctggtcaggagggatgccctcc 395 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | |||||| ||||||||| Sbjct: 394 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctcaacttccagggtg 335 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| ||||| || ||||| |||||| Sbjct: 334 atggtcttgccggtcagggtcttcacgaagatctgcatcccacctctcaggcgcagcacc 275 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||||||| || ||||||||||| ||||||||||| Sbjct: 274 aggtgcagagtt-gactccttctgaatgttgtagtc 240 Score = 192 bits (97), Expect = 7e-46 Identities = 239/286 (83%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| ||||||| ||| ||||| || ||||||||||| |||||||| | Sbjct: 980 gccacccctgaggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcgga 921 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||| ||||| || |||||||| ||||| || || || | ||||||||| || || Sbjct: 920 aagggtgcgcccatcttccagctgcttgccagcgaaaatcagcctctgctggtctggggg 861 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||| ||||||||||| ||||| ||||| ||||||||||| | |||||| Sbjct: 860 aatgccttccttatcctggatcttggccttgacattctcgatggtgtcgctgggctcaac 801 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||| Sbjct: 800 ttccagggtgatggtcttgccagtcagggtcttgacgaaaatctgcatcccacccctgag 741 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| ||||||| ||||| |||| || ||||||||||||||||| Sbjct: 740 gcgcagcaccagatgcag-ggtggattctttctggatgttgtagtc 696 Score = 188 bits (95), Expect = 1e-44 Identities = 187/218 (85%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| || || ||||||||||| || |||||||| | ||| |||||| Sbjct: 286 aggcgcagcaccaggtgcagagttgactccttctgaatgttgtagtcggacagggtgcgg 227 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || ||||||||||| |||||||| || | ||||||||| || || ||||||||| Sbjct: 226 ccatcttccagctgcttaccggcaaagatcagcctctgctggtctgggggaatgccctcc 167 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| |||||| Sbjct: 166 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcaagggtg 107 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||| |||||||| || ||||||||||| Sbjct: 106 atggtcttgccagtcagggtcttcacaaagatctgcat 69 Score = 182 bits (92), Expect = 7e-43 Identities = 231/277 (83%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| || ||||| || || |||||||| |||||||| | || ||||| Sbjct: 743 gaggcgcagcaccagatgcagggtggattctttctggatgttgtagtctgagagggtgcg 684 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| ||||||||||| || | ||||||||| || ||||| || || Sbjct: 683 cccatcttccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttc 624 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| ||||| || |||||||| | |||||| |||||||| Sbjct: 623 cttgtcctggatcttggccttgacattttcaatggtgtcgctgggctcaacttccagggt 564 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| || ||||| ||||| Sbjct: 563 gatggtcttgccggtcagggtcttcacaaagatctgcatcccacctctcaggcgcagcac 504 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| |||| |||||||||||||||||||| Sbjct: 503 caggtgcag-ggtggattccttctggatgttgtagtc 468
>gb|DQ216247.1| Taeniopygia guttata clone 0058P0020E12 ubiquitin C variant 7-like mRNA, complete sequence Length = 1383 Score = 260 bits (131), Expect = 4e-66 Identities = 240/276 (86%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | || ||||| Sbjct: 514 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcggagagggtgcgc 455 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 |||||||| |||||||||||||||||||| || | ||||||||| || |||||||||||| Sbjct: 454 ccatcctccagctgcttaccagcaaagatcagcctctgctggtcaggagggatgccctcc 395 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | |||||| ||||||||| Sbjct: 394 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctcaacttccagggtg 335 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| ||||| || ||||| |||||| Sbjct: 334 atggtcttgccggtcagggtcttcacgaagatctgcatcccacctctcaggcgcagcacc 275 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||||||| || ||||||||||| ||||||||||| Sbjct: 274 aggtgcagagtt-gactccttctgaatgttgtagtc 240 Score = 196 bits (99), Expect = 4e-47 Identities = 232/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | || ||||| Sbjct: 742 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtctgagagggtgcgc 683 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || ||||| || ||| Sbjct: 682 ccatcttccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttcc 623 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||| ||||| || |||||||| | |||||| ||||||||| Sbjct: 622 ttgtcctggatcttggccttgacattttcaatggtgtcgctgggctcaacttccagggtg 563 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| || ||||||||||| ||||| || ||||| |||||| Sbjct: 562 atggtcttgccggtcagggtcttcacaaagatctgcatcccacctctcaggcgcagcacc 503 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| |||| |||||||||||||||||||| Sbjct: 502 aggtgcag-ggtggattccttctggatgttgtagtc 468 Score = 192 bits (97), Expect = 7e-46 Identities = 239/286 (83%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| ||||||| ||| ||||| || ||||||||||| |||||||| | Sbjct: 1208 gccacccctgaggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcgga 1149 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||| ||||| || |||||||| || || || || || | ||||||||| || || Sbjct: 1148 gagggtgcgcccatcttccagctgcttgccggcgaaaatcagcctctgctggtctggggg 1089 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||| ||||||||||| ||||| ||||| ||||||||||| | |||||| Sbjct: 1088 aatgccttccttatcctggatcttggccttgacattctcgatggtgtcgctgggctcaac 1029 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1028 ttccagggtgatggtcttgccagtcagggtcttgacgaagatctgcatcccacccctgag 969 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| ||||||| ||||| |||| || ||||||||||||||||| Sbjct: 968 gcgcagcaccagatgcag-ggtggattctttctggatgttgtagtc 924 Score = 188 bits (95), Expect = 1e-44 Identities = 187/218 (85%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| || || ||||||||||| || |||||||| | ||| |||||| Sbjct: 286 aggcgcagcaccaggtgcagagttgactccttctgaatgttgtagtcggacagggtgcgg 227 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || ||||||||||| |||||||| || | ||||||||| || || ||||||||| Sbjct: 226 ccatcttccagctgcttaccggcaaagatcagcctctgctggtctgggggaatgccctcc 167 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| |||||| Sbjct: 166 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcaagggtg 107 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||| |||||||| || ||||||||||| Sbjct: 106 atggtcttgccagtcagggtcttcacaaagatctgcat 69 Score = 167 bits (84), Expect = 4e-38 Identities = 229/277 (82%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| || ||||| || || |||||||| |||||||| | || ||||| Sbjct: 971 gaggcgcagcaccagatgcagggtggattctttctggatgttgtagtcagagagggtgcg 912 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| ||||| ||||| || | ||||||||| || ||||| || || Sbjct: 911 cccatcttccagctgcttgccagcgaagatcagcctctgctggtcaggagggataccttc 852 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| ||||| || ||||||||| | ||| ||||| || || Sbjct: 851 cttgtcctggatcttggccttgacattttcaatggtgtcactgggctccacctcaagagt 792 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| || ||||| ||||| Sbjct: 791 gatggtcttgccggtcagggtcttcacaaagatctgcatcccacctctcaggcgcagcac 732 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| |||| |||||||||||||||||||| Sbjct: 731 caggtgcag-ggtggattccttctggatgttgtagtc 696
>gb|DQ216246.1| Taeniopygia guttata clone 0058P0016A01 ubiquitin C variant 7-like mRNA, complete sequence Length = 1377 Score = 260 bits (131), Expect = 4e-66 Identities = 240/276 (86%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | || ||||| Sbjct: 514 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcggagagggtgcgc 455 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 |||||||| |||||||||||||||||||| || | ||||||||| || |||||||||||| Sbjct: 454 ccatcctccagctgcttaccagcaaagatcagcctctgctggtcaggagggatgccctcc 395 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | |||||| ||||||||| Sbjct: 394 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctcaacttccagggtg 335 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| ||||| || ||||| |||||| Sbjct: 334 atggtcttgccggtcagggtcttcacgaagatctgcatcccacctctcaggcgcagcacc 275 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||||||| || ||||||||||| ||||||||||| Sbjct: 274 aggtgcagagtt-gactccttctgaatgttgtagtc 240 Score = 200 bits (101), Expect = 3e-48 Identities = 240/286 (83%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| ||||||| ||| ||||| || ||||||||||| |||||||| | Sbjct: 1208 gccacccctgaggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcgga 1149 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||| ||||| || |||||||| ||||| || || || | ||||||||| || || Sbjct: 1148 gagggtgcgcccatcttccagctgcttgccagcgaaaatcagcctctgctggtctggggg 1089 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||| ||||||||||| ||||| ||||| ||||||||||| | |||||| Sbjct: 1088 aatgccttccttatcctggatcttggccttgacattctcgatggtgtcgctgggctcaac 1029 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1028 ttccagggtgatggtcttgccagtcagggtcttgacgaagatctgcatcccacccctgag 969 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| ||||||| ||||| |||| || ||||||||||||||||| Sbjct: 968 gcgcagcaccagatgcag-ggtggattctttctggatgttgtagtc 924 Score = 196 bits (99), Expect = 4e-47 Identities = 232/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | || ||||| Sbjct: 742 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtctgagagggtgcgc 683 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || ||||| || ||| Sbjct: 682 ccatcttccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttcc 623 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||| ||||| || |||||||| | |||||| ||||||||| Sbjct: 622 ttgtcctggatcttggccttgacattttcaatggtgtcgctgggctcaacttccagggtg 563 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| || ||||||||||| ||||| || ||||| |||||| Sbjct: 562 atggtcttgccggtcagggtcttcacaaagatctgcatcccacctctcaggcgcagcacc 503 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| |||| |||||||||||||||||||| Sbjct: 502 aggtgcag-ggtggattccttctggatgttgtagtc 468 Score = 188 bits (95), Expect = 1e-44 Identities = 187/218 (85%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| || || ||||||||||| || |||||||| | ||| |||||| Sbjct: 286 aggcgcagcaccaggtgcagagttgactccttctgaatgttgtagtcggacagggtgcgg 227 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || ||||||||||| |||||||| || | ||||||||| || || ||||||||| Sbjct: 226 ccatcttccagctgcttaccggcaaagatcagcctctgctggtctgggggaatgccctcc 167 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| |||||| Sbjct: 166 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcaagggtg 107 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||| |||||||| || ||||||||||| Sbjct: 106 atggtcttgccagtcagggtcttcacaaagatctgcat 69 Score = 167 bits (84), Expect = 4e-38 Identities = 229/277 (82%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| || ||||| || || |||||||| |||||||| | || ||||| Sbjct: 971 gaggcgcagcaccagatgcagggtggattctttctggatgttgtagtcagagagggtgcg 912 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| ||||| ||||| || | ||||||||| || ||||| || || Sbjct: 911 cccatcttccagctgcttgccagcgaagatcagcctctgctggtcaggagggataccttc 852 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| ||||| || ||||||||| | ||| ||||| || || Sbjct: 851 cttgtcctggatcttggccttgacattttcaatggtgtcactgggctccacctcaagagt 792 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| || ||||| ||||| Sbjct: 791 gatggtcttgccggtcagggtcttcacaaagatctgcatcccacctctcaggcgcagcac 732 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| |||| |||||||||||||||||||| Sbjct: 731 caggtgcag-ggtggattccttctggatgttgtagtc 696
>gb|U74358.1|MDU74358 Malus domestica ubiquitin mRNA, partial cds Length = 238 Score = 260 bits (131), Expect = 4e-66 Identities = 205/230 (89%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||| || | |||||| ||||| || |||||||||||||| |||||||| || Sbjct: 238 gccaccacggagacgcaacaccaaatggagagtggactccttctggatgttgtagtcggc 179 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || ||||| |||||||||||||| ||||||||||| || | ||||||||| || || Sbjct: 178 aagggtacggccgtcctcaagctgctttccagcaaagataagcctctgctggtctggggg 119 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||| || Sbjct: 118 gatgccctccttgtcctggattttggccttgacattgtcgatggtgtcggatgactccac 59 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatac 398 ||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 58 ctcgagggtaatggtcttgccagtgagggtcttaacgaagatctgcatac 9 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 206 tggactccttctggatgttgtagtc 182
>emb|X60390.1|CGPOLYUGE C.griseus gene for polyubiquitin Length = 1603 Score = 258 bits (130), Expect = 1e-65 Identities = 245/283 (86%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | ||||||||| |||| ||| ||||| ||||| |||||||| ||||| || | Sbjct: 1316 gccacccctgaggcggaggaccaggtgcagggtggactctttctggatgttgtaatcaga 1257 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 |||||||||||||| || |||||||| || ||||||||||| ||||||||||| || || Sbjct: 1256 aagagtgcggccatcttccagctgcttgccggcaaagatgagtcgctgctggtcgggggg 1197 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||| || ||||||||||| ||||||||||| |||||||||||| | ||| || Sbjct: 1196 gatgccctctttatcctggatcttggccttcacattctcgatggtgtcactgggctccac 1137 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1136 ctctagggtgatggtcttgccagtcagggtcttcacgaagatctgcatgccacccctgag 1077 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgta 451 |||||| |||| |||||| ||||||| |||||||||||||| Sbjct: 1076 gcggaggaccaggtgcag-ggtggactctttctggatgttgta 1035 Score = 250 bits (126), Expect = 3e-63 Identities = 244/283 (86%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | ||||||||| |||| ||| ||||| ||||| |||||||| ||||| || | Sbjct: 860 gccacccctgaggcggaggaccaggtgcagggtggactctttctggatgttgtaatcaga 801 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 |||||||||||||| || |||||||| || ||||||||||| ||||||||||| || || Sbjct: 800 aagagtgcggccatcttccagctgcttgccggcaaagatgagtcgctgctggtcgggggg 741 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| ||||||||||| ||||| ||||| |||||||||||| | ||| || Sbjct: 740 gatgccctccttatcctggatcttggccttgacattctcgatggtgtcactgggctccac 681 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| ||||||||||||||||| || |||||||| |||||||||||||| ||||||||||| Sbjct: 680 ctctagggtgatggtcttgccggtcagggtcttcacgaagatctgcatgccacccctgag 621 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgta 451 |||||| |||| |||||| ||||||| |||||||||||||| Sbjct: 620 gcggaggaccaggtgcag-ggtggactctttctggatgttgta 579 Score = 234 bits (118), Expect = 2e-58 Identities = 242/283 (85%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | ||||||||| |||| ||| ||||| ||||| |||||||| ||||| || | Sbjct: 1088 gccacccctgaggcggaggaccaggtgcagggtggactctttctggatgttgtaatcaga 1029 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 |||||||||||||| || |||||||| || ||||||||||| ||||||||||| || || Sbjct: 1028 aagagtgcggccatcttccagctgcttgccggcaaagatgagtcgctgctggtcgggggg 969 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| ||||||||||| ||||| ||||| |||||||||||| | || || Sbjct: 968 gatgccctccttatcctggatcttggccttgacattctcgatggtgtcactgggttccac 909 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| ||||||||||||||||| || |||||||| ||||| |||||||| ||||||||||| Sbjct: 908 ctctagggtgatggtcttgccggtcagggtcttcacgaaaatctgcatgccacccctgag 849 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgta 451 |||||| |||| |||||| ||||||| |||||||||||||| Sbjct: 848 gcggaggaccaggtgcag-ggtggactctttctggatgttgta 807 Score = 234 bits (118), Expect = 2e-58 Identities = 242/283 (85%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | ||||||||| |||| ||| ||||| ||||| |||||||| ||||| || | Sbjct: 632 gccacccctgaggcggaggaccaggtgcagggtggactctttctggatgttgtaatcaga 573 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 |||||||||||||| || |||||||| || ||||||||||| ||||||||||| || || Sbjct: 572 aagagtgcggccatcttccagctgcttgccggcaaagatgagtcgctgctggtcgggggg 513 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| ||||||||||| ||||| ||||| |||||||||||| | || || Sbjct: 512 gatgccctccttatcctggatcttggccttgacattctcgatggtgtcactgggttccac 453 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| ||||||||||||||||| || |||||||| ||||| |||||||| ||||||||||| Sbjct: 452 ctctagggtgatggtcttgccggtcagggtcttcacgaaaatctgcatgccacccctgag 393 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgta 451 |||||| |||| |||||| ||||||| |||||||||||||| Sbjct: 392 gcggaggaccaggtgcag-ggtggactctttctggatgttgta 351 Score = 184 bits (93), Expect = 2e-43 Identities = 194/228 (85%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | ||||||||| |||| ||| ||||| ||||| |||||||| ||||| || | Sbjct: 404 gccacccctgaggcggaggaccaggtgcagggtggactctttctggatgttgtaatcaga 345 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 |||||||||||||| || |||||||| || ||||||||||| ||||||||||| || || Sbjct: 344 aagagtgcggccatcttccagctgcttgccggcaaagatgagtcgctgctggtcgggggg 285 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||| || ||||||||||| ||||| ||||| |||||||||||| | ||| || Sbjct: 284 gatgccctctttatcctggatcttggccttgacattttcgatggtgtcactgggctccac 225 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| ||||||||||||||||| || |||||||| |||||||| ||||| Sbjct: 224 ctctagggtgatggtcttgccggtcagggtcttcacgaagatttgcat 177
>gb|U29158.1|ZMU29158 Zea mays polyubiquitin (MubC5) mRNA, complete cds Length = 1381 Score = 258 bits (130), Expect = 1e-65 Identities = 209/236 (88%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||||||||| |||||||||||| |||||||| || || || ||||||||||| Sbjct: 919 accaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggccatcctcc 860 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 859 agctgcttgccagcaaagatcaggcgctgctggtccggtggaatgccctccttgtcctgg 800 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| ||||||||||||||||| || ||||| ||||| |||||||| |||||| Sbjct: 799 atcttggccttgacattgtcgatggtgtccgaggactccacctcaagggtgatcgtcttg 740 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtg 423 ||||| || ||||| |||||||||||||| ||||||||||| || ||||||| ||| Sbjct: 739 ccagtaagtgtcttcacgaagatctgcatgccacccctgagacgcagcaccaagtg 684 Score = 252 bits (127), Expect = 9e-64 Identities = 233/268 (86%), Gaps = 1/268 (0%) Strand = Plus / Minus Query: 187 caccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctc 246 ||||||||||||||| ||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 464 caccaagtggagggtgctctccttctgaatgttgtagtcggccagcgtgcgcccgtcctc 405 Query: 247 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctg 306 |||||||| ||||||||||| ||||||||||||||||| || || |||||||||||||| Sbjct: 404 gagctgcttgccagcaaagatcaggcgctgctggtccggaggaatcccctccttgtcctg 345 Query: 307 gatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtctt 366 |||||| ||||| || ||||||||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 344 gatcttggccttgacgttgtcgatggtgtcagaagactccacctcgagggtgatagtctt 285 Query: 367 gccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcag 426 |||||||||||||| |||||||||||||| || |||||||||||||| || | ||| || Sbjct: 284 tccagtgagggtcttgacgaagatctgcatgcctcccctgaggcggagaacaaggtggag 225 Query: 427 anttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||| Sbjct: 224 -ggtgctctccttctggatgttgtagtc 198 Score = 234 bits (118), Expect = 2e-58 Identities = 204/233 (87%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||| |||||||||||||||| |||||| || |||||||||||| |||||||| || Sbjct: 1165 ccaccgcggaggcggagcaccaggtggagagtgctctccttctggatgttgtagtctgct 1106 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || |||||||| || ||||||||||| || ||| Sbjct: 1105 agggtgcggccatcctccagctgcttgccggcaaagatcagacgctgctggtctggaggg 1046 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 |||||||| |||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 1045 atgccctctttgtcctggatcttcgccttcacgttgtcgatggtgtcggagctctcaacc 986 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacc 402 |||||||| |||||||||||||| | |||||| || ||||||||||||||||| Sbjct: 985 tccagggttatggtcttgccagtcaaggtcttcacaaagatctgcataccacc 933 Score = 216 bits (109), Expect = 5e-53 Identities = 195/224 (87%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||||||||||||| ||||||||| || |||||||| || || ||||| || ||| Sbjct: 694 agcaccaagtggagggtgctctccttctgaatgttgtagtcggcaagcgtgcgcccgtcc 635 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || |||||||| || ||||| ||||| |||||||||||||| |||||||||||||||||| Sbjct: 634 tcgagctgcttgccggcaaaaatgagccgctgctggtccggagggatgccctccttgtcc 575 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 |||||||| ||||| |||||||| ||||| ||||| ||||| ||||| |||||||| ||| Sbjct: 574 tggatcttggccttgacattgtcaatggtatcagaagactcgacctcaagggtgatagtc 515 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 |||||||| || ||||| |||||||||||||| || |||||||| Sbjct: 514 ttgccagtcagagtcttcacgaagatctgcatgccgcccctgag 471 Score = 198 bits (100), Expect = 1e-47 Identities = 189/219 (86%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| || | ||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 245 gaggcggagaacaaggtggagggtgctctccttctggatgttgtagtcggcaagtgtgcg 186 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || ||||| |||||||| ||||| |||||||| |||||||||||||| || ||||| || Sbjct: 185 cccgtcctcgagctgcttgccagcgaagatgagccgctgctggtccgggggaatgccttc 126 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 125 cttgtcctggatcttggccttgacgttgtcaatggtgtcagaggactccacctcgagggt 66 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 65 gatagtctttccagtgagagtcttgacgaagatctgcat 27 Score = 48.1 bits (24), Expect = 0.025 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 397 accacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| | |||||||||||||| ||| ||| | | ||||||||||||||||||||| Sbjct: 1166 accaccgcggaggcggagcaccaggtggagagt-gctctccttctggatgttgtagtc 1110
>gb|BT016596.1| Zea mays clone Contig429 mRNA sequence Length = 980 Score = 256 bits (129), Expect = 6e-65 Identities = 253/294 (86%), Gaps = 1/294 (0%) Strand = Plus / Minus Query: 161 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttg 220 |||||| | ||||||||||| |||||||| | ||||||||| |||||| ||||| ||| Sbjct: 758 acttactgaccaccacggagacggagcacaaggtggagggtgctctccttttggatgttg 699 Query: 221 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 280 ||||| || | |||||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 698 tagtctgctaaggtgcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 639 Query: 281 tccggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat 340 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 638 tccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatggtgtccgag 579 Query: 341 gactcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatacca 400 ||||||||||||||| ||||| || ||||| |||||||| || |||||||| |||||| Sbjct: 578 ctctcaacctccagggttatggtttttccagtcagggtcttcacaaagatctggatacca 519 Query: 401 cccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||||||||||| ||| || || ||||||||||||||||||||| Sbjct: 518 cccctgaggcggagcaccaggtggag-ggtgctctccttctggatgttgtagtc 466 Score = 254 bits (128), Expect = 2e-64 Identities = 240/277 (86%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||||||||||| ||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 513 gaggcggagcaccaggtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 454 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || |||||||||||||| |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 453 cccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatgccctc 394 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 393 cttgtcctggatcttggccttgacgttgtcaatggtgtcagaggactccacctcgagggt 334 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||| |||||||| || ||||| || || ||||||||||| || ||||||||||||||||| Sbjct: 333 gatagtcttgccggtcagggttttcacaaagatctgcatgcctcccctgaggcggagcac 274 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 | ||| || || ||||||||||||||||||||| Sbjct: 273 aaggtggag-ggtgctctccttctggatgttgtagtc 238 Score = 198 bits (100), Expect = 1e-47 Identities = 189/219 (86%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||||||||| | ||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 285 gaggcggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcg 226 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || ||||||||||| || ||||| |||||||| ||||||||||| || ||||||||||| Sbjct: 225 cccgtcctcaagctgtttgccagcgaagatgagccgctgctggtctggggggatgccctc 166 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 165 cttgtcctggatcttggccttaacgttgtcaatggtgtcagacgactccacctcgagggt 106 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| || ||||| || || ||||||||||| Sbjct: 105 gatagtcttgccggtcagggttttcacaaagatctgcat 67
>dbj|D10432.1|RICK37 Oryza sativa mRNA for ubiquitin (K37 gene), partial sequence Length = 413 Score = 256 bits (129), Expect = 6e-65 Identities = 227/258 (87%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| |||||||||||||| | ||| || || || ||||| ||||||||||||||||| Sbjct: 309 agggtggactccttctggatgtagtaatctgcaagggtgcgaccatcctcaagctgcttg 250 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| |||||||| ||||||||||| ||||| || |||||||||||||||||||| ||| Sbjct: 249 ccagcgaagatgag-cgctgctggtctggtggaataccctccttgtcctggatcttggcc 191 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||||||||| ||||||| |||||||||||||||||| |||||||||| |||||| Sbjct: 190 ttcacattgtcgatcgtgtcaggcgactcaacctccagggtggtggtcttgccggtgagg 131 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| ||||||||||||||||| || | |||||||| |||| ||||| | ||||||| Sbjct: 130 gtcttcacgaagatctgcatacctccacgaaggcggaggaccaagtgca-aggtggactc 72 Query: 437 cttctggatgttgtagtc 454 |||||||||||| ||||| Sbjct: 71 cttctggatgttatagtc 54 Score = 119 bits (60), Expect = 8e-24 Identities = 111/126 (88%), Gaps = 2/126 (1%) Strand = Plus / Minus Query: 323 ttgtcgatggtgtcagatgactcaacctcc-agggtgatggtcttgccagtgagggtctt 381 ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| Sbjct: 412 ttgtcgatggtgtcagaggactcaacctcccagagtgatggtcttgccagtgagggtctt 353 Query: 382 aacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttct 441 ||||||||||||||||| || | ||||| || || | |||||| |||||||||||| Sbjct: 352 cacgaagatctgcatacctccacgaaggcgcaggacaaggtgcag-ggtggactccttct 294 Query: 442 ggatgt 447 |||||| Sbjct: 293 ggatgt 288 Score = 67.9 bits (34), Expect = 3e-08 Identities = 66/77 (85%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| |||||||| | ||| |||||||||||||| || ||||| || || Sbjct: 106 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 47 Query: 233 gtgcggccatcctcaag 249 |||||||| |||||||| Sbjct: 46 gtgcggccgtcctcaag 30
>gb|BT018032.1| Zea mays clone EL01N0530D02.c mRNA sequence Length = 1238 Score = 254 bits (128), Expect = 2e-64 Identities = 240/277 (86%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||||||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 518 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 459 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || |||||||||||||| |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 458 cccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatgccctc 399 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 398 cttgtcctggatcttggccttgacgttgtcaatggtgtcagaggactccacctcgagggt 339 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||| |||||||| || ||||| || || ||||||||||| || ||||||||||||||||| Sbjct: 338 gatagtcttgccggtcagggttttcacaaagatctgcatgcctcccctgaggcggagcac 279 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 | ||| || || ||||||||||||||||||||| Sbjct: 278 aaggtggag-ggtgctctccttctggatgttgtagtc 243 Score = 240 bits (121), Expect = 3e-60 Identities = 218/250 (87%), Gaps = 1/250 (0%) Strand = Plus / Minus Query: 205 ctccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 264 |||||||||||| |||||||| ||||| ||||| || |||||||||||||| |||||||| Sbjct: 719 ctccttctggatgttgtagtcggccagcgtgcgcccgtcctcaagctgctttccagcaaa 660 Query: 265 gatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcacatt 324 |||||| ||||||||||| || || ||||||||||||||||||||||| ||||| || || Sbjct: 659 gatgagccgctgctggtctgggggaatgccctccttgtcctggatcttggccttgacgtt 600 Query: 325 gtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtcttaac 384 |||||||||||| || ||||| ||||| |||||||| || ||||| || |||||||| || Sbjct: 599 gtcgatggtgtctgaagactccacctcgagggtgatagttttgccggtcagggtcttcac 540 Query: 385 gaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctgga 444 |||||||||||| || ||||||||||| ||||||| ||| || || ||||||||||| Sbjct: 539 gaagatctgcatgcctcccctgaggcgcagcaccaagtggag-ggtgctctccttctgga 481 Query: 445 tgttgtagtc 454 |||||||||| Sbjct: 480 tgttgtagtc 471 Score = 220 bits (111), Expect = 3e-54 Identities = 218/254 (85%) Strand = Plus / Minus Query: 161 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttg 220 |||||| | ||||||||||| |||||||| | | ||||||| |||||| ||||| ||| Sbjct: 991 acttactgaccaccacggagacggagcacaagggggagggtgctctccttttggatgttg 932 Query: 221 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 280 ||||| || | | |||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 931 tagtctgctaaggggcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 872 Query: 281 tccggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat 340 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 871 tccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatggtgtccgag 812 Query: 341 gactcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatacca 400 |||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||| Sbjct: 811 ctctcaacctccaggggtatggtttttccagtcagggtcttcacaaagatctgcatacca 752 Query: 401 cccctgaggcggag 414 |||||||||||||| Sbjct: 751 cccctgaggcggag 738 Score = 190 bits (96), Expect = 3e-45 Identities = 188/219 (85%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||||||||| | ||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 290 gaggcggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcg 231 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || ||||||||||| || ||||| |||||||| ||||||||||| || ||||||||||| Sbjct: 230 cccgtcctcaagctgtttgccagcgaagatgagccgctgctggtctggggggatgccctc 171 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| |||| ||||| Sbjct: 170 cttgtcctggatcttggccttaacgttgtcaatggtgtcagacgactccacctggagggt 111 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| || ||||| || || ||||||||||| Sbjct: 110 gatagtcttgccggtcagggttttcacaaagatctgcat 72
>gb|BT017660.1| Zea mays clone EL01N0440E11.c mRNA sequence Length = 997 Score = 254 bits (128), Expect = 2e-64 Identities = 240/277 (86%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||||||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 522 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 463 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 || |||||||||||||| |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 462 cccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatgccctc 403 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 402 cttgtcctggatcttggccttgacgttgtcaatggtgtcagaggactccacctcgagggt 343 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||| |||||||| || ||||| || || ||||||||||| || ||||||||||||||||| Sbjct: 342 gatagtcttgccggtcagggttttcacaaagatctgcatgcctcccctgaggcggagcac 283 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 | ||| || || ||||||||||||||||||||| Sbjct: 282 aaggtggag-ggtgctctccttctggatgttgtagtc 247 Score = 184 bits (93), Expect = 2e-43 Identities = 244/294 (82%), Gaps = 1/294 (0%) Strand = Plus / Minus Query: 161 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttg 220 |||||| | ||||||||||| |||||||| | | |||||| |||||| ||||| ||| Sbjct: 767 acttactgaccaccacggagacggagcacaagggggagggggctctccttttggatgttg 708 Query: 221 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 280 ||||| || | | |||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 707 tagtctgctaaggggcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 648 Query: 281 tccggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat 340 || || || ||||||||||||||||||||||| ||||| || |||||||||||||| || Sbjct: 647 tctgggggaatgccctccttgtcctggatcttggccttgacgttgtcgatggtgtctgaa 588 Query: 341 gactcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatacca 400 ||||| |||| |||||||| || ||||| || |||||||| |||||||||||||| || Sbjct: 587 gactccccctcgagggtgatagttttgccggtcagggtcttcacgaagatctgcatgcct 528 Query: 401 cccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||| ||||||| ||| || || ||||||||||||||||||||| Sbjct: 527 cccctgaggcgcagcaccaagtggag-ggtgctctccttctggatgttgtagtc 475 Score = 168 bits (85), Expect = 1e-38 Identities = 187/220 (85%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||||||||| | ||||||||| |||||||||||| |||||||| || || ||||| Sbjct: 294 gaggcggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcg 235 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccct- 296 || ||||||||||| || ||||| |||||||| ||||||||||| || |||||||||| Sbjct: 234 cccgtcctcaagctgtttgccagcgaagatgagccgctgctggtctggggggatgccctc 175 Query: 297 ccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccaggg 356 || |||||||||||| ||||| || ||||| ||||||||||| ||||| ||||| |||| Sbjct: 174 ccccgtcctggatcttggccttaacgttgtcaatggtgtcagacgactccacctcgaggg 115 Query: 357 tgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||| |||||||| || ||||| || || ||||||||||| Sbjct: 114 tgatagtcttgccggtcagggttttcacaaagatctgcat 75
>dbj|AK067024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091J24, full insert sequence Length = 1189 Score = 254 bits (128), Expect = 2e-64 Identities = 246/285 (86%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||| ||| || | |||||||||||| |||||||||||||| |||||||| || Sbjct: 993 ccaccacagagacgaaacaccaagtggagaagtgactccttctggatgttgtagtcagca 934 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 933 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 874 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||| Sbjct: 873 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 814 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 || ||||||||||||||||| || || ||||| |||||||| ||||| || |||||||| Sbjct: 813 tcgagggtgatggtcttgccggtcagagtcttcacgaagatttgcatgcctcccctgaga 754 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || | ||| || || ||||||||||||||||||||||| Sbjct: 753 cggaggacaaggtgaagcgtt-gactccttctggatgttgtagtc 710 Score = 240 bits (121), Expect = 3e-60 Identities = 245/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||||||||| |||||||||||||| |||||||| || Sbjct: 538 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 479 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 478 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 419 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| || Sbjct: 418 gatgccctctttgtcctggatcttggccttgacgttgtcgatggtgtcagaagactccac 359 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||| |||||||| || || ||||| || ||||||||||| ||||| | ||| Sbjct: 358 ctcaagggtgatagtcttgccggtcagagtcttgacaaagatctgcatgccaccacggag 299 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| || | ||| || | ||||||||||||||||||||||| Sbjct: 298 gcggaggacaaggtgaag-ggtcgactccttctggatgttgtagtc 254 Score = 228 bits (115), Expect = 1e-56 Identities = 218/252 (86%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 732 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 673 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 |||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 672 aagatgagacgctgctggtccgggggaatgccctccttgtcctggatcttggccttgacg 613 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 ||||||||||||||||| || || ||||| ||||||||||||||||| || || ||||| Sbjct: 612 ttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccggtcagtgtcttg 553 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 || ||||||||||| ||||| | ||||||||| || | ||| || ||||||||||||| Sbjct: 552 acaaagatctgcatgccaccacggaggcggaggacaaggtggag-ggtggactccttctg 494 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 493 gatgttgtagtc 482 Score = 216 bits (109), Expect = 5e-53 Identities = 198/228 (86%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||| |||||||||||||||||||| |||||||| || Sbjct: 310 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 251 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 250 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 191 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| || |||||||| ||||| ||||| |||||||||||||| ||||| || Sbjct: 190 gatgccctccttatcttggatcttagccttgacattatcgatggtgtcagaggactccac 131 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| |||||||| || | ||||| || ||||||||||| Sbjct: 130 ctcgagggtgatagtcttgccggtcaatgtcttcacaaagatctgcat 83
>gb|AY103568.1| Zea mays PCO110021 mRNA sequence Length = 865 Score = 254 bits (128), Expect = 2e-64 Identities = 196/219 (89%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||||||||||| ||| || ||||||||||||||||| |||||||| || || ||||| Sbjct: 364 gaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtcggcgagggtgcg 305 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||||||| ||||| || || || ||||||||||||||||||||||| ||||||||||| Sbjct: 304 gccatcctcgagctgtttgccggcgaagatgaggcgctgctggtccggcgggatgccctc 245 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| || Sbjct: 244 cttgtcctggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgt 185 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||| || || |||||||| |||||||||||||| Sbjct: 184 gatggtcttccccgtcagggtcttcacgaagatctgcat 146 Score = 63.9 bits (32), Expect = 4e-07 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 401 cccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 369 cccctgaggcggagcaccaggtgcag-cgtcgactccttctggatgttgtagtc 317
>ref|XM_475630.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 250 bits (126), Expect = 3e-63 Identities = 197/221 (89%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||| | ||||||||| |||||||||||||| |||||||| || || ||| Sbjct: 221 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 162 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| || Sbjct: 161 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggatccct 102 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 101 tccttgtcctggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagc 42 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || || |||||||| |||||||||||||| Sbjct: 41 gtgatggtcttccccgtcagggtcttcacgaagatctgcat 1 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 196 tggactccttctggatgttgtagtc 172
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 250 bits (126), Expect = 3e-63 Identities = 197/221 (89%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||| | ||||||||| |||||||||||||| |||||||| || || ||| Sbjct: 104719 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 104660 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| || Sbjct: 104659 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggatccct 104600 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 104599 tccttgtcctggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagc 104540 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || || |||||||| |||||||||||||| Sbjct: 104539 gtgatggtcttccccgtcagggtcttcacgaagatctgcat 104499 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 104694 tggactccttctggatgttgtagtc 104670
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 250 bits (126), Expect = 3e-63 Identities = 197/221 (89%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||| | ||||||||| |||||||||||||| |||||||| || || ||| Sbjct: 40868 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 40809 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| || Sbjct: 40808 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggatccct 40749 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 40748 tccttgtcctggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagc 40689 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || || |||||||| |||||||||||||| Sbjct: 40688 gtgatggtcttccccgtcagggtcttcacgaagatctgcat 40648 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 40843 tggactccttctggatgttgtagtc 40819
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 250 bits (126), Expect = 3e-63 Identities = 197/221 (89%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||| | ||||||||| |||||||||||||| |||||||| || || ||| Sbjct: 42519 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 42460 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| || Sbjct: 42459 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggatccct 42400 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 42399 tccttgtcctggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagc 42340 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || || |||||||| |||||||||||||| Sbjct: 42339 gtgatggtcttccccgtcagggtcttcacgaagatctgcat 42299 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 42494 tggactccttctggatgttgtagtc 42470
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 250 bits (126), Expect = 3e-63 Identities = 197/221 (89%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||| | ||||||||| |||||||||||||| |||||||| || || ||| Sbjct: 3475237 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 3475178 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| || Sbjct: 3475177 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggatccct 3475118 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 3475117 tccttgtcctggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagc 3475058 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || || |||||||| |||||||||||||| Sbjct: 3475057 gtgatggtcttccccgtcagggtcttcacgaagatctgcat 3475017 Score = 200 bits (101), Expect = 3e-48 Identities = 246/294 (83%), Gaps = 1/294 (0%) Strand = Plus / Plus Query: 161 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttg 220 |||||||||||||||||||| |||||| ||| ||| | ||| |||||||||||||| ||| Sbjct: 8544588 acttacaggccaccacggagacggagcgccaggtgcaaggtggactccttctggatgttg 8544647 Query: 221 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 280 || | || | |||||||||||||| |||||||| ||||||||||| || |||||||| Sbjct: 8544648 taacctgctaaggtgcggccatcctcgagctgcttgccagcaaagatcagtcgctgctga 8544707 Query: 281 tccggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat 340 ||||| || ||||||||||||||||| |||||||| ||||| ||||| || ||||| || Sbjct: 8544708 tccgggggaatgccctccttgtcctgaatctttgctttcacgttgtcaattgtgtccgac 8544767 Query: 341 gactcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatacca 400 ||||||||||||| ||| ||||| ||||| || | ||||| || ||||| ||||| ||| Sbjct: 8544768 gactcaacctccaaggtaatggttttgccggtcaatgtcttgacaaagatttgcattcca 8544827 Query: 401 cccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | |||||| | ||| || | |||||||||||||| |||||||| Sbjct: 8544828 cccctgagcctgagcactaggtgaag-ggtagactccttctggatattgtagtc 8544880 Score = 165 bits (83), Expect = 2e-37 Identities = 187/222 (84%) Strand = Plus / Plus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||| | ||| ||||| |||||||||||||| |||||||| ||||| ||||| || || Sbjct: 8544839 gagcactaggtgaagggtagactccttctggatattgtagtcagccagggtgcgtccgtc 8544898 Query: 244 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtc 303 || |||||||| || || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 8544899 cttgagctgcttgccggcgaagatgaggcgctgctggtccggggggatgccctccttgtc 8544958 Query: 304 ctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggt 363 || ||||| |||||| |||||| ||| || ||||| ||||| ||||| || || ||||| Sbjct: 8544959 ctaaatcttcgccttctcattgttgattgtatcagaagactcgacctcaagcgtaatggt 8545018 Query: 364 cttgccagtgagggtcttaacgaagatctgcataccacccct 405 ||| || || |||||||| || || |||||||| || ||||| Sbjct: 8545019 ctttccggtcagggtcttgacaaaaatctgcatgcctcccct 8545060 Score = 141 bits (71), Expect = 2e-30 Identities = 170/204 (83%), Gaps = 7/204 (3%) Strand = Plus / Plus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| ||||| ||||| || ||||| || || || ||||| || |||||||| || Sbjct: 8545307 gtggagggtggactctttctgaatgttgtaatctgcgagggtgcgtccgtcctcaagttg 8545366 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| || ||||||||||||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 8545367 cttgcccgcaaagatgaggcgctgctggtcaggtggaataccctccttgtcctgaatctt 8545426 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 ||||| |||||||| || |||||||| |||||||||| ||||| |||||||| Sbjct: 8545427 ggccttgacattgtcaatcgtgtcagaggactcaacctt-------atggtattgccagt 8545479 Query: 373 gagggtcttaacgaagatctgcat 396 ||| ||||| || ||||||||||| Sbjct: 8545480 gagtgtcttcacaaagatctgcat 8545503 Score = 121 bits (61), Expect = 2e-24 Identities = 166/197 (84%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 218 ttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgagg-cgctg 276 ||||||||||||| || || ||||||||||||||||| ||||||||||| | | ||||| Sbjct: 8545101 ttgtagtccgccaaggtccgaccatcctcaagctgcttgccagcaaagataaagacgctg 8545160 Query: 277 ctggtccggtggg-atgccctccttgtcctggatctttgccttcacattgtcgatggtgt 335 |||||| || ||| || | |||||| |||||||||||||||||||| ||||| || |||| Sbjct: 8545161 ctggtcagggggggatacactccttatcctggatctttgccttcacgttgtcaatcgtgt 8545220 Query: 336 cagatgactcaacctccagggtgat-ggtcttgccagtgagggtcttaacgaagatctgc 394 | || ||||||||||||| ||||| |||||| | || | |||||| || ||||||||| Sbjct: 8545221 ctgaggactcaacctccaaagtgatgggtctttcttgtcaaggtcttcacaaagatctgc 8545280 Query: 395 ataccacccctgaggcg 411 || || ||||||||||| Sbjct: 8545281 attcctcccctgaggcg 8545297 Score = 105 bits (53), Expect = 1e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||||| ||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct: 22310754 cggaggcggagcaccaggtgaagcgtcgactccttctggatgttgtagtcggccagcgtg 22310813 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 291 | ||| || || |||||||| || || |||||||| |||||||| ||||| ||||| Sbjct: 22310814 cagccgtcttccagctgcttccccgcgaagatgagccgctgctgatccggcgggat 22310869 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 3475212 tggactccttctggatgttgtagtc 3475188 Score = 46.1 bits (23), Expect = 0.099 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| || | ||||||||||||||||||||||| Sbjct: 22310756 gaggcggagcaccaggtgaag-cgtcgactccttctggatgttgtagtc 22310803
>dbj|AK119731.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-158-A01, full insert sequence Length = 735 Score = 250 bits (126), Expect = 3e-63 Identities = 197/221 (89%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||| | ||||||||| |||||||||||||| |||||||| || || ||| Sbjct: 291 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 232 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| || Sbjct: 231 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggatccct 172 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 171 tccttgtcctggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagc 112 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || || |||||||| |||||||||||||| Sbjct: 111 gtgatggtcttccccgtcagggtcttcacgaagatctgcat 71 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 266 tggactccttctggatgttgtagtc 242
>emb|Z24723.1|PCUBIQGNA P.chrysosporium ubiquitin gene, complete CDS Length = 2054 Score = 248 bits (125), Expect = 1e-62 Identities = 184/204 (90%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| |||||||||||||| ||||| || | || |||||||||||||||||||| Sbjct: 576 gtggagggtggactccttctggatgttgtaatcggagagggtgcggccatcctcaagctg 517 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| || ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 516 cttgccggcaaagatgagacgctgctggtctggtgggatgccctccttgtcctggatctt 457 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 ||||| || ||||||||||||||||| ||||| ||||| ||||||||||||||||| || Sbjct: 456 ggccttgacgttgtcgatggtgtcagaggactcgacctcgagggtgatggtcttgcccgt 397 Query: 373 gagggtcttaacgaagatctgcat 396 ||| ||||| |||||||||||||| Sbjct: 396 gagagtcttcacgaagatctgcat 373 Score = 186 bits (94), Expect = 4e-44 Identities = 189/221 (85%) Strand = Plus / Minus Query: 194 tggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgc 253 ||||| || |||||||||||||| ||||| || | || || ||||| ||||| |||||| Sbjct: 855 tggagagtagactccttctggatgttgtaatcggacaacgtacggccgtcctcgagctgc 796 Query: 254 ttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatcttt 313 || |||||||||||||| |||||||||||||| || ||||| ||||||||||||||||| Sbjct: 795 ttgccagcaaagatgagacgctgctggtccggaggaatgccttccttgtcctggatcttg 736 Query: 314 gccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtg 373 ||||||||||| || |||||||| || ||||| ||||| || |||||||||||||| || Sbjct: 735 gccttcacattatcaatggtgtcggaagactcgacctcgagcgtgatggtcttgcccgtc 676 Query: 374 agggtcttaacgaagatctgcataccacccctgaggcggag 414 |||||||| || ||||||||||| || |||| ||| ||||| Sbjct: 675 agggtcttgacaaagatctgcatgccgccccggagacggag 635 Score = 182 bits (92), Expect = 7e-43 Identities = 178/207 (85%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| ||||| |||||||| ||||| |||| || ||||||||||| || ||||| Sbjct: 1134 gtggagggtagactctttctggatattgtaatccgaaagcgtgcggccatcttcgagctg 1075 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| || || ||||| ||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 1074 cttgccggcgaagatcaggcgctgctgatccggagggatgccctccttgtcctgaatctt 1015 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 ||||| || |||||||| ||||| || ||||| ||||| || ||||| ||||| || || Sbjct: 1014 ggccttgacgttgtcgatcgtgtccgacgactcgacctcaagagtgatcgtcttacccgt 955 Query: 373 gagggtcttaacgaagatctgcatacc 399 ||||||||| ||||||||||||||||| Sbjct: 954 gagggtcttgacgaagatctgcatacc 928 Score = 180 bits (91), Expect = 3e-42 Identities = 177/206 (85%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| |||||||||||||| || ||||||| |||||||| || ||||| ||||||||| Sbjct: 1358 agggtagactccttctggatgttatagtccgaaagagtgcgaccgtcctccagctgctta 1299 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| |||||||||||||||||||| || || || ||||||||||| |||||||| ||| Sbjct: 1298 ccagcgaagatgaggcgctgctggtctgggggaataccctccttgtcttggatcttcgcc 1239 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 || || ||||| |||||||| || ||||| ||||| || ||||| |||||||| || | Sbjct: 1238 ttgacgttgtcaatggtgtccgaagactcgacctcgagcgtgatcgtcttgccggtcaac 1179 Query: 377 gtcttaacgaagatctgcataccacc 402 ||||| |||||||||||||||||||| Sbjct: 1178 gtcttcacgaagatctgcataccacc 1153 Score = 145 bits (73), Expect = 1e-31 Identities = 198/240 (82%) Strand = Plus / Minus Query: 163 ttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgta 222 |||||| ||||||||||| || ||||| | ||| || || |||||||||||| ||||| Sbjct: 1672 ttacagaccaccacggagacgaagcacgaggtgaagcgtgctctccttctggatgttgta 1613 Query: 223 gtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 282 ||| | || || || || ||||| || ||||| || || ||||| || ||||||||||| Sbjct: 1612 gtcggagagggtacgcccgtcctcgagttgcttgccggcgaagatcagacgctgctggtc 1553 Query: 283 cggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatga 342 || |||||||| |||||||| |||||||||||||| || |||||||| ||||| || || Sbjct: 1552 gggcgggatgccttccttgtcttggatctttgccttgacgttgtcgatcgtgtcggaaga 1493 Query: 343 ctcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacc 402 ||||||||| ||||| || |||||||| ||||| |||||||| ||||| ||||| ||||| Sbjct: 1492 ctcaacctcgagggtaatcgtcttgccggtgagcgtcttaacaaagatttgcatgccacc 1433 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgta 451 |||||||||||||||||||||| Sbjct: 568 tggactccttctggatgttgta 547 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 ctccttctggatgttgtagtc 454 ||||||||||||||||||||| Sbjct: 1630 ctccttctggatgttgtagtc 1610 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 gactccttctggatgttgta 451 |||||||||||||||||||| Sbjct: 846 gactccttctggatgttgta 827
>emb|X60826.1|CRUBI3 C.reinhardtii UBI3 mRNA for ubiquitin-fusion protein (UbCEP52) Length = 730 Score = 248 bits (125), Expect = 1e-62 Identities = 190/212 (89%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||| ||||||||| |||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 218 agcaccaggtggagggtggactccttctggatgttgtagtccgccagggtgcggccgtcc 159 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || |||||||| || || ||||| || |||||||||||||| |||||||||||||||||| Sbjct: 158 tccagctgcttgccggcgaagatcagacgctgctggtccggagggatgccctccttgtcc 99 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 || ||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||||| Sbjct: 98 tgaatcttggccttcacattctcgatggtgtccgaagactccacctccagggtgatggtc 39 Query: 365 ttgccagtgagggtcttaacgaagatctgcat 396 || || ||||||||||| |||||||| ||||| Sbjct: 38 ttacccgtgagggtcttcacgaagatttgcat 7 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 202 tggactccttctggatgttgtagtc 178
>gb|AY103543.1| Zea mays PCO110026 mRNA sequence Length = 1623 Score = 248 bits (125), Expect = 1e-62 Identities = 234/270 (86%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||||||||||||| ||||||||| || |||||||| ||||| ||||| |||||| Sbjct: 564 agcaccaagtggagggtgctctccttctgaatgttgtagtcggccagcgtgcgcccatcc 505 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || | |||||| || ||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 504 tccaactgcttgccggcaaaaatgagacgttgctggtccggagggatgccctccttgtcc 445 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 |||||||||||||| |||||||| |||||||| || ||||| ||||| |||||||| ||| Sbjct: 444 tggatctttgccttgacattgtcaatggtgtctgaggactccacctcaagggtgattgtc 385 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgc 424 |||||||| | |||||| || ||||||||||| || ||||| ||||| ||||||| ||| Sbjct: 384 ttgccagtcaaggtcttgacaaagatctgcatgcctcccctaaggcgcagcaccaagtgg 325 Query: 425 aganttggactccttctggatgttgtagtc 454 || || ||||||||||||||||||||||| Sbjct: 324 agggtt-gactccttctggatgttgtagtc 296 Score = 236 bits (119), Expect = 5e-59 Identities = 193/218 (88%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||||||||||||| |||||||||||||| |||||||| || || ||||| Sbjct: 342 aggcgcagcaccaagtggagggttgactccttctggatgttgtagtcagcaagtgtgcgt 283 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 || |||||||||||||| || || ||||| || ||||||||||| || |||||||||||| Sbjct: 282 ccgtcctcaagctgcttgccggcgaagataagccgctgctggtcaggagggatgccctcc 223 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||| |||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 222 ttgtcctggatcttagccttgacattgtcaatggtgtcagaagactccacctcgagggtg 163 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 || |||||||| ||||||||||| || ||||||||||| Sbjct: 162 atagtcttgccggtgagggtcttcacaaagatctgcat 125 Score = 228 bits (115), Expect = 1e-56 Identities = 207/238 (86%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||||||||| |||||||||||| |||||||| || || ||||| ||| Sbjct: 1251 cggagcaccaggtggagggtgctctccttctggatattgtagtctgcaagggtgcgacca 1192 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 ||||| |||||||| || || ||||| || ||||||||||| || || || ||||||||| Sbjct: 1191 tcctccagctgcttgccggcgaagatcagacgctgctggtctgggggaatcccctccttg 1132 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 1131 tcctggatcttagccttcacgttgtcgatggtgtcagagctctcaacctccagggttatg 1072 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacca 419 ||||||||||| | |||||| || |||||||||||||| ||||| ||||||||||||| Sbjct: 1071 gtcttgccagtcaaggtcttcacaaagatctgcataccgcccctcaggcggagcacca 1014 Score = 222 bits (112), Expect = 8e-55 Identities = 212/246 (86%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||||||||| ||||||||| || ||||| ||||| || ||||| Sbjct: 799 gaggcgcagcaccaggtggagggtgctctccttctgaatgttgtaatccgcaagggtgcg 740 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||||| |||||||| || |||||||| || |||||||||||||| ||||||||||| Sbjct: 739 tccatcctccagctgcttgccggcaaagataagacgctgctggtccggcgggatgccctc 680 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| |||||||| ||||| || || ||||| ||||| || || Sbjct: 679 cttgtcctggatcttggccttgacattgtcaatggtatctgaagactccacctcaagagt 620 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||||||||||||||| ||||| || || |||||||||||||||||||| || || ||||| Sbjct: 619 gatggtcttgccagtaagggttttcacaaagatctgcataccacccctaagacgcagcac 560 Query: 418 cangtg 423 || ||| Sbjct: 559 caagtg 554 Score = 220 bits (111), Expect = 3e-54 Identities = 211/245 (86%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||||||||||| |||||||| |||||||||||| ||||| || || || ||||| Sbjct: 1026 aggcggagcaccagatggagggtgctctccttctggatgttgtaatctgcaagggtgcga 967 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 |||||||| |||||||| || || |||||||| |||||||||||||| ||||| |||||| Sbjct: 966 ccatcctccagctgcttgccggcgaagatgagccgctgctggtccggggggataccctcc 907 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || |||||||| || ||||||||||| |||| Sbjct: 906 ttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacctccaaggtg 847 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| | ||||| |||||||||||||| || ||||||||||| |||||| Sbjct: 846 atggtcttgccagtcaatgtcttcacgaagatctgcattcctcccctgaggcgcagcacc 787 Query: 419 angtg 423 | ||| Sbjct: 786 aggtg 782
>gb|AF053563.1|AF053563 Mesembryanthemum crystallinum ubiquitin mRNA, partial cds Length = 543 Score = 248 bits (125), Expect = 1e-62 Identities = 243/282 (86%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||||||||| || | ||||||||| |||||||| ||||| |||||||| ||| Sbjct: 329 ccaccacggaggcggaggacaaggtggagggtggactccttttggatattgtagtcagcc 270 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 | ||||| || |||||||| ||||| ||||||||||| | | ||||||||| || ||| Sbjct: 269 aaggtgcgcccgtcctcaagttgcttcccagcaaagatcaacctctgctggtctggcggg 210 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||||||||| |||||||||||||| |||||||| || ||||||| Sbjct: 209 atcccctccttgtcctggatcttagccttcacattgtcaatggtgtccgagctctcaacc 150 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||||||||||||||||||||| | |||||| || |||||||||||||| ||||| | Sbjct: 149 tccagggtgatggtcttgccagtcaaggtcttcacaaagatctgcatacctcccctcaaa 90 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgta 451 |||||||||| ||| ||| |||||||||| ||||||||||| Sbjct: 89 cggagcaccaagtggagag-tggactccttttggatgttgta 49 Score = 69.9 bits (35), Expect = 7e-09 Identities = 64/74 (86%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||||||||||||||| || |||||||| ||||| ||||| |||||||| || | ||| Sbjct: 89 cggagcaccaagtggagagtggactccttttggatgttgtaatccgccagggtcctccca 30 Query: 242 tcctcaagctgctt 255 |||||||| ||||| Sbjct: 29 tcctcaagttgctt 16
>gb|AF361365.1| Oncorhynchus mykiss polyubiquitin mRNA, complete cds Length = 1162 Score = 246 bits (124), Expect = 5e-62 Identities = 227/261 (86%), Gaps = 1/261 (0%) Strand = Plus / Minus Query: 194 tggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgc 253 |||||||| |||||||||||||| |||||||| | |||||||| ||||| || |||||| Sbjct: 487 tggagggtggactccttctggatgttgtagtcggagagagtgcgaccatcttccagctgc 428 Query: 254 ttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatcttt 313 || || |||||||| | |||||||||||| || |||||||||||||||||||||||||| Sbjct: 427 ttgccggcaaagatcaagcgctgctggtctggggggatgccctccttgtcctggatcttg 368 Query: 314 gccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtg 373 ||||||||||| || ||||||||| | ||||||||||||||||||||||||||| || Sbjct: 367 gccttcacattctcaatggtgtcactgggctcaacctccagggtgatggtcttgccggta 308 Query: 374 agggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttgga 433 |||||||| ||||||||||||||||||||||| || |||||||| | || || |||| Sbjct: 307 agggtcttcacgaagatctgcataccacccctcagacggagcacaagatggag-ggtgga 249 Query: 434 ctccttctggatgttgtagtc 454 ||||||||||||||| ||||| Sbjct: 248 ctccttctggatgttatagtc 228 Score = 238 bits (120), Expect = 1e-59 Identities = 226/261 (86%), Gaps = 1/261 (0%) Strand = Plus / Minus Query: 194 tggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgc 253 |||||||| |||||||||||||| |||||||| | |||||||| ||||| || |||||| Sbjct: 715 tggagggtggactccttctggatgttgtagtcggagagagtgcgaccatcttccagctgc 656 Query: 254 ttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatcttt 313 || || |||||||| | |||||||||||| || |||||||||||||||||||||||||| Sbjct: 655 ttgccggcaaagatcaagcgctgctggtctggggggatgccctccttgtcctggatcttg 596 Query: 314 gccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtg 373 ||||||||||| || ||||||||| | ||||||||||||||||||||||||||| || Sbjct: 595 gccttcacattctcaatggtgtcactgggctcaacctccagggtgatggtcttgccggta 536 Query: 374 agggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttgga 433 |||||||| ||||||||||||||||| ||||| || || ||||| | || || |||| Sbjct: 535 agggtcttcacgaagatctgcatacctcccctcagacgaagcacaagatggag-ggtgga 477 Query: 434 ctccttctggatgttgtagtc 454 ||||||||||||||||||||| Sbjct: 476 ctccttctggatgttgtagtc 456 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||| || || |||| ||| || || |||||||||||||| |||||||| | Sbjct: 968 gccaccacggagacgcaggaccaggtgaagagtggactccttctggatgttgtagtcaga 909 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||| ||||| || |||||||||||||| ||||| | |||||||||||| || || Sbjct: 908 gagcgtgcgaccatcttccagctgcttaccagcgaagatcaagcgctgctggtctggggg 849 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||| ||||| || || |||||||||||| | ||| || Sbjct: 848 gatgccctccttgtcctggatcttggccttgacgttctcgatggtgtcactgggctcgac 789 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||| || Sbjct: 788 ctccagggtgatggtcttgccggtaagggtcttcacgaagatctgcatacctcccctcag 729 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | || || ||||||||||||||||||||||||| Sbjct: 728 acggagcacaagatggag-ggtggactccttctggatgttgtagtc 684 Score = 190 bits (96), Expect = 3e-45 Identities = 176/203 (86%) Strand = Plus / Minus Query: 194 tggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgc 253 |||||||| |||||||||||||| || ||||| | |||||||| ||||| || |||||| Sbjct: 259 tggagggtggactccttctggatgttatagtcggagagagtgcgaccatcttccagctgc 200 Query: 254 ttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatcttt 313 ||||| || ||||| | |||||||||||| || |||||||||||||||||||||||||| Sbjct: 199 ttaccggcgaagatcaagcgctgctggtctggggggatgccctccttgtcctggatcttg 140 Query: 314 gccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtg 373 ||||||||||| |||||||||||| | ||| ||||||||||||||||||||||| || Sbjct: 139 gccttcacattctcgatggtgtcactgggctcgacctccagggtgatggtcttgccggta 80 Query: 374 agggtcttaacgaagatctgcat 396 || ||||| || ||||||||||| Sbjct: 79 agtgtcttcacaaagatctgcat 57
>emb|X92422.1|ZMUBIS27F Z.mays mRNA for ubiquitin/ribosomal protein S27a fusion protein Length = 777 Score = 246 bits (124), Expect = 5e-62 Identities = 195/219 (89%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||||| |||| ||| || ||||||||||||||||| |||||||| || || ||||| Sbjct: 309 gaggcggacgaccaggtgcagcgtcgactccttctggatgttgtagtcggcgagggtgcg 250 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||||||| |||||||| || || ||||||||||||||||||||||| ||||||||||| Sbjct: 249 gccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggcgggatgccctc 190 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| || Sbjct: 189 cttgtcctggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgt 130 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||| || || |||||||| |||||||||||||| Sbjct: 129 gatggtcttccccgtcagggtcttcacgaagatctgcat 91 Score = 48.1 bits (24), Expect = 0.025 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 401 cccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||||| |||| |||||| | | |||||||||||||||||||||| Sbjct: 314 cccctgaggcggacgaccaggtgcagcgtcg-actccttctggatgttgtagtc 262
>dbj|AK108207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D06, full insert sequence Length = 686 Score = 246 bits (124), Expect = 5e-62 Identities = 201/227 (88%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 279 ccaccacgcaggcggagcacgaggtggagggtcgactccttctggatgttgtagtccgaa 220 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||| ||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 219 agggtgcggccgtcctcgagctgcttaccggcgaagataaggcgctgctggtcagggggg 160 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||| ||| Sbjct: 159 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgaagactccacc 100 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 || |||||||||||||| || || |||||||| || ||||||||||| Sbjct: 99 tcaagggtgatggtcttacccgtaagggtcttgacaaagatctgcat 53 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 gactccttctggatgttgtagtc 454 ||||||||||||||||||||||| Sbjct: 246 gactccttctggatgttgtagtc 224
>gb|BT016557.1| Zea mays clone Contig390 mRNA sequence Length = 981 Score = 244 bits (123), Expect = 2e-61 Identities = 238/276 (86%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||||||||||||| |||||||||||||| |||||||| || || ||||| Sbjct: 485 aggcgcagcaccaagtggagggttgactccttctggatgttgtagtcagcaagtgtgcgt 426 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 || |||||||||||||| || || ||||| || ||||||||||| || |||||||||||| Sbjct: 425 ccgtcctcaagctgcttgccggcgaagataagccgctgctggtcaggagggatgccctcc 366 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||| ||||| || |||||||| || ||||| ||||| |||||| Sbjct: 365 ttgtcctggatcttagccttgacattatcaatggtgtctgaagactccacctcaagggtg 306 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 || ||||||||||| | |||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 305 attgtcttgccagtcaaggtcttgacaaagatctgcatgcctcccctaaggcgcagcacc 246 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | || || || ||||||||||||||||||||||| Sbjct: 245 aaatgaagggtt-gactccttctggatgttgtagtc 211 Score = 240 bits (121), Expect = 3e-60 Identities = 233/270 (86%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||||||||||||| |||||||||||| |||||||| || || || | |||||| Sbjct: 707 agcaccaagtggagggtgctctccttctggatgttgtagtcagcaagggtcctcccatcc 648 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || | |||||| || ||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 647 tccaactgcttgccggcaaagatgagacgttgctggtcaggtgggatgccctccttgtcc 588 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 |||||||||||||| |||||||| |||||||| || ||||| ||||| |||||||| ||| Sbjct: 587 tggatctttgccttgacattgtcaatggtgtctgaggactccacctcaagggtgattgtc 528 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgc 424 |||||||| | |||||| || ||||||||||| || ||||| ||||| ||||||| ||| Sbjct: 527 ttgccagtcaaggtcttgacaaagatctgcatgcctcccctaaggcgcagcaccaagtgg 468 Query: 425 aganttggactccttctggatgttgtagtc 454 || || ||||||||||||||||||||||| Sbjct: 467 agggtt-gactccttctggatgttgtagtc 439 Score = 228 bits (115), Expect = 1e-56 Identities = 192/218 (88%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| |||||||| || ||||| |||||||||||||| |||||||| || || |||||| Sbjct: 257 aggcgcagcaccaaatgaagggttgactccttctggatgttgtagtcagcaagtgtgcgg 198 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 || |||||||||||||| || || ||||| || ||||||||||| || |||||||||||| Sbjct: 197 ccgtcctcaagctgcttgccggcgaagataagccgctgctggtcaggagggatgccctcc 138 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||| |||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 137 ttgtcctggatcttagccttgacattgtcaatggtgtcagaagactccacctcgagggtg 78 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 || |||||||| ||||||||||| || ||||||||||| Sbjct: 77 atagtcttgccggtgagggtcttcacaaagatctgcat 40
>emb|X08013.1|CSUBIQ Chinese hamster mRNA for ubiquitin Length = 752 Score = 244 bits (123), Expect = 2e-61 Identities = 229/264 (86%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||| ||||| |||||||| ||||| || | |||||||||||||| || Sbjct: 749 accaggtgcagggtggactctttctggatgttgtaatcagaaagagtgcggccatcttcc 690 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| ||||||||||| || ||||||||||| || |||||| Sbjct: 689 agctgcttgccggcaaagatgagtcgctgctggtcgggggggatgccctctttatcctgg 630 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 629 atcttggccttcacattctcgatggtgtcactgggctccacctctagggtgatggtcttg 570 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 ||||| |||||||| |||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 569 ccagtcagggtcttcacgaagatctgcatgccacccctgaggcggaggaccaggtgcag- 511 Query: 428 nttggactccttctggatgttgta 451 ||||||| |||||||||||||| Sbjct: 510 ggtggactctttctggatgttgta 487 Score = 234 bits (118), Expect = 2e-58 Identities = 242/283 (85%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | ||||||||| |||| ||| ||||| ||||| |||||||| ||||| || | Sbjct: 540 gccacccctgaggcggaggaccaggtgcagggtggactctttctggatgttgtaatcaga 481 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 |||||||||||||| || |||||||| || ||||||||||| ||||||||||| || || Sbjct: 480 aagagtgcggccatcttccagctgcttgccggcaaagatgagtcgctgctggtcgggggg 421 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| ||||||||||| ||||| ||||| |||||||||||| | || || Sbjct: 420 gatgccctccttatcctggatcttggccttgacattctcgatggtgtcactgggttccac 361 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| ||||||||||||||||| || |||||||| ||||| |||||||| ||||||||||| Sbjct: 360 ctctagggtgatggtcttgccggtcagggtcttcacgaaaatctgcatgccacccctgag 301 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgta 451 |||||| |||| |||||| ||||||| |||||||||||||| Sbjct: 300 gcggaggaccaggtgcag-ggtggactctttctggatgttgta 259 Score = 184 bits (93), Expect = 2e-43 Identities = 194/228 (85%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | ||||||||| |||| ||| ||||| ||||| |||||||| ||||| || | Sbjct: 312 gccacccctgaggcggaggaccaggtgcagggtggactctttctggatgttgtaatcaga 253 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 |||||||||||||| || |||||||| || ||||||||||| ||||||||||| || || Sbjct: 252 aagagtgcggccatcttccagctgcttgccggcaaagatgagtcgctgctggtcgggggg 193 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||| || ||||||||||| ||||| ||||| |||||||||||| | ||| || Sbjct: 192 gatgccctctttatcctggatcttggccttgacattttcgatggtgtcactgggctccac 133 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| ||||||||||||||||| || |||||||| |||||||| ||||| Sbjct: 132 ctctagggtgatggtcttgccggtcagggtcttcacgaagatttgcat 85
>gb|AF506969.1| Equus caballus ubiquitin mRNA, complete cds Length = 1157 Score = 242 bits (122), Expect = 8e-61 Identities = 243/283 (85%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | ||| |||||||||| ||| ||||||||||| |||||||| ||||| || | Sbjct: 1030 gccacccctgagacggagcaccaggtgcagggtcgactctttctggatgttgtaatcaga 971 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 |||||||||||||| || |||||||| || ||||||||||| | ||||||||| || || Sbjct: 970 aagagtgcggccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggg 911 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||| ||||||||||| ||||||||||| ||||||||||| | ||| || Sbjct: 910 gatgccctccttatcctggatcttggccttcacattctcgatggtgtcgctgggctccac 851 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| ||||| |||||||| ||||| ||||| Sbjct: 850 ctccagggtgatggtcttgccggtcagggtcttcacgaaaatctgcatcccacctctgag 791 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgta 451 || || |||| ||||||| |||||||||||||||||||||| Sbjct: 790 acgcagaaccaggtgcagag-tggactccttctggatgttgta 749 Score = 204 bits (103), Expect = 2e-49 Identities = 215/252 (85%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| ||||| || | ||| ||||| |||||||| |||||||| || ||| Sbjct: 768 gactccttctggatgttgtaatcagacagggtgcgcccatcctccagctgcttgcctgca 709 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 ||||||| | ||||||||| || |||||||||||||| ||||||||||| ||||||||| Sbjct: 708 aagatgaacctctgctggtcgggggggatgccctccttatcctggatcttggccttcaca 649 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 || ||||||||||| | ||| ||||||||||| ||||||||||| || |||||||| Sbjct: 648 ttctcgatggtgtcgctgggctccacctccagggtaatggtcttgccggtcagggtcttc 589 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 ||||| |||||||| || || ||||| || || |||| ||||||| ||||||||||||| Sbjct: 588 acgaaaatctgcatcccgcctctgagacgcagaaccaggtgcagag-tggactccttctg 530 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 529 gatgttgtagtc 518 Score = 198 bits (100), Expect = 1e-47 Identities = 212/249 (85%), Gaps = 1/249 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| | ||| ||||| |||||||| |||||||| || ||| Sbjct: 540 gactccttctggatgttgtagtcagacagggtgcgcccatcctccagctgcttgcctgca 481 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 |||||||| | ||||||||| || |||||||||||||| ||||||||||| ||||| || Sbjct: 480 aagatgagcctctgctggtcgggggggatgccctccttatcctggatcttggccttgacg 421 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 || ||||||||||| | ||| ||||||||||||||||||||||| || |||||||| Sbjct: 420 ttctcgatggtgtcgctgggctccacctccagggtgatggtcttgccggtcagggtcttc 361 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 ||||| ||||||||||| || || ||||| ||||||| |||||| | ||||| ||||| Sbjct: 360 acgaaaatctgcataccgcctctcaggcgcagcaccaggtgcag-ggtcgactctttctg 302 Query: 443 gatgttgta 451 ||||||||| Sbjct: 301 gatgttgta 293 Score = 180 bits (91), Expect = 3e-42 Identities = 186/218 (85%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||||||||| |||||||| ||||| || | ||||||||| Sbjct: 336 aggcgcagcaccaggtgcagggtcgactctttctggatgttgtaatcggaaagagtgcgg 277 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||||||| Sbjct: 276 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccctcc 217 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| ||||| || || ||||||||||| | ||| |||||||||||| Sbjct: 216 ttatcctggatcttggccttgacgttctcgatggtgtcgctgggctccacctccagggtg 157 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| || ||||||||||| Sbjct: 156 atggtcttgccggtcagggtcttcacaaagatctgcat 119
>emb|X87156.1|APOLYUBIQ Acanthamoeba sp. 4b3 polyubiquitin gene Length = 2388 Score = 240 bits (121), Expect = 3e-60 Identities = 245/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||| ||||| || | |||||| ||||||||||||||||| |||||||| || Sbjct: 2329 gccaccacggagacggaggacgaggtggagagtcgactccttctggatgttgtagtcggc 2270 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || |||||||| ||||||||||||||||| || |||||||||||||||||||| || || Sbjct: 2269 gagcgtgcggccgtcctcaagctgcttaccggcgaagatgaggcgctgctggtcgggggg 2210 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 || |||||||||||||||||||| |||||| || ||||| ||||| || ||||| || Sbjct: 2209 aataccctccttgtcctggatcttctgcttcacgttctcgatcgtgtcggacgactcgac 2150 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||||||||| || ||||||||||| ||||||||||||||||| || | || Sbjct: 2149 ctcgagggtgatggtcttaccggtgagggtcttcacgaagatctgcataccgccacgaag 2090 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || | ||| || ||||||||||||||||||||||||| Sbjct: 2089 acggaggacgaggtggag-ggtggactccttctggatgttgtagtc 2045 Score = 184 bits (93), Expect = 2e-43 Identities = 176/204 (86%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| |||||||||||||| |||||||| || || |||||||| ||||| ||||| Sbjct: 2077 gtggagggtggactccttctggatgttgtagtcggcgagggtgcggccgtcctcgagctg 2018 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 |||||| || |||||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 2017 cttaccggcgaagatgagacgctgctgatcgggagggatgccctccttgtcctggatctt 1958 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 | |||||| || |||||||| || ||||| ||||| ||||||||||||||||| || Sbjct: 1957 ttgcttcacgttctcgatggtatcgctcgactcgacctcgagggtgatggtcttgccggt 1898 Query: 373 gagggtcttaacgaagatctgcat 396 |||||||| |||||||| ||||| Sbjct: 1897 cagggtcttcacgaagatttgcat 1874 Score = 83.8 bits (42), Expect = 5e-13 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 347 acctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctg 406 ||||| ||||||||||||||||| || || ||||| |||||||||||||| ||||| | | Sbjct: 2379 acctcgagggtgatggtcttgccggtcagcgtcttgacgaagatctgcatgccaccacgg 2320 Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || ||||| || | ||| ||| | ||||||||||||||||||||||| Sbjct: 2319 agacggaggacgaggtggagag-tcgactccttctggatgttgtagtc 2273
>emb|X15427.1|CRUBIRP Chlamydomonas reinhardtii UBI1-ribosomal protein fusion mRNA Length = 689 Score = 240 bits (121), Expect = 3e-60 Identities = 189/212 (89%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||| ||||||||| |||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 220 agcaccaggtggagggtggactccttctggatgttgtagtccgccagggtgcggccgtcc 161 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || |||||||| || || ||||| || |||||||||||||| |||||||||||||||||| Sbjct: 160 tccagctgcttgccggcgaagatcagacgctgctggtccggagggatgccctccttgtcc 101 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 || ||||| ||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 100 tgaatcttggccttcacattctcgatggtgtccgaagactccacctcgagggtgatggtc 41 Query: 365 ttgccagtgagggtcttaacgaagatctgcat 396 || || ||||||||||| |||||||| ||||| Sbjct: 40 ttacccgtgagggtcttcacgaagatttgcat 9 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 204 tggactccttctggatgttgtagtc 180
>gb|U29162.1|ZMU29162 Zea mays clone MubG9 ubiquitin gene, complete cds Length = 2913 Score = 240 bits (121), Expect = 3e-60 Identities = 233/270 (86%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||||||||||||| |||||||||||| |||||||| || || || | |||||| Sbjct: 1664 agcaccaagtggagggtgctctccttctggatgttgtagtcagcaagggtcctcccatcc 1605 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || | |||||| || ||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 1604 tccaactgcttgccggcaaagatgagacgttgctggtcaggtgggatgccctccttgtcc 1545 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 |||||||||||||| |||||||| |||||||| || ||||| ||||| |||||||| ||| Sbjct: 1544 tggatctttgccttgacattgtcaatggtgtctgaggactccacctcaagggtgattgtc 1485 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgc 424 |||||||| | |||||| || ||||||||||| || ||||| ||||| ||||||| ||| Sbjct: 1484 ttgccagtcaaggtcttgacaaagatctgcatgcctcccctaaggcgcagcaccaagtgg 1425 Query: 425 aganttggactccttctggatgttgtagtc 454 || || ||||||||||||||||||||||| Sbjct: 1424 agggtt-gactccttctggatgttgtagtc 1396 Score = 236 bits (119), Expect = 5e-59 Identities = 193/218 (88%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||||||||||||| |||||||||||||| |||||||| || || ||||| Sbjct: 1442 aggcgcagcaccaagtggagggttgactccttctggatgttgtagtcagcaagtgtgcgt 1383 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 || |||||||||||||| || || ||||| || ||||||||||| || |||||||||||| Sbjct: 1382 ccgtcctcaagctgcttgccggcgaagataagccgctgctggtcaggagggatgccctcc 1323 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||| |||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 1322 ttgtcctggatcttagccttgacattgtcaatggtgtcagaagactccacctcgagggtg 1263 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 || |||||||| ||||||||||| || ||||||||||| Sbjct: 1262 atagtcttgccggtgagggtcttcacaaagatctgcat 1225 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||||||||| ||||||||| || ||||| ||||| || ||||| Sbjct: 1899 gaggcgcagcaccaggtggagggtgctctccttctgaatgttgtaatccgcaagggtgcg 1840 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||||| |||||||| || |||||||| || |||||||||||||| ||||||||||| Sbjct: 1839 tccatcctccagctgcttgccggcaaagataagacgctgctggtccggcgggatgccctc 1780 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| |||||||| ||||| || || ||||| ||||| || || Sbjct: 1779 cttgtcctggatcttggccttgacattgtcaatggtatctgaagactccacctcaagagt 1720 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||||||||||||||| ||||| || || |||||||||||||||||||| || || ||||| Sbjct: 1719 gatggtcttgccagtaagggttttcacaaagatctgcataccacccctaagacgcagcac 1660 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||| || || ||||||||||||||||||||| Sbjct: 1659 caagtggag-ggtgctctccttctggatgttgtagtc 1624 Score = 214 bits (108), Expect = 2e-52 Identities = 208/242 (85%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||||||||| |||||||||||| |||||||| || || ||||| ||| Sbjct: 2351 cggagcaccaggtggagggtgctctccttctggatattgtagtctgcaagggtgcgacca 2292 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 ||||| |||||||| || || ||||| || ||||||||||| || || || ||||||||| Sbjct: 2291 tcctccagctgcttgccggcgaagatcagacgctgctggtctgggggaatcccctccttg 2232 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 2231 tcctggatcttagccttcacgttgtcgatggtgtcagagctctcaacctccagggttatg 2172 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||||||||| | |||||| || ||||||||||| || ||||| ||||| ||||||| | Sbjct: 2171 gtcttgccagtcaaggtcttcacaaagatctgcatgcctcccctaaggcgcagcaccaag 2112 Query: 422 tg 423 || Sbjct: 2111 tg 2110 Score = 204 bits (103), Expect = 2e-49 Identities = 209/245 (85%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||||||||||||| ||||||||| || ||||| || || || ||||| Sbjct: 2126 aggcgcagcaccaagtggagggtgctctccttctgtatgttgtaatcagcaagtgtgcgt 2067 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 || |||||||||||||| || || ||||| || ||||||||||| || ||||||||||| Sbjct: 2066 ccgtcctcaagctgcttgccggcgaagataagccgctgctggtcaggagggatgccctct 2007 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || |||||||| || ||||||||||| |||| Sbjct: 2006 ttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacctccaaggtg 1947 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| | ||||| |||||||||||||| || ||||||||||| |||||| Sbjct: 1946 atggtcttgccagtcaatgtcttcacgaagatctgcattcctcccctgaggcgcagcacc 1887 Query: 419 angtg 423 | ||| Sbjct: 1886 aggtg 1882
>gb|U74318.1|SCU74318 Schizophyllum commune polyubiquitin mRNA, complete cds Length = 1079 Score = 240 bits (121), Expect = 3e-60 Identities = 198/224 (88%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 |||||||| |||||||| | |||||| || |||||||||||||| |||||||||| || Sbjct: 264 ccacggagacggagcacgaggtggagagtagactccttctggatgttgtagtccgaaagg 205 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 |||||||||||||| |||||||| || || ||||| |||||||||||||| || || ||| Sbjct: 204 gtgcggccatcctcgagctgcttgccggcgaagatcaggcgctgctggtcgggaggaatg 145 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||| Sbjct: 144 ccctccttgtcctggatcttggccttgacattgtcgatggtgtccgaggactcaacctcg 85 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 || ||||||||||||||||| |||||||| || ||||||||||| Sbjct: 84 agagtgatggtcttgccagtaagggtcttgacaaagatctgcat 41 Score = 212 bits (107), Expect = 7e-52 Identities = 184/210 (87%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 |||||| ||||||||||||||||| ||||| |||| ||||||||||||||||| ||||| Sbjct: 700 gtggagagtcgactccttctggatgttgtaatccgagagagtgcggccatcctcgagctg 641 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| ||||| ||||| || |||||||| || || |||||||||||||||||||||||||| Sbjct: 640 cttgccagcgaagataagacgctgctgatcgggagggatgccctccttgtcctggatctt 581 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 |||||||| |||||||| ||||| || ||||| ||||| ||||| |||||||| || || Sbjct: 580 ggccttcacgttgtcgattgtgtccgacgactcgacctcgagggtaatggtcttcccggt 521 Query: 373 gagggtcttaacgaagatctgcataccacc 402 | |||||| |||||||||||||||||||| Sbjct: 520 caaggtcttgacgaagatctgcataccacc 491 Score = 210 bits (106), Expect = 3e-51 Identities = 218/255 (85%), Gaps = 1/255 (0%) Strand = Plus / Minus Query: 200 gtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttacca 259 |||||||||||||| || |||||||| | || ||||| || |||||||| ||||| || Sbjct: 465 gtcgactccttctgaatattgtagtcggacaacgtgcgcccgtcctcaagttgcttcccg 406 Query: 260 gcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttc 319 |||||||| || ||||||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 405 gcaaagataagacgctgctggtcgggcggaatgccctccttgtcctggatcttcgccttg 346 Query: 320 acattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtc 379 || |||||||||||||| || ||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 345 acgttgtcgatggtgtccgacgactcgacctcaagggtgatagtcttgcccgtgagggtc 286 Query: 380 ttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactcctt 439 || |||||||||||||| || || | ||| |||||||| | ||| ||| | |||||||| Sbjct: 285 ttgacgaagatctgcatgccgccacggagacggagcacgaggtggagag-tagactcctt 227 Query: 440 ctggatgttgtagtc 454 ||||||||||||||| Sbjct: 226 ctggatgttgtagtc 212 Score = 186 bits (94), Expect = 4e-44 Identities = 198/233 (84%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||| || || || | ||||||||||||||||||||| || |||||||| | | Sbjct: 951 ccaccacggagacgaaggacaaggtggagggtcgactccttctgaatgttgtagtcagac 892 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || ||||| || ||||| |||||||| || || ||||||||||||||||| ||||| || Sbjct: 891 agggtgcgaccgtcctccagctgcttgccggcgaagatgaggcgctgctgatccggggga 832 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||| ||||| ||||| || |||||||| |||||||| || || ||| Sbjct: 831 atgccctccttgtcctgaatcttcgccttgacgttgtcgatcgtgtcagaggattcgacc 772 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacc 402 || || ||||| |||||||| || | ||||| |||||||||||||||||||| Sbjct: 771 tcgagcgtgatcgtcttgcccgtcaacgtcttgacgaagatctgcataccacc 719
>gb|BC062397.1| Rattus norvegicus cDNA clone IMAGE:5623273, **** WARNING: chimeric clone **** Length = 3040 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2776 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 2717 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2716 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 2657 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 2656 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 2597 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 2596 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 2537 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 2536 caggtgcag-ggtggactccttctggatgttgtagtc 2501 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2548 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 2489 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2488 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 2429 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 2428 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 2369 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 2368 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 2309 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 2308 caggtgcag-ggtggactccttctggatgttgtagtc 2273 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2320 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtcagacagggtgcg 2261 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2260 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 2201 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 2200 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 2141 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 2140 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 2081 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 2080 caggtgca-aggtggactccttctggatgttgtagtc 2045 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1864 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtcagacagggtgcg 1805 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1804 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1745 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1744 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1685 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1684 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1625 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1624 caggtgcag-ggtggactccttctggatgttgtagtc 1589 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 496 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 437 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 436 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 377 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 376 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 317 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 316 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 257 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 256 caggtgca-aggtggactccttctggatgttgtagtc 221 Score = 232 bits (117), Expect = 8e-58 Identities = 235/274 (85%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1636 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1577 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1576 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1517 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1516 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1457 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1456 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1397 Query: 418 cangtgcaganttggactccttctggatgttgta 451 || |||||| |||||||||||||||||||||| Sbjct: 1396 caggtgcag-ggtggactccttctggatgttgta 1364 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2092 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 2033 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2032 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1973 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1972 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1913 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1912 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 1853 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1852 caggtgcag-ggtggactccttctggatgttgtagtc 1817 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| ||||| || | ||| ||||| Sbjct: 1408 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtaatctgacagggtgcg 1349 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1348 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1289 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1288 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1229 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1228 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1169 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 1168 caggtgca-aggtggactccttctggatgttgtagtc 1133 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1180 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 1121 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1120 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1061 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1060 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1001 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1000 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 941 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 940 caggtgca-aggtggactccttctggatgttgtagtc 905 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| ||||| || | ||| ||||| Sbjct: 724 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtaatctgacagggtgcg 665 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 664 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 605 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 604 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 545 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 544 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 485 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 484 caggtgcag-ggtggactccttctggatgttgtagtc 449 Score = 224 bits (113), Expect = 2e-55 Identities = 234/274 (85%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 952 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 893 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 892 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 833 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 832 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 773 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 772 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 713 Query: 418 cangtgcaganttggactccttctggatgttgta 451 || |||||| |||||||||||||||||||||| Sbjct: 712 caggtgcag-ggtggactccttctggatgttgta 680 Score = 174 bits (88), Expect = 2e-40 Identities = 186/219 (84%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 268 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 209 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 208 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 149 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 148 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 89 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||| ||||| | ||| || || ||||||||||| Sbjct: 88 gatggtcttaccagttaaggttttcacaaagatctgcat 50 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| |||||||||||||| || |||||||| || ||||||||||| || || |||||| Sbjct: 2832 tccagagtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgagg 2773 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||||||||||||||||||||| Sbjct: 2772 cgcaggaccaggtgcag-ggtggactccttctggatgttgtagtc 2729
>gb|AF056623.1|AF056623 Magnaporthe grisea strain Guy-11 ubiquitin fusion protein (UEP1) mRNA, complete cds Length = 620 Score = 238 bits (120), Expect = 1e-59 Identities = 200/227 (88%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct: 236 ccaccacgcaggcggaggaccaagtggagggtcgactccttctggatgttgtagtcggag 177 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||| ||||| ||||| |||||||| ||||||||||| || ||||| |||||||| || Sbjct: 176 agagtacggccgtcctccagctgcttgccagcaaagataagacgctgttggtccggggga 117 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||| ||||| | ||||||||||||||| ||||| || ||||| ||| Sbjct: 116 attccctccttgtcctgaatcttggacttcacattgtcgatcgtgtccgaggactcgacc 57 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||| |||||||||||||||||| || ||||| |||||||||||||| Sbjct: 56 tccaaggtgatggtcttgccagtcagagtcttcacgaagatctgcat 10 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 gactccttctggatgttgtagtc 454 ||||||||||||||||||||||| Sbjct: 203 gactccttctggatgttgtagtc 181
>ref|NM_017314.1| Rattus norvegicus ubiquitin C (Ubc), mRNA Length = 2545 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2304 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 2245 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2244 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 2185 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 2184 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 2125 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 2124 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 2065 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 2064 caggtgcag-ggtggactccttctggatgttgtagtc 2029 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2076 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 2017 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2016 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1957 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1956 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1897 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1896 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 1837 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1836 caggtgcag-ggtggactccttctggatgttgtagtc 1801 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1848 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1789 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1788 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1729 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1728 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1669 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1668 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1609 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1608 caggtgcag-ggtggactccttctggatgttgtagtc 1573 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1620 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1561 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1560 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1501 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1500 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1441 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1440 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1381 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1380 caggtgcag-ggtggactccttctggatgttgtagtc 1345 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1392 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1333 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1332 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1273 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1272 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1213 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1212 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1153 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1152 caggtgcag-ggtggactccttctggatgttgtagtc 1117 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1164 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1105 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1104 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1045 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1044 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 985 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 984 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 925 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 924 caggtgcag-ggtggactccttctggatgttgtagtc 889 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 936 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 877 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 876 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 817 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 816 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 757 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 756 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 697 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 696 caggtgcag-ggtggactccttctggatgttgtagtc 661 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 708 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 649 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 648 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 589 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 588 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 529 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 528 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 469 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 468 caggtgca-aggtggactccttctggatgttgtagtc 433 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 480 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 421 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 420 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 361 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 360 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 301 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 300 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 241 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 240 caggtgcag-ggtggactccttctggatgttgtagtc 205 Score = 182 bits (92), Expect = 7e-43 Identities = 187/219 (85%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 252 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 193 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 192 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 133 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 132 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 73 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||| ||||| | ||| || || ||||||||||| Sbjct: 72 gatggtcttaccagttaaggttttcacaaagatctgcat 34 Score = 99.6 bits (50), Expect = 8e-18 Identities = 94/108 (87%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 347 acctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctg 406 |||||||| |||||||||||||| || |||||||| || ||||||||||| || || ||| Sbjct: 2363 acctccagagtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctg 2304 Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || |||| |||||| ||||||||||||||||||||||||| Sbjct: 2303 aggcgcaggaccaggtgcag-ggtggactccttctggatgttgtagtc 2257
>ref|XM_579409.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_017314 (LOC497684), mRNA Length = 2545 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2304 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 2245 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2244 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 2185 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 2184 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 2125 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 2124 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 2065 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 2064 caggtgcag-ggtggactccttctggatgttgtagtc 2029 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2076 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 2017 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2016 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1957 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1956 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1897 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1896 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 1837 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1836 caggtgcag-ggtggactccttctggatgttgtagtc 1801 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1848 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtcagacagggtgcg 1789 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1788 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1729 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1728 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1669 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1668 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1609 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 1608 caggtgca-aggtggactccttctggatgttgtagtc 1573 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1392 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtcagacagggtgcg 1333 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1332 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1273 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1272 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1213 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1212 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1153 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1152 caggtgcag-ggtggactccttctggatgttgtagtc 1117 Score = 232 bits (117), Expect = 8e-58 Identities = 235/274 (85%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1164 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1105 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1104 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1045 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1044 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 985 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 984 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 925 Query: 418 cangtgcaganttggactccttctggatgttgta 451 || |||||| |||||||||||||||||||||| Sbjct: 924 caggtgcag-ggtggactccttctggatgttgta 892 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1620 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 1561 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1560 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1501 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1500 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1441 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1440 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 1381 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1380 caggtgcag-ggtggactccttctggatgttgtagtc 1345 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| ||||| || | ||| ||||| Sbjct: 936 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtaatctgacagggtgcg 877 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 876 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 817 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 816 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 757 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 756 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 697 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 696 caggtgca-aggtggactccttctggatgttgtagtc 661 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 708 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 649 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 648 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 589 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 588 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 529 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 528 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 469 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 468 caggtgca-aggtggactccttctggatgttgtagtc 433 Score = 224 bits (113), Expect = 2e-55 Identities = 234/274 (85%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 480 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 421 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 420 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 361 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 360 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 301 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 300 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 241 Query: 418 cangtgcaganttggactccttctggatgttgta 451 || |||||| |||||||||||||||||||||| Sbjct: 240 caggtgcag-ggtggactccttctggatgttgta 208 Score = 174 bits (88), Expect = 2e-40 Identities = 186/219 (84%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| ||||| || | ||| ||||| Sbjct: 252 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtaatctgacagggtgcg 193 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 192 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 133 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 132 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 73 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||| ||||| | ||| || || ||||||||||| Sbjct: 72 gatggtcttaccagttaaggttttcacaaagatctgcat 34 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| |||||||||||||| || |||||||| || ||||||||||| || || |||||| Sbjct: 2360 tccagagtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgagg 2301 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||||||||||||||||||||| Sbjct: 2300 cgcaggaccaggtgcag-ggtggactccttctggatgttgtagtc 2257
>gb|BC089218.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone IMAGE:7312282), partial cds Length = 2083 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1810 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1751 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1750 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1691 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1690 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1631 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1630 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1571 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1570 caggtgcag-ggtggactccttctggatgttgtagtc 1535 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1582 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1523 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1522 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1463 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1462 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1403 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1402 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 1343 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1342 caggtgcag-ggtggactccttctggatgttgtagtc 1307 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1354 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtcagacagggtgcg 1295 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1294 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1235 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1234 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1175 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1174 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1115 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 1114 caggtgca-aggtggactccttctggatgttgtagtc 1079 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 898 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtcagacagggtgcg 839 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 838 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 779 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 778 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 719 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 718 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 659 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 658 caggtgcag-ggtggactccttctggatgttgtagtc 623 Score = 232 bits (117), Expect = 8e-58 Identities = 235/274 (85%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 670 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 611 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 610 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 551 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 550 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 491 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 490 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 431 Query: 418 cangtgcaganttggactccttctggatgttgta 451 || |||||| |||||||||||||||||||||| Sbjct: 430 caggtgcag-ggtggactccttctggatgttgta 398 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1126 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 1067 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1066 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1007 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1006 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 947 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 946 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 887 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 886 caggtgcag-ggtggactccttctggatgttgtagtc 851 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| ||||| || | ||| ||||| Sbjct: 442 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtaatctgacagggtgcg 383 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 382 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 323 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 322 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 263 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 262 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 203 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 202 caggtgca-aggtggactccttctggatgttgtagtc 167 Score = 180 bits (91), Expect = 3e-42 Identities = 183/214 (85%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 214 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 155 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 154 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 95 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 94 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 35 Query: 358 gatggtcttgccagtgagggtcttaacgaagatc 391 |||||||||||| || |||||||| || |||||| Sbjct: 34 gatggtcttgcctgtcagggtcttcacaaagatc 1 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| |||||||||||||| || |||||||| || ||||||||||| || || |||||| Sbjct: 1866 tccagagtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgagg 1807 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||||||||||||||||||||| Sbjct: 1806 cgcaggaccaggtgcag-ggtggactccttctggatgttgtagtc 1763
>dbj|D17296.1|RATPILP Rattus norvegicus mRNA for polyubiquitin, complete cds, ten completely repetitive ubiquitins in tandem and one ubiguitin-like protein Length = 2545 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2304 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 2245 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2244 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 2185 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 2184 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 2125 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 2124 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 2065 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 2064 caggtgcag-ggtggactccttctggatgttgtagtc 2029 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 2076 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 2017 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2016 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1957 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1956 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1897 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1896 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 1837 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1836 caggtgcag-ggtggactccttctggatgttgtagtc 1801 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1848 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1789 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1788 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1729 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1728 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1669 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1668 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1609 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1608 caggtgcag-ggtggactccttctggatgttgtagtc 1573 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1620 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1561 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1560 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1501 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1500 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1441 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1440 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1381 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1380 caggtgcag-ggtggactccttctggatgttgtagtc 1345 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1392 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1333 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1332 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1273 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1272 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1213 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1212 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 1153 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 1152 caggtgcag-ggtggactccttctggatgttgtagtc 1117 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1164 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1105 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1104 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1045 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1044 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 985 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 984 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 925 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 924 caggtgcag-ggtggactccttctggatgttgtagtc 889 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 936 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 877 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 876 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 817 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 816 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 757 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 756 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 697 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 696 caggtgcag-ggtggactccttctggatgttgtagtc 661 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 708 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 649 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 648 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 589 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 588 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 529 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 528 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 469 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 468 caggtgca-aggtggactccttctggatgttgtagtc 433 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 480 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 421 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 420 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 361 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 360 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 301 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 300 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgcaggac 241 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 240 caggtgcag-ggtggactccttctggatgttgtagtc 205 Score = 182 bits (92), Expect = 7e-43 Identities = 187/219 (85%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 252 gaggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 193 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 192 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 133 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 132 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 73 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||| ||||| | ||| || || ||||||||||| Sbjct: 72 gatggtcttaccagttaaggttttcacaaagatctgcat 34 Score = 99.6 bits (50), Expect = 8e-18 Identities = 94/108 (87%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 347 acctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctg 406 |||||||| |||||||||||||| || |||||||| || ||||||||||| || || ||| Sbjct: 2363 acctccagagtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctg 2304 Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || |||| |||||| ||||||||||||||||||||||||| Sbjct: 2303 aggcgcaggaccaggtgcag-ggtggactccttctggatgttgtagtc 2257
>gb|BC103477.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone MGC:124622 IMAGE:7929586), complete cds Length = 1501 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1189 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 1130 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1129 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1070 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1069 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 1010 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 1009 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 950 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 949 caggtgcag-ggtggactccttctggatgttgtagtc 914 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 961 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 902 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 901 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 842 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 841 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 782 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 781 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 722 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 721 caggtgcag-ggtggactccttctggatgttgtagtc 686 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 733 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 674 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 673 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 614 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 613 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 554 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 553 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 494 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 493 caggtgcag-ggtggactccttctggatgttgtagtc 458 Score = 238 bits (120), Expect = 1e-59 Identities = 238/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 505 gaggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctgacagggtgcg 446 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 445 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 386 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 385 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 326 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| || || |||||||| || || Sbjct: 325 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgaggcgaaggac 266 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||| | ||||||||||||||||||||||||| Sbjct: 265 caggtgca-aggtggactccttctggatgttgtagtc 230 Score = 174 bits (88), Expect = 2e-40 Identities = 186/219 (84%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 277 gaggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcg 218 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 217 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 158 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 157 cttgtcctggatctttgccttgacattttcaatggtgtcactgggctcgacctccagggt 98 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||| ||||| | ||| || || ||||||||||| Sbjct: 97 gatggtcttaccagttaaggttttcacaaagatctgcat 59 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 ||||| |||||||||||||| || |||||||| || ||||||||||| || || |||||| Sbjct: 1245 tccagagtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccccctctgagg 1186 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||||||||||||||||||||| Sbjct: 1185 cgaaggaccaggtgcag-ggtggactccttctggatgttgtagtc 1142
>ref|NM_183832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 234 bits (118), Expect = 2e-58 Identities = 195/221 (88%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||||| |||||||||||||||||||||||| |||||||| || || ||| Sbjct: 221 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtg 162 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 || || ||||| |||||||| || || |||||||| ||||||||||| || ||||| ||| Sbjct: 161 cgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtcgggcgggatcccc 102 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 101 tccttgtcctggatcttcgccttcacgttgtcgatggtgtccgaggactccacctccagc 42 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 41 gtgatcgtcttccccgtcagggtcttcacgaagatctgcat 1 Score = 46.1 bits (23), Expect = 0.099 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| || | ||||||||||||||||||||||| Sbjct: 219 gaggcggagcaccaggtggag-ggtcgactccttctggatgttgtagtc 172
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 234 bits (118), Expect = 2e-58 Identities = 195/221 (88%) Strand = Plus / Plus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||||| |||||||||||||||||||||||| |||||||| || || ||| Sbjct: 12628958 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtg 12629017 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 || || ||||| |||||||| || || |||||||| ||||||||||| || ||||| ||| Sbjct: 12629018 cgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtcgggcgggatcccc 12629077 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 12629078 tccttgtcctggatcttcgccttcacgttgtcgatggtgtccgaggactccacctccagc 12629137 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 12629138 gtgatcgtcttccccgtcagggtcttcacgaagatctgcat 12629178 Score = 168 bits (85), Expect = 1e-38 Identities = 197/232 (84%), Gaps = 2/232 (0%) Strand = Plus / Minus Query: 166 caggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtc 225 |||||| || |||||||||||||||| ||| || ||||||||||||||||| |||||||| Sbjct: 25761108 caggccgccgcggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 25761049 Query: 226 cgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 285 ||||| ||||| || ||||| |||||||| || || |||||||| |||||||||||||| Sbjct: 25761048 ggccagcgtgcgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtccgg 25760989 Query: 286 tgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatg-act 344 ||||| |||||||||||||| | ||| ||||| || || | ||| ||||| | || || Sbjct: 25760988 cgggatcccctccttgtcctgcaccttcgccttgacgttctggatcgtgtc-gctgctct 25760930 Query: 345 caacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 | |||||||| ||||||||||| || || |||||||| |||||||||||||| Sbjct: 25760929 ccacctccagcgtgatggtcttccccgtcagggtcttcacgaagatctgcat 25760878 Score = 127 bits (64), Expect = 3e-26 Identities = 117/135 (86%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||| | ||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct: 25765520 cggaggcggagcacgaggtgcagcgtcgactccttctggatgttgtagtcggccagcgtg 25765461 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||| ||||| |||||||| || || |||||||| |||||||||| ||| |||| |||| Sbjct: 25765460 cggccgtcctccagctgcttgccggcgaagatgagccgctgctggtgcggcgggacgccc 25765401 Query: 296 tccttgtcctggatc 310 ||| |||| |||||| Sbjct: 25765400 tccctgtcgtggatc 25765386 Score = 54.0 bits (27), Expect = 4e-04 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| |||||| | | |||||||||||||||||||||| Sbjct: 25761096 gaggcggagcaccaggtgcagcgtcg-actccttctggatgttgtagtc 25761049 Score = 46.1 bits (23), Expect = 0.099 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||| | |||||| | ||||||||||||||||||||||| Sbjct: 25765518 gaggcggagcacgaggtgcag-cgtcgactccttctggatgttgtagtc 25765471 Score = 46.1 bits (23), Expect = 0.099 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| || | ||||||||||||||||||||||| Sbjct: 12628960 gaggcggagcaccaggtggag-ggtcgactccttctggatgttgtagtc 12629007
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 234 bits (118), Expect = 2e-58 Identities = 195/221 (88%) Strand = Plus / Plus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||||| |||||||||||||||||||||||| |||||||| || || ||| Sbjct: 140568 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtg 140627 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 || || ||||| |||||||| || || |||||||| ||||||||||| || ||||| ||| Sbjct: 140628 cgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtcgggcgggatcccc 140687 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 140688 tccttgtcctggatcttcgccttcacgttgtcgatggtgtccgaggactccacctccagc 140747 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 140748 gtgatcgtcttccccgtcagggtcttcacgaagatctgcat 140788 Score = 46.1 bits (23), Expect = 0.099 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| || | ||||||||||||||||||||||| Sbjct: 140570 gaggcggagcaccaggtggag-ggtcgactccttctggatgttgtagtc 140617
>dbj|AB089620.1| Gorilla gorilla UbB gene for polyubiquitin B, complete cds Length = 690 Score = 234 bits (118), Expect = 2e-58 Identities = 230/267 (86%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 ||||| |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 257 ccagtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 199 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 198 ggtcgactccttctggatgttgtagtc 172 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 674 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 615 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 614 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttct 555 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 554 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 495 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 494 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 435 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 434 aggtgcag-ggtcgactccttctggatgttgtagtc 400 Score = 186 bits (94), Expect = 4e-44 Identities = 180/209 (86%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 150 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 29 ccggtaagggttttcacgaagatctgcat 1
>dbj|AK061988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B08, full insert sequence Length = 794 Score = 234 bits (118), Expect = 2e-58 Identities = 195/221 (88%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||||| |||||||||||||||||||||||| |||||||| || || ||| Sbjct: 323 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtg 264 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 || || ||||| |||||||| || || |||||||| ||||||||||| || ||||| ||| Sbjct: 263 cgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtcgggcgggatcccc 204 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 203 tccttgtcctggatcttcgccttcacgttgtcgatggtgtccgaggactccacctccagc 144 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 143 gtgatcgtcttccccgtcagggtcttcacgaagatctgcat 103 Score = 46.1 bits (23), Expect = 0.099 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| || | ||||||||||||||||||||||| Sbjct: 321 gaggcggagcaccaggtggag-ggtcgactccttctggatgttgtagtc 274
>dbj|AK059242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F10, full insert sequence Length = 1517 Score = 234 bits (118), Expect = 2e-58 Identities = 195/221 (88%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||||| |||||||||||||||||||||||| |||||||| || || ||| Sbjct: 323 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtg 264 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 || || ||||| |||||||| || || |||||||| ||||||||||| || ||||| ||| Sbjct: 263 cgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtcgggcgggatcccc 204 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 203 tccttgtcctggatcttcgccttcacgttgtcgatggtgtccgaggactccacctccagc 144 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 143 gtgatcgtcttccccgtcagggtcttcacgaagatctgcat 103 Score = 46.1 bits (23), Expect = 0.099 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| || | ||||||||||||||||||||||| Sbjct: 321 gaggcggagcaccaggtggag-ggtcgactccttctggatgttgtagtc 274
>gb|AF502575.1| Musa acuminata ubiquitin (UBQ1) gene, complete cds Length = 1146 Score = 234 bits (118), Expect = 2e-58 Identities = 242/283 (85%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||||||||| |||||||||||||| ||||| || || Sbjct: 684 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtaatcagc 625 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || |||||||| ||||| |||||||| || ||||||||||| | ||||||||||||||| Sbjct: 624 caaggtgcggccgtcctccagctgcttgccggcaaagatgagcctctgctggtccggtgg 565 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||||| ||||| ||||| ||||| |||||||||||||||||||| ||| || Sbjct: 564 aatgccctccttatcctgaatcttggccttgacattgtcgatggtgtcagaactctccac 505 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||||||||||||||| | |||||| || ||||| ||||| ||||||| || Sbjct: 504 ctcgagggtgatggtcttgccagtcaaggtcttgacaaagatttgcatgccaccccgaag 445 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgta 451 || ||||| | ||| || |||||||||||||||||||||| Sbjct: 444 tcgaagcacaaggtggag-ggtggactccttctggatgttgta 403 Score = 224 bits (113), Expect = 2e-55 Identities = 199/228 (87%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 ||||||||| ||||| || || | ||||||||| |||||||||||||| ||||| ||||| Sbjct: 228 gccaccacgaaggcgaagtacgaggtggagggtggactccttctggatgttgtaatccgc 169 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || |||||||||||||| |||||||| |||||||| || | |||||||| || || Sbjct: 168 aagggtccggccatcctcaagttgcttaccggcaaagatcagcctttgctggtctggagg 109 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||| ||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||| Sbjct: 108 gattccctctttgtcctggatcttagccttgacattgtcgatggtgtcagaggattcaac 49 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| ||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 48 ctcaagggtgatggtcttgccagtgagagttttaacaaagatctgcat 1 Score = 202 bits (102), Expect = 7e-49 Identities = 220/259 (84%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| |||||||||||||| ||||| || ||||| |||||||||||||||||||| Sbjct: 432 gtggagggtggactccttctggatgttgtaatcagccagggtgcggccatcctcaagctg 373 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| || ||||||||||| | |||||||| || || ||||||||||| ||||| ||||| Sbjct: 372 cttgccggcaaagatgagcctttgctggtctggaggaatgccctccttatcctgaatctt 313 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 ||||| |||||||||||||||||||| ||| ||||| |||||||||||||||||||| Sbjct: 312 agccttgacattgtcgatggtgtcagaactctccacctcgagggtgatggtcttgccagt 253 Query: 373 gagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttgg 432 | |||||| || ||||| ||||| ||||| | ||||| || || | ||| || ||| Sbjct: 252 caaggtcttgacaaagatttgcatgccaccacgaaggcgaagtacgaggtggag-ggtgg 194 Query: 433 actccttctggatgttgta 451 ||||||||||||||||||| Sbjct: 193 actccttctggatgttgta 175 Score = 186 bits (94), Expect = 4e-44 Identities = 215/255 (84%), Gaps = 1/255 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| ||||||||||| || ||||| || ||||| ||||||||||||||||||||||| Sbjct: 884 agggtagactccttctgaatgttgtaatctgccagggtgcggccatcctcaagctgcttg 825 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 || ||||||||||| | ||||||||||| || || |||||||||||||| ||||| ||| Sbjct: 824 ccggcaaagatgagcctttgctggtccgggggaataccctccttgtcctgaatcttggcc 765 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 || ||||||||||||||||| || ||| |||| |||||||||||||| ||||| | Sbjct: 764 tttacattgtcgatggtgtccgagctctccaccttaagggtgatggtcttcccagtcaaa 705 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| |||||||| ||||| ||||| | ||||||||| || | ||| || ||||||| Sbjct: 704 gtcttgacgaagatttgcatgccaccacggaggcggaggacaaggtggag-ggtggactc 646 Query: 437 cttctggatgttgta 451 ||||||||||||||| Sbjct: 645 cttctggatgttgta 631 Score = 172 bits (87), Expect = 6e-40 Identities = 194/230 (84%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||||||||||| ||| ||||| || |||||||| || ||||| || ||||| ||| Sbjct: 1133 cggaggcggagcaccaggtgaagggtggattccttctgaatgttgtaatctgccagggtg 1074 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 || || ||||| |||||||| ||||||||||| || | |||||| |||||||| || ||| Sbjct: 1073 cgcccgtcctccagctgcttcccagcaaagatcagcctctgctgatccggtggaatcccc 1014 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||||||||| ||||| || || ||||| || ||| ||||||| | Sbjct: 1013 tccttgtcctggatctttgccttgacattatcaatcgtgtccgagctctccacctccaag 954 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccct 405 || |||||||| || || || |||||||| ||||||||||| |||||||| Sbjct: 953 gtaatggtcttccctgtaagcgtcttaacaaagatctgcatgccacccct 904
>emb|AJ575140.1|SMA575140 Sordaria macrospora partial smu5995 gene for polyubiquitin homolog Length = 626 Score = 234 bits (118), Expect = 2e-58 Identities = 204/233 (87%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||| |||||||||||||| ||||| ||||||||| || |||||||| | Sbjct: 419 ccaccacggagacggagcaccaagtgcagggtgctctccttctgaatgttgtagtcggag 360 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||| ||||||||||| |||||||| |||||||||||||| |||||||| || |||||| Sbjct: 359 agagtacggccatcctcgagctgctttccagcaaagatgagacgctgctgatcaggtggg 300 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 299 ataccctccttgtcctgaatcttttgcttcacattgtcgatggtgtcagaagactcaacc 240 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacc 402 || || || || |||||||| || || ||||| |||||||||||||||||||| Sbjct: 239 tcgagagtaatcgtcttgccggtaagcgtcttgacgaagatctgcataccacc 187 Score = 168 bits (85), Expect = 1e-38 Identities = 209/250 (83%), Gaps = 1/250 (0%) Strand = Plus / Minus Query: 205 ctccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 264 |||||||||||| ||||| |||| ||| || ||||||||||| | |||||| |||||||| Sbjct: 612 ctccttctggatgttgtaatccgacagggtccggccatcctccaactgcttgccagcaaa 553 Query: 265 gatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcacatt 324 ||| |||||||||||||| || |||||||||||||| ||||| |||||| |||||| || Sbjct: 552 gatcaggcgctgctggtcgggcgggatgccctccttatcctgaatcttttgcttcacgtt 493 Query: 325 gtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtcttaac 384 ||| || || || || ||||| || ||||| || || |||||||| || | |||||| || Sbjct: 492 gtcaatcgtatccgaggactcgacttccagcgtaatcgtcttgcccgtcaaggtcttgac 433 Query: 385 gaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctgga 444 ||| |||||||||||||| | ||| |||||||||| |||||| || ||||||||| | Sbjct: 432 gaaaatctgcataccaccacggagacggagcaccaagtgcag-ggtgctctccttctgaa 374 Query: 445 tgttgtagtc 454 |||||||||| Sbjct: 373 tgttgtagtc 364 Score = 105 bits (53), Expect = 1e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 194 tggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgc 253 |||||||| ||||||||||| || |||||||| || |||||| || || ||||||||| Sbjct: 167 tggagggtagactccttctgaatgttgtagtcgctcaaagtgcgaccgtcttcaagctgc 108 Query: 254 ttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatcttt 313 || || ||||||||||| |||||||| || || || || |||||||||| ||||||||| Sbjct: 107 ttgccggcaaagatgagacgctgctgatcgggaggaatatcctccttgtcttggatcttt 48 Query: 314 gccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||| ||||||||||||||||| || || || ||||| ||||| Sbjct: 47 tgcttgacattgtcgatggtgtcggacgattccacctcaagggt 4
>gb|DQ216245.1| Taeniopygia guttata clone 0065P0025D10 ubiquitin C variant 5-like mRNA, complete sequence Length = 1438 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| ||||||| ||| || || |||||||||||||| |||||||| | Sbjct: 1097 gccacccctgaggcgcagcaccaggtgcagagttgactccttctggatgttgtagtcgga 1038 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||| ||||| || |||||||| ||||| || || || | ||||||||| || || Sbjct: 1037 cagggtgcgcccatcttccagctgcttgccagcgaaaatcagcctctgctggtctggggg 978 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||||||||||||||| ||||||||||| |||||||||||| | |||||| Sbjct: 977 aatgccttccttgtcctggatcttggccttcacattctcgatggtgtcactgggctcaac 918 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 917 ttccagggtgatggtcttgccagtcagggtcttcacgaagatctgcatcccacccctgag 858 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || || | |||||| |||| |||||||||||||||||||| Sbjct: 857 gcgcaggacaaggtgcag-ggtggattccttctggatgttgtagtc 813 Score = 228 bits (115), Expect = 1e-56 Identities = 236/276 (85%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | || ||||| Sbjct: 403 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcagagagggtgcgc 344 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 |||||||| || ||||||||||||||||| || | ||||||||| || ||||| || ||| Sbjct: 343 ccatcctccagttgcttaccagcaaagatcagcctctgctggtcaggagggataccttcc 284 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | |||||| ||||||||| Sbjct: 283 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctcaacttccagggtg 224 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| || ||||||||||| ||||| || ||||| |||||| Sbjct: 223 atggtcttgccagtcagggtcttcacaaagatctgcatcccacctctcaggcgcagcacc 164 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| |||| |||||||||||||||||||| Sbjct: 163 aggtgcag-ggtggattccttctggatgttgtagtc 129 Score = 200 bits (101), Expect = 3e-48 Identities = 219/258 (84%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| || ||||||||||| |||||||| | || ||| || |||||||| ||||||||| Sbjct: 841 agggtggattccttctggatgttgtagtcggacaaagtacgaccatcctccagctgctta 782 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| || || || | ||||||||| || || ||||| ||||||||||||||||| ||| Sbjct: 781 ccagcgaaaatcagcctctgctggtctgggggaatgccttccttgtcctggatcttggcc 722 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||| || ||||||||| | ||| ||||| || |||||||||||||| || ||| Sbjct: 721 ttcacattttcaatggtgtcactgggctccacctcgagagtgatggtcttgccggtcagg 662 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| |||||||||||||| |||||||||||||| ||||||| |||||| |||| || Sbjct: 661 gtcttgacgaagatctgcatcccacccctgaggcgcagcaccaggtgcag-ggtggattc 603 Query: 437 cttctggatgttgtagtc 454 ||||||||||||||||| Sbjct: 602 tttctggatgttgtagtc 585 Score = 182 bits (92), Expect = 7e-43 Identities = 231/277 (83%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| || || |||||||| |||||||| | ||| ||||| Sbjct: 632 gaggcgcagcaccaggtgcagggtggattctttctggatgttgtagtcagacagggtgcg 573 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| ||||| || || || | ||||||||| || || |||||||| Sbjct: 572 cccatcttccagctgcttgccagcgaaaatcagcctctgctggtctgggggaatgccctc 513 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || || |||||||||||| | ||| ||||| || || Sbjct: 512 cttgtcctggatcttggccttgacgttctcgatggtgtcactgggctccacctcaagagt 453 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||||||||||||||| ||||| || || ||||||||||| ||||| || ||||| ||||| Sbjct: 452 gatggtcttgccagtcagggttttcacaaagatctgcatcccacctctcaggcgcagcac 393 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| |||| |||||||||||||||||||| Sbjct: 392 caggtgcag-ggtggattccttctggatgttgtagtc 357 Score = 143 bits (72), Expect = 6e-31 Identities = 137/159 (86%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | ||| ||||| Sbjct: 175 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcagacagggtgcgc 116 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || ||||| || ||| Sbjct: 115 ccatcttccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttcc 56 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtca 337 |||||||||||||| ||||||||||| |||||||||||| Sbjct: 55 ttgtcctggatcttggccttcacattctcgatggtgtca 17
>gb|DQ216232.1| Taeniopygia guttata clone 0058P0060G06 ubiquitin C variant 1-like mRNA, complete sequence Length = 1306 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| ||||||| ||| || || |||||||||||||| |||||||| | Sbjct: 981 gccacccctgaggcgcagcaccaggtgcagagttgactccttctggatgttgtagtcgga 922 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||| ||||| || |||||||| ||||| || || || | ||||||||| || || Sbjct: 921 cagggtgcgcccatcttccagctgcttgccagcgaaaatcagcctctgctggtctggggg 862 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||||||||||||||| ||||||||||| |||||||||||| | |||||| Sbjct: 861 aatgccttccttgtcctggatcttggccttcacattctcgatggtgtcactgggctcaac 802 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 801 ttccagggtgatggtcttgccagtcagggtcttcacgaagatctgcatcccacccctgag 742 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || || | |||||| |||| |||||||||||||||||||| Sbjct: 741 gcgcaggacaaggtgcag-ggtggattccttctggatgttgtagtc 697 Score = 220 bits (111), Expect = 3e-54 Identities = 235/276 (85%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | ||| ||||| Sbjct: 514 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcagacagggtgcgc 455 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || ||||| || ||| Sbjct: 454 ccatcttccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttcc 395 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| |||||||||||| | ||| ||||| || ||| Sbjct: 394 ttgtcctggatcttggccttcacattctcgatggtgtcactgggctccacctcgagagtg 335 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || ||||| || |||||||||||||| ||||| || ||||| |||||| Sbjct: 334 atggtcttgccggtcagggttttcacgaagatctgcatcccacctctcaggcgcagcacc 275 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||||||| || ||||| ||||||||||||||||| Sbjct: 274 aggtgcagagtt-gactctttctggatgttgtagtc 240 Score = 194 bits (98), Expect = 2e-46 Identities = 220/259 (84%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca-agctgctt 255 ||||| || ||||||||||| |||||||| | || ||||| |||||||| || || || Sbjct: 725 agggtggattccttctggatgttgtagtcagagagggtgcgcccatcctcccagttgttt 666 Query: 256 accagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgc 315 |||||||||||| || | ||||||||| || ||||| || ||||||||||||||||| || Sbjct: 665 accagcaaagatcagcctctgctggtcaggagggataccttccttgtcctggatcttggc 606 Query: 316 cttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgag 375 ||||||||| || ||||||||| | |||||| ||||||||||||||||||||||| || Sbjct: 605 cttcacattttcaatggtgtcactgggctcaacttccagggtgatggtcttgccagtcag 546 Query: 376 ggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggact 435 |||||| || ||||||||||| ||||| || ||||| ||||||| |||||| |||| | Sbjct: 545 ggtcttcacaaagatctgcatcccacctctcaggcgcagcaccaggtgcag-ggtggatt 487 Query: 436 ccttctggatgttgtagtc 454 ||||||||||||||||||| Sbjct: 486 ccttctggatgttgtagtc 468 Score = 172 bits (87), Expect = 6e-40 Identities = 185/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| || || ||||| |||||||| |||||||| | || ||||| Sbjct: 286 aggcgcagcaccaggtgcagagttgactctttctggatgttgtagtcggagagggtgcgc 227 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || || ||||||||| Sbjct: 226 ccatcttccagctgcttgccagcaaagatcagcctctgctggtctgggggaatgccctcc 167 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| |||||| Sbjct: 166 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcaagggtg 107 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||| |||||||| || ||||||||||| Sbjct: 106 atggtcttgccagtcagggtcttcacaaagatctgcat 69
>gb|AF285162.1| Mus musculus cell-line C3H/RV polyubiquitin C (Ubc) gene, complete cds Length = 4212 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 3978 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 3919 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 3918 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 3859 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 3858 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 3799 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 3798 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 3739 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 3738 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 3694 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 3522 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 3463 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 3462 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 3403 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 3402 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 3343 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 3342 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 3283 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 3282 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 3238 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 3294 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 3235 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 3234 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 3175 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 3174 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 3115 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 3114 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 3055 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 3054 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 3010 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1926 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1867 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1866 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1807 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1806 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1747 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1746 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1687 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1686 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1642 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2373 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 2314 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2313 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 2254 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 2253 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 2194 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 2193 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgaggcgaaggac 2134 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 2133 caggtgcag-ggtggactctttctggatgttgtagtc 2098 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 3750 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 3691 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 3690 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 3631 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 3630 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 3571 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||| ||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 3570 ctccagggtgatggttttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 3511 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 3510 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 3466 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 3066 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 3007 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 3006 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 2947 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 2946 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 2887 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || ||||| || || ||||||||||| ||||| ||||| Sbjct: 2886 ctccagggtgatggtcttgcctgtcagggttttcacaaagatctgcatgccacctctgag 2827 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2826 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2782 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2838 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 2779 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || | Sbjct: 2778 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcagggga 2719 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 2718 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 2659 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 2658 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 2599 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2598 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2554 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2610 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 2551 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 2550 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 2491 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 2490 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 2431 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || ||||| || || ||||||||||| ||||| ||||| Sbjct: 2430 ctccagggtgatggtcttgcctgtcagggttttcacaaagatctgcatcccacctctgag 2371 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2370 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2326 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2145 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 2086 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||| | || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2085 gccaccttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 2026 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 2025 cttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgacctccagggt 1966 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 1965 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 1906 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 1905 caggtgcag-ggtggactctttctggatgttgtagtc 1870 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1698 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1639 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1638 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1579 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1578 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 1519 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 1518 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 1471 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 4025 tccaaggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 3966 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 3965 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 3922
>gb|AF285161.1| Mus musculus cell-line C3H/He polyubiquitin C (Ubc) gene, complete cds Length = 3756 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 3522 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 3463 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 3462 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 3403 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 3402 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctccac 3343 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 3342 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 3283 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 3282 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 3238 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 3066 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 3007 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 3006 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 2947 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 2946 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 2887 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 2886 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 2827 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2826 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2782 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2838 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 2779 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 2778 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 2719 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 2718 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctccac 2659 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 2658 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 2599 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2598 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2554 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1926 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1867 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1866 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1807 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1806 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 1747 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1746 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1687 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1686 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1642 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 3285 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 3226 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 3225 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 3166 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 3165 cttgtcctggatctttgccttgacattctcaatggtgtcactgggctccacctccagggt 3106 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 3105 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 3046 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 3045 caggtgcag-ggtggactctttctggatgttgtagtc 3010 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2610 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 2551 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 2550 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 2491 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 2490 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 2431 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || ||||| || || ||||||||||| ||||| ||||| Sbjct: 2430 ctccagggtgatggtcttgcctgtcagggttttcacaaagatctgcatgccacctctgag 2371 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2370 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2326 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2382 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 2323 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || | Sbjct: 2322 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcagggga 2263 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 2262 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 2203 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 2202 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 2143 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2142 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2098 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2154 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 2095 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 2094 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 2035 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || || |||||| | ||| || Sbjct: 2034 gatgccctccttgtcctggatctttgccttgacattctctatagtgtcactgggctcgac 1975 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1974 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1915 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1914 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1870 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1698 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1639 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1638 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1579 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1578 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 1519 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 1518 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 1471 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 3569 tccaaggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 3510 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 3509 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 3466
>ref|XM_973010.1| PREDICTED: Mus musculus ubiquitin C (Ubc), mRNA Length = 2310 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2146 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 2087 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 2086 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 2027 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 2026 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1967 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1966 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1907 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1906 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1862 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1462 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1403 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1402 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1343 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1342 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1283 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1282 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 1223 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1222 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1178 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || || ||||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1681 gaggcgaaggactaagtgcagggtggactctttctggatgttgtagtctgacagggtgcg 1622 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1621 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1562 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1561 cttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgacctccagggt 1502 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 1501 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 1442 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 1441 caggtgcag-ggtggactctttctggatgttgtagtc 1406 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1225 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 1166 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1165 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1106 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1105 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 1046 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 1045 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 986 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 985 caggtgcag-ggtggactctttctggatgttgtagtc 950 Score = 228 bits (115), Expect = 1e-56 Identities = 242/284 (85%), Gaps = 1/284 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1006 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 947 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 946 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 887 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 886 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 827 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 826 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 767 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtag 452 ||| || |||| |||||| ||||||| ||||||||||||||| Sbjct: 766 gcgaaggaccaagtgcag-ggtggactctttctggatgttgtag 724 Score = 216 bits (109), Expect = 5e-53 Identities = 242/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1918 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1859 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1858 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1799 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1798 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 1739 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||| ||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1738 ctccagggtgatggttttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 1679 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || || | |||||| ||||||| ||||||||||||||||| Sbjct: 1678 gcgaaggactaagtgcag-ggtggactctttctggatgttgtagtc 1634 Score = 184 bits (93), Expect = 2e-43 Identities = 229/274 (83%), Gaps = 1/274 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||||||| ||||| ||||| |||||||| |||||| | | ||| ||||| Sbjct: 769 gaggcgaaggaccaagtgcagggtggactctttctggatgttgtagcctgacagggtgcg 710 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 709 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 650 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||| ||||||||||| ||||| || |||| |||| | ||| ||||||||||| Sbjct: 649 cttgtcctgaatctttgccttgacattctctatggagtcactgggctcgacctccagggt 590 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| ||| ||| || || Sbjct: 589 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgcagcgaaggac 530 Query: 418 cangtgcaganttggactccttctggatgttgta 451 || |||||| |||||| |||||||||||||| Sbjct: 529 cacgtgcag-ggaggactctttctggatgttgta 497 Score = 103 bits (52), Expect = 5e-19 Identities = 160/195 (82%), Gaps = 1/195 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 ||||| |||||||| ||||| || | ||| |||||| |||| || |||||||| || ||| Sbjct: 516 gactctttctggatgttgtactctgacagggtgcggacatcttccagctgcttgcctgca 457 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 ||||| | | |||||||| | |||||||||| ||||||||||||||||||||| ||| Sbjct: 456 aagatcatcctgtgctggtcatgggggatgcccttcttgtcctggatctttgccttgaca 397 Query: 323 ttgtcgatggtgtcagatgactcaacctcc-agggtgatggtcttgccagtgagggtctt 381 || || ||||||||| | ||| |||||| |||||||||||||| ||||| | ||| || Sbjct: 396 ttctcaatggtgtcactgggctcgacctcctagggtgatggtcttaccagttaaggtttt 337 Query: 382 aacgaagatctgcat 396 || ||||||||||| Sbjct: 336 cacaaagatctgcat 322 Score = 101 bits (51), Expect = 2e-18 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 2193 tccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 2134 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2133 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2090
>ref|XM_001001949.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 8 (Ubc), mRNA Length = 1354 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1109 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1050 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1049 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 990 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 989 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 930 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 929 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 870 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 869 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 825 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 881 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 822 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 821 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 762 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 761 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 702 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 701 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 654 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 1156 tccaaggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 1097 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1096 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1053
>ref|XM_001001988.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 4 (Ubc), mRNA Length = 1250 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1005 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 946 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 945 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 886 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 885 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 826 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 825 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 766 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 765 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 721 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 777 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 718 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 717 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 658 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 657 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 598 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 597 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 538 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 537 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 493 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 549 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 490 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 489 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 430 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 429 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 370 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 369 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 322 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 1052 tccaaggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 993 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 992 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 949
>ref|XM_001002029.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 18 (Ubc), mRNA Length = 2266 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2021 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1962 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1961 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1902 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1901 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1842 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1841 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1782 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1781 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1737 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1793 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1734 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1733 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1674 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1673 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1614 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1613 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1554 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1553 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1509 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1565 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1506 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1505 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1446 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1445 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1386 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1385 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1326 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1325 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1281 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1109 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1050 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1049 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 990 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 989 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 930 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 929 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 870 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 869 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 825 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1337 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1278 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | |||||| || || || Sbjct: 1277 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctgatcaggggg 1218 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1217 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1158 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1157 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1098 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1097 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1053 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 881 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 822 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 821 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 762 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 761 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 702 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 701 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 654 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 2068 tccaaggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 2009 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2008 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1965
>ref|XM_001002019.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 25 (Ubc), mRNA Length = 1676 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1431 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1372 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1371 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1312 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1311 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1252 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1251 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1192 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1191 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1147 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1203 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1144 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1143 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1084 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1083 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1024 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1023 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 964 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 963 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 919 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 975 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 916 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 915 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 856 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 855 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 796 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 795 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 736 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 735 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 691 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 519 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 460 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 459 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 400 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 399 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 340 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 339 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 280 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 279 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 235 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 747 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 688 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | |||||| || || || Sbjct: 687 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctgatcaggggg 628 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 627 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 568 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 567 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 508 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 507 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 463 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 291 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 232 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 231 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 172 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 171 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 112 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 111 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 64 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 1478 tccaaggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 1419 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1418 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1375
>ref|XM_001002053.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 22 (Ubc), mRNA Length = 1931 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1686 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1627 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1626 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1567 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1566 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1507 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1506 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1447 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1446 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1402 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1458 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1399 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1398 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1339 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1338 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1279 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1278 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1219 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1218 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1174 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1230 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1171 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1170 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1111 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1110 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1051 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1050 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 991 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 990 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 946 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 774 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 715 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 714 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 655 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 654 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 595 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 594 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 535 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 534 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 490 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 546 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 487 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 486 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 427 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 426 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 367 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 366 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 307 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 306 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 262 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1002 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 943 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | |||||| || || || Sbjct: 942 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctgatcaggggg 883 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 882 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 823 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 822 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 763 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 762 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 718 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 318 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 259 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 258 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 199 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 198 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 139 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 138 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 91 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 1733 tccaaggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 1674 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1673 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1630
>ref|XM_001002045.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 29 (Ubc), mRNA Length = 2494 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2249 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 2190 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 2189 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 2130 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 2129 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 2070 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 2069 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 2010 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2009 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1965 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2021 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1962 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1961 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1902 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1901 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1842 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1841 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1782 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1781 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1737 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1793 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1734 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1733 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1674 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1673 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1614 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1613 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1554 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1553 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1509 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1337 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1278 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1277 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1218 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1217 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1158 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1157 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1098 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1097 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1053 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1109 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1050 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1049 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 990 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 989 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 930 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 929 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 870 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 869 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 825 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1565 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1506 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | |||||| || || || Sbjct: 1505 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctgatcaggggg 1446 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1445 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1386 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1385 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1326 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1325 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1281 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 881 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 822 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 821 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 762 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 761 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 702 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 701 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 654 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 2296 tccaaggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 2237 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2236 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2193
>gb|BC025894.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:5055216), complete cds Length = 1213 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 965 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 906 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 905 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 846 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 845 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 786 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 785 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 726 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 725 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 681 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 500 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 441 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 440 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 381 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 380 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 321 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 320 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 261 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 260 caggtgcag-ggtggactctttctggatgttgtagtc 225 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 737 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 678 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 677 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 618 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 617 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 558 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||| ||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 557 ctccagggtgatggttttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 498 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 497 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 453 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 281 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 222 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 221 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 162 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 161 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 102 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 101 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 54 Score = 101 bits (51), Expect = 2e-18 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 1012 tccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 953 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 952 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 909
>gb|BC036303.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:2645223), complete cds Length = 1193 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 717 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 658 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 657 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 598 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 597 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 538 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 537 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 478 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 477 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 433 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 489 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 430 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 429 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 370 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 369 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 310 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 309 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 250 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 249 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 205 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 945 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 886 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 885 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 826 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 825 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 766 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 |||||||||||| |||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 765 ctccagggtgatagtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 706 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 705 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 661 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 261 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 202 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 201 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 142 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 141 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 82 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 81 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 34 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 992 tccaaggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 933 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 932 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 889
>gb|BC021837.1| Mus musculus ubiquitin C, mRNA (cDNA clone MGC:30231 IMAGE:5123918), complete cds Length = 2120 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1872 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1813 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1812 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1753 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1752 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1693 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1692 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1633 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1632 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1588 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1188 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1129 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1128 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1069 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1068 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1009 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1008 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 949 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 948 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 904 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 732 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 673 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 672 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 613 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 612 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 553 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 552 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 493 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 492 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 448 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || || ||||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1407 gaggcgaaggactaagtgcagggtggactctttctggatgttgtagtctgacagggtgcg 1348 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1347 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1288 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1287 cttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgacctccagggt 1228 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 1227 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 1168 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 1167 caggtgcag-ggtggactctttctggatgttgtagtc 1132 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 951 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 892 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 891 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 832 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 831 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 772 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 771 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 712 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 711 caggtgcag-ggtggactctttctggatgttgtagtc 676 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 495 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 436 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 435 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 376 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 375 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 316 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 315 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 256 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 255 caggtgcag-ggtggactctttctggatgttgtagtc 220 Score = 216 bits (109), Expect = 5e-53 Identities = 242/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1644 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1585 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1584 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1525 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1524 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 1465 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||| ||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1464 ctccagggtgatggttttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 1405 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || || | |||||| ||||||| ||||||||||||||||| Sbjct: 1404 gcgaaggactaagtgcag-ggtggactctttctggatgttgtagtc 1360 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 276 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 217 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 216 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 157 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 156 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 97 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 96 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 49 Score = 101 bits (51), Expect = 2e-18 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 1919 tccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 1860 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1859 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1816
>gb|BC006680.1| Mus musculus ubiquitin C, mRNA (cDNA clone MGC:7811 IMAGE:3500023), complete cds Length = 1891 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1189 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1130 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1129 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1070 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1069 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1010 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1009 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 950 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 949 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 905 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 733 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 674 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 673 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 614 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 613 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 554 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 553 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 494 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 493 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 449 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || || ||||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1408 gaggcgaaggactaagtgcagggtggactctttctggatgttgtagtctgacagggtgcg 1349 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1348 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 1289 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 1288 cttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgacctccagggt 1229 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 1228 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 1169 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 1168 caggtgcag-ggtggactctttctggatgttgtagtc 1133 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 952 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 893 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 892 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 833 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 832 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 773 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 772 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 713 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 712 caggtgcag-ggtggactctttctggatgttgtagtc 677 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 496 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 437 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 436 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 377 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 376 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 317 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 316 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 257 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 256 caggtgcag-ggtggactctttctggatgttgtagtc 221 Score = 216 bits (109), Expect = 5e-53 Identities = 242/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1645 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1586 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1585 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1526 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1525 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 1466 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||| ||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1465 ctccagggtgatggttttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 1406 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || || | |||||| ||||||| ||||||||||||||||| Sbjct: 1405 gcgaaggactaagtgcag-ggtggactctttctggatgttgtagtc 1361 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 277 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 218 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 217 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 158 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 157 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 98 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 97 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 50 Score = 101 bits (51), Expect = 2e-18 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 1692 tccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 1633 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1632 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1589
>ref|NM_057428.3| Drosophila melanogaster Ribosomal protein L40 CG2960-RA (RpL40), mRNA Length = 660 Score = 232 bits (117), Expect = 8e-58 Identities = 200/228 (87%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||||||||| ||||| ||||||||||| || |||||||| | | Sbjct: 348 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 289 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||||||||||||||| |||||||| || || ||||| || |||||||| || || || Sbjct: 288 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 229 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| | ||| ||| Sbjct: 228 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 169 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcata 397 |||| ||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 168 tccaaggtgatggtcttgccggtgagggttttcacgaagatctgcata 121 Score = 52.0 bits (26), Expect = 0.002 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||||| |||||| | |||||||||||| ||||||||||| Sbjct: 339 aggcggagcaccaagtgcagggt-ggactccttctgaatgttgtagtc 293
>gb|AY075451.1| Drosophila melanogaster RE10554 full length cDNA Length = 602 Score = 232 bits (117), Expect = 8e-58 Identities = 200/228 (87%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||||||||| ||||| ||||||||||| || |||||||| | | Sbjct: 289 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 230 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||||||||||||||| |||||||| || || ||||| || |||||||| || || || Sbjct: 229 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 170 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| | ||| ||| Sbjct: 169 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 110 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcata 397 |||| ||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 109 tccaaggtgatggtcttgccggtgagggttttcacgaagatctgcata 62 Score = 52.0 bits (26), Expect = 0.002 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||||| |||||| | |||||||||||| ||||||||||| Sbjct: 280 aggcggagcaccaagtgcagggt-ggactccttctgaatgttgtagtc 234
>dbj|AK168448.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920021C12 product:ubiquitin C, full insert sequence Length = 980 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 746 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 687 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 686 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 627 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 626 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 567 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 566 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 507 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 506 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 462 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 509 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 450 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 449 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 390 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 389 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 330 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 329 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 270 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 269 caggtgcag-ggtggactctttctggatgttgtagtc 234 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 290 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 231 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 230 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 171 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 170 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 111 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 110 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 63 Score = 101 bits (51), Expect = 2e-18 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 793 tccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 734 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 733 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 690
>dbj|AK010964.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510015A11 product:POLYUBIQUITIN (UBIQUITIN B) homolog [Mus musculus], full insert sequence Length = 1208 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 518 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 459 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 458 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 399 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 398 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 339 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 338 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 279 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 278 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 234 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || || ||||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 737 gaggcgaaggactaagtgcagggtggactctttctggatgttgtagtctgacagggtgcg 678 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 677 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 618 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 617 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 558 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 557 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 498 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 497 caggtgcag-ggtggactctttctggatgttgtagtc 462 Score = 216 bits (109), Expect = 5e-53 Identities = 242/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 974 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 915 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 914 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 855 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 854 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 795 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||| ||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 794 ctccagggtgatggttttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 735 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || || | |||||| ||||||| ||||||||||||||||| Sbjct: 734 gcgaaggactaagtgcag-ggtggactctttctggatgttgtagtc 690 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 290 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 231 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 230 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 171 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 170 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 111 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 110 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 63 Score = 101 bits (51), Expect = 2e-18 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 1021 tccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 962 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 961 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 918
>gb|AC092217.1|AC092217 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR11D14, complete sequence Length = 158347 Score = 232 bits (117), Expect = 8e-58 Identities = 200/228 (87%) Strand = Plus / Plus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||||||||| ||||| ||||||||||| || |||||||| | | Sbjct: 54634 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 54693 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||||||||||||||| |||||||| || || ||||| || |||||||| || || || Sbjct: 54694 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 54753 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| | ||| ||| Sbjct: 54754 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 54813 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcata 397 |||| ||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 54814 tccaaggtgatggtcttgccggtgagggttttcacgaagatctgcata 54861 Score = 52.0 bits (26), Expect = 0.002 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||||| |||||| | |||||||||||| ||||||||||| Sbjct: 54643 aggcggagcaccaagtgcagggt-ggactccttctgaatgttgtagtc 54689
>dbj|AK012427.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700054O04 product:ubiquitin, beta-galactosidase related, full insert sequence Length = 1903 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 982 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 923 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 922 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 863 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 862 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 803 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 802 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 743 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 742 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 698 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 754 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 695 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 694 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 635 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 634 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 575 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 574 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 515 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 514 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 470 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 296 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 237 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 236 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 177 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 176 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 117 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 116 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 57 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 56 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 12 Score = 218 bits (110), Expect = 1e-53 Identities = 244/287 (85%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1670 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1611 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1610 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1551 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1550 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1491 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatct-gcataccacccctga 407 ||||||||||||||||||||| || |||||||| || ||||||| |||| ||||| |||| Sbjct: 1490 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctggcatgccacctctga 1431 Query: 408 ggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1430 ggcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1385 Score = 204 bits (103), Expect = 2e-49 Identities = 244/288 (84%), Gaps = 3/288 (1%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1441 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1382 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1381 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1322 Query: 289 gatgccctccttgtcctggatctttgccttcaca-ttgtcgatggtgtcagatgactcaa 347 |||||||||||||||||||||||||||||| ||| || || ||||||||| | ||| | Sbjct: 1321 gatgccctccttgtcctggatctttgccttgacatttctctatggtgtcactgggctcga 1262 Query: 348 cctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctga 407 |||||||||||||||||||||| || |||||||| || ||||||||||| ||||| |||| Sbjct: 1261 cctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctga 1202 Query: 408 ggcggagcaccangtgcaganttggactc-cttctggatgttgtagtc 454 |||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1201 ggcgaaggaccaggtgcag-ggtggactcttttctggatgttgtagtc 1155 Score = 204 bits (103), Expect = 2e-49 Identities = 244/288 (84%), Gaps = 3/288 (1%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactcctt-ctggatnttgtagtccg 227 |||||| | |||||| || |||| ||| ||||| ||||| || |||||| |||||||| | Sbjct: 1212 gccacctctgaggcgaaggaccaggtgcagggtggactcttttctggatgttgtagtctg 1153 Query: 228 ccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtg 287 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || | Sbjct: 1152 acagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcagggg 1093 Query: 288 ggatgccctccttgtcc-tggatctttgccttcacattgtcgatggtgtcagatgactca 346 ||||||||||||||||| |||||||||||||| ||||| || ||||||||| | ||| Sbjct: 1092 ggatgccctccttgtccctggatctttgccttgacattctctatggtgtcactgggctcg 1033 Query: 347 acctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctg 406 ||||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||| Sbjct: 1032 acctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctg 973 Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 972 aggcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 926 Score = 204 bits (103), Expect = 2e-49 Identities = 244/288 (84%), Gaps = 3/288 (1%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 526 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 467 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 466 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 407 Query: 289 gatgccc-tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaa 347 ||||||| ||||||||||||||||||||||| ||||| || ||||||||| | ||| | Sbjct: 406 gatgcccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcga 347 Query: 348 cctccagggtgatggtcttgccagtgagggtcttaacgaagatct-gcataccacccctg 406 |||||||||||||||||||||| || |||||||| || ||||||| |||| ||||| ||| Sbjct: 346 cctccagggtgatggtcttgcctgtcagggtcttcacaaagatctggcatgccacctctg 287 Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 286 aggcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 240 Score = 172 bits (87), Expect = 6e-40 Identities = 212/252 (84%), Gaps = 2/252 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 ||||| |||||||| |||||||| | ||| ||||||||||| || |||||||| || ||| Sbjct: 1863 gactctttctggatgttgtagtctgacagggtgcggccatcttccagctgcttgcctgca 1804 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 ||||| || | ||||||||| || |||||||||||||||||||||||||||||||| || Sbjct: 1803 aagatcagcctctgctggtcagg-gggatgccctccttgtcctggatctttgccttgacc 1745 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 || | | |||| || | ||| || |||||||||||||||||||| || |||||||| Sbjct: 1744 ttcttggtggtaacactgggctcgacgtccagggtgatggtcttgcctgtcagggtcttc 1685 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 || ||||||||||| ||||| |||||||| || |||| |||||| ||||||| ||||| Sbjct: 1684 acaaagatctgcatgccacctctgaggcgaaggaccaggtgcag-ggtggactctttctg 1626 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 1625 gatgttgtagtc 1614 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 1865 tggactctttctggatgttgtagtc 1841
>gb|BC094012.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:5037932), complete cds Length = 1209 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 733 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 674 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 673 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 614 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 613 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 554 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 553 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 494 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 493 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 449 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 505 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 446 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 445 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 386 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 385 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 326 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 325 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 266 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 265 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 221 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 961 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 902 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 901 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 842 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 841 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 782 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 |||||||||||| |||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 781 ctccagggtgatagtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 722 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 721 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 677 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 277 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 218 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 217 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 158 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 157 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 98 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 97 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 50 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 1008 tccaaggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 949 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 948 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 905
>ref|NM_001009202.1| Ovis aries polyubiquitin (LOC443016), mRNA Length = 1102 Score = 232 bits (117), Expect = 8e-58 Identities = 232/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| |||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 766 cggagaaccaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggcca 707 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 706 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 647 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 646 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 587 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| ||||||||||||||||||||||| || ||||| |||| | Sbjct: 586 gtcttgccggtcagggtcttcacgaagatctgcataccacccctcagacggagaaccagg 527 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | |||||||||||||||||||| Sbjct: 526 tgcag-ggtcgactccttctggatgttgta 498 Score = 224 bits (113), Expect = 2e-55 Identities = 231/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| |||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 538 cggagaaccaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggcca 479 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 478 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 419 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 418 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 359 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| ||||||||||||||||||||||| | ||||| |||| | Sbjct: 358 gtcttgccggtcagggtcttcacgaagatctgcataccacccctcatacggagaaccagg 299 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | |||||||||||||||||||| Sbjct: 298 tgcag-ggtcgactccttctggatgttgta 270 Score = 204 bits (103), Expect = 2e-49 Identities = 224/264 (84%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||||||||| ||||| || ||||| || | |||||||||||||| || Sbjct: 988 accaggtgcagggtcgactctttctgaatgttgtaatcagaaagagtgcggccatcttcc 929 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 928 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 869 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| |||||||| || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 868 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 809 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| || |||||||||||||||||||| || ||||| |||| |||||| Sbjct: 808 ccggtcagggtcttcacaaagatctgcataccacccctcagacggagaaccaggtgcag- 750 Query: 428 nttggactccttctggatgttgta 451 | |||||||||||||||||||| Sbjct: 749 ggtcgactccttctggatgttgta 726 Score = 182 bits (92), Expect = 7e-43 Identities = 184/215 (85%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| |||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 310 cggagaaccaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggcca 251 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 250 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 191 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||| Sbjct: 190 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccagggtgatg 131 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||| || ||||| || |||||||| ||||| Sbjct: 130 gtcttgccggtcagggttttcacgaagatttgcat 96
>gb|AF038129.1|AF038129 Ovis aries polyubiquitin mRNA, complete cds Length = 1102 Score = 232 bits (117), Expect = 8e-58 Identities = 232/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| |||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 766 cggagaaccaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggcca 707 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 706 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 647 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 646 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 587 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| ||||||||||||||||||||||| || ||||| |||| | Sbjct: 586 gtcttgccggtcagggtcttcacgaagatctgcataccacccctcagacggagaaccagg 527 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | |||||||||||||||||||| Sbjct: 526 tgcag-ggtcgactccttctggatgttgta 498 Score = 224 bits (113), Expect = 2e-55 Identities = 231/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| |||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 538 cggagaaccaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggcca 479 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 478 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 419 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 418 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 359 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| ||||||||||||||||||||||| | ||||| |||| | Sbjct: 358 gtcttgccggtcagggtcttcacgaagatctgcataccacccctcatacggagaaccagg 299 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | |||||||||||||||||||| Sbjct: 298 tgcag-ggtcgactccttctggatgttgta 270 Score = 204 bits (103), Expect = 2e-49 Identities = 224/264 (84%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||||||||| ||||| || ||||| || | |||||||||||||| || Sbjct: 988 accaggtgcagggtcgactctttctgaatgttgtaatcagaaagagtgcggccatcttcc 929 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 928 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 869 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| |||||||| || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 868 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 809 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| || |||||||||||||||||||| || ||||| |||| |||||| Sbjct: 808 ccggtcagggtcttcacaaagatctgcataccacccctcagacggagaaccaggtgcag- 750 Query: 428 nttggactccttctggatgttgta 451 | |||||||||||||||||||| Sbjct: 749 ggtcgactccttctggatgttgta 726 Score = 182 bits (92), Expect = 7e-43 Identities = 184/215 (85%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| |||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 310 cggagaaccaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggcca 251 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 250 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 191 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||| Sbjct: 190 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccagggtgatg 131 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||| || ||||| || |||||||| ||||| Sbjct: 130 gtcttgccggtcagggttttcacgaagatttgcat 96
>dbj|AP006454.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1472F02 Length = 55065 Score = 232 bits (117), Expect = 8e-58 Identities = 182/204 (89%) Strand = Plus / Plus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| |||||||||||||| ||||| ||||| || |||||||||||||| || || Sbjct: 17165 gtggagggtggactccttctggatgttgtaatccgcgagggtgcggccatcctctagttg 17224 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| |||||||||||||| || |||||||| ||||| ||||||||||||||||| ||||| Sbjct: 17225 cttgccagcaaagatgagacgttgctggtcaggtggaatgccctccttgtcctgaatctt 17284 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 |||||||||||||| || || ||||| ||||||||||| |||||||||||||||||||| Sbjct: 17285 ggccttcacattgtcaattgtatcagaggactcaacctcgagggtgatggtcttgccagt 17344 Query: 373 gagggtcttaacgaagatctgcat 396 ||| ||||| || ||||||||||| Sbjct: 17345 gagtgtcttcacaaagatctgcat 17368 Score = 200 bits (101), Expect = 3e-48 Identities = 234/278 (84%), Gaps = 1/278 (0%) Strand = Plus / Plus Query: 174 cacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagag 233 |||||||||||||||||| ||| | ||| ||||||||||| || ||||| || ||||| | Sbjct: 16918 cacggaggcggagcaccaggtgcaaggtggactccttctgaatgttgtaatcagccagtg 16977 Query: 234 tgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgc 293 | || |||||||| |||||||| | |||||||||||||||||||||||||| || || | Sbjct: 16978 tacgtccatcctcgagctgcttgtctgcaaagatgaggcgctgctggtccgggggaattc 17037 Query: 294 cctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcca 353 ||||||||||||| ||||| ||||||||||||||||| |||| || ||||| ||| | | Sbjct: 17038 cctccttgtcctgaatcttcgccttcacattgtcgatcttgtccgaggactcgaccgcaa 17097 Query: 354 gggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgga 413 | ||||||||||| || || | |||||| || ||||||||||| || ||||||||||| | Sbjct: 17098 gagtgatggtctttcctgtcaaggtcttcacaaagatctgcatgcctcccctgaggcgaa 17157 Query: 414 gcaccangtgcaganttggactccttctggatgttgta 451 | || | ||| || |||||||||||||||||||||| Sbjct: 17158 ggacaaggtggag-ggtggactccttctggatgttgta 17194 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 284 ggtgggatgccctccttgtcctggatctttgccttca 320 ||||| |||||||||||||| ||||| |||| ||||| Sbjct: 31611 ggtggtatgccctccttgtcatggatttttgacttca 31647
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 232 bits (117), Expect = 8e-58 Identities = 182/204 (89%) Strand = Plus / Plus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 ||||||||| |||||||||||||| ||||| ||||| || |||||||||||||| || || Sbjct: 145029 gtggagggtggactccttctggatgttgtaatccgcgagggtgcggccatcctctagttg 145088 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| |||||||||||||| || |||||||| ||||| ||||||||||||||||| ||||| Sbjct: 145089 cttgccagcaaagatgagacgttgctggtcaggtggaatgccctccttgtcctgaatctt 145148 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 |||||||||||||| || || ||||| ||||||||||| |||||||||||||||||||| Sbjct: 145149 ggccttcacattgtcaattgtatcagaggactcaacctcgagggtgatggtcttgccagt 145208 Query: 373 gagggtcttaacgaagatctgcat 396 ||| ||||| || ||||||||||| Sbjct: 145209 gagtgtcttcacaaagatctgcat 145232 Score = 200 bits (101), Expect = 3e-48 Identities = 234/278 (84%), Gaps = 1/278 (0%) Strand = Plus / Plus Query: 174 cacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagag 233 |||||||||||||||||| ||| | ||| ||||||||||| || ||||| || ||||| | Sbjct: 144782 cacggaggcggagcaccaggtgcaaggtggactccttctgaatgttgtaatcagccagtg 144841 Query: 234 tgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgc 293 | || |||||||| |||||||| | |||||||||||||||||||||||||| || || | Sbjct: 144842 tacgtccatcctcgagctgcttgtctgcaaagatgaggcgctgctggtccgggggaattc 144901 Query: 294 cctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcca 353 ||||||||||||| ||||| ||||||||||||||||| |||| || ||||| ||| | | Sbjct: 144902 cctccttgtcctgaatcttcgccttcacattgtcgatcttgtccgaggactcgaccgcaa 144961 Query: 354 gggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgga 413 | ||||||||||| || || | |||||| || ||||||||||| || ||||||||||| | Sbjct: 144962 gagtgatggtctttcctgtcaaggtcttcacaaagatctgcatgcctcccctgaggcgaa 145021 Query: 414 gcaccangtgcaganttggactccttctggatgttgta 451 | || | ||| || |||||||||||||||||||||| Sbjct: 145022 ggacaaggtggag-ggtggactccttctggatgttgta 145058
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence Length = 149454 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Plus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 4150 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 4209 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 4210 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 4269 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 4270 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 4329 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 4330 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 4389 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 4390 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 4434 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Plus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 3694 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 3753 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 3754 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 3813 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 3814 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 3873 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 3874 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 3933 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 3934 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 3978 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Plus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 3010 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 3069 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 3070 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 3129 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 3130 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 3189 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 3190 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 3249 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 3250 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 3294 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Plus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 4387 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 4446 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 4447 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 4506 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 4507 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 4566 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 4567 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 4626 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 4627 caggtgcag-ggtggactctttctggatgttgtagtc 4662 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Plus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 3931 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 3990 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 3991 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 4050 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 4051 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 4110 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 4111 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 4170 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 4171 caggtgcag-ggtggactctttctggatgttgtagtc 4206 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Plus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || || ||||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 3475 gaggcgaaggactaagtgcagggtggactctttctggatgttgtagtctgacagggtgcg 3534 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 3535 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 3594 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 3595 cttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgacctccagggt 3654 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 3655 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 3714 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 3715 caggtgcag-ggtggactctttctggatgttgtagtc 3750 Score = 216 bits (109), Expect = 5e-53 Identities = 242/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Plus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 3238 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 3297 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 3298 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 3357 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 3358 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 3417 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||| ||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 3418 ctccagggtgatggttttgcctgtcagggtcttcacaaagatctgcatcccacctctgag 3477 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || || | |||||| ||||||| ||||||||||||||||| Sbjct: 3478 gcgaaggactaagtgcag-ggtggactctttctggatgttgtagtc 3522 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Plus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 4606 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 4665 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 4666 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 4725 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 4726 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 4785 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 4786 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 4833 Score = 101 bits (51), Expect = 2e-18 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 2963 tccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 3022 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 3023 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 3066
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 232 bits (117), Expect = 8e-58 Identities = 200/228 (87%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||||||||| ||||| ||||||||||| || |||||||| | | Sbjct: 196973 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 196914 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||||||||||||||| |||||||| || || ||||| || |||||||| || || || Sbjct: 196913 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 196854 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| | ||| ||| Sbjct: 196853 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 196794 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcata 397 |||| ||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 196793 tccaaggtgatggtcttgccggtgagggttttcacgaagatctgcata 196746 Score = 52.0 bits (26), Expect = 0.002 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||||| |||||| | |||||||||||| ||||||||||| Sbjct: 196964 aggcggagcaccaagtgcagggt-ggactccttctgaatgttgtagtc 196918
>gb|AF502576.1| Musa acuminata ubiquitin (UBQ2) gene, complete cds Length = 1602 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||| |||||||| | |||||||||||||||||||||||| |||||||| || Sbjct: 456 gccaccacggagacggagcacaaggtggagggtcgactccttctggatattgtagtcggc 397 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || |||||||||||||| ||||| || ||||| |||||||| | ||||| ||||| || Sbjct: 396 caaggtgcggccatcctcgagctgtttgccagcgaagatgagcctttgctgatccggggg 337 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||||||||||||||| ||||| |||||||| ||||||||||| || ||||| Sbjct: 336 aatgccttccttgtcctggatcttggccttgacattgtcaatggtgtcagaggattcaac 277 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||||||||| || ||||| || || || ||||| ||||| ||||| | ||| Sbjct: 276 ctcaagggtgatggtctttccggtgagagttttgacaaagatttgcatgccaccacggag 217 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| || | ||| || |||||||||| |||||||||||||| Sbjct: 216 gcggagtacaaggtggag-ggtggactccttttggatgttgtagtc 172 Score = 208 bits (105), Expect = 1e-50 Identities = 217/255 (85%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||| |||||||| | ||||||||| |||||||||||||| |||||||| || Sbjct: 1140 gccaccacggagacggagcacaaggtggagggtggactccttctggatattgtagtcggc 1081 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || ||||||||||| |||||||| ||||| |||||||| | || || ||||| || Sbjct: 1080 caaggtacggccatcctcgagctgcttgccagcgaagatgagcctttgttgatccggggg 1021 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||||||||||||||||| ||||| |||||||| |||||||| || |||||| Sbjct: 1020 aatgccctccttgtcctggatcttggccttgacattgtctatggtgtccgagctctcaac 961 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| ||||| |||||||| ||||| || |||||||| || |||||||| ||||| | ||| Sbjct: 960 ctcaagggtaatggtcttaccagtaagtgtcttaacaaaaatctgcatgccaccacggag 901 Query: 409 gcggagcaccangtg 423 |||||||||| ||| Sbjct: 900 acggagcaccaagtg 886 Score = 200 bits (101), Expect = 3e-48 Identities = 240/286 (83%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||| |||||||||||||||||||| || ||||||||||| || ||||| || Sbjct: 912 gccaccacggagacggagcaccaagtggagggtagattccttctggatattatagtcagc 853 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || ||||||||||| | ||||| ||||| |||||||| | ||||| || || || Sbjct: 852 caaggtacggccatcctccaattgcttgccagcgaagatgagcctttgctgatctggggg 793 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||||||||||||||| ||||| |||||||| |||||||| || |||||| Sbjct: 792 aatgccttccttgtcctggatcttggccttgacattgtctatggtgtccgagctctcaac 733 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 |||||| ||||||||||| |||||||| || ||||| || |||||||| ||||| | ||| Sbjct: 732 ctccagagtgatggtcttcccagtgagtgttttaacaaaaatctgcatgccaccacggag 673 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | ||| || |||||||||||||||| |||||||| Sbjct: 672 acggagcacaaggtggag-ggtggactccttctggatattgtagtc 628 Score = 200 bits (101), Expect = 3e-48 Identities = 240/286 (83%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||| |||||||| | ||||||||| |||||||||||||| |||||||| || Sbjct: 684 gccaccacggagacggagcacaaggtggagggtggactccttctggatattgtagtcggc 625 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || ||||||||||| |||||||| ||||| |||||||| | ||||| || || || Sbjct: 624 caaggtacggccatcctcgagctgcttgccagcgaagatgagcctttgctgatctggggg 565 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||||||||||||||| ||||| |||||||| |||||||| || |||||| Sbjct: 564 aatgccttccttgtcctggatcttggccttgacattgtctatggtgtccgagctctcaac 505 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| ||||| |||||||| ||||| || |||||||| || |||||||| ||||| | ||| Sbjct: 504 ctcaagggtaatggtcttaccagtaagtgtcttaacaaaaatctgcatgccaccacggag 445 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| | ||| || | |||||||||||||| |||||||| Sbjct: 444 acggagcacaaggtggag-ggtcgactccttctggatattgtagtc 400 Score = 178 bits (90), Expect = 1e-41 Identities = 203/241 (84%) Strand = Plus / Minus Query: 168 ggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccg 227 ||||||| ||||| || || |||| ||| || || || ||||||||||| || ||||| | Sbjct: 1597 ggccaccgcggagacgaaggaccaggtgaagagtggattccttctggatgttatagtctg 1538 Query: 228 ccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtg 287 |||| ||||| |||||||| ||||||||||| |||||||| || | ||| ||||| |||| Sbjct: 1537 ccagtgtgcgcccatcctcgagctgcttacccgcaaagatcagcctctgttggtctggtg 1478 Query: 288 ggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaa 347 |||| |||||||||||||| ||||||||||||||||||||||| ||||| || ||||| Sbjct: 1477 ggattccctccttgtcctgtatctttgccttcacattgtcgatagtgtccgagctctcaa 1418 Query: 348 cctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctga 407 ||||||| ||||||||||| || |||||||| || || || || ||||| || ||||||| Sbjct: 1417 cctccagagtgatggtcttccccgtgagggttttcacaaaaatttgcatccctcccctga 1358 Query: 408 g 408 | Sbjct: 1357 g 1357 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||||||||||||||| || | ||||||||| |||||||| ||||| |||||||| || Sbjct: 228 gccaccacggaggcggagtacaaggtggagggtggactccttttggatgttgtagtcagc 169 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||||||||||||||| ||||| |||||||| || | | ||||||||||| || Sbjct: 168 aagggtgcggccatcctcaagttgcttgccagcaaatatcaacctttgctggtccggggg 109 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 || |||||||| ||||||||||| || || ||||||||||| |||||||| || ||||| Sbjct: 108 tattccctccttatcctggatcttggctttgacattgtcgattgtgtcagaggattcaac 49 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| |||||||| ||||| |||||||| || || || ||||| ||||| Sbjct: 48 ctcaagggtgatcgtctttccagtgagagttttgacaaagatttgcat 1 Score = 168 bits (85), Expect = 1e-38 Identities = 224/270 (82%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||||||||||||| || ||||||||||| || ||||| |||| || ||||||||| Sbjct: 1352 agcaccaagtggagggtagattccttctggatattatagtcagccaaggtacggccatcc 1293 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || | ||||| ||||| |||||||| | ||||| || || || ||||| ||||||||| Sbjct: 1292 tccaattgcttgccagcgaagatgagcctttgctgatctgggggaatgccttccttgtcc 1233 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 |||||||| ||||| |||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 1232 tggatcttggccttgacattgtctatggtgtccgagctctcaacctccagagtgatggtc 1173 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgc 424 || || ||||| || ||||| || |||||||| ||||| | ||| |||||||| | ||| Sbjct: 1172 ttcccggtgagtgttttaacaaaaatctgcatgccaccacggagacggagcacaaggtgg 1113 Query: 425 aganttggactccttctggatgttgtagtc 454 || |||||||||||||||| |||||||| Sbjct: 1112 ag-ggtggactccttctggatattgtagtc 1084
>gb|AC004380.1|AC004380 Drosophila melanogaster DNA sequence (P1 DS06843 (D96)), complete sequence Length = 51065 Score = 232 bits (117), Expect = 8e-58 Identities = 200/228 (87%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| ||||||||||||||||| ||||| ||||||||||| || |||||||| | | Sbjct: 21114 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 21055 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||||||||||||||| |||||||| || || ||||| || |||||||| || || || Sbjct: 21054 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 20995 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| | ||| ||| Sbjct: 20994 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 20935 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcata 397 |||| ||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 20934 tccaaggtgatggtcttgccggtgagggttttcacgaagatctgcata 20887 Score = 52.0 bits (26), Expect = 0.002 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||||| |||||| | |||||||||||| ||||||||||| Sbjct: 21105 aggcggagcaccaagtgcagggt-ggactccttctgaatgttgtagtc 21059
>ref|NM_019639.3| Mus musculus ubiquitin C (Ubc), mRNA Length = 2779 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2545 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 2486 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 2485 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 2426 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 2425 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 2366 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 2365 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 2306 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2305 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2261 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2089 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 2030 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 2029 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1970 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1969 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1910 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1909 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1850 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1849 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1805 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1861 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1802 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1801 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1742 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1741 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1682 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1681 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1622 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1621 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1577 Score = 232 bits (117), Expect = 8e-58 Identities = 244/286 (85%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 493 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 434 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 433 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 374 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 373 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 314 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 313 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 254 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 253 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 209 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 940 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 881 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 880 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 821 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 820 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 761 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 760 gatggtcttgcctgtcagggtcttcacaaagatctgcatcccacctctgaggcgaaggac 701 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 700 caggtgcag-ggtggactctttctggatgttgtagtc 665 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 2317 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 2258 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 2257 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 2198 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 2197 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 2138 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||| ||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 2137 ctccagggtgatggttttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 2078 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2077 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2033 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1633 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1574 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1573 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1514 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1513 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1454 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || ||||| || || ||||||||||| ||||| ||||| Sbjct: 1453 ctccagggtgatggtcttgcctgtcagggttttcacaaagatctgcatgccacctctgag 1394 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1393 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1349 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1405 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1346 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || | Sbjct: 1345 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcagggga 1286 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1285 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 1226 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1225 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 1166 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 1165 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 1121 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 1177 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 1118 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 1117 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 1058 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 1057 gatgccctccttgtcctggatctttgccttgacattctctatggtgtcactgggctcgac 998 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || ||||| || || ||||||||||| ||||| ||||| Sbjct: 997 ctccagggtgatggtcttgcctgtcagggttttcacaaagatctgcatcccacctctgag 938 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 937 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 893 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 712 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 653 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||| | || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 652 gccaccttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 593 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 592 cttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgacctccagggt 533 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 532 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 473 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 472 caggtgcag-ggtggactctttctggatgttgtagtc 437 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 265 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 206 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 205 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 146 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 145 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 86 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 85 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 38 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||| ||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 2592 tccaaggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 2533 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 2532 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 2489
>gb|DQ216250.1| Taeniopygia guttata clone 0058P0027F01 ubiquitin C variant 9-like mRNA, complete sequence Length = 1074 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| || || |||||||| |||||||| | || ||||| Sbjct: 515 gaggcgcagcaccaggtgcagggtggattctttctggatgttgtagtcggagagggtgcg 456 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||||||||||||||| || | ||||||||| || ||||||||||| Sbjct: 455 cccatcttccagctgcttaccagcaaagatcagcctctgctggtcaggagggatgccctc 396 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||||||||| || ||||||||| | |||||| |||| | | Sbjct: 395 cttgtcctggatcttggccttcacattttcaatggtgtcactgggctcaacttccaagat 336 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 335 gatggtcttgccggtcagggtcttcacgaagatctgcatcccacctctcaggcgcagcac 276 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| || ||||||||||| ||||||||||| Sbjct: 275 caggtgcagagtt-gactccttctgaatgttgtagtc 240 Score = 208 bits (105), Expect = 1e-50 Identities = 241/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| ||||||| ||| ||||| || ||||||||||| |||||||| | Sbjct: 752 gccacccctgaggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcgga 693 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||| ||||| || |||||||| ||||| || || || | ||||||||| || || Sbjct: 692 gagggtgcgcccatcttccagctgcttgccagcgaaaatcagcctctgctggtctggggg 633 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||| ||||||||||| ||||| ||||| ||||||||||| | |||||| Sbjct: 632 aatgccttccttatcctggatcttggccttgacattctcgatggtgtcgctgggctcaac 573 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 572 ttccagggtgatggtcttgccagtcagggtcttgacgaagatctgcatcccacccctgag 513 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| ||||||| |||||| |||| || ||||||||||||||||| Sbjct: 512 gcgcagcaccaggtgcag-ggtggattctttctggatgttgtagtc 468 Score = 188 bits (95), Expect = 1e-44 Identities = 187/218 (85%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| || || ||||||||||| || |||||||| | ||| |||||| Sbjct: 286 aggcgcagcaccaggtgcagagttgactccttctgaatgttgtagtcggacagggtgcgg 227 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || ||||||||||| |||||||| || | ||||||||| || || ||||||||| Sbjct: 226 ccatcttccagctgcttaccggcaaagatcagcctctgctggtctgggggaatgccctcc 167 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| |||||| Sbjct: 166 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcaagggtg 107 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||| |||||||| || ||||||||||| Sbjct: 106 atggtcttgccagtcagggtcttcacaaagatctgcat 69
>gb|DQ216237.1| Taeniopygia guttata clone 0058P0020B09 ubiquitin C variant 1-like mRNA, complete sequence Length = 1346 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| || ||||||||||| |||||||| | || ||||| Sbjct: 743 gaggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcagagagggtgcg 684 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||||| || ||||||||||||||||| || | ||||||||| || ||||| || || Sbjct: 683 cccatcctccagttgcttaccagcaaagatcagcctctgctggtcaggagggataccttc 624 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||||||||| || ||||||||| | |||||| |||||||| Sbjct: 623 cttgtcctggatcttggccttcacattttcaatggtgtcactgggctcaacttccagggt 564 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||||||||||||||| |||||||| || ||||||||||| ||||| || ||||| ||||| Sbjct: 563 gatggtcttgccagtcagggtcttcacaaagatctgcatcccacctctcaggcgcagcac 504 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| |||| |||||||||||||||||||| Sbjct: 503 caggtgcag-ggtggattccttctggatgttgtagtc 468 Score = 220 bits (111), Expect = 3e-54 Identities = 235/276 (85%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | ||| ||||| Sbjct: 514 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcagacagggtgcgc 455 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || ||||| || ||| Sbjct: 454 ccatcttccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttcc 395 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| |||||||||||| | ||| ||||| || ||| Sbjct: 394 ttgtcctggatcttggccttcacattctcgatggtgtcactgggctccacctcgagagtg 335 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || ||||| || |||||||||||||| ||||| || ||||| |||||| Sbjct: 334 atggtcttgccggtcagggttttcacgaagatctgcatcccacctctcaggcgcagcacc 275 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||||||| || ||||| ||||||||||||||||| Sbjct: 274 aggtgcagagtt-gactctttctggatgttgtagtc 240 Score = 216 bits (109), Expect = 5e-53 Identities = 242/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| ||||||| ||| | || |||||||||||||| ||||| || | Sbjct: 980 gccacccctgaggcgcagcaccaggtgcaaagttgactccttctggatgttgtaatcgga 921 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||| ||||| || |||||||| ||||| || || || | ||||||||| || || Sbjct: 920 cagggtgcgcccatcttccagctgcttgccagcgaaaatcagcctctgctggtctggggg 861 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||||||||||||||| ||||||||||| |||||||||||| | |||||| Sbjct: 860 aatgccttccttgtcctggatcttggccttcacattctcgatggtgtcactgggctcaac 801 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||||| |||||||| || || |||||||| ||||||||||| Sbjct: 800 ttccagggtgatggtcttgccagtcagggtcttcacaaaaatctgcatcccacccctgag 741 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| ||||||| |||||| |||| |||||||||||||||||||| Sbjct: 740 gcgcagcaccaggtgcag-ggtggattccttctggatgttgtagtc 696 Score = 172 bits (87), Expect = 6e-40 Identities = 185/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| || || ||||| |||||||| |||||||| | || ||||| Sbjct: 286 aggcgcagcaccaggtgcagagttgactctttctggatgttgtagtcggagagggtgcgc 227 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || || ||||||||| Sbjct: 226 ccatcttccagctgcttgccagcaaagatcagcctctgctggtctgggggaatgccctcc 167 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| |||||| Sbjct: 166 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcaagggtg 107 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||| |||||||| || ||||||||||| Sbjct: 106 atggtcttgccagtcagggtcttcacaaagatctgcat 69
>gb|DQ216234.1| Taeniopygia guttata clone 0058P0013A07 ubiquitin C variant 1-like mRNA, complete sequence Length = 1347 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| || ||||||||||| |||||||| | || ||||| Sbjct: 743 gaggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcagagagggtgcg 684 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||||| || ||||||||||||||||| || | ||||||||| || ||||| || || Sbjct: 683 cccatcctccagttgcttaccagcaaagatcagcctctgctggtcaggagggataccttc 624 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||||||||| || ||||||||| | |||||| |||||||| Sbjct: 623 cttgtcctggatcttggccttcacattttcaatggtgtcactgggctcaacttccagggt 564 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||||||||||||||| |||||||| || ||||||||||| ||||| || ||||| ||||| Sbjct: 563 gatggtcttgccagtcagggtcttcacaaagatctgcatcccacctctcaggcgcagcac 504 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| |||| |||||||||||||||||||| Sbjct: 503 caggtgcag-ggtggattccttctggatgttgtagtc 468 Score = 220 bits (111), Expect = 3e-54 Identities = 235/276 (85%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | ||| ||||| Sbjct: 514 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcagacagggtgcgc 455 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || ||||| || ||| Sbjct: 454 ccatcttccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttcc 395 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| |||||||||||| | ||| ||||| || ||| Sbjct: 394 ttgtcctggatcttggccttcacattctcgatggtgtcactgggctccacctcgagagtg 335 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || ||||| || |||||||||||||| ||||| || ||||| |||||| Sbjct: 334 atggtcttgccggtcagggttttcacgaagatctgcatcccacctctcaggcgcagcacc 275 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||||||| || ||||| ||||||||||||||||| Sbjct: 274 aggtgcagagtt-gactctttctggatgttgtagtc 240 Score = 194 bits (98), Expect = 2e-46 Identities = 213/251 (84%), Gaps = 1/251 (0%) Strand = Plus / Minus Query: 204 actccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaa 263 ||||||||||||| ||||| || | ||| ||||| ||||| || |||||||| ||||| | Sbjct: 945 actccttctggatgttgtaatcggacagggtgcgcccatcttccagctgcttgccagcga 886 Query: 264 agatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcacat 323 | || | | ||||||||| || | ||||| ||||||||||||||||| |||||||||| Sbjct: 885 aaatcaacctctgctggtctggggaaatgccttccttgtcctggatcttggccttcacat 826 Query: 324 tgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtcttaa 383 | |||||||||||| | |||||| ||||||||||||||||||||||| |||||||| | Sbjct: 825 tctcgatggtgtcactgggctcaacttccagggtgatggtcttgccagtcagggtcttca 766 Query: 384 cgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctgg 443 | || |||||||| |||||||||||||| ||||||| |||||| |||| ||||||||| Sbjct: 765 caaaaatctgcatcccacccctgaggcgcagcaccaggtgcag-ggtggattccttctgg 707 Query: 444 atgttgtagtc 454 ||||||||||| Sbjct: 706 atgttgtagtc 696 Score = 172 bits (87), Expect = 6e-40 Identities = 185/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| || || ||||| |||||||| |||||||| | || ||||| Sbjct: 286 aggcgcagcaccaggtgcagagttgactctttctggatgttgtagtcggagagggtgcgc 227 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || || ||||||||| Sbjct: 226 ccatcttccagctgcttgccagcaaagatcagcctctgctggtctgggggaatgccctcc 167 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| |||||| Sbjct: 166 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcaagggtg 107 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||| |||||||| || ||||||||||| Sbjct: 106 atggtcttgccagtcagggtcttcacaaagatctgcat 69 Score = 48.1 bits (24), Expect = 0.025 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 398 ccacccctgaggcggagcaccangtgcaganttggactccttctggatgttgta 451 |||||||||||||| | ||||| ||||| | || ||||||||||||||||||| Sbjct: 979 ccacccctgaggcgcaccaccaggtgcaaagtt-aactccttctggatgttgta 927
>ref|XM_001001919.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 3 (Ubc), mRNA Length = 794 Score = 230 bits (116), Expect = 3e-57 Identities = 237/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| Sbjct: 768 gaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctgacagggtgcg 709 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 708 gccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctc 649 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 648 cttgtcctggatctttgccttgacattctctatggtgtcactgggctcgacctccagggt 589 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| ||||| |||||||| || || Sbjct: 588 gatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgaggcgaaggac 529 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||| ||||||||||||||||| Sbjct: 528 caggtgcag-ggtggactctttctggatgttgtagtc 493 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 549 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 490 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 489 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 430 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 429 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 370 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 369 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 322
>ref|XM_391117.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10941.1) partial mRNA Length = 465 Score = 230 bits (116), Expect = 3e-57 Identities = 199/227 (87%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| |||||||| |||||||| ||||| |||||||||||||| |||||||| | Sbjct: 227 ccaccacgaaggcggaggaccaagtgaagggtggactccttctggatgttgtagtcgctc 168 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||||||||||||||| || |||||||||||||| ||| Sbjct: 167 agggtgcggccatcctcgagctgcttaccagcaaagataagtcgctgctggtccgggggg 108 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||||||||| | ||| || ||||| |||||||| || ||||| ||| Sbjct: 107 ataccctccttgtcctggatcttggacttgacgttgtcaatggtgtcggaagactccacc 48 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 || |||||||| ||||| || ||||||||||| ||||| |||||||| Sbjct: 47 tcaagggtgatcgtcttccccgtgagggtcttgacgaaaatctgcat 1 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 196 tggactccttctggatgttgtagtc 172
>ref|XM_858590.1| PREDICTED: Canis familiaris similar to ubiquitin B precursor, transcript variant 3 (LOC479513), mRNA Length = 743 Score = 230 bits (116), Expect = 3e-57 Identities = 234/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| |||||| || ||||| |||||||| ||||| || | ||||||||| Sbjct: 545 aggcgcaggaccaggtggagagttgactctttctggatgttgtaatcagaaagagtgcgg 486 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 485 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcaggcgggatgccctct 426 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| ||||||||||| |||||||||||| | ||| |||||||||||| Sbjct: 425 ttatcctggatcttggccttcacattttcgatggtgtcactgggctccacctccagggtg 366 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 365 atggtcttgccggtcagggtcttcacgaagatctgcataccacccctcaggcgcaggacc 306 Query: 419 angtgcaganttggactccttctggatgttgta 451 | ||| ||| || ||||| |||||||||||||| Sbjct: 305 aggtggagagtt-gactctttctggatgttgta 274 Score = 230 bits (116), Expect = 3e-57 Identities = 234/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| |||||| || ||||| |||||||| ||||| || | ||||||||| Sbjct: 317 aggcgcaggaccaggtggagagttgactctttctggatgttgtaatcagaaagagtgcgg 258 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 257 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcaggcgggatgccctct 198 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| ||||||||||| |||||||||||| | ||| |||||||||||| Sbjct: 197 ttatcctggatcttggccttcacattttcgatggtgtcactgggctccacctccagggtg 138 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 137 atggtcttgccggtcagggtcttcacgaagatctgcataccacccctcaggcgcaggacc 78 Query: 419 angtgcaganttggactccttctggatgttgta 451 | ||| ||| || ||||| |||||||||||||| Sbjct: 77 aggtggagagtt-gactctttctggatgttgta 46 Score = 44.1 bits (22), Expect = 0.39 Identities = 54/65 (83%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| |||||| || ||||| |||||||| ||||| || | ||||||||| Sbjct: 89 aggcgcaggaccaggtggagagttgactctttctggatgttgtaatcagaaagagtgcgg 30 Query: 239 ccatc 243 ||||| Sbjct: 29 ccatc 25
>ref|XM_536651.2| PREDICTED: Canis familiaris similar to ubiquitin B precursor, transcript variant 1 (LOC479513), mRNA Length = 881 Score = 230 bits (116), Expect = 3e-57 Identities = 234/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| |||||| || ||||| |||||||| ||||| || | ||||||||| Sbjct: 683 aggcgcaggaccaggtggagagttgactctttctggatgttgtaatcagaaagagtgcgg 624 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 623 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcaggcgggatgccctct 564 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| ||||||||||| |||||||||||| | ||| |||||||||||| Sbjct: 563 ttatcctggatcttggccttcacattttcgatggtgtcactgggctccacctccagggtg 504 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 503 atggtcttgccggtcagggtcttcacgaagatctgcataccacccctcaggcgcaggacc 444 Query: 419 angtgcaganttggactccttctggatgttgta 451 | ||| ||| || ||||| |||||||||||||| Sbjct: 443 aggtggagagtt-gactctttctggatgttgta 412 Score = 230 bits (116), Expect = 3e-57 Identities = 234/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| |||||| || ||||| |||||||| ||||| || | ||||||||| Sbjct: 455 aggcgcaggaccaggtggagagttgactctttctggatgttgtaatcagaaagagtgcgg 396 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 395 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcaggcgggatgccctct 336 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| ||||||||||| |||||||||||| | ||| |||||||||||| Sbjct: 335 ttatcctggatcttggccttcacattttcgatggtgtcactgggctccacctccagggtg 276 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 275 atggtcttgccggtcagggtcttcacgaagatctgcataccacccctcaggcgcaggacc 216 Query: 419 angtgcaganttggactccttctggatgttgta 451 | ||| ||| || ||||| |||||||||||||| Sbjct: 215 aggtggagagtt-gactctttctggatgttgta 184 Score = 172 bits (87), Expect = 6e-40 Identities = 185/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| |||||| || ||||| |||||||| ||||| || | ||||||||| Sbjct: 227 aggcgcaggaccaggtggagagttgactctttctggatgttgtaatcagaaagagtgcgg 168 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 167 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcaggcgggatgccctct 108 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| ||||||||||| |||||||||||| | ||| |||||||||||| Sbjct: 107 ttatcctggatcttggccttcacattttcgatggtgtcactgggctccacctccagggtg 48 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || ||||| || ||||||||| |||| Sbjct: 47 atggtcttgccggttagggttttcacgaagatcggcat 10
>emb|AJ437537.2|OSA437537 Oryza sativa partial mRNA for polyubiquitin-like protein (ub1 gene) Length = 660 Score = 230 bits (116), Expect = 3e-57 Identities = 234/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 176 cggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtg 235 |||||||| || || | ||| ||||| || ||||| ||||| |||||||| || || ||| Sbjct: 450 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 391 Query: 236 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccc 295 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| ||| Sbjct: 390 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggattccc 331 Query: 296 tccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagg 355 ||||||||||||||||| ||||||||||| ||||| ||||| || ||||| ||||||||| Sbjct: 330 tccttgtcctggatcttggccttcacattatcgatcgtgtcggaggactcgacctccagg 271 Query: 356 gtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagc 415 || ||||||||||| ||||||||||| ||||| || ||||| || || | |||||||| Sbjct: 270 gtaatggtcttgccggtgagggtcttcacgaatatttgcatgcctccacgaaggcggagg 211 Query: 416 accangtgcaganttggactccttctggatgtt 448 || | ||||| | ||||||||||||||||||| Sbjct: 210 acaaggtgca-aggtggactccttctggatgtt 179 Score = 228 bits (115), Expect = 1e-56 Identities = 195/222 (87%) Strand = Plus / Minus Query: 173 ccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccaga 232 ||||| |||||||| || | ||| | ||| |||||||||||||| || || ||||| ||| Sbjct: 225 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 166 Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 165 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 106 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 |||||||||||||| ||||| |||||||||||||| || || || || |||||||||||| Sbjct: 105 ccctccttgtcctgaatcttagccttcacattgtcaatcgtatcggaggactcaacctcc 46 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgc 394 | ||||||||||||||||||||||||||||||||| |||||| Sbjct: 45 aaggtgatggtcttgccagtgagggtcttaacgaatatctgc 4 Score = 220 bits (111), Expect = 3e-54 Identities = 224/259 (86%), Gaps = 3/259 (1%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| ||||||||||| || ||||| || || || ||||| ||||||||||||||||| Sbjct: 657 agggtggactccttctgaatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 598 Query: 257 ccagcaaagatgaggcgct-gctggtccggtgggatgccctccttgtcctggatctttgc 315 ||||| ||||| ||||||| ||||||| |||| || |||||||||||||||||||| || Sbjct: 597 ccagcgaagatnaggcgcttgctggtctggtga-ataccctccttgtcctggatcttggc 539 Query: 316 cttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgag 375 ||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| || Sbjct: 538 cttcacattgtcgatcgtgtcagaggactcaacctccaaggtgatcgtcttgccagtaag 479 Query: 376 ggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggact 435 |||||| || |||||||||||||| |||| |||||| || || | |||||| |||| | Sbjct: 478 ggtcttcacaaagatctgcataccgccccggaggcgcaggacaaggtgcag-ggtggatt 420 Query: 436 ccttctggatgttgtagtc 454 |||| |||||||||||||| Sbjct: 419 ccttttggatgttgtagtc 401
>dbj|AB089615.1| Gorilla gorilla UbC gene for polyubiquitin C, complete cds Length = 1830 Score = 230 bits (116), Expect = 3e-57 Identities = 234/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 1355 cggagcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtgcgccca 1296 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 ||||| |||||||| || |||||||| | | ||||||||| || |||||||| |||||| Sbjct: 1295 tcctccagctgctttccggcaaagatcaacctctgctggtcaggagggatgccttccttg 1236 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || |||||||||||||| ||||| |||||||||||| | ||| ||||| ||||||||| Sbjct: 1235 tcttggatctttgccttgacattctcgatggtgtcactgggctcgacctcaagggtgatg 1176 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||| ||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 1175 gtcttaccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccagg 1116 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 ||||| ||||||| ||||||||||||||||| Sbjct: 1115 tgcag-ggtggactctttctggatgttgtagtc 1084 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 1583 cggagcaccaggtgcagggtagactctttctggatgttgtagtcagacagggtgcgtcca 1524 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| | | ||||||||| || |||||||| |||||| Sbjct: 1523 tcttccagctgctttccggcaaagatcaacctctgctggtcaggagggatgccttccttg 1464 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || |||||||||||||| || || |||||||||||| | ||| ||||| ||||||||| Sbjct: 1463 tcttggatctttgccttgacgttctcgatggtgtcactgggctccacctcgagggtgatg 1404 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||| ||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 1403 gtcttaccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccagg 1344 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 ||||| ||||||| ||||||||||||||||| Sbjct: 1343 tgcag-ggtggactctttctggatgttgtagtc 1312 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 1127 cggagcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtgcgccca 1068 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| ||||||||||| | | ||||||||| || |||||||| |||||| Sbjct: 1067 tcttccagctgctttccagcaaagatcaacctctgctggtcaggagggatgccttccttg 1008 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || ||||||||||| || || || |||||||||||| | ||| ||||| ||||||||| Sbjct: 1007 tcttggatctttgctttgacgttctcgatggtgtcactgggctcgacctcgagggtgatg 948 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||| ||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 947 gtcttaccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccagg 888 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 ||||| ||||||| ||||||||||||||||| Sbjct: 887 tgcag-ggtggactctttctggatgttgtagtc 856 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 899 cggagcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtgcgccca 840 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| ||||||||||| | | ||||||||| || |||||||| |||||| Sbjct: 839 tcttccagctgctttccagcaaagatcaacctctgctggtcaggagggatgccttccttg 780 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || ||||||||||| || || || |||||||||||| | ||| ||||| ||||||||| Sbjct: 779 tcttggatctttgctttgacgttctcgatggtgtcactgggctcgacctcgagggtgatg 720 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||| ||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 719 gtcttaccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccagg 660 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 ||||| ||||||| ||||||||||||||||| Sbjct: 659 tgcag-ggtggactctttctggatgttgtagtc 628 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 671 cggagcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtgcgccca 612 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 ||||| |||||||| || |||||||| | | ||||||||| || |||||||| |||||| Sbjct: 611 tcctccagctgctttccggcaaagatcaacctctgctggtcaggagggatgccttccttg 552 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || ||||||||||| || || || |||||||||||| | ||| ||||| ||||||||| Sbjct: 551 tcttggatctttgctttgacgttctcgatggtgtcactgggctcgacctcgagggtgatg 492 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||| ||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 491 gtcttaccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccagg 432 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 ||||| ||||||| ||||||||||||||||| Sbjct: 431 tgcag-ggtggactctttctggatgttgtagtc 400 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||| ||||| || Sbjct: 1805 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcgtccatcttcc 1746 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || ||||||||||| | | ||||||||| || |||||||| |||||||| ||| Sbjct: 1745 agctgtttcccagcaaagattaacctctgctggtcaggagggatgccttccttgtcttgg 1686 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||||||||| ||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 1685 atctttgccttgacattctcgatggtgtcactgggctccacctcgagggtgatggtcttg 1626 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 ||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| |||||| Sbjct: 1625 ccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccaggtgcag- 1567 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||| ||||||||||||||||| Sbjct: 1566 ggtagactctttctggatgttgtagtc 1540 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 443 cggagcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtgcgccca 384 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 ||||| |||||||| || |||||||| | | ||||||||| || |||||||| |||||| Sbjct: 383 tcctccagctgctttccggcaaagatcaacctctgctggtcaggagggatgccttccttg 324 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || ||||||||||| || || || |||||||||||| | ||| ||||| ||||||||| Sbjct: 323 tcttggatctttgctttgacgttctcgatggtgtcactgggctcgacctcgagggtgatg 264 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||| ||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 263 gtcttaccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccagg 204 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | ||||| |||||||||||||| Sbjct: 203 tgcag-ggtagactctttctggatgttgta 175 Score = 159 bits (80), Expect = 1e-35 Identities = 181/215 (84%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| ||||| || | ||| ||||| ||| Sbjct: 215 cggagcaccaggtgcagggtagactctttctggatgttgtaatcagacagggtgcgccca 156 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || ||||| || ||||||||||| || | ||||||||| || |||||||| ||||| Sbjct: 155 tcttccagctgttttccagcaaagatcagcctctgctggtcaggagggatgccttcctta 96 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || |||||||||||||| ||||| |||||||||||| | ||| ||||| ||||||||| Sbjct: 95 tcttggatctttgccttgacattctcgatggtgtcactgggctcgacctcgagggtgatg 36 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||| || ||||| |||||||||||||| Sbjct: 35 gtcttaccagtcagagtcttcacgaagatctgcat 1
>gb|DQ216236.1| Taeniopygia guttata clone 0058P0054D08 ubiquitin C variant 1-like mRNA, complete sequence Length = 1150 Score = 228 bits (115), Expect = 1e-56 Identities = 218/252 (86%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| | || ||||||||||| || |||||||| |||||| Sbjct: 946 gactccttctggatgttgtagtcggagagggtgcggccatcttccagctgcttgccagca 887 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 ||||| || | |||||| || || || ||||||||||||||||||||||| ||||||||| Sbjct: 886 aagatcagcctctgctgatctgggggaatgccctccttgtcctggatcttggccttcaca 827 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 || || ||||||||| | |||||| ||||||||||||||||||||||| |||||||| Sbjct: 826 ttttcaatggtgtcactgggctcaacttccagggtgatggtcttgccagtcagggtcttg 767 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 |||||||||||||| |||||||||||||| || || | |||||| |||| |||||||| Sbjct: 766 acgaagatctgcatcccacccctgaggcgcaggacaaggtgcag-ggtggattccttctg 708 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 707 gatgttgtagtc 696 Score = 188 bits (95), Expect = 1e-44 Identities = 231/276 (83%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | ||| ||||| Sbjct: 514 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcagacagggtgcgc 455 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 |||||||| |||||||| ||||| || || || | ||||||||| || |||||||| ||| Sbjct: 454 ccatcctccagctgcttgccagcgaaaatcagcctctgctggtcaggagggatgccttcc 395 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| ||||| ||||| || ||||||||| | || ||||| || ||| Sbjct: 394 ttatcctggatcttggccttgacattctcaatggtgtcactgggttccacctcaagagtg 335 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| ||||| || |||||||||||||| ||||| || ||||| | |||| Sbjct: 334 atggtcttgccagtcagggttttcacgaagatctgcatcccacctctcaggcgcaacacc 275 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||||||| || ||||| ||||||||||||||||| Sbjct: 274 aggtgcagagtt-gactctttctggatgttgtagtc 240 Score = 176 bits (89), Expect = 4e-41 Identities = 216/258 (83%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| || ||||||||||| |||||||| | || ||||||||||| || |||||||| Sbjct: 724 agggtggattccttctggatgttgtagtcggagagggtgcggccatcttccagctgcttg 665 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 || |||||||| || | ||||||||| || ||||| || ||||| ||||||||||| ||| Sbjct: 664 ccggcaaagatcagcctctgctggtcaggagggataccttccttatcctggatcttggcc 605 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 ||||| || |||||||||||| | ||| ||||| || |||||||||||||| || ||| Sbjct: 604 ttcacgttctcgatggtgtcactgggctccacctcgagagtgatggtcttgccggtcagg 545 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| || ||||||||||| ||||| || ||||| ||||||| |||||| |||| || Sbjct: 544 gtcttcacaaagatctgcatcccacctctcaggcgcagcaccaggtgcag-ggtggattc 486 Query: 437 cttctggatgttgtagtc 454 |||||||||||||||||| Sbjct: 485 cttctggatgttgtagtc 468 Score = 141 bits (71), Expect = 2e-30 Identities = 163/194 (84%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 ||||| |||||||| |||||||| ||| | | || ||||| || ||||||||||||||| Sbjct: 262 gactctttctggatgttgtagtcagcccgcctacgcccatcttccagctgcttaccagca 203 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 ||||| || | ||||||||| || || ||||| ||||||||||||||||| ||||| ||| Sbjct: 202 aagatcagcctctgctggtctgggggaatgccttccttgtcctggatcttggccttgaca 143 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 || || ||||||||| | ||| ||||| ||||||||||||||||| || |||||||| Sbjct: 142 ttttcaatggtgtcactgggctccacctcaagggtgatggtcttgccggtcagggtcttc 83 Query: 383 acgaagatctgcat 396 || ||||||||||| Sbjct: 82 acaaagatctgcat 69 Score = 61.9 bits (31), Expect = 2e-06 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 398 ccacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| || || | ||||||| || ||||||||||||||||||||||| Sbjct: 979 ccacccctgaggcgcaggacaaggtgcagagtt-gactccttctggatgttgtagtc 924
>gb|BC070919.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:91487 IMAGE:7104905), complete cds Length = 1170 Score = 228 bits (115), Expect = 1e-56 Identities = 236/276 (85%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| ||||| |||||||| ||||| || | || |||||| Sbjct: 974 aggcggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcgg 915 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 914 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 855 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 854 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 795 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| ||| Sbjct: 794 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggacc 735 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| || ||||||||||||||||||||||| Sbjct: 734 aggtgcagggtt-gactccttctggatgttgtagtc 700 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| |||||||||||||| |||||||| | || |||||| Sbjct: 746 aggcggaggaccaggtgcagggttgactccttctggatgttgtagtcagagagggtgcgg 687 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 686 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 627 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 626 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 567 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| || Sbjct: 566 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggaca 507 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 506 aggtgcagggtt-gactctttctggatgttgta 475 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| || | ||| ||||| ||||| |||||||| ||||| || | || |||||| Sbjct: 518 aggcggaggacaaggtgcagggttgactctttctggatgttgtaatcagagagggtgcgg 459 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 458 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 399 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 398 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 339 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| ||| Sbjct: 338 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggacc 279 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| || ||||| ||||||||||||||||| Sbjct: 278 aggtgcagggtt-gactctttctggatgttgtagtc 244 Score = 172 bits (87), Expect = 6e-40 Identities = 185/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| ||||| |||||||| |||||||| | || |||||| Sbjct: 290 aggcggaggaccaggtgcagggttgactctttctggatgttgtagtcagagagggtgcgg 231 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 230 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 171 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 170 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 111 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||| ||||| Sbjct: 110 atggtcttgccggtcagggtcttcacgaagatttgcat 73
>ref|XM_388944.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08768.1) partial mRNA Length = 690 Score = 228 bits (115), Expect = 1e-56 Identities = 201/230 (87%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| |||||||| || | |||||| ||||||||||||||||| |||||||| | Sbjct: 455 ccaccacgaaggcggaggacgaggtggagagtcgactccttctggatgttgtagtcggag 396 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| || || || || | |||||||| || || ||| Sbjct: 395 agggtgcggccatcctcgagctgcttgccggcgaaaatcaatcgctgctgatcaggaggg 336 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| | ||||||||||||||||||||| |||||||| ||| Sbjct: 335 atgccctccttgtcctggatcttggacttcacattgtcgatggtgtcggatgactcgacc 276 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcatacc 399 || ||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 275 tcgagggtgatggtcttgcctgtgagggtcttgacgaagatttgcatacc 226 Score = 151 bits (76), Expect = 2e-33 Identities = 233/285 (81%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| || || || |||| ||| ||||| || ||||||||||| |||||||| | Sbjct: 683 ccaccacgaagacgaaggaccaggtgaagggttgattccttctggatgttgtagtcggag 624 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || || || || ||||| |||||||| || || || || | |||||||| || || ||| Sbjct: 623 agggttcgaccgtcctcgagctgcttgccggcgaaaatcaatcgctgctgatcaggaggg 564 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||||||||| | ||| || |||||||| ||||| |||||||| ||| Sbjct: 563 ataccctccttgtcctggatcttggacttgacgttgtcgatagtgtcggatgactcgacc 504 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 || ||||||||||||||||| || | |||||| ||||| || ||||||||||| | ||| Sbjct: 503 tcaagggtgatggtcttgccggtcaaggtcttgacgaaaatttgcataccaccacgaagg 444 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| || | ||| ||| | ||||||||||||||||||||||| Sbjct: 443 cggaggacgaggtggagag-tcgactccttctggatgttgtagtc 400 Score = 145 bits (73), Expect = 1e-31 Identities = 171/204 (83%) Strand = Plus / Minus Query: 193 gtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctg 252 |||||| |||||||||||||| || ||||| || | || |||||||||||||| ||||| Sbjct: 204 gtggagagtcgactccttctgaatgttgtaatcggagagggtgcggccatcctcgagctg 145 Query: 253 cttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctt 312 ||| || || || || | |||||||| || || |||||||||||||||||||| ||||| Sbjct: 144 cttgccggcgaaaatcaatcgctgctgatcaggagggatgccctccttgtcctgaatctt 85 Query: 313 tgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagt 372 | ||| || |||||||| || ||||||||||||||||| ||||| || |||||||| || Sbjct: 84 ggacttgacgttgtcgatagtatcagatgactcaacctcgagggtaatagtcttgccggt 25 Query: 373 gagggtcttaacgaagatctgcat 396 | |||||| |||||||||||||| Sbjct: 24 caaggtcttgacgaagatctgcat 1
>dbj|AB089618.1| Pongo pygmaeus UbB gene for polyubiquitin B, complete cds Length = 690 Score = 228 bits (115), Expect = 1e-56 Identities = 236/276 (85%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 674 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 615 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 614 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcaggggggatgccttct 555 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||||||| Sbjct: 554 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagggtg 495 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 494 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgtaggacc 435 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| || ||||||||||||||||||||||| Sbjct: 434 aggtgcagggtt-gactccttctggatgttgtagtc 400 Score = 202 bits (102), Expect = 7e-49 Identities = 226/267 (84%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||| |||||||||||||| |||||||| | |||||||| ||||| || Sbjct: 437 accaggtgcagggttgactccttctggatgttgtagtcagaaagagtgcgaccatcttcc 378 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| || || |||||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggaggaatgccttctttatcctgg 318 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacctccagggtgatggtcttg 258 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 257 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 199 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||| ||||||||||||||||| Sbjct: 198 ggtcgactctttctggatgttgtagtc 172 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||||||||| |||||||| |||||||| | ||||| |||||||| || Sbjct: 209 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtacggccatcttcc 150 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 ||||| ||||| || |||||||||||||| Sbjct: 29 ccagtaagggttttcacgaagatctgcat 1
>dbj|D83208.1|GPIUBIY Cavia cobaya mRNA for ubiquitin, complete cds Length = 1028 Score = 228 bits (115), Expect = 1e-56 Identities = 236/276 (85%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| |||||||||||||| |||||||| | || ||||| Sbjct: 720 aggcgcagcaccaggtgcagggtggactccttctggatgttgtagtcagagagggtgcgc 661 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||| ||||| || | ||||||||| || |||||||||||| Sbjct: 660 ccatcttccagctgcttgccagcgaagatcagcctctgctggtcaggggggatgccctcc 601 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 ||||| |||||||| ||||| ||||| || ||||||||| | ||| ||||| |||||| Sbjct: 600 ttgtcttggatcttggccttgacattctcaatggtgtcactgggctccacctcgagggtg 541 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||||||||||||||| |||||||||||||| ||||| || ||||| || ||| Sbjct: 540 atggtcttgccagtgagggtcttcacgaagatctgcatgccacctctcaggcgcaggacc 481 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| ||||||||||||||||||||||||| Sbjct: 480 aggtgcag-ggtggactccttctggatgttgtagtc 446 Score = 220 bits (111), Expect = 3e-54 Identities = 235/276 (85%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| |||||||| | || ||||| Sbjct: 948 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtcggagagggtgcgc 889 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 || || || |||||||| ||||| ||||| || | ||||||||| || |||||||||||| Sbjct: 888 ccgtcttccagctgcttgccagcgaagatcagcctctgctggtcaggggggatgccctcc 829 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 ||||| |||||||| ||||| ||||| || ||||||||| | ||| ||||| |||||| Sbjct: 828 ttgtcttggatcttggccttgacattctcaatggtgtcactgggctccacctcgagggtg 769 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||||||||||||||| |||||||||||||| ||||| || ||||| |||||| Sbjct: 768 atggtcttgccagtgagggtcttcacgaagatctgcatcccacctctcaggcgcagcacc 709 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| ||||||||||||||||||||||||| Sbjct: 708 aggtgcag-ggtggactccttctggatgttgtagtc 674 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| |||||||| | || ||||| Sbjct: 492 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtcagagagggtgcgc 433 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 || || || |||||||| ||||| ||||| || | ||||||||| || |||||||||||| Sbjct: 432 ccgtcttccagctgcttgccagcgaagatcagcctctgctggtcaggggggatgccctcc 373 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 ||||| |||||||| ||||| ||||| || ||||||||| | ||| ||||| |||||| Sbjct: 372 ttgtcttggatcttggccttgacattctcaatggtgtcactgggctctacctcgagggtg 313 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||||||||||||||| |||||||||||||| ||||| || ||||| || ||| Sbjct: 312 atggtcttgccagtgagggtcttcacgaagatctgcatgccacctctcaggcgcaggacc 253 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| ||||||||||||||||||||||||| Sbjct: 252 aggtgcag-ggtggactccttctggatgttgtagtc 218 Score = 172 bits (87), Expect = 6e-40 Identities = 185/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| |||||||| | || ||||| Sbjct: 264 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtcagagagggtgcgc 205 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 || || || |||||||| ||||| ||||| || | ||||||||| || |||||||||||| Sbjct: 204 ccgtcttccagctgcttgccagcgaagatcagcctctgctggtcaggggggatgccctcc 145 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 ||||| |||||||| ||||| ||||| || ||||||||| | ||| ||||| |||||| Sbjct: 144 ttgtcttggatcttggccttgacattctcaatggtgtcactgggctctacctcgagggtg 85 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||||||||||||||| |||||||||||||| Sbjct: 84 atggtcttgccagtgagggtctttacgaagatctgcat 47
>ref|NM_018955.2| Homo sapiens ubiquitin B (UBB), mRNA Length = 971 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 575 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 516 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 515 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 456 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 455 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 396 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 395 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 337 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 336 ggtcgactccttctggatgttgtagtc 310 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 812 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 753 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 752 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 693 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 692 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 633 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 632 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 573 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 572 aggtgcag-ggtcgactccttctggatgttgtagtc 538 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 347 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 288 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 287 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 228 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 227 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 168 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 167 ccggtaagggttttcacgaagatctgcat 139
>gb|BC038999.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:47606 IMAGE:4943285), complete cds Length = 957 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 544 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 485 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 484 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 425 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 424 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 365 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 364 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 306 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 305 ggtcgactccttctggatgttgtagtc 279 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 781 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 722 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 721 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 662 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 661 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 602 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 601 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 542 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 541 aggtgcag-ggtcgactccttctggatgttgtagtc 507 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 316 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 257 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 256 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 197 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 196 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 137 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 136 ccggtaagggttttcacgaagatctgcat 108
>gb|BT020104.1| Homo sapiens ubiquitin B mRNA, complete cds Length = 690 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 257 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 199 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 198 ggtcgactccttctggatgttgtagtc 172 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 674 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 615 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 614 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 555 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 554 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 495 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 494 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 435 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 434 aggtgcag-ggtcgactccttctggatgttgtagtc 400 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 150 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 29 ccggtaagggttttcacgaagatctgcat 1
>gb|BC046123.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:57581 IMAGE:3879581), complete cds Length = 951 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 523 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 464 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 463 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 404 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 403 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 344 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 343 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 285 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 284 ggtcgactccttctggatgttgtagtc 258 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 760 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 701 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 700 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 641 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 640 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 581 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 580 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 521 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 520 aggtgcag-ggtcgactccttctggatgttgtagtc 486 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 295 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 236 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 235 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 176 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 175 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 116 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 115 ccggtaagggttttcacgaagatctgcat 87
>gb|BC031027.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:32826 IMAGE:4715377), complete cds Length = 919 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 535 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 476 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 475 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 416 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 415 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 356 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 355 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 297 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 296 ggtcgactccttctggatgttgtagtc 270 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 772 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 713 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 712 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 653 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 652 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 593 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 592 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 533 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 532 aggtgcag-ggtcgactccttctggatgttgtagtc 498 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 307 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 248 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 247 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 188 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 187 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 128 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 127 ccggtaagggttttcacgaagatctgcat 99
>gb|BC000379.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:8385 IMAGE:2820408), complete cds Length = 989 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 575 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 516 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 515 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 456 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 455 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 396 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 395 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 337 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 336 ggtcgactccttctggatgttgtagtc 310 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 812 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 753 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 752 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 693 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 692 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 633 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 632 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 573 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 572 aggtgcag-ggtcgactccttctggatgttgtagtc 538 Score = 170 bits (86), Expect = 3e-39 Identities = 178/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| ||||| || || Sbjct: 347 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccgtcttcc 288 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 287 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 228 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 227 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 168 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 167 ccggtaagggttttcacgaagatctgcat 139
>gb|BC026301.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:24729 IMAGE:4280629), complete cds Length = 957 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 533 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 474 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 473 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 414 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 413 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 354 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 353 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 295 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 294 ggtcgactccttctggatgttgtagtc 268 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 770 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 711 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 710 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 651 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 650 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 591 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 590 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 531 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 530 aggtgcag-ggtcgactccttctggatgttgtagtc 496 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 305 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 246 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 245 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 186 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 185 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 126 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 125 ccggtaagggttttcacgaagatctgcat 97
>gb|AY478418.1| Clusia minor polyubiquitin (Ubq1) mRNA, partial cds Length = 750 Score = 226 bits (114), Expect = 5e-56 Identities = 241/283 (85%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 ||||||||| || ||||| |||||||||||||| ||||||||||| || || ||||| || Sbjct: 314 gccaccacgtagacggagaaccaagtggagggtggactccttctgaatgttatagtcagc 255 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| || ||||||||||| |||||||| ||||| || ||||| | |||||||||||| || Sbjct: 254 cagcgtacggccatcctccagctgcttgccagcgaatatgagcctctgctggtccggggg 195 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 || |||||||||||||||||||| ||||| || ||||| || ||||| || ||| || Sbjct: 194 aatcccctccttgtcctggatcttagccttgacgttgtcaattgtgtcggagctctccac 135 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||| |||||| ||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 134 ctccaaggtgatagtcttgccagtgagggtcttaacaaagatctgcatgccacccctcaa 75 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgta 451 | |||||||| ||| || |||||||||||||||||||||| Sbjct: 74 cctgagcaccaagtggag-ggtggactccttctggatgttgta 33 Score = 216 bits (109), Expect = 5e-53 Identities = 242/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 ||||||||||||||| || ||||| |||||||| || ||||||||||| |||||||| || Sbjct: 542 gccaccacggaggcgaaggaccaaatggagggtggattccttctggatgttgtagtctgc 483 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||||| || ||||||||||||||||| ||||||||||| | | |||||||||||| || Sbjct: 482 aagagtacgcccatcctcaagctgcttgccagcaaagatcaacctctgctggtccggggg 423 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||||| || |||||||| ||||| |||||||| |||||||| || |||||| Sbjct: 422 aatgccctccttatcttggatcttagccttgacattgtcaatggtgtccgagctctcaac 363 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||| |||||||||||||| ||||| |||||||| || ||||||||||| ||||| | || Sbjct: 362 ctcaagggtgatggtctttccagtaagggtcttcacaaagatctgcatgccaccacgtag 303 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| |||| ||| || ||||||||||||| ||||| ||||| Sbjct: 302 acggagaaccaagtggag-ggtggactccttctgaatgttatagtc 258 Score = 67.9 bits (34), Expect = 3e-08 Identities = 60/69 (86%) Strand = Plus / Minus Query: 184 gagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatc 243 |||||||||||||||||| |||||||||||||| ||||| || || || || ||||| || Sbjct: 71 gagcaccaagtggagggtggactccttctggatgttgtaatcagcaagggtacggccgtc 12 Query: 244 ctcaagctg 252 |||||||| Sbjct: 11 ttcaagctg 3 Score = 63.9 bits (32), Expect = 4e-07 Identities = 92/111 (82%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 209 ttctggatnttgtagtccgccagagtgcggccatcctcaagctgc-ttaccagcaaagat 267 |||||||| |||||||| || ||||| || ||||| ||||||||| || | ||||| || Sbjct: 733 ttctggatgttgtagtctgcaagagtacgcccatcntcaagctgctttncntgcaaaaat 674 Query: 268 gaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcctt 318 | ||||| ||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 673 canccgctgttggtctgg-gggatcccctccttgtcctggatcttggcctt 624
>gb|BC021067.1| Homo sapiens cDNA clone IMAGE:3510175, **** WARNING: chimeric clone **** Length = 4562 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 4148 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 4089 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 4088 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 4029 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 4028 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 3969 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 3968 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 3910 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 3909 ggtcgactccttctggatgttgtagtc 3883 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 4385 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 4326 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 4325 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 4266 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 4265 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 4206 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 4205 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 4146 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 4145 aggtgcag-ggtcgactccttctggatgttgtagtc 4111 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 3920 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 3861 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 3860 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 3801 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 3800 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 3741 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 3740 ccggtaagggttttcacgaagatctgcat 3712
>emb|CR620731.1| full-length cDNA clone CS0DF038YI22 of Fetal brain of Homo sapiens (human) Length = 940 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 549 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 490 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 489 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 430 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 429 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 370 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 369 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 311 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 310 ggtcgactccttctggatgttgtagtc 284 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 786 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 727 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 726 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 667 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 666 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 607 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 606 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 547 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 546 aggtgcag-ggtcgactccttctggatgttgtagtc 512 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 321 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 262 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 261 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 202 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 201 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 142 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 141 ccggtaagggttttcacgaagatctgcat 113
>emb|CR607481.1| full-length cDNA clone CS0DN001YF11 of Adult brain of Homo sapiens (human) Length = 917 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 523 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 464 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 463 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 404 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 403 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 344 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 343 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 285 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 284 ggtcgactccttctggatgttgtagtc 258 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 760 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 701 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 700 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 641 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 640 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 581 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 580 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 521 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 520 aggtgcag-ggtcgactccttctggatgttgtagtc 486 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 295 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 236 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 235 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 176 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 175 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 116 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 115 ccggtaagggttttcacgaagatctgcat 87
>emb|CR589965.1| full-length cDNA clone CS0DF011YA08 of Fetal brain of Homo sapiens (human) Length = 908 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 515 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 456 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 455 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 396 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 395 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 336 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 335 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 277 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 276 ggtcgactccttctggatgttgtagtc 250 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 752 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 693 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 692 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 633 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 632 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 573 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 572 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 513 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 512 aggtgcag-ggtcgactccttctggatgttgtagtc 478 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 287 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 228 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 227 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 168 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 167 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 108 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 107 ccggtaagggttttcacgaagatctgcat 79
>gb|AC093484.2| Homo sapiens chromosome , clone RP11-138I1, complete sequence Length = 170944 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 103133 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 103074 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 103073 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 103014 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 103013 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 102954 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 102953 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 102895 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 102894 ggtcgactccttctggatgttgtagtc 102868 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 103370 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 103311 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 103310 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 103251 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 103250 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 103191 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 103190 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 103131 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 103130 aggtgcag-ggtcgactccttctggatgttgtagtc 103096 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 102905 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 102846 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 102845 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 102786 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 102785 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 102726 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 102725 ccggtaagggttttcacgaagatctgcat 102697
>ref|NM_001009117.1| Pan troglodytes ubiquitin B (UBB), mRNA Length = 690 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 ||||| |||||||| |||||||||||||||||||| || || || || |||| ||||| Sbjct: 257 ccagtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccagatgcag- 199 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 198 ggtcgactccttctggatgttgtagtc 172 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 674 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 615 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 614 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttct 555 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 554 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 495 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 494 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 435 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 434 aggtgcag-ggtcgactccttctggatgttgtagtc 400 Score = 184 bits (93), Expect = 2e-43 Identities = 173/200 (86%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 |||||||||||||||||||| |||||||| | ||||| |||||||| || |||||||| Sbjct: 200 agggtcgactccttctggatgttgtagtcagaaagagtacggccatcttccagctgcttg 141 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 || ||||||||||| | ||||||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 140 cctgcaaagatgagcctctgctggtcgggagggatgccttccttatcctggatcttggcc 81 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||| |||||||||||| | ||| ||||| ||||||||||||||||| || ||| Sbjct: 80 ttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttgccggtaagg 21 Query: 377 gtcttaacgaagatctgcat 396 || || |||||||||||||| Sbjct: 20 gttttcacgaagatctgcat 1
>gb|AY891423.1| Synthetic construct Homo sapiens clone FLH017070.01L ubiquitin B (UBB) mRNA, partial cds Length = 690 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 257 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 199 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 198 ggtcgactccttctggatgttgtagtc 172 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 674 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 615 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 614 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 555 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 554 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 495 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 494 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 435 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 434 aggtgcag-ggtcgactccttctggatgttgtagtc 400 Score = 170 bits (86), Expect = 3e-39 Identities = 178/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| ||||| || || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccgtcttcc 150 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 29 ccggtaagggttttcacgaagatctgcat 1
>gb|AY888785.1| Synthetic construct Homo sapiens clone FLH017074.01X ubiquitin B (UBB) mRNA, complete cds Length = 690 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 257 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 199 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 198 ggtcgactccttctggatgttgtagtc 172 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 674 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 615 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 614 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 555 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 554 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 495 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 494 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 435 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 434 aggtgcag-ggtcgactccttctggatgttgtagtc 400 Score = 170 bits (86), Expect = 3e-39 Identities = 178/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| ||||| || || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccgtcttcc 150 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 29 ccggtaagggttttcacgaagatctgcat 1
>gb|AY888190.1| Synthetic construct Homo sapiens clone FLH021788.01X ubiquitin B (UBB) mRNA, complete cds Length = 690 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 257 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 199 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 198 ggtcgactccttctggatgttgtagtc 172 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 674 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 615 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 614 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 555 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 554 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 495 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 494 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 435 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 434 aggtgcag-ggtcgactccttctggatgttgtagtc 400 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 150 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 29 ccggtaagggttttcacgaagatctgcat 1
>dbj|AB089619.1| Pan troglodytes UbB gene for polyubiquitin B, complete cds Length = 690 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 ||||| |||||||| |||||||||||||||||||| || || || || |||| ||||| Sbjct: 257 ccagtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccagatgcag- 199 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 198 ggtcgactccttctggatgttgtagtc 172 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 674 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 615 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 614 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttct 555 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 554 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 495 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 494 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 435 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 434 aggtgcag-ggtcgactccttctggatgttgtagtc 400 Score = 184 bits (93), Expect = 2e-43 Identities = 173/200 (86%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 |||||||||||||||||||| |||||||| | ||||| |||||||| || |||||||| Sbjct: 200 agggtcgactccttctggatgttgtagtcagaaagagtacggccatcttccagctgcttg 141 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 || ||||||||||| | ||||||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 140 cctgcaaagatgagcctctgctggtcgggagggatgccttccttatcctggatcttggcc 81 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||| |||||||||||| | ||| ||||| ||||||||||||||||| || ||| Sbjct: 80 ttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttgccggtaagg 21 Query: 377 gtcttaacgaagatctgcat 396 || || |||||||||||||| Sbjct: 20 gttttcacgaagatctgcat 1
>dbj|AB089617.1| Homo sapiens UbB gene for polyubiquitin B, complete cds Length = 690 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 257 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 199 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 198 ggtcgactccttctggatgttgtagtc 172 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 674 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 615 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 614 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 555 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 554 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 495 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 494 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 435 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 434 aggtgcag-ggtcgactccttctggatgttgtagtc 400 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 150 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 29 ccggtaagggttttcacgaagatctgcat 1
>dbj|AK129498.1| Homo sapiens cDNA FLJ25987 fis, clone CBR05488, highly similar to Homo sapiens ubiquitin B (UBB) Length = 928 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 533 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 474 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 473 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 414 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 413 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 354 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 353 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 295 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 294 ggtcgactccttctggatgttgtagtc 268 Score = 204 bits (103), Expect = 2e-49 Identities = 233/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 770 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 711 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 710 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 651 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||| | ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 650 ttatcttggatcatggccttcacattttcgatggtgtcactgggctccacctccagagtg 591 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 590 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 531 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 530 aggtgcag-ggtcgactccttctggatgttgtagtc 496 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 305 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 246 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 245 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 186 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 185 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 126 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 125 ccggtaagggttttcacgaagatctgcat 97
>gb|BC015127.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:24232 IMAGE:3929901), complete cds Length = 965 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 537 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 478 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 477 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 418 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 417 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 358 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 357 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 299 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 298 ggtcgactccttctggatgttgtagtc 272 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 774 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 715 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 714 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 655 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 654 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 595 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 594 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 535 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 534 aggtgcag-ggtcgactccttctggatgttgtagtc 500 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 309 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 250 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 249 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 190 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 189 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 130 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 129 ccggtaagggttttcacgaagatctgcat 101
>gb|BC009301.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:16688 IMAGE:4126622), complete cds Length = 943 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 521 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 462 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 461 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 402 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 401 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 342 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 341 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 283 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 282 ggtcgactccttctggatgttgtagtc 256 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 758 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 699 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 698 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 639 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 638 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 579 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 578 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 519 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 518 aggtgcag-ggtcgactccttctggatgttgtagtc 484 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 293 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 234 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 233 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 174 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 173 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 114 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 113 ccggtaagggttttcacgaagatctgcat 85
>emb|AL356460.3|HS84M10 Homo sapiens chromosome 17 from PAC 84M10 map17p11.2 region D17S842-D17S953, complete sequence Length = 161943 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 7153 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 7212 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 7213 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 7272 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 7273 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 7332 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 7333 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 7391 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 7392 ggtcgactccttctggatgttgtagtc 7418 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Plus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||||||||| |||||||| |||||||| | ||||||||| Sbjct: 6916 aggcgcaggaccaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcgg 6975 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 6976 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 7035 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||| ||| Sbjct: 7036 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagagtg 7095 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 7096 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 7155 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 7156 aggtgcag-ggtcgactccttctggatgttgtagtc 7190 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Plus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 7381 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 7440 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 7441 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 7500 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 7501 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 7560 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 7561 ccggtaagggttttcacgaagatctgcat 7589
>emb|X04803.2|HSYUBG1 Homo sapiens ubiquitin gene Length = 3107 Score = 226 bits (114), Expect = 5e-56 Identities = 229/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| || Sbjct: 2519 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 2460 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || |||||||| || || |||||| Sbjct: 2459 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 2400 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||||||| Sbjct: 2399 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 2340 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct: 2339 ccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggaccaggtgcag- 2281 Query: 428 nttggactccttctggatgttgtagtc 454 | ||||||||||||||||||||||| Sbjct: 2280 ggtcgactccttctggatgttgtagtc 2254 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| |||||||||||||||||||| |||||||| | ||||||||| Sbjct: 2756 aggcgcaggaccaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcgg 2697 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 2696 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttct 2637 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| || ||||| ||| Sbjct: 2636 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacttccagagtg 2577 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || || || || ||| Sbjct: 2576 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcagacgcaggacc 2517 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 2516 aggtgcag-ggtcgactccttctggatgttgtagtc 2482 Score = 178 bits (90), Expect = 1e-41 Identities = 179/209 (85%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| |||||||||||||||||||| |||||||| | ||||| |||||||| || Sbjct: 2291 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 2232 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 2231 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 2172 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 2171 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 2112 Query: 368 ccagtgagggtcttaacgaagatctgcat 396 || || ||||| || |||||||||||||| Sbjct: 2111 ccggtaagggttttcacgaagatctgcat 2083
>gb|DQ216252.1| Taeniopygia guttata clone 0058P0005E02 ubiquitin C variant 12-like mRNA, complete sequence Length = 1378 Score = 224 bits (113), Expect = 2e-55 Identities = 222/258 (86%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| || ||||||||||| |||||||| | || ||| || |||||||| ||||||||| Sbjct: 952 agggtggattccttctggatgttgtagtcggacaaagtacgaccatcctccagctgctta 893 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| || || || | ||||||||| ||||| ||||| ||||||||||||||||| ||| Sbjct: 892 ccagcgaaaatcagcctctgctggtctggtggaatgccttccttgtcctggatcttggcc 833 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||| || ||||||||| | ||| ||||| || |||||||||||||| || ||| Sbjct: 832 ttcacattttcaatggtgtcactgggctccacctcaagagtgatggtcttgccggtcagg 773 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| |||||||||||||| |||||||||||||| ||||||| ||||||| || ||||| Sbjct: 772 gtcttgacgaagatctgcatcccacccctgaggcgcagcaccaggtgcagagtt-gactc 714 Query: 437 cttctggatgttgtagtc 454 ||||||||||||||||| Sbjct: 713 tttctggatgttgtagtc 696 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| || ||||||||||| |||||||| | ||| ||||| Sbjct: 515 gaggcgcagcaccaggtgcagggtggattccttctggatattgtagtctgacagggtgcg 456 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||||||||||||||| || | ||||| ||| || || || || || Sbjct: 455 cccatcttccagctgcttaccagcaaagatcagcctctgcttgtcaggaggaataccttc 396 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| ||||| |||||||||||| | ||| ||||| ||||| Sbjct: 395 cttgtcctggatcttggccttgacattctcgatggtgtcactgggctccacctcaagggt 336 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 335 gatggtcttgccggtcagggtcttcacaaagatctgcatcccacccctgaggcgcagcac 276 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||| ||| || ||||| ||||||||||||||||| Sbjct: 275 caggtggagagtt-gactctttctggatgttgtagtc 240 Score = 216 bits (109), Expect = 5e-53 Identities = 242/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| ||||||| ||| || || |||||||||||||| |||||||| | Sbjct: 1208 gccacccctgaggcgcagcaccaggtgcagagttgactccttctggatgttgtagtcgga 1149 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||| ||||| || |||||||| ||||| || || || | ||||||||| || || Sbjct: 1148 gagggtgcgcccatcttccagctgcttgccagcgaaaatcagcctctgctggtcaggagg 1089 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||| || ||||||||||||||||| ||||| ||||| |||||||||||| | |||||| Sbjct: 1088 gataccttccttgtcctggatcttggccttgacattctcgatggtgtcactgggctcaac 1029 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1028 ttccagggtgatggtcttgccagtcagggtcttcacgaagatctgcatcccacccctgag 969 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || || | |||||| |||| |||||||||||||||||||| Sbjct: 968 gcgcaggacaaggtgcag-ggtggattccttctggatgttgtagtc 924 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| || || ||||| |||||||| |||||||| | || ||||| Sbjct: 743 gaggcgcagcaccaggtgcagagttgactctttctggatgttgtagtcggagagggtgcg 684 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||||||||||||||| || | ||||||||| || || ||||| || Sbjct: 683 cccatcttccagctgcttaccagcaaagatcagcctctgctggtctgggggaatgccttc 624 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || || |||||||||||| | |||||| |||||||| Sbjct: 623 cttgtcctggatcttggccttgacgttctcgatggtgtcactgggctcaacttccagggt 564 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||||| Sbjct: 563 gatggtcttgccggtcagggtcttgacgaagatctgcatcccacctctgaggcgcagcac 504 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| |||| ||||||||||| |||||||| Sbjct: 503 caggtgcag-ggtggattccttctggatattgtagtc 468 Score = 182 bits (92), Expect = 7e-43 Identities = 187/219 (85%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| |||||| || ||||| |||||||| |||||||| | || ||||| Sbjct: 287 gaggcgcagcaccaggtggagagttgactctttctggatgttgtagtcggagagggtgcg 228 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||||| |||||||| ||||||||||| || | ||||||||| || || |||||||| Sbjct: 227 cccatcctccagctgcttgccagcaaagatcagcctctgctggtctgggggaatgccctc 168 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| ||||| || ||||||||| | ||| ||||| ||||| Sbjct: 167 cttgtcctggatcttggccttgacattttcaatggtgtcactgggctccacctcaagggt 108 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||||||| |||||||| || ||||||||||| Sbjct: 107 gatggtcttgccagtcagggtcttcacaaagatctgcat 69
>gb|DQ216241.1| Taeniopygia guttata clone 0058P0057E02 ubiquitin C variant 2-like mRNA, complete sequence Length = 1373 Score = 224 bits (113), Expect = 2e-55 Identities = 222/258 (86%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| || ||||||||||| |||||||| | || ||||| ||||| || |||||||| Sbjct: 952 agggtggattccttctggatgttgtagtcggagagggtgcgcccatcttccagctgcttg 893 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||||||||| || | ||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 892 ccagcaaagatcagcctctgctggtcaggagggatgccctccttgtcctggatcttggcc 833 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 || ||||| |||||||||||| | ||| ||||| || ||||||||||||||||| ||| Sbjct: 832 ttgacattctcgatggtgtcactgggctccacctcgagagtgatggtcttgccagtcagg 773 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| || ||||||||||| |||||||||||||| || || | ||||||| || ||||| Sbjct: 772 gtcttcacaaagatctgcatcccacccctgaggcgcaggacaaggtgcagagtt-gactc 714 Query: 437 cttctggatgttgtagtc 454 |||||||||||||||||| Sbjct: 713 cttctggatgttgtagtc 696 Score = 204 bits (103), Expect = 2e-49 Identities = 215/252 (85%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| | ||| ||||| ||||| || |||||||| |||||| Sbjct: 718 gactccttctggatgttgtagtcagacagggtgcgcccatcttccagctgcttgccagca 659 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 ||||| || | ||||||||| || ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 658 aagatcagcctctgctggtcaggagggataccttccttatcctggatcttggccttgaca 599 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 || || ||||||||| | |||||| |||||||||||||||||||| || |||||||| Sbjct: 598 ttctcaatggtgtcactgggctcaacttccagggtgatggtcttgccggtcagggtcttg 539 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 |||||||||||||| ||||| || ||||| ||||||| |||||| |||| |||||||| Sbjct: 538 acgaagatctgcatcccacctctcaggcgcagcaccaggtgcag-ggtggattccttctg 480 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 479 gatgttgtagtc 468 Score = 204 bits (103), Expect = 2e-49 Identities = 233/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | ||| ||||| Sbjct: 514 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtctgacagggtgcgc 455 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || ||||| || ||| Sbjct: 454 ccatcttccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttcc 395 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| || ||| Sbjct: 394 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcgagagtg 335 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || ||||| || ||||| |||||||| ||||| || ||||| |||||| Sbjct: 334 atggtcttgccggtcagggttttcacgaaaatctgcatcccacctctcaggcgcagcacc 275 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||||||| || ||||| ||||||||||||||||| Sbjct: 274 aggtgcagagtt-gactctttctggatgttgtagtc 240 Score = 180 bits (91), Expect = 3e-42 Identities = 186/218 (85%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| || || ||||| |||||||| |||||||| | || |||||| Sbjct: 286 aggcgcagcaccaggtgcagagttgactctttctggatgttgtagtcagagagggtgcgg 227 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||||||||||||||| || | ||||||||| || || ||||||||| Sbjct: 226 ccatcttccagctgcttaccagcaaagatcagcctctgctggtctgggggaatgccctcc 167 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| |||||| Sbjct: 166 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcaagggtg 107 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| || ||||||||||| Sbjct: 106 atggtcttgccggtcagggtcttcacaaagatctgcat 69 Score = 167 bits (84), Expect = 4e-38 Identities = 215/258 (83%), Gaps = 5/258 (1%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| || ||||||||||| |||||||| | || ||||| |||||||| |||||| Sbjct: 1176 agggtggattccttctggatgttgtagtcggagagggtgcgcccatcctccagctgc--- 1120 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 |||||||||| || | ||||||||| || || ||||| ||||||||||||||||| ||| Sbjct: 1119 -cagcaaagatcagcctctgctggtctgggggaatgccttccttgtcctggatcttggcc 1061 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 || ||||| |||||||||||| | ||| ||||| || ||||||||| ||||||| ||| Sbjct: 1060 ttgacattctcgatggtgtcactgggctccacctcgagagtgatggtcctgccagtcagg 1001 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| || ||||||||||| |||||||||||||| || || | |||||| |||| || Sbjct: 1000 gtcttcacaaagatctgcatcccacccctgaggcgcaggacaaggtgcag-ggtggattc 942 Query: 437 cttctggatgttgtagtc 454 |||||||||||||||||| Sbjct: 941 cttctggatgttgtagtc 924 Score = 46.1 bits (23), Expect = 0.099 Identities = 49/57 (85%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 398 ccacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| || || | |||||| |||| |||||||||||||||||||| Sbjct: 1203 ccacccctgaggcgcaggacaaggtgcag-ggtggattccttctggatgttgtagtc 1148
>gb|DQ216239.1| Taeniopygia guttata clone 0058P0040D01 ubiquitin C variant 2-like mRNA, complete sequence Length = 1376 Score = 224 bits (113), Expect = 2e-55 Identities = 222/258 (86%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| || ||||||||||| |||||||| | || ||||| ||||| || |||||||| Sbjct: 952 agggtggattccttctggatgttgtagtcggagagggtgcgcccatcttccagctgcttg 893 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||||||||| || | ||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 892 ccagcaaagatcagcctctgctggtcaggagggatgccctccttgtcctggatcttggcc 833 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 || ||||| |||||||||||| | ||| ||||| || ||||||||||||||||| ||| Sbjct: 832 ttgacattctcgatggtgtcactgggctccacctcgagagtgatggtcttgccagtcagg 773 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| || ||||||||||| |||||||||||||| || || | ||||||| || ||||| Sbjct: 772 gtcttcacaaagatctgcatcccacccctgaggcgcaggacaaggtgcagagtt-gactc 714 Query: 437 cttctggatgttgtagtc 454 |||||||||||||||||| Sbjct: 713 cttctggatgttgtagtc 696 Score = 204 bits (103), Expect = 2e-49 Identities = 215/252 (85%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 |||||||||||||| |||||||| | ||| ||||| ||||| || |||||||| |||||| Sbjct: 718 gactccttctggatgttgtagtcagacagggtgcgcccatcttccagctgcttgccagca 659 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 ||||| || | ||||||||| || ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 658 aagatcagcctctgctggtcaggagggataccttccttatcctggatcttggccttgaca 599 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 || || ||||||||| | |||||| |||||||||||||||||||| || |||||||| Sbjct: 598 ttctcaatggtgtcactgggctcaacttccagggtgatggtcttgccggtcagggtcttg 539 Query: 383 acgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactccttctg 442 |||||||||||||| ||||| || ||||| ||||||| |||||| |||| |||||||| Sbjct: 538 acgaagatctgcatcccacctctcaggcgcagcaccaggtgcag-ggtggattccttctg 480 Query: 443 gatgttgtagtc 454 |||||||||||| Sbjct: 479 gatgttgtagtc 468 Score = 204 bits (103), Expect = 2e-49 Identities = 233/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | ||| ||||| Sbjct: 514 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtctgacagggtgcgc 455 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || ||||| || ||| Sbjct: 454 ccatcttccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttcc 395 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| || ||| Sbjct: 394 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcgagagtg 335 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || ||||| || ||||| |||||||| ||||| || ||||| |||||| Sbjct: 334 atggtcttgccggtcagggttttcacgaaaatctgcatcccacctctcaggcgcagcacc 275 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||||||| || ||||| ||||||||||||||||| Sbjct: 274 aggtgcagagtt-gactctttctggatgttgtagtc 240 Score = 180 bits (91), Expect = 3e-42 Identities = 186/218 (85%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| || || ||||| |||||||| |||||||| | || |||||| Sbjct: 286 aggcgcagcaccaggtgcagagttgactctttctggatgttgtagtcagagagggtgcgg 227 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||||||||||||||| || | ||||||||| || || ||||||||| Sbjct: 226 ccatcttccagctgcttaccagcaaagatcagcctctgctggtctgggggaatgccctcc 167 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| |||||| Sbjct: 166 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcaagggtg 107 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| || ||||||||||| Sbjct: 106 atggtcttgccggtcagggtcttcacaaagatctgcat 69 Score = 167 bits (84), Expect = 4e-38 Identities = 215/258 (83%), Gaps = 5/258 (1%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| || ||||||||||| |||||||| | || ||||| |||||||| |||||| Sbjct: 1176 agggtggattccttctggatgttgtagtcggagagggtgcgcccatcctccagctgc--- 1120 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 |||||||||| || | ||||||||| || || ||||| ||||||||||||||||| ||| Sbjct: 1119 -cagcaaagatcagcctctgctggtctgggggaatgccttccttgtcctggatcttggcc 1061 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 || ||||| |||||||||||| | ||| ||||| || ||||||||| ||||||| ||| Sbjct: 1060 ttgacattctcgatggtgtcactgggctccacctcgagagtgatggtcctgccagtcagg 1001 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| || ||||||||||| |||||||||||||| || || | |||||| |||| || Sbjct: 1000 gtcttcacaaagatctgcatcccacccctgaggcgcaggacaaggtgcag-ggtggattc 942 Query: 437 cttctggatgttgtagtc 454 |||||||||||||||||| Sbjct: 941 cttctggatgttgtagtc 924 Score = 46.1 bits (23), Expect = 0.099 Identities = 49/57 (85%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 398 ccacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| || || | |||||| |||| |||||||||||||||||||| Sbjct: 1203 ccacccctgaggcgcaggacaaggtgcag-ggtggattccttctggatgttgtagtc 1148
>gb|DQ216233.1| Taeniopygia guttata clone 0063P0008C04 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| ||||||| ||| || || |||||||||||||| |||||||| | Sbjct: 980 gccacccctgaggcgcagcaccaggtgcagagttgactccttctggatgttgtagtcgga 921 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||| ||||| || |||||||| ||||| || || || | ||||||||| || || Sbjct: 920 cagggtgcgcccatcttccagctgcttgccagcgaaaatcagcctctgctggtctggggg 861 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||| ||||||||||||||||| ||||||||||| |||||||||||| | |||||| Sbjct: 860 aatgccttccttgtcctggatcttggccttcacattctcgatggtgtcactgggctcaac 801 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 |||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 800 ttccaaggtgatggtcttgccagtcagggtcttcacgaagatctgcatcccacccctgag 741 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || || | |||||| |||| |||||||||||||||||||| Sbjct: 740 gcgcaggacaaggtgcag-ggtggattccttctggatgttgtagtc 696 Score = 220 bits (111), Expect = 3e-54 Identities = 235/276 (85%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| ||||| || ||||||||||| |||||||| | ||| ||||| Sbjct: 514 aggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcagacagggtgcgc 455 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || ||||| || ||| Sbjct: 454 ccatcttccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttcc 395 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| |||||||||||| | ||| ||||| || ||| Sbjct: 394 ttgtcctggatcttggccttcacattctcgatggtgtcactgggctccacctcgagagtg 335 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || ||||| || |||||||||||||| ||||| || ||||| |||||| Sbjct: 334 atggtcttgccggtcagggttttcacgaagatctgcatcccacctctcaggcgcagcacc 275 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | ||||||| || ||||| ||||||||||||||||| Sbjct: 274 aggtgcagagtt-gactctttctggatgttgtagtc 240 Score = 216 bits (109), Expect = 5e-53 Identities = 221/258 (85%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| || ||||||||||| |||||||| | || ||||| |||||||| || |||||| Sbjct: 724 agggtggattccttctggatgttgtagtcagagagggtgcgcccatcctccagttgctta 665 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||||||||| || | ||||||||| || ||||| || ||||||||||||||||| ||| Sbjct: 664 ccagcaaagatcagcctctgctggtcaggagggataccttccttgtcctggatcttggcc 605 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||| || ||||||||| | |||||| ||||||||||||||||||||||| ||| Sbjct: 604 ttcacattttcaatggtgtcactgggctcaacttccagggtgatggtcttgccagtcagg 545 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| || ||||||||||| ||||| || ||||| ||||||| |||||| |||| || Sbjct: 544 gtcttcacaaagatctgcatcccacctctcaggcgcagcaccaggtgcag-ggtggattc 486 Query: 437 cttctggatgttgtagtc 454 |||||||||||||||||| Sbjct: 485 cttctggatgttgtagtc 468 Score = 172 bits (87), Expect = 6e-40 Identities = 185/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| ||||||| ||| || || ||||| |||||||| |||||||| | || ||||| Sbjct: 286 aggcgcagcaccaggtgcagagttgactctttctggatgttgtagtcggagagggtgcgc 227 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| ||||||||||| || | ||||||||| || || ||||||||| Sbjct: 226 ccatcttccagctgcttgccagcaaagatcagcctctgctggtctgggggaatgccctcc 167 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 |||||||||||||| ||||||||||| || ||||||||| | ||| ||||| |||||| Sbjct: 166 ttgtcctggatcttggccttcacattttcaatggtgtcactgggctccacctcaagggtg 107 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||| |||||||| || ||||||||||| Sbjct: 106 atggtcttgccagtcagggtcttcacaaagatctgcat 69
>gb|BT016552.1| Zea mays clone Contig385 mRNA sequence Length = 700 Score = 224 bits (113), Expect = 2e-55 Identities = 199/228 (87%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| |||||||||||||||| ||||||||| ||||||||||| || |||||||| || Sbjct: 296 gccaccgcggaggcggagcaccaggtggagggtggactccttctgaatgttgtagtcggc 237 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||| || ||||| |||||||| || || |||||||| |||||||||||||| || Sbjct: 236 gagggtgcgaccgtcctcgagctgcttgccggcgaagatgagccgctgctggtccggggg 177 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 176 gatgccctccttgtcctggatcttggccttcacattgtcaatggtgtcggaggactccac 117 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||||||||| || || || ||||| || ||||||||||| Sbjct: 116 ctccaaagtgatggtcttccccgtcagagtcttcacaaagatctgcat 69 Score = 46.1 bits (23), Expect = 0.099 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| || | |||||||||||| ||||||||||| Sbjct: 287 gaggcggagcaccaggtggagggt-ggactccttctgaatgttgtagtc 240
>gb|BT017442.1| Zea mays clone EL01N0405B08.c mRNA sequence Length = 805 Score = 224 bits (113), Expect = 2e-55 Identities = 199/228 (87%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 318 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggc 259 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || |||||||| ||||| |||||||| || || ||||| || |||||||||||||| || Sbjct: 258 gagggtgcggccgtcctcgagctgcttgccggcgaagattagccgctgctggtccggcgg 199 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||| ||||| |||||||| |||||||||||||| || ||||| || Sbjct: 198 gatgccctccttgtcctgtatcttggccttcacgttgtcgatggtgtccgaggactccac 139 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||| || || || || |||||||| |||||||||||||| Sbjct: 138 ctccaacgtgatcgttttccccgtcagggtcttcacgaagatctgcat 91 Score = 54.0 bits (27), Expect = 4e-04 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| || | |||||||||||||||||||||||| Sbjct: 309 gaggcggagcaccaggtggagggt-ggactccttctggatgttgtagtc 262
>gb|BC019850.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:29922 IMAGE:5123849), complete cds Length = 1146 Score = 224 bits (113), Expect = 2e-55 Identities = 231/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 966 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 907 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 906 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 847 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||| Sbjct: 846 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccagggtgatg 787 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 786 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 727 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 726 tgcagggtt-gactccttctggatgttgta 698 Score = 222 bits (112), Expect = 8e-55 Identities = 233/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 741 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 682 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 681 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 622 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 621 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 562 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 561 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 502 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || |||||||||||||||||||| Sbjct: 501 aggtgcagggtt-gactccttctggatgttgta 470 Score = 208 bits (105), Expect = 1e-50 Identities = 229/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| |||||||||||||| ||||| || | || ||||||||| Sbjct: 510 cggaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcggcca 451 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | |||||||| || ||||||||||| || Sbjct: 450 tcttccagctgcttgccggcaaagatcagcctatgctggtcaggggggatgccctcttta 391 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||| Sbjct: 390 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccagggtgatg 331 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| |||||||| || ||||| |||| | Sbjct: 330 gtcttgccggtcagggtcttcacgaagatctgcatgccacccctcagacggaggaccagg 271 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || ||||| |||||||||||||| Sbjct: 270 tgcagggtt-gactctttctggatgttgta 242 Score = 159 bits (80), Expect = 1e-35 Identities = 181/215 (84%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 282 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 223 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 222 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 163 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||| ||||||||| Sbjct: 162 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatg 103 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||| || |||||||| |||||||||||||| Sbjct: 102 gtcttgccggtcagggtcttcacgaagatctgcat 68
>ref|XR_004580.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 746 Score = 224 bits (113), Expect = 2e-55 Identities = 231/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 546 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 487 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 486 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 427 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 426 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 367 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| |||||||| || ||||| |||| | Sbjct: 366 gtcttgccggtcagggtcttcacgaagatctgcatgccacccctcagacggaggaccagg 307 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 306 tgcagggtt-gactccttctggatgttgta 278 Score = 167 bits (84), Expect = 4e-38 Identities = 182/215 (84%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| |||||||||||||| ||||| || | || ||||||||| Sbjct: 318 cggaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcggcca 259 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 258 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 199 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||| ||||||||| Sbjct: 198 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatg 139 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||| || |||||||| |||||||||||||| Sbjct: 138 gtcttgccggtcagggtcttcacgaagatctgcat 104
>gb|BC008661.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:3598724), complete cds Length = 777 Score = 224 bits (113), Expect = 2e-55 Identities = 243/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 528 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 469 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 468 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 409 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||| ||||| ||||| || ||||||||| | ||| || Sbjct: 408 gatgccctccttgtcctggatcttagccttgacattctctatggtgtcactgggctcgac 349 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 348 ctccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgag 289 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 288 gcgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 244 Score = 176 bits (89), Expect = 4e-41 Identities = 193/228 (84%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| || |||| ||| ||||| ||||| |||||||| |||||||| | Sbjct: 300 gccacctctgaggcgaaggaccaggtgcagggtggactctttctggatgttgtagtctga 241 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| ||||||||||| || |||||||| || |||||||| || | ||||||||| || || Sbjct: 240 cagggtgcggccatcttccagctgcttgcctgcaaagatcagcctctgctggtcaggggg 181 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||||||||| ||||| || ||||||||| | ||| || Sbjct: 180 gatgccctccttgtcctggatctttgccttgacattctcaatggtgtcactgggctcgac 121 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 120 ctccagggtgatggtcttaccagttaaggttttcacaaagatctgcat 73 Score = 101 bits (51), Expect = 2e-18 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgagg 409 |||||||||||||||||||| || |||||||| || ||||||||||| ||||| |||||| Sbjct: 575 tccagggtgatggtcttgcctgtcagggtcttcacaaagatctgcatgccacctctgagg 516 Query: 410 cggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || || |||| |||||| ||||||| ||||||||||||||||| Sbjct: 515 cgaaggaccaggtgcag-ggtggactctttctggatgttgtagtc 472
>dbj|AK013873.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3000008M07 product:ubiquitin B, full insert sequence Length = 1162 Score = 224 bits (113), Expect = 2e-55 Identities = 231/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 996 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 937 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || |||||||||||||| Sbjct: 936 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcctta 877 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 876 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 817 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 816 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 757 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 756 tgcagggtt-gactccttctggatgttgta 728 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 771 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 712 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 711 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 652 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 651 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 592 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 591 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 532 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 531 aggtgcagggtt-gactctttctggatgttgta 500 Score = 184 bits (93), Expect = 2e-43 Identities = 226/270 (83%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 540 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 481 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 480 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 421 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||| ||||||||||| Sbjct: 420 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacccccagggtgatg 361 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 360 gtcttgccggtaagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 301 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||| ||||||| Sbjct: 300 tgcagggtt-gactccttctggttgttgta 272 Score = 133 bits (67), Expect = 5e-28 Identities = 180/218 (82%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||| | ||||| || | || |||| Sbjct: 315 aggcgaaggaccaggtgcagggttgactccttctggttgttgtaatcagagagggtgctt 256 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 255 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 196 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||| ||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 195 ttatcccggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 136 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 135 atggtcttgccggtcagggtcttcacgaagatctgcat 98
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 224 bits (113), Expect = 2e-55 Identities = 202/232 (87%) Strand = Plus / Plus Query: 165 acaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagt 224 |||||||||||||||| ||||| || | |||||||||||||||||||| || ||||||| Sbjct: 5073179 acaggccaccacggagacggaggacaagatggagggtcgactccttctgaatgttgtagt 5073238 Query: 225 ccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccg 284 | || || ||||| || ||||| |||||||| ||||| |||||||||||||||||||||| Sbjct: 5073239 cagcaagggtgcgtccttcctcgagctgcttgccagcgaagatgaggcgctgctggtccg 5073298 Query: 285 gtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgact 344 | || || |||||||| ||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 5073299 ggggaataccctccttatcctggatcttcgccttcacattgtcgattgtgtcggatgact 5073358 Query: 345 caacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 | ||||| |||||||||| |||||| || ||||| || || ||||||||||| Sbjct: 5073359 ccacctcaagggtgatggacttgccggtcagggttttcacaaagatctgcat 5073410 Score = 60.0 bits (30), Expect = 7e-06 Identities = 92/110 (83%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 288 ggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat-gactca 346 ||||||| |||||||||||||||| |||||||| | |||||| ||||| ||| | ||| Sbjct: 5088203 ggatgcctaccttgtcctggatcttcgccttcacgtcgtcgatcgtgtcggatggtctc- 5088261 Query: 347 acctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||||||||| |||| || || ||||| |||| ||||||||| Sbjct: 5088262 acctcgagggtgatggtgatgccggtcagagtcttcacgatgatctgcat 5088311
>gb|AF298826.1|AF298826 Prunus avium ubiquitin/ribosomal protein 27a (Ubi) mRNA, complete cds Length = 1323 Score = 224 bits (113), Expect = 2e-55 Identities = 199/228 (87%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 ||||||||||||||| ||||| | |||||||||||| ||||||||||| ||||| || || Sbjct: 262 gccaccacggaggcgaagcacaaggtggagggtcgattccttctggatgttgtaatcggc 203 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || ||||| ||||| |||||||| || || |||||||||||||||||||| || || Sbjct: 202 tagggttcggccgtcctcgagctgcttgccggcgaagatgaggcgctgctggtctggggg 143 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 142 aatgccctccttgtcttggatcttggccttcacattgtcgatggtgtcagaggactcgac 83 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| ||||| |||||||| || || ||||| || |||||||||||||| Sbjct: 82 ctctagggtaatggtcttacccgttagggttttcacgaagatctgcat 35
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 224 bits (113), Expect = 2e-55 Identities = 202/232 (87%) Strand = Plus / Plus Query: 165 acaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagt 224 |||||||||||||||| ||||| || | |||||||||||||||||||| || ||||||| Sbjct: 110736 acaggccaccacggagacggaggacaagatggagggtcgactccttctgaatgttgtagt 110795 Query: 225 ccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccg 284 | || || ||||| || ||||| |||||||| ||||| |||||||||||||||||||||| Sbjct: 110796 cagcaagggtgcgtccttcctcgagctgcttgccagcgaagatgaggcgctgctggtccg 110855 Query: 285 gtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgact 344 | || || |||||||| ||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 110856 ggggaataccctccttatcctggatcttcgccttcacattgtcgattgtgtcggatgact 110915 Query: 345 caacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 | ||||| |||||||||| |||||| || ||||| || || ||||||||||| Sbjct: 110916 ccacctcaagggtgatggacttgccggtcagggttttcacaaagatctgcat 110967 Score = 60.0 bits (30), Expect = 7e-06 Identities = 92/110 (83%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 288 ggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat-gactca 346 ||||||| |||||||||||||||| |||||||| | |||||| ||||| ||| | ||| Sbjct: 125760 ggatgcctaccttgtcctggatcttcgccttcacgtcgtcgatcgtgtcggatggtctc- 125818 Query: 347 acctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||||||||| |||| || || ||||| |||| ||||||||| Sbjct: 125819 acctcgagggtgatggtgatgccggtcagagtcttcacgatgatctgcat 125868
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 224 bits (113), Expect = 2e-55 Identities = 202/232 (87%) Strand = Plus / Plus Query: 165 acaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagt 224 |||||||||||||||| ||||| || | |||||||||||||||||||| || ||||||| Sbjct: 22943 acaggccaccacggagacggaggacaagatggagggtcgactccttctgaatgttgtagt 23002 Query: 225 ccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccg 284 | || || ||||| || ||||| |||||||| ||||| |||||||||||||||||||||| Sbjct: 23003 cagcaagggtgcgtccttcctcgagctgcttgccagcgaagatgaggcgctgctggtccg 23062 Query: 285 gtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgact 344 | || || |||||||| ||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 23063 ggggaataccctccttatcctggatcttcgccttcacattgtcgattgtgtcggatgact 23122 Query: 345 caacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 | ||||| |||||||||| |||||| || ||||| || || ||||||||||| Sbjct: 23123 ccacctcaagggtgatggacttgccggtcagggttttcacaaagatctgcat 23174 Score = 60.0 bits (30), Expect = 7e-06 Identities = 92/110 (83%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 288 ggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagat-gactca 346 ||||||| |||||||||||||||| |||||||| | |||||| ||||| ||| | ||| Sbjct: 37967 ggatgcctaccttgtcctggatcttcgccttcacgtcgtcgatcgtgtcggatggtctc- 38025 Query: 347 acctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||||||||| |||| || || ||||| |||| ||||||||| Sbjct: 38026 acctcgagggtgatggtgatgccggtcagagtcttcacgatgatctgcat 38075
>gb|U29161.1|ZMU29161 Zea mays clone MubG7 ubiquitin fusion protein gene, complete cds Length = 2985 Score = 224 bits (113), Expect = 2e-55 Identities = 199/228 (87%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 2156 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggc 2097 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || |||||||| ||||| |||||||| || || ||||| || |||||||||||||| || Sbjct: 2096 gagggtgcggccgtcctcgagctgcttgccggcgaagattagccgctgctggtccggcgg 2037 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||| ||||| |||||||| |||||||||||||| || ||||| || Sbjct: 2036 gatgccctccttgtcctgtatcttggccttcacgttgtcgatggtgtccgaggactccac 1977 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||| || || || || |||||||| |||||||||||||| Sbjct: 1976 ctccaacgtgatcgttttccccgtcagggtcttcacgaagatctgcat 1929 Score = 54.0 bits (27), Expect = 4e-04 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| || | |||||||||||||||||||||||| Sbjct: 2147 gaggcggagcaccaggtggagggt-ggactccttctggatgttgtagtc 2100
>gb|AC163692.4| Mus musculus BAC clone RP24-68H1 from chromosome 14, complete sequence Length = 224333 Score = 224 bits (113), Expect = 2e-55 Identities = 231/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 145429 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 145488 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 145489 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 145548 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 145549 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 145608 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||||||||| |||||||| |||||||||||||| |||||||| || ||||| |||| | Sbjct: 145609 gtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggaccagg 145668 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || ||||| |||||||||||||| Sbjct: 145669 tgcagggtt-gactctttctggatgttgta 145697 Score = 208 bits (105), Expect = 1e-50 Identities = 229/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 145657 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 145716 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 145717 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 145776 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 145777 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 145836 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| |||||||| || ||||| |||| | Sbjct: 145837 gtcttgccggtcagggtcttcacgaagatctgcatgccacccctcagacggaggaccagg 145896 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 145897 tgcagggtt-gactccttctggatgttgta 145925 Score = 167 bits (84), Expect = 4e-38 Identities = 182/215 (84%) Strand = Plus / Plus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| |||||||||||||| ||||| || | || ||||||||| Sbjct: 145885 cggaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcggcca 145944 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 145945 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 146004 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||| ||||||||| Sbjct: 146005 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatg 146064 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||| || |||||||| |||||||||||||| Sbjct: 146065 gtcttgccggtcagggtcttcacgaagatctgcat 146099
>gb|M68937.1|MZEUBFA Zea mays ubiquitin fusion protein (UBF9) gene, complete cds Length = 1624 Score = 224 bits (113), Expect = 2e-55 Identities = 199/228 (87%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 1134 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggc 1075 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || |||||||| ||||| |||||||| || || ||||| || |||||||||||||| || Sbjct: 1074 gagggtgcggccgtcctcgagctgcttgccggcgaagattagccgctgctggtccggcgg 1015 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||| ||||| |||||||| |||||||||||||| || ||||| || Sbjct: 1014 gatgccctccttgtcctgtatcttggccttcacgttgtcgatggtgtccgaggactccac 955 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||| || || || || |||||||| |||||||||||||| Sbjct: 954 ctccaacgtgatcgttttccccgtcagggtcttcacgaagatctgcat 907 Score = 54.0 bits (27), Expect = 4e-04 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| || | |||||||||||||||||||||||| Sbjct: 1125 gaggcggagcaccaggtggagggt-ggactccttctggatgttgtagtc 1078
>ref|XM_415105.1| PREDICTED: Gallus gallus ubiquitin (LOC396190), mRNA Length = 1349 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| |||||||||||||| |||||||| | ||||||||| Sbjct: 957 gaggcgcagcaccaggtgcagggtggactccttctggatgttgtagtcggacagagtgcg 898 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| ||||||||||| || | |||||| || || || |||||||| Sbjct: 897 cccatcttccagctgcttgccagcaaagatcagcctctgctgatcggggggaatgccctc 838 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| |||||||| || || ||||||||| | ||| ||||||||||| Sbjct: 837 cttgtcctggatcttggccttcacgttctcaatggtgtcactgggctcgacctccagggt 778 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| || ||||||||||| |||||||||||||| || || Sbjct: 777 gatggtcttgcctgtcaaggtcttcacaaagatctgcatgccacccctgaggcgcaggac 718 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 | || ||| ||||||||||||||||||||||||| Sbjct: 717 aagatggagag-tggactccttctggatgttgtagtc 682 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1185 gaggcgcagcaccaggtgcagggtggactccttctggatgttgtagtcagacagggtgcg 1126 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| ||||||||||| || | ||| || || || || |||||||| Sbjct: 1125 tccatcttccagctgcttgccagcaaagatcagcctctgttgatcggggggaatgccctc 1066 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| |||||||| || || |||||||| | || ||||||||||| Sbjct: 1065 cttgtcctggatcttggccttcacgttctcaatggtgtcgctgggttccacctccagggt 1006 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||||||||||||||| | |||||| || ||||||||||| || ||||||||||| ||||| Sbjct: 1005 gatggtcttgccagtcaaggtcttcacaaagatctgcatccctcccctgaggcgcagcac 946 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 945 caggtgcag-ggtggactccttctggatgttgtagtc 910 Score = 159 bits (80), Expect = 1e-35 Identities = 172/203 (84%) Strand = Plus / Minus Query: 194 tggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgc 253 ||||| || |||||||||||||| |||||||| | ||| ||||| || || || |||||| Sbjct: 713 tggagagtggactccttctggatgttgtagtcggacagggtgcgcccgtcttccagctgc 654 Query: 254 ttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatcttt 313 || ||||| ||||| || | |||||| || || || ||||||||||||||||||||||| Sbjct: 653 ttgccagcgaagatcagcctctgctgatcggggggaatgccctccttgtcctggatcttg 594 Query: 314 gccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtg 373 ||||| ||||| |||||||| ||| | || ||||||| ||||||||||||||||||| Sbjct: 593 gccttgacattctcgatggtatcactgggttccacctccaaggtgatggtcttgccagtg 534 Query: 374 agggtcttaacgaagatctgcat 396 |||||||| |||||||||||||| Sbjct: 533 agggtcttcacgaagatctgcat 511 Score = 73.8 bits (37), Expect = 4e-10 Identities = 54/59 (91%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 396 taccacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||| Sbjct: 1195 taccacccctgaggcgcagcaccaggtgcagggt-ggactccttctggatgttgtagtc 1138
>ref|XM_586525.2| PREDICTED: Bos taurus polyubiquitin, transcript variant 1 (UBC), mRNA Length = 2416 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactccttctggatgttgtagtc 1604 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2325 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2266 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2265 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2206 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2205 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2146 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2145 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2086 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2085 g-tggactctttctggatgttgtagtc 2060 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactctttctggatgttgtagtc 1832 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_874972.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 17 (UBC), mRNA Length = 2588 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2051 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1992 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1991 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1932 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1931 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1872 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1871 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1812 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1811 caggtgcagag-tggactccttctggatgttgtagtc 1776 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1823 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1764 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1763 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1704 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1703 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1644 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1643 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1584 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1583 caggtgcagag-tggactctttctggatgttgtagtc 1548 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1139 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1080 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1079 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1020 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1019 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 960 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 959 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 900 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 899 caggtgcagag-tggactctttctggatgttgtagtc 864 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 683 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 624 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 623 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 564 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 563 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 504 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 503 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 444 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 443 caggtgcagag-tggactctttctggatgttgtagtc 408 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2497 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2438 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2437 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2378 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2377 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2318 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2317 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2258 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2257 g-tggactctttctggatgttgtagtc 2232 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2279 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2220 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2219 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2160 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2159 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2100 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2099 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2040 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2039 caggtgcagag-tggactctttctggatgttgtagtc 2004 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1367 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1308 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1307 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1248 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1247 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1188 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1187 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1128 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1127 caggtgcagag-tggactctttctggatgttgtagtc 1092 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 911 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 852 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 851 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 792 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 791 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 732 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 731 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 672 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 671 caggtgcagag-tggactctttctggatgttgtagtc 636 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 455 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 396 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 395 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 336 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 335 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 276 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 275 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 216 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 215 caggtgcagag-tggactctttctggatgttgtagtc 180 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1595 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1536 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1535 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1476 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1475 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1416 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1415 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1356 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1355 caggtgcagag-tggactctttctggatgttgtagtc 1320 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 227 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 168 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 167 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 108 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 107 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 48 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 47 gatggttttaccagtgagggtcttcacaaagatctgcat 9
>ref|XM_874894.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 16 (UBC), mRNA Length = 2416 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2325 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2266 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2265 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2206 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2205 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2146 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2145 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2086 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2085 g-tggactctttctggatgttgtagtc 2060 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactctttctggatgttgtagtc 1832 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_875774.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 27 (UBC), mRNA Length = 2458 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1921 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1862 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1861 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1802 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1801 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1742 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1741 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1682 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1681 caggtgcagag-tggactccttctggatgttgtagtc 1646 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 553 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 494 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 493 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 434 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 433 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 374 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 373 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 314 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 313 caggtgcagag-tggactctttctggatgttgtagtc 278 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1693 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1634 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1633 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1574 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1573 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1514 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1513 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1454 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1453 caggtgcagag-tggactctttctggatgttgtagtc 1418 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1009 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 950 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 949 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 890 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 889 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 830 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 829 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 770 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 769 caggtgcagag-tggactctttctggatgttgtagtc 734 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 781 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 722 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 721 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 662 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 661 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 602 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 601 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 542 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 541 caggtgcagag-tggactccttctggatgttgtagtc 506 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 325 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 266 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 265 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 206 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 205 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 146 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 145 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 86 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 85 caggtgcagag-tggactctttctggatgttgtagtc 50 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2367 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2308 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2307 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2248 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2247 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2188 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2187 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2128 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2127 g-tggactctttctggatgttgtagtc 2102 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2149 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2090 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2089 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2030 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2029 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1970 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1969 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1910 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1909 caggtgcagag-tggactctttctggatgttgtagtc 1874 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1237 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1178 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1177 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1118 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1117 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1058 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1057 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 998 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 997 caggtgcagag-tggactctttctggatgttgtagtc 962 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1465 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1406 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1405 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1346 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1345 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1286 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1285 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1226 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1225 caggtgcagag-tggactctttctggatgttgtagtc 1190
>ref|XM_874811.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 15 (UBC), mRNA Length = 2416 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactccttctggatgttgtagtc 1604 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2325 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2266 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2265 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2206 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2205 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2146 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2145 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2086 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2085 g-tggactctttctggatgttgtagtc 2060 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactctttctggatgttgtagtc 1832 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_874725.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 14 (UBC), mRNA Length = 2644 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactctttctggatgttgtagtc 1832 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2553 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2494 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2493 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2434 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2433 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2374 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2373 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2314 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2313 g-tggactctttctggatgttgtagtc 2288 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2335 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2276 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2275 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2216 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2215 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2156 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2155 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2096 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2095 caggtgcagag-tggactctttctggatgttgtagtc 2060 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_874640.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 13 (UBC), mRNA Length = 2644 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactccttctggatgttgtagtc 1832 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2553 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2494 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2493 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2434 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2433 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2374 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2373 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2314 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2313 g-tggactctttctggatgttgtagtc 2288 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2335 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2276 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2275 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2216 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2215 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2156 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2155 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2096 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2095 caggtgcagag-tggactctttctggatgttgtagtc 2060 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_875701.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 26 (UBC), mRNA Length = 2580 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2043 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1984 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1983 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1924 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1923 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1864 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1863 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1804 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1803 caggtgcagag-tggactccttctggatgttgtagtc 1768 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 675 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 616 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 615 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 556 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 555 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 496 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 495 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 436 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 435 caggtgcagag-tggactctttctggatgttgtagtc 400 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1815 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1756 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1755 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1696 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1695 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1636 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1635 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1576 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1575 caggtgcagag-tggactctttctggatgttgtagtc 1540 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1131 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1072 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1071 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1012 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1011 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 952 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 951 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 892 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 891 caggtgcagag-tggactctttctggatgttgtagtc 856 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 903 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 844 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 843 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 784 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 783 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 724 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 723 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 664 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 663 caggtgcagag-tggactccttctggatgttgtagtc 628 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 447 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 388 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 387 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 328 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 327 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 268 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 267 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 208 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 207 caggtgcagag-tggactctttctggatgttgtagtc 172 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2489 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2430 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2429 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2370 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2369 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2310 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2309 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2250 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2249 g-tggactctttctggatgttgtagtc 2224 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2271 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2212 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2211 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2152 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2151 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2092 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2091 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2032 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2031 caggtgcagag-tggactctttctggatgttgtagtc 1996 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1359 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1300 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1299 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1240 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1239 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1180 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1179 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1120 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1119 caggtgcagag-tggactctttctggatgttgtagtc 1084 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1587 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1528 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1527 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1468 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1467 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1408 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1407 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1348 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1347 caggtgcagag-tggactctttctggatgttgtagtc 1312 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 219 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 160 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 159 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 100 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 99 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 40 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 39 gatggttttaccagtgagggtcttcacaaagatctgcat 1
>ref|XM_875631.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 25 (UBC), mRNA Length = 2644 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactccttctggatgttgtagtc 1832 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2553 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2494 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2493 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2434 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2433 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2374 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2373 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2314 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2313 g-tggactctttctggatgttgtagtc 2288 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2335 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2276 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2275 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2216 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2215 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2156 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2155 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2096 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2095 caggtgcagag-tggactctttctggatgttgtagtc 2060 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_875556.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 24 (UBC), mRNA Length = 2580 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2043 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1984 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1983 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1924 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1923 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1864 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1863 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1804 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1803 caggtgcagag-tggactccttctggatgttgtagtc 1768 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 675 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 616 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 615 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 556 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 555 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 496 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 495 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 436 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 435 caggtgcagag-tggactctttctggatgttgtagtc 400 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1815 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1756 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1755 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1696 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1695 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1636 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1635 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1576 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1575 caggtgcagag-tggactctttctggatgttgtagtc 1540 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1131 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1072 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1071 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1012 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1011 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 952 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 951 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 892 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 891 caggtgcagag-tggactctttctggatgttgtagtc 856 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 903 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 844 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 843 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 784 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 783 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 724 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 723 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 664 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 663 caggtgcagag-tggactccttctggatgttgtagtc 628 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2489 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2430 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2429 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2370 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2369 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2310 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2309 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2250 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2249 g-tggactctttctggatgttgtagtc 2224 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2271 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2212 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2211 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2152 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2151 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2092 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2091 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2032 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2031 caggtgcagag-tggactctttctggatgttgtagtc 1996 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1359 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1300 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1299 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1240 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1239 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1180 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1179 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1120 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1119 caggtgcagag-tggactctttctggatgttgtagtc 1084 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 447 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 388 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 387 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 328 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 327 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 268 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 267 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 208 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 207 caggtgcagag-tggactctttctggatgttgtagtc 172 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1587 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1528 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1527 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1468 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1467 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1408 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1407 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1348 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1347 caggtgcagag-tggactctttctggatgttgtagtc 1312 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 219 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 160 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 159 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 100 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 99 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 40 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 39 gatggttttaccagtgagggtcttcacaaagatctgcat 1
>ref|XM_875261.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 20 (UBC), mRNA Length = 2643 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2335 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2276 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2275 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2216 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2215 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2156 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2155 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2096 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 2095 caggtgcagag-tggactccttctggatgttgtagtc 2060 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactctttctggatgttgtagtc 1832 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2553 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2494 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2493 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2434 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2433 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2374 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2373 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2314 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2313 g-tggactctttctggatgttgtagtc 2288 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_875198.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 19 (UBC), mRNA Length = 2588 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2051 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1992 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1991 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1932 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1931 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1872 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1871 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1812 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1811 caggtgcagag-tggactccttctggatgttgtagtc 1776 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1823 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1764 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1763 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1704 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1703 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1644 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1643 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1584 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1583 caggtgcagag-tggactctttctggatgttgtagtc 1548 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1139 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1080 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1079 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1020 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1019 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 960 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 959 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 900 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 899 caggtgcagag-tggactctttctggatgttgtagtc 864 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 683 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 624 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 623 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 564 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 563 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 504 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 503 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 444 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 443 caggtgcagag-tggactctttctggatgttgtagtc 408 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2497 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2438 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2437 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2378 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2377 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2318 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2317 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2258 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2257 g-tggactctttctggatgttgtagtc 2232 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2279 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2220 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2219 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2160 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2159 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2100 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2099 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2040 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2039 caggtgcagag-tggactctttctggatgttgtagtc 2004 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1367 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1308 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1307 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1248 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1247 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1188 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1187 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1128 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1127 caggtgcagag-tggactctttctggatgttgtagtc 1092 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 911 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 852 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 851 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 792 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 791 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 732 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 731 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 672 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 671 caggtgcagag-tggactctttctggatgttgtagtc 636 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 455 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 396 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 395 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 336 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 335 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 276 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 275 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 216 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 215 caggtgcagag-tggactctttctggatgttgtagtc 180 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1595 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1536 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1535 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1476 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1475 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1416 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1415 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1356 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1355 caggtgcagag-tggactctttctggatgttgtagtc 1320 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 227 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 168 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 167 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 108 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 107 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 48 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 47 gatggttttaccagtgagggtcttcacaaagatctgcat 9
>ref|XM_875130.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 18 (UBC), mRNA Length = 2825 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactctttctggatgttgtagtc 1832 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2737 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2678 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2677 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2618 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2617 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2558 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2557 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2498 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2497 g-tggactctttctggatgttgtagtc 2472 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 182 bits (92), Expect = 7e-43 Identities = 210/250 (84%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2519 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2460 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2459 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2400 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2399 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2340 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2339 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2280 Query: 418 cangtgcaga 427 || ||||||| Sbjct: 2279 caggtgcaga 2270 Score = 176 bits (89), Expect = 4e-41 Identities = 169/195 (86%), Gaps = 1/195 (0%) Strand = Plus / Minus Query: 260 gcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttc 319 |||||||| || | ||||||||| || ||||||||||| ||||| |||||||| ||||| Sbjct: 2253 gcaaagatcagcctctgctggtctggggggatgccctctttgtcttggatcttggccttg 2194 Query: 320 acattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtc 379 || || |||||||||||| | ||| ||||||||||||||||||||||| || | |||| Sbjct: 2193 acgttctcgatggtgtcactgggctccacctccagggtgatggtcttgccggtcaaggtc 2134 Query: 380 ttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactcctt 439 || |||||||||||||| ||||| ||||||||||| |||| ||||||| |||||||||| Sbjct: 2133 ttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcagag-tggactcctt 2075 Query: 440 ctggatgttgtagtc 454 ||||||||||||||| Sbjct: 2074 ctggatgttgtagtc 2060 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_875488.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 23 (UBC), mRNA Length = 2644 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactccttctggatgttgtagtc 1832 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2553 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2494 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2493 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2434 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2433 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2374 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2373 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2314 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2313 g-tggactctttctggatgttgtagtc 2288 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2335 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2276 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2275 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2216 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2215 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2156 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2155 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2096 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2095 caggtgcagag-tggactctttctggatgttgtagtc 2060 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_875413.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 22 (UBC), mRNA Length = 2644 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactctttctggatgttgtagtc 1832 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2553 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2494 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2493 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2434 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2433 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2374 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2373 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2314 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2313 g-tggactctttctggatgttgtagtc 2288 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2335 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2276 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2275 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2216 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2215 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2156 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2155 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2096 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2095 caggtgcagag-tggactctttctggatgttgtagtc 2060 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_875335.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 21 (UBC), mRNA Length = 2659 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2122 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2063 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2062 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2003 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 2002 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1943 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1942 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1883 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1882 caggtgcagag-tggactccttctggatgttgtagtc 1847 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1894 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1835 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1834 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1775 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1774 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1715 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1714 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1655 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1654 caggtgcagag-tggactctttctggatgttgtagtc 1619 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2568 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2509 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2508 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2449 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2448 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2389 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2388 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2329 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2328 g-tggactctttctggatgttgtagtc 2303 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2350 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2291 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2290 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2231 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2230 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2171 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2170 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2111 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2110 caggtgcagag-tggactctttctggatgttgtagtc 2075 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1438 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1379 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1378 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1319 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1318 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1259 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1258 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1199 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1198 caggtgcagag-tggactctttctggatgttgtagtc 1163 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1666 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1607 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1606 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1547 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1546 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1487 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1486 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1427 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1426 caggtgcagag-tggactctttctggatgttgtagtc 1391 Score = 129 bits (65), Expect = 9e-27 Identities = 157/188 (83%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1210 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1151 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1150 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1091 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1090 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1031 Query: 358 gatggtct 365 |||||||| Sbjct: 1030 gatggtct 1023 Score = 127 bits (64), Expect = 3e-26 Identities = 96/106 (90%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||| || | |||||| |||||||||||||| ||||| ||||| Sbjct: 1024 ctccagggtgatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgag 965 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 964 gcggaggaccaggtgcagag-tggactccttctggatgttgtagtc 920 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_874550.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 12 (UBC), mRNA Length = 2188 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2097 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2038 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2037 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 1978 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 1977 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 1918 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 1917 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 1858 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 1857 g-tggactctttctggatgttgtagtc 1832 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_874473.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 11 (UBC), mRNA Length = 2415 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactctttctggatgttgtagtc 1832 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2325 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2266 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2265 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2206 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2205 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2146 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2145 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2086 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2085 g-tggactctttctggatgttgtagtc 2060 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_874390.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 10 (UBC), mRNA Length = 2415 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2325 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2266 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2265 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2206 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2205 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2146 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2145 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2086 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2085 g-tggactctttctggatgttgtagtc 2060 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactctttctggatgttgtagtc 1832 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_874317.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 9 (UBC), mRNA Length = 2416 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2325 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2266 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2265 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2206 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2205 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2146 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2145 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2086 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2085 g-tggactctttctggatgttgtagtc 2060 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactctttctggatgttgtagtc 1832 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>ref|XM_874230.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 8 (UBC), mRNA Length = 2613 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2076 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2017 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2016 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1957 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1956 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1897 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1896 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1837 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1836 caggtgcagag-tggactccttctggatgttgtagtc 1801 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 828 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 769 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 768 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 709 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 708 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 649 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 648 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 589 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 588 caggtgcagag-tggactctttctggatgttgtagtc 553 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1848 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1789 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1788 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1729 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1728 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1669 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1668 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1609 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1608 caggtgcagag-tggactctttctggatgttgtagtc 1573 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 600 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 541 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 540 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 481 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 480 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 421 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 420 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 361 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 360 caggtgcagag-tggactctttctggatgttgtagtc 325 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2522 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2463 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2462 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2403 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2402 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2343 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2342 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2283 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2282 g-tggactctttctggatgttgtagtc 2257 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2304 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2245 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2244 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2185 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2184 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2125 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2124 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2065 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2064 caggtgcagag-tggactctttctggatgttgtagtc 2029 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1392 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1333 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1332 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1273 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1272 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1213 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1212 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1153 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1152 caggtgcagag-tggactctttctggatgttgtagtc 1117 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1620 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1561 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1560 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1501 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1500 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1441 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1440 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1381 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1380 caggtgcagag-tggactctttctggatgttgtagtc 1345 Score = 182 bits (92), Expect = 7e-43 Identities = 190/222 (85%), Gaps = 1/222 (0%) Strand = Plus / Minus Query: 233 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 292 ||||| ||||| || ||||| || || |||||||| || | ||||||||| || |||||| Sbjct: 1001 gtgcgcccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatg 942 Query: 293 ccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctcc 352 ||||| ||||| |||||||| ||||| || || |||||||||||| | ||| |||||| Sbjct: 941 ccctctttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctcc 882 Query: 353 agggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcgg 412 ||||||||||||||||| || | |||||| |||||||||||||| ||||| ||||||||| Sbjct: 881 agggtgatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcgg 822 Query: 413 agcaccangtgcaganttggactccttctggatgttgtagtc 454 || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 821 aggaccaggtgcagag-tggactccttctggatgttgtagtc 781 Score = 113 bits (57), Expect = 5e-22 Identities = 134/160 (83%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1164 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1105 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1104 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1045 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtca 337 ||||| |||||||| ||||| || || |||||||||||| Sbjct: 1044 tttgtcttggatcttggccttgacgttctcgatggtgtca 1005 Score = 109 bits (55), Expect = 8e-21 Identities = 159/194 (81%) Strand = Plus / Minus Query: 203 gactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 262 ||||| |||||||| |||||||| | ||| ||||||||||| || ||||| || || ||| Sbjct: 194 gactctttctggatgttgtagtcagacagggtgcggccatcttccagctgtttcccggca 135 Query: 263 aagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcaca 322 ||||| || | ||||||||| || |||||||| || || || || ||||| |||| || Sbjct: 134 aagatcagcctctgctggtctggggggatgccttctttttcttgtatcttccccttgacg 75 Query: 323 ttgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtctta 382 || |||||||||||| | ||| |||||||| |||||||| || |||||||||||||| Sbjct: 74 ttctcgatggtgtcactgggctccacctccagagtgatggttttaccagtgagggtcttc 15 Query: 383 acgaagatctgcat 396 || ||||||||||| Sbjct: 14 acaaagatctgcat 1 Score = 105 bits (53), Expect = 1e-19 Identities = 133/160 (83%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 372 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 313 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 312 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 253 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtca 337 ||||| |||||||| ||||| || || |||||||||||| Sbjct: 252 tttgtcttggatcttggccttgacgttctcgatggtgtca 213 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 196 tggactctttctggatgttgtagtc 172
>ref|XM_874142.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 7 (UBC), mRNA Length = 2172 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1595 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1536 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1535 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1476 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1475 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1416 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1415 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1356 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1355 caggtgcagag-tggactccttctggatgttgtagtc 1320 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1367 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1308 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1307 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1248 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1247 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1188 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1187 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1128 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1127 caggtgcagag-tggactctttctggatgttgtagtc 1092 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 911 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 852 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 851 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 792 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 791 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 732 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 731 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 672 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 671 caggtgcagag-tggactctttctggatgttgtagtc 636 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 683 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 624 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 623 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 564 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 563 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 504 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 503 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 444 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 443 caggtgcagag-tggactctttctggatgttgtagtc 408 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2041 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 1982 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 1981 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 1922 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 1921 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 1862 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 1861 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 1802 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 1801 g-tggactctttctggatgttgtagtc 1776 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1823 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1764 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1763 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1704 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1703 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1644 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1643 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1584 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1583 caggtgcagag-tggactctttctggatgttgtagtc 1548 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 455 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 396 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 395 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 336 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 335 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 276 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 275 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 216 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 215 caggtgcagag-tggactctttctggatgttgtagtc 180 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1139 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1080 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1079 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1020 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1019 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 960 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 959 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 900 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 899 caggtgcagag-tggactctttctggatgttgtagtc 864 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 227 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 168 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 167 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 108 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 107 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 48 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 47 gatggttttaccagtgagggtcttcacaaagatctgcat 9
>ref|XM_874048.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 6 (UBC), mRNA Length = 1904 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1367 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1308 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1307 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1248 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1247 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1188 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1187 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1128 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 1127 caggtgcagag-tggactccttctggatgttgtagtc 1092 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1139 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1080 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1079 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1020 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1019 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 960 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 959 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 900 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 899 caggtgcagag-tggactctttctggatgttgtagtc 864 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 683 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 624 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 623 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 564 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 563 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 504 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 503 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 444 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 443 caggtgcagag-tggactctttctggatgttgtagtc 408 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 1813 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 1754 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 1753 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 1694 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 1693 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 1634 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 1633 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 1574 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 1573 g-tggactctttctggatgttgtagtc 1548 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1595 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1536 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1535 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1476 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1475 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1416 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1415 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1356 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1355 caggtgcagag-tggactctttctggatgttgtagtc 1320 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 911 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 852 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 851 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 792 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 791 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 732 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 731 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 672 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 671 caggtgcagag-tggactctttctggatgttgtagtc 636 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 455 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 396 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 395 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 336 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 335 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 276 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 275 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 216 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 215 caggtgcagag-tggactctttctggatgttgtagtc 180 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 227 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 168 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 167 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 108 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 107 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 48 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 47 gatggttttaccagtgagggtcttcacaaagatctgcat 9
>ref|XM_873963.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 5 (UBC), mRNA Length = 1883 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1880 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1821 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1820 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1761 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1760 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1701 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1700 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1641 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1640 caggtgcagag-tggactctttctggatgttgtagtc 1605 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 200 bits (101), Expect = 3e-48 Identities = 210/246 (85%), Gaps = 1/246 (0%) Strand = Plus / Minus Query: 209 ttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatg 268 |||||||| |||||||| | ||| ||||||||||| || ||||| || || |||||||| Sbjct: 1392 ttctggatgttgtagtcagacagggtgcggccatcttccagctgtttcccggcaaagatc 1333 Query: 269 aggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcacattgtcg 328 || | ||||||||| || ||||||||||| ||||| |||||||| ||||| || || ||| Sbjct: 1332 agcctctgctggtctggggggatgccctctttgtcttggatcttggccttgacgttctcg 1273 Query: 329 atggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtcttaacgaag 388 ||||||||| | ||| ||||||||||||||||||||||| || | |||||| |||||| Sbjct: 1272 atggtgtcactgggctccacctccagggtgatggtcttgccggtcaaggtcttcacgaag 1213 Query: 389 atctgcataccacccctgaggcggagcaccangtgcaganttggactccttctggatgtt 448 |||||||| ||||| ||||||||||| |||| ||||||| ||||||| ||||||||||| Sbjct: 1212 atctgcatcccacctctgaggcggaggaccaggtgcagag-tggactctttctggatgtt 1154 Query: 449 gtagtc 454 |||||| Sbjct: 1153 gtagtc 1148 Score = 184 bits (93), Expect = 2e-43 Identities = 233/278 (83%), Gaps = 2/278 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1652 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1593 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1592 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1533 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1532 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1473 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1472 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1413 Query: 418 cangtgcaganttggac-tccttctggatgttgtagtc 454 || ||||||| ||||| || ||||||||||||||||| Sbjct: 1412 caggtgcagag-tggacttctttctggatgttgtagtc 1376 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65 Score = 65.9 bits (33), Expect = 1e-07 Identities = 47/51 (92%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 404 ctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 1882 ctgaggcggaggaccaggtgcagag-tggactccttctggatgttgtagtc 1833
>ref|XM_873860.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 4 (UBC), mRNA Length = 1546 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1009 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 950 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 949 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 890 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 889 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 830 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 829 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 770 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 769 caggtgcagag-tggactccttctggatgttgtagtc 734 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 781 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 722 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 721 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 662 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 661 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 602 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 601 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 542 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 541 caggtgcagag-tggactctttctggatgttgtagtc 506 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 1455 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 1396 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 1395 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 1336 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 1335 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 1276 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 1275 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 1216 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 1215 g-tggactctttctggatgttgtagtc 1190 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1237 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1178 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1177 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1118 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1117 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1058 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1057 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 998 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 997 caggtgcagag-tggactctttctggatgttgtagtc 962 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 553 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 494 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 493 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 434 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 433 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 374 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 373 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 314 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 313 caggtgcagag-tggactctttctggatgttgtagtc 278 Score = 163 bits (82), Expect = 6e-37 Identities = 189/225 (84%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 227 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 168 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 167 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 108 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 107 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 48 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacc 402 |||||||||||| || | |||||| |||||||||||||| ||||| Sbjct: 47 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacc 3 Score = 61.9 bits (31), Expect = 2e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 325 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 266 Query: 238 gccatcctcaagctgcttaccagcaaagat 267 |||||| || ||||| || || |||||||| Sbjct: 265 gccatcttccagctgtttcccggcaaagat 236 Score = 58.0 bits (29), Expect = 3e-05 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 404 ctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||||||||| |||| ||||||| | |||||| ||||||||||||||||| Sbjct: 229 ctgaggcggaggaccaggtgcagagt-ggactctttctggatgttgtagtc 180
>ref|XM_864638.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 3 (UBC), mRNA Length = 2872 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2335 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2276 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2275 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2216 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 2215 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 2156 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2155 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2096 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 2095 caggtgcagag-tggactccttctggatgttgtagtc 2060 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 967 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 908 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 907 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 848 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 847 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 788 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 787 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 728 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 727 caggtgcagag-tggactctttctggatgttgtagtc 692 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 2107 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 2048 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2047 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1988 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1987 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1928 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1927 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1868 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1867 caggtgcagag-tggactctttctggatgttgtagtc 1832 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1423 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1364 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1363 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1304 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1303 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1244 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1243 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1184 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1183 caggtgcagag-tggactctttctggatgttgtagtc 1148 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1195 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1136 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1135 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1076 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1075 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1016 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1015 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 956 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||||||||||||||||||||| Sbjct: 955 caggtgcagag-tggactccttctggatgttgtagtc 920 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 739 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 680 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 679 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 620 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 619 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 560 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 559 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 500 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 499 caggtgcagag-tggactctttctggatgttgtagtc 464 Score = 210 bits (106), Expect = 3e-51 Identities = 227/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||||||||| || Sbjct: 2781 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcggccatcttcc 2722 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || || |||||||| || | ||||||||| || ||||||||||| ||||| ||| Sbjct: 2721 agctgtttcccggcaaagatcagcctctgctggtctggggggatgccctctttgtcttgg 2662 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2661 atcttggccttgacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 2602 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || | |||||| |||||||||||||| ||||| ||||||||||| |||| ||||||| Sbjct: 2601 ccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcaga 2542 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2541 g-tggactctttctggatgttgtagtc 2516 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 2563 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 2504 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 2503 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 2444 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 2443 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 2384 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 2383 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 2324 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 2323 caggtgcagag-tggactctttctggatgttgtagtc 2288 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1651 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1592 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1591 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1532 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1531 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1472 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| |||| ||||||||||| || Sbjct: 1471 gatggtcttgccggtcaaggtcttcacgaagatctgcatcacacctctgaggcggaggac 1412 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1411 caggtgcagag-tggactctttctggatgttgtagtc 1376 Score = 206 bits (104), Expect = 5e-50 Identities = 234/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 511 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 452 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 451 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 392 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 391 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 332 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 331 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 272 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 271 caggtgcagag-tggactctttctggatgttgtagtc 236 Score = 198 bits (100), Expect = 1e-47 Identities = 233/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1879 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1820 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1819 cccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1760 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| |||||||| || Sbjct: 1759 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagagt 1700 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1699 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1640 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1639 caggtgcagag-tggactctttctggatgttgtagtc 1604 Score = 119 bits (60), Expect = 8e-24 Identities = 179/219 (81%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 283 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 224 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || |||||||| || Sbjct: 223 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccttc 164 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 || || || ||||| |||| || || |||||||||||| | ||| |||||||| || Sbjct: 163 tttttcttgtatcttccccttgacgttctcgatggtgtcactgggctccacctccagagt 104 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||||| || |||||||||||||| || ||||||||||| Sbjct: 103 gatggttttaccagtgagggtcttcacaaagatctgcat 65
>gb|BC060312.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:72686 IMAGE:6919609), complete cds Length = 1199 Score = 222 bits (112), Expect = 8e-55 Identities = 233/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| ||||| |||||||| ||||| || | || |||||| Sbjct: 1004 aggcggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcgg 945 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 944 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 885 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 884 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 825 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| ||| Sbjct: 824 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggacc 765 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || |||||||||||||||||||| Sbjct: 764 aggtgcagggtt-gactccttctggatgttgta 733 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| || | ||| ||||| ||||| |||||||| ||||| || | || |||||| Sbjct: 548 aggcggaggacaaggtgcagggttgactctttctggatgttgtaatcagagagggtgcgg 489 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 488 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 429 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 428 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 369 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| ||| Sbjct: 368 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggacc 309 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| || ||||| ||||||||||||||||| Sbjct: 308 aggtgcagggtt-gactctttctggatgttgtagtc 274 Score = 206 bits (104), Expect = 5e-50 Identities = 231/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 776 aggcggaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 717 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 716 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 657 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 656 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 597 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| || Sbjct: 596 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggaca 537 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 536 aggtgcagggtt-gactctttctggatgttgta 505 Score = 172 bits (87), Expect = 6e-40 Identities = 185/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| ||||| |||||||| |||||||| | || |||||| Sbjct: 320 aggcggaggaccaggtgcagggttgactctttctggatgttgtagtcagagagggtgcgg 261 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 260 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 201 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 200 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 141 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||| ||||| Sbjct: 140 atggtcttgccggtcagggtcttcacgaagatttgcat 103
>gb|AY232172.1| Drosophila yakuba clone yak-ad_RpL40 mRNA sequence Length = 384 Score = 222 bits (112), Expect = 8e-55 Identities = 198/227 (87%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||| | | Sbjct: 227 ccaccacgcagacggagcaccaagtggagggtggactccttctggatgttgtagtcggac 168 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||||||||| ||||| |||||||| || || ||||| || |||||||| || || || Sbjct: 167 agagtgcggccgtcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 108 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| | ||| ||| Sbjct: 107 atgccctccttatcctggatcttggccttgacattctcgatggtgtcagaaggctccacc 48 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||| ||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 47 tccaaggtgatggtcttgccggtgagggttttcacgaagatttgcat 1 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 196 tggactccttctggatgttgtagtc 172
>gb|AY231778.1| Drosophila yakuba clone yak-em_RpL40 mRNA sequence Length = 384 Score = 222 bits (112), Expect = 8e-55 Identities = 198/227 (87%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||| | | Sbjct: 227 ccaccacgcagacggagcaccaagtggagggtggactccttctggatgttgtagtcggac 168 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||||||||| ||||| |||||||| || || ||||| || |||||||| || || || Sbjct: 167 agagtgcggccgtcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 108 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| | ||| ||| Sbjct: 107 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 48 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||| ||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 47 tccaaggtgatggtcttgccggtgagggttttcacgaagatttgcat 1 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 196 tggactccttctggatgttgtagtc 172
>gb|DQ118117.1| Lupinus albus polyubiquitin mRNA, partial cds Length = 397 Score = 222 bits (112), Expect = 8e-55 Identities = 233/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||||||||| ||||| || |||||||||||||| |||||||| || || ||||| ||| Sbjct: 317 cggagcaccaaatggagtgtggactccttctggatgttgtagtcggctagggtgcgacca 258 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 |||||||||||||| || |||||||| | | ||||||||||||||| |||||||||||| Sbjct: 257 tcctcaagctgctttcctgcaaagatcaacctctgctggtccggtggaatgccctccttg 198 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||| || ||||| ||||| ||||| ||| ||||| ||||||||| Sbjct: 197 tcctggatcttagccttaacgttgtcaatggtatcagagctctccacctcaagggtgatg 138 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| ||||||||||| || ||||| ||||| ||||| | || |||||||| | | Sbjct: 137 gtcttgccggtgagggtcttgacaaagatttgcatgccaccgcgaagacggagcacaagg 78 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 || || ||||||||||||||||||||||||| Sbjct: 77 tggag-tgtggactccttctggatgttgtagtc 46 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| || || |||||||| | |||||| || |||||||||||||| |||||||| || Sbjct: 102 gccaccgcgaagacggagcacaaggtggagtgtggactccttctggatgttgtagtcggc 43 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgag 270 || |||||||| |||||||| ||||| || ||||||||||| Sbjct: 42 tagggtgcggccgtcctcaagttgctttccggcaaagatgag 1 Score = 75.8 bits (38), Expect = 1e-10 Identities = 91/108 (84%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 347 acctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctg 406 ||||| |||||||||||||| || || |||||||| || ||||| ||||||||||| | Sbjct: 380 acctcaagggtgatggtctttccggtaagggtcttgacaaagatttgcataccaccgcgt 321 Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 || |||||||||| || || ||||||||||||||||||||||||| Sbjct: 320 agacggagcaccaaatggag-tgtggactccttctggatgttgtagtc 274
>emb|X58195.1|GGPOUBII G.gallus DNA for polyubiquitin gene Ub II Length = 1483 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| |||||||||||||| |||||||| | ||||||||| Sbjct: 898 gaggcgcagcaccaggtgcagggtggactccttctggatgttgtagtcggacagagtgcg 839 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| ||||||||||| || | |||||| || || || |||||||| Sbjct: 838 cccatcttccagctgcttgccagcaaagatcagcctctgctgatcggggggaatgccctc 779 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| |||||||| || || ||||||||| | ||| ||||||||||| Sbjct: 778 cttgtcctggatcttggccttcacgttctcaatggtgtcactgggctcgacctccagggt 719 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| || ||||||||||| |||||||||||||| || || Sbjct: 718 gatggtcttgcctgtcaaggtcttcacaaagatctgcatgccacccctgaggcgcaggac 659 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 | || ||| ||||||||||||||||||||||||| Sbjct: 658 aagatggagag-tggactccttctggatgttgtagtc 623 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 1126 gaggcgcagcaccaggtgcagggtggactccttctggatgttgtagtcagacagggtgcg 1067 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| ||||||||||| || | ||| || || || || |||||||| Sbjct: 1066 tccatcttccagctgcttgccagcaaagatcagcctctgttgatcggggggaatgccctc 1007 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| |||||||| || || |||||||| | || ||||||||||| Sbjct: 1006 cttgtcctggatcttggccttcacgttctcaatggtgtcgctgggttccacctccagggt 947 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||||||||||||||| | |||||| || ||||||||||| || ||||||||||| ||||| Sbjct: 946 gatggtcttgccagtcaaggtcttcacaaagatctgcatccctcccctgaggcgcagcac 887 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 886 caggtgcag-ggtggactccttctggatgttgtagtc 851 Score = 159 bits (80), Expect = 1e-35 Identities = 172/203 (84%) Strand = Plus / Minus Query: 194 tggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgc 253 ||||| || |||||||||||||| |||||||| | ||| ||||| || || || |||||| Sbjct: 654 tggagagtggactccttctggatgttgtagtcggacagggtgcgcccgtcttccagctgc 595 Query: 254 ttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatcttt 313 || ||||| ||||| || | |||||| || || || ||||||||||||||||||||||| Sbjct: 594 ttgccagcgaagatcagcctctgctgatcggggggaatgccctccttgtcctggatcttg 535 Query: 314 gccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtg 373 ||||| ||||| |||||||| ||| | || ||||||| ||||||||||||||||||| Sbjct: 534 gccttgacattctcgatggtatcactgggttccacctccaaggtgatggtcttgccagtg 475 Query: 374 agggtcttaacgaagatctgcat 396 |||||||| |||||||||||||| Sbjct: 474 agggtcttcacgaagatctgcat 452 Score = 73.8 bits (37), Expect = 4e-10 Identities = 54/59 (91%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 396 taccacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||| Sbjct: 1136 taccacccctgaggcgcagcaccaggtgcagggt-ggactccttctggatgttgtagtc 1079
>dbj|AB089616.1| Pongo pygmaeus UbC gene for polyubiquitin C, complete cds Length = 2286 Score = 222 bits (112), Expect = 8e-55 Identities = 233/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| |||||||| | ||| || || ||| Sbjct: 2039 cggagcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtacgacca 1980 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| | | ||||||||| || |||||||| |||||| Sbjct: 1979 tcttccagctgctttccggcaaagatcaacctctgctggtcaggagggatgccttccttg 1920 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||||||||| ||||| || ||||||||| | ||| ||||| ||||||||| Sbjct: 1919 tcctggatctttgccttgacattctcaatggtgtcactgggctcgacctcgagggtgatg 1860 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 1859 gtcttgccagtgagtgtcttcacgaagatctgcatcccacctctgagacggagcaccagg 1800 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 ||||| ||||||| ||||||||||||||||| Sbjct: 1799 tgcag-ggtggactctttctggatgttgtagtc 1768 Score = 222 bits (112), Expect = 8e-55 Identities = 233/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 1583 cggagcaccaggtgcagggtagactctttctggatgttgtagtcagacagggtgcgacca 1524 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| | | ||||||||| || |||||||| |||||| Sbjct: 1523 tcttccagctgctttccggcaaagatcaacctctgctggtcaggagggatgccttccttg 1464 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || ||||||||||| || ||||| |||||||||||| | ||| ||||| |||||||| Sbjct: 1463 tcttggatctttgctttgacattctcgatggtgtcactgggctcgacctcaagggtgata 1404 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 1403 gtcttgccagtgagtgtcttcacgaagatctgcatcccacctctgagacggagcaccagg 1344 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 |||||| ||||||| ||||||||||||||||| Sbjct: 1343 tgcagag-tggactctttctggatgttgtagtc 1312 Score = 202 bits (102), Expect = 7e-49 Identities = 226/267 (84%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| || || ||||| |||||||| |||||||| | ||| ||||| ||||| || Sbjct: 2261 accaagtgcagagtggactctttctggatgttgtagtcagacagggtgcgtccatcttcc 2202 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 ||||| || ||||||||||| | | ||||||||| || || ||||| |||||||| ||| Sbjct: 2201 agctgtttcccagcaaagatcaacctctgctggtcaggaggaatgccttccttgtcttgg 2142 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||||||||| ||||| |||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 2141 atctttgccttgacattctcgatggtgtcactgggctccacctcgagggtgatggtcttg 2082 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||| ||||| ||||| |||||||||| |||||| Sbjct: 2081 cctgtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccaggtgcag- 2023 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||| ||||||||||||||||| Sbjct: 2022 ggtggactctttctggatgttgtagtc 1996 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| ||||| || | ||| ||||| ||| Sbjct: 443 cggagcaccaggtgcagggtagactctttctggatgttgtaatcagacagggtgcgacca 384 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| | | ||||||||| || || ||||| |||||| Sbjct: 383 tcttccagctgctttccggcaaagatcaacctctgctggtcaggaggaatgccttccttg 324 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || |||||||||||||| ||||| || ||||||||| | ||| ||||| ||||||||| Sbjct: 323 tcttggatctttgccttgacattctcaatggtgtcactgggctccacctcgagggtgatg 264 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 263 gtcttgccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccagg 204 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| ||||||| |||||||||||||| Sbjct: 203 tgcag-ggtggactctttctggatgttgta 175 Score = 184 bits (93), Expect = 2e-43 Identities = 226/270 (83%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| ||||| || | ||| ||||| ||| Sbjct: 671 cggagcaccaggtgcagggtagactctttctggatgttgtaatcagacagggtgcgacca 612 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| | | ||||||||| || || ||||| |||||| Sbjct: 611 tcttccagctgctttcccgcaaagatcaacctctgctggtcaggaggaatgccttccttg 552 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || |||||||||||||| || || |||||||||||| | ||| ||||| ||||||||| Sbjct: 551 tcttggatctttgccttgacgttctcgatggtgtcactgggctccacctcgagggtgatg 492 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||| ||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 491 gtcttaccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccagg 432 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | ||||| |||||||||||||| Sbjct: 431 tgcag-ggtagactctttctggatgttgta 403 Score = 176 bits (89), Expect = 4e-41 Identities = 225/270 (83%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||| ||| ||||| ||||| |||||||| |||||||| | || ||||| ||||| Sbjct: 1124 agcaccaggtgcagggtagactctttctggatgttgtagtcagagagggtgcgtccatct 1065 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || |||||||| || |||||||| | | ||||| || || || ||||||||||||||| Sbjct: 1064 tccagctgctttcccgcaaagatcaacctttgctgatcaggaggaatgccctccttgtcc 1005 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 ||||||||||| || ||||| || ||||| ||| | ||| ||||| ||||| |||||| Sbjct: 1004 tggatctttgctttgacattctcaatggtatcactgggctctacctcaagggtaatggtc 945 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgc 424 |||||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| |||| Sbjct: 944 ttgccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccaggtgc 885 Query: 425 aganttggactccttctggatgttgtagtc 454 ||| | ||||| ||||||||||||||||| Sbjct: 884 agag-tagactctttctggatgttgtagtc 856 Score = 176 bits (89), Expect = 4e-41 Identities = 225/270 (83%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| || || ||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 899 cggagcaccaggtgcagagtagactctttctggatgttgtagtcagacagggtgcgacca 840 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || ||||| || || |||||||| | | ||||||||| || || |||||||||||| Sbjct: 839 tcttccagctgttttccggcaaagatcaacctctgctggtcaggaggaatgccctccttg 780 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||||||||| || || || || |||||| | ||| ||||| || |||||| Sbjct: 779 tcctggatctttgccttgacgttctcaatagtgtcactaggctcgacctcaagagtgatg 720 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 719 gtcttgccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccagg 660 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | ||||| |||||||||||||| Sbjct: 659 tgcag-ggtagactctttctggatgttgta 631 Score = 174 bits (88), Expect = 2e-40 Identities = 227/273 (83%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| |||||||| | ||| || || ||| Sbjct: 1811 cggagcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtacgacca 1752 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || ||||| || || ||||| || | | ||||||||| || |||||||| ||||| Sbjct: 1751 tcttccagctgtttcccggcaaaaatcaacctctgctggtcaggagggatgccttcctta 1692 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || |||||||||||||| ||||| || ||||||||| | ||| ||||| ||||||||| Sbjct: 1691 tcttggatctttgccttgacattctcaatggtgtcactgggctccacctcgagggtgatg 1632 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||| ||||| |||||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 1631 gtcttaccagtcagggtcttcacgaagatctgcatcccacctctgagacggagcaccagg 1572 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 ||||| | ||||| ||||||||||||||||| Sbjct: 1571 tgcag-ggtagactctttctggatgttgtagtc 1540 Score = 159 bits (80), Expect = 1e-35 Identities = 225/273 (82%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| || || ||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 1355 cggagcaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcgacca 1296 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || ||||| || ||||||||||| | | ||||||||| || || ||||| |||||| Sbjct: 1295 tcttccagctgtttcccagcaaagatcaacctctgctggtcaggaggaatgccttccttg 1236 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || |||||||||||||| || || || || |||||| | ||| ||||| || |||||| Sbjct: 1235 tcttggatctttgccttgacgttctcaatagtgtcactaggctccacctcgagagtgatg 1176 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 ||||| ||||| |||||||| |||||||||||||| ||||| ||||| || ||||||| | Sbjct: 1175 gtcttaccagtcagggtcttcacgaagatctgcatcccacctctgagacgaagcaccagg 1116 Query: 422 tgcaganttggactccttctggatgttgtagtc 454 ||||| | ||||| ||||||||||||||||| Sbjct: 1115 tgcag-ggtagactctttctggatgttgtagtc 1084 Score = 151 bits (76), Expect = 2e-33 Identities = 180/215 (83%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 |||||||||| ||| ||||| ||||| |||||||| ||||| || | ||| ||||| ||| Sbjct: 215 cggagcaccaggtgcagggtggactctttctggatgttgtaatcagacagggtgcgacca 156 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| | | ||||||||| || |||||||| ||||| Sbjct: 155 tcttccagctgctttccggcaaagatcaacctctgctggtcaggagggatgccttcctta 96 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 || |||||||||||||| ||||| |||||||||||| | ||| ||||| ||||||||| Sbjct: 95 tcttggatctttgccttgacattctcgatggtgtcactgggctccacctcgagggtgatg 36 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 ||||| ||||| || ||||| |||||||||||||| Sbjct: 35 gtcttaccagtcagagtcttcacgaagatctgcat 1
>ref|NM_138895.1| Rattus norvegicus polyubiquitin (Ubb), mRNA Length = 1115 Score = 222 bits (112), Expect = 8e-55 Identities = 233/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| ||||| |||||||| ||||| || | || |||||| Sbjct: 965 aggcggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcgg 906 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 905 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 846 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 845 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 786 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| ||| Sbjct: 785 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggacc 726 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || |||||||||||||||||||| Sbjct: 725 aggtgcagggtt-gactccttctggatgttgta 694 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| || | ||| ||||| ||||| |||||||| ||||| || | || |||||| Sbjct: 509 aggcggaggacaaggtgcagggttgactctttctggatgttgtaatcagagagggtgcgg 450 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 449 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 390 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 389 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 330 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| ||| Sbjct: 329 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggacc 270 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| || ||||| ||||||||||||||||| Sbjct: 269 aggtgcagggtt-gactctttctggatgttgtagtc 235 Score = 206 bits (104), Expect = 5e-50 Identities = 231/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 737 aggcggaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 678 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 677 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 618 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 617 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 558 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| || Sbjct: 557 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggaca 498 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 497 aggtgcagggtt-gactctttctggatgttgta 466 Score = 172 bits (87), Expect = 6e-40 Identities = 185/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| ||||| |||||||| |||||||| | || |||||| Sbjct: 281 aggcggaggaccaggtgcagggttgactctttctggatgttgtagtcagagagggtgcgg 222 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 221 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 162 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 161 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 102 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||| ||||| Sbjct: 101 atggtcttgccggtcagggtcttcacgaagatttgcat 64
>dbj|D16554.1|RATPOLYU Rattus norvegicus mRNA for polyubiquitin, complete cds, four repetitive ubiquitins in tandem Length = 1115 Score = 222 bits (112), Expect = 8e-55 Identities = 233/273 (85%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| ||||| |||||||| ||||| || | || |||||| Sbjct: 965 aggcggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcgg 906 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 905 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 846 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 845 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 786 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| ||| Sbjct: 785 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggacc 726 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || |||||||||||||||||||| Sbjct: 725 aggtgcagggtt-gactccttctggatgttgta 694 Score = 212 bits (107), Expect = 7e-52 Identities = 234/276 (84%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| || | ||| ||||| ||||| |||||||| ||||| || | || |||||| Sbjct: 509 aggcggaggacaaggtgcagggttgactctttctggatgttgtaatcagagagggtgcgg 450 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 449 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 390 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 389 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 330 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| ||| Sbjct: 329 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggacc 270 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| || ||||| ||||||||||||||||| Sbjct: 269 aggtgcagggtt-gactctttctggatgttgtagtc 235 Score = 206 bits (104), Expect = 5e-50 Identities = 231/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 737 aggcggaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 678 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 677 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 618 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 617 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 558 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| || ||||| |||||||| || Sbjct: 557 atggtcttgccggtcagggtcttcacgaagatctgcatgccgcccctcaggcggaggaca 498 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 497 aggtgcagggtt-gactctttctggatgttgta 466 Score = 172 bits (87), Expect = 6e-40 Identities = 185/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 |||||||| |||| ||| ||||| ||||| |||||||| |||||||| | || |||||| Sbjct: 281 aggcggaggaccaggtgcagggttgactctttctggatgttgtagtcagagagggtgcgg 222 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || ||||||||||| Sbjct: 221 ccatcttccagctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctct 162 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 161 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 102 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||| ||||| Sbjct: 101 atggtcttgccggtcagggtcttcacgaagatttgcat 64
>gb|L13783.1|BVDP125A Bovine viral diarrhea virus p125 protein gene, partial cds Length = 3163 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || |||||||||||||| |||||||| | ||| ||||| Sbjct: 1485 gaggcggaggaccaggtgcagagtggactccttctggatgttgtagtcagacagggtgcg 1426 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1425 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1366 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1365 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1306 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1305 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1246 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||||||| ||||||| ||||||||||||||||| Sbjct: 1245 caggtgcagag-tggactctttctggatgttgtagtc 1210 Score = 190 bits (96), Expect = 3e-45 Identities = 211/250 (84%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| || || ||||| |||||||| |||||||| | ||| ||||| Sbjct: 1257 gaggcggaggaccaggtgcagagtggactctttctggatgttgtagtcagacagggtgcg 1198 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 1197 gccatcttccagctgtttcccggcaaagatcagcctctgctggtctggggggatgccctc 1138 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||| |||||||| ||||| || || |||||||||||| | ||| ||||||||||| Sbjct: 1137 tttgtcttggatcttggccttgacgttctcgatggtgtcactgggctccacctccagggt 1078 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1077 gatggtcttgccggtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 1018 Query: 418 cangtgcaga 427 || ||||||| Sbjct: 1017 caggtgcaga 1008 Score = 69.9 bits (35), Expect = 7e-09 Identities = 52/57 (91%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 398 ccacccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 1493 ccacctctgaggcggaggaccaggtgcagag-tggactccttctggatgttgtagtc 1438
>gb|M18159.1|PIGUBP Pig poly-ubiquitin mRNA, 3' end Length = 832 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 525 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcagacagggtgcg 466 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| || |||||||| || | ||||||||| || |||||||| || Sbjct: 465 cccatcttccagctgcttcccggcaaagatcagcctctgctggtctggggggatgccttc 406 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 |||||| |||||||| ||||| ||||| ||||||||||| | ||| || |||||||| Sbjct: 405 cttgtcttggatcttcgccttgacattctcgatggtgtcgctgggctccacttccagggt 346 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||||||||| ||||| | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 345 gatggtcttaccagtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 286 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 285 caggtgcag-ggtggactccttctggatgttgtagtc 250 Score = 222 bits (112), Expect = 8e-55 Identities = 236/277 (85%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 297 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcagacagggtgcg 238 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| || |||||||| || | ||||||||| || |||||||| || Sbjct: 237 cccatcttccagctgcttcccggcaaagatcagcctctgctggtctggggggatgccttc 178 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 |||||| |||||||| ||||| ||||| ||||||||||| | ||| || |||||||| Sbjct: 177 cttgtcttggatcttcgccttgacattctcgatggtgtcgctgggctccacttccagggt 118 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 ||||||||| ||||| | |||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 117 gatggtcttaccagtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggac 58 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| ||||||||||||||||||||||||| Sbjct: 57 caggtgcag-ggtggactccttctggatgttgtagtc 22 Score = 218 bits (110), Expect = 1e-53 Identities = 228/267 (85%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||||||| ||||| |||||||||||||| |||||||| | ||| ||||| ||||| || Sbjct: 743 accaagtgcagggtggactccttctggatgttgtagtcagacagggtgcgcccatcttcc 684 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || |||||||| || | ||||||||| || |||||||| |||||||||||| Sbjct: 683 agctgcttcccggcaaagatcagcctctgctggtctggggggatgccttccttgtcctgg 624 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| ||||| || || ||||||||||| | ||| || ||||||||||||||||| Sbjct: 623 atcttcgccttgacgttctcgatggtgtcgctgggctccacttccagggtgatggtctta 564 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 ||||| | |||||| |||||||||||||| ||||| ||||||||||| |||| |||||| Sbjct: 563 ccagtcaaggtcttcacgaagatctgcatcccacctctgaggcggaggaccaggtgcag- 505 Query: 428 nttggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 504 ggtggactccttctggatgttgtagtc 478 Score = 61.9 bits (31), Expect = 2e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| ||| ||||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 69 gaggcggaggaccaggtgcagggtggactccttctggatgttgtagtcagacagggtgcg 10 Query: 238 gccatc 243 ||||| Sbjct: 9 cccatc 4
>emb|AJ223328.1|NTAJ3328 Nicotiana tabacum TUQG2 gene, complete CDS Length = 2074 Score = 220 bits (111), Expect = 3e-54 Identities = 176/198 (88%) Strand = Plus / Minus Query: 205 ctccttctggatnttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 264 |||||||||||| |||||||| ||| || ||||| ||||||||||||||||||||||| Sbjct: 1333 ctccttctggatgttgtagtcgctcagggtacggccgtcctcaagctgcttaccagcaaa 1274 Query: 265 gatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgccttcacatt 324 ||| || ||||||||||| || || || |||||||| ||||||||||| | ||||||||| Sbjct: 1273 gataagacgctgctggtcaggaggaataccctccttatcctggatcttggacttcacatt 1214 Query: 325 gtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagggtcttaac 384 |||||||||||| |||||||| ||||||| ||||||||||||||||| |||||||| || Sbjct: 1213 gtcgatggtgtctgatgactcgacctccaaagtgatggtcttgccagtaagggtcttgac 1154 Query: 385 gaagatctgcataccacc 402 |||||||||||||||||| Sbjct: 1153 gaagatctgcataccacc 1136 Score = 206 bits (104), Expect = 5e-50 Identities = 196/227 (86%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| |||||||| || | |||||| || |||||||||||| ||||| || | Sbjct: 857 ccaccacgaaggcggaggacgaggtggagagtgctctccttctggatgttgtaatcagaa 798 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| ||||||||||| | ||||||||||| || ||| Sbjct: 797 agggtgcggccatcctcgagctgcttgccagcaaagatcaaacgctgctggtcaggaggg 738 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||| ||||| | |||||||||||||||||| || || ||||||||| Sbjct: 737 atgccctccttgtcctgaatcttggacttcacattgtcgatggtatcggaagactcaacc 678 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 || ||||||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 677 tcgagggtgatggtcttgccggtgagggtcttgacgaagatttgcat 631 Score = 184 bits (93), Expect = 2e-43 Identities = 141/157 (89%) Strand = Plus / Minus Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| || ||| Sbjct: 1080 agagtgcggccatcctcgagctgcttaccagcgaagatcaggcgctgctggtcaggaggg 1021 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| | ||| |||||||||||||| || || ||||| ||| Sbjct: 1020 atgccctccttgtcctggatcttcgacttaacattgtcgatggtatcggaggactcgacc 961 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacga 386 || || |||||||||||||| ||||||||||| |||| Sbjct: 960 tcaagagtgatggtcttgccggtgagggtcttgacga 924 Score = 123 bits (62), Expect = 5e-25 Identities = 196/241 (81%) Strand = Plus / Minus Query: 162 cttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgt 221 ||||| |||||||||| || || |||||||||||||| || |||||||||||| |||| Sbjct: 1604 cttactggccaccacgaagacgaagcaccaagtggagagtgctctccttctggatgttgt 1545 Query: 222 agtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggt 281 |||| || ||||| || || || |||||||||||||||||||| || |||||||||| Sbjct: 1544 agtcgctcaaggtgcgaccgtcttcgagctgcttaccagcaaagataagacgctgctggt 1485 Query: 282 ccggtgggatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatg 341 | || ||||| |||||||| ||||| ||||| | ||| || ||||| ||||| || | Sbjct: 1484 caggagggataccctccttatcctgaatcttggacttgacgttgtcaatggtatcgctag 1425 Query: 342 actcaacctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccac 401 | || || || || || || ||||||||||| || ||||||||||| ||||||||||||| Sbjct: 1424 attccacttcgagagtaatcgtcttgccagtcagagtcttaacgaaaatctgcataccac 1365 Query: 402 c 402 | Sbjct: 1364 c 1364 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 ctccttctggatgttgtagtc 454 ||||||||||||||||||||| Sbjct: 1561 ctccttctggatgttgtagtc 1541 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 ctccttctggatgttgtagtc 454 ||||||||||||||||||||| Sbjct: 1333 ctccttctggatgttgtagtc 1313
>dbj|AB071067.1| Macaca fascicularis testis cDNA clone:QtsA-16192, similar to human ubiquitin B precursor ( UBB ), mRNA, NM_018955.1 Length = 883 Score = 220 bits (111), Expect = 3e-54 Identities = 235/276 (85%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| |||||||| | ||||||||| Sbjct: 710 aggcgcaggaccaggtgcagggttgactccttctggatgttgtagtcagaaagagtgcgg 651 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 650 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttct 591 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || || |||||||| ||||||||||| |||||||||||| | ||| |||||||||||| Sbjct: 590 ttatcttggatcttggccttcacattttcgatggtgtcactgggctccacctccagggtg 531 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || ||||| || |||||||||||||||||||| || ||||| || ||| Sbjct: 530 atggtcttgccggtcagggttttcacgaagatctgcataccacctctcaggcgcaggacc 471 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||||||||||||||||||||| Sbjct: 470 aggtgcag-ggtcgactccttctggatgttgtagtc 436 Score = 220 bits (111), Expect = 3e-54 Identities = 235/276 (85%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| |||||||||||||||||||| |||||||| | ||||||||| Sbjct: 482 aggcgcaggaccaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcgg 423 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || ||||||||||| | ||||||||| || |||||||| || Sbjct: 422 ccatcttccagctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttct 363 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| ||||||||||| |||||||||||| | ||| || ||||||||| Sbjct: 362 ttatcctggatcttggccttcacattttcgatggtgtcactgggctccacttccagggtg 303 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||||||||| || ||||| || || Sbjct: 302 atggtcttgccggtcagggtcttcacgaagatctgcataccacctctcaggcgcaggaca 243 Query: 419 angtgcaganttggactccttctggatgttgtagtc 454 | |||||| | ||||| ||||||||||||||||| Sbjct: 242 aggtgcag-ggtcgactctttctggatgttgtagtc 208 Score = 176 bits (89), Expect = 4e-41 Identities = 172/200 (86%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||||||||| |||||||| |||||||| | |||||||||||||| || |||||||| Sbjct: 236 agggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttccagctgcttg 177 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 || ||||||||||| | ||||||||| || || ||||| ||||| |||||||| || ||| Sbjct: 176 cctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctggattttggcc 117 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||| |||||||||||| | ||| ||||| ||||||||||||||||| || ||| Sbjct: 116 ttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttgccggtcagg 57 Query: 377 gtcttaacgaagatctgcat 396 ||||| |||||||||||||| Sbjct: 56 gtcttcacgaagatctgcat 37
>gb|L31941.1|RICRMA630 Oryza sativa (clone rma630) ribosomal protein-linked ubiquitin mRNA, complete cds Length = 634 Score = 218 bits (110), Expect = 1e-53 Identities = 201/229 (87%), Gaps = 2/229 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| |||||||||||||| ||||||||| |||||||||||||| |||||||| || Sbjct: 237 gccaccgcggaggcggagcacgtggtggagggtggactccttctggatgttgtagtcggc 178 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || |||||||||||||| |||||||| || || ||||||| ||||||||||||||| || Sbjct: 177 gagggtgcggccatcctcgagctgcttgccggcgaagatgaagcgctgctggtccggggg 118 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgt-cagatgactcaa 347 ||| || ||||||||||||||||| |||||||| ||||||||||||| | || ||||| | Sbjct: 117 gatcccttccttgtcctggatcttggccttcacgttgtcgatggtgtgccga-gactcca 59 Query: 348 cctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||| ||||||||||| || || |||||||| |||||||||||||| Sbjct: 58 cctccagcgtgatggtcttccccgtcagggtcttcacgaagatctgcat 10 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 205 tggactccttctggatgttgtagtc 181
>gb|DQ216248.1| Taeniopygia guttata clone 0058P0029E05 ubiquitin C variant 8-like mRNA, complete sequence Length = 1378 Score = 216 bits (109), Expect = 5e-53 Identities = 242/286 (84%), Gaps = 1/286 (0%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| | |||||| ||||||| ||| || || |||||||||||||| |||||||| | Sbjct: 1208 gccacccctgaggcgcagcaccaggtgcagagttgactccttctggatgttgtagtcgga 1149 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || ||||| ||||| || |||||||| ||||| || || || | ||||||||| || || Sbjct: 1148 gagggtgcgcccatcttccagctgcttgccagcgaaaatcagcctctgctggtcaggagg 1089 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||| || ||||||||||||||||| ||||| ||||| |||||||||||| | |||||| Sbjct: 1088 gataccttccttgtcctggatcttggccttgacattctcgatggtgtcactgggctcaac 1029 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgag 408 ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1028 ttccagggtgatggtcttgccagtcagggtcttcacgaagatctgcatcccacccctgag 969 Query: 409 gcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 ||| || || | |||||| |||| |||||||||||||||||||| Sbjct: 968 gcgcaggacaaggtgcag-ggtggattccttctggatgttgtagtc 924 Score = 216 bits (109), Expect = 5e-53 Identities = 221/258 (85%), Gaps = 1/258 (0%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| || ||||||||||| |||||||| | || ||| || |||||||| ||||||||| Sbjct: 952 agggtggattccttctggatgttgtagtcggacaaagtacgaccatcctccagctgctta 893 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| || || || | ||||||||| ||||| ||||| ||||||||||||||||| ||| Sbjct: 892 ccagcgaaaatcagcctctgctggtctggtggaatgccttccttgtcctggatcttggcc 833 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 |||||||| || ||||||||| | ||| ||||| || |||||||||||||| || ||| Sbjct: 832 ttcacattttcaatggtgtcactgggctccacctcaagagtgatggtcttgccggtcagg 773 Query: 377 gtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaganttggactc 436 ||||| |||||||||||||| |||||||||||||| ||||||| |||||| |||| || Sbjct: 772 gtcttgacgaagatctgcatcccacccctgaggcgcagcaccaggtgcag-ggtggattc 714 Query: 437 cttctggatgttgtagtc 454 |||||||||||||||||| Sbjct: 713 cttctggatgttgtagtc 696 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| || ||||||||||| |||||||| | ||| ||||| Sbjct: 743 gaggcgcagcaccaggtgcagggtggattccttctggatgttgtagtcagacagggtgcg 684 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||| || |||||||| ||||||||||| || | ||||||||| || || ||||| || Sbjct: 683 gccatcttccagctgcttgccagcaaagatcagcctctgctggtcggggggaatgccttc 624 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| || || |||||||||||| | ||||| |||||||| Sbjct: 623 cttgtcctggatcttggccttgacgttctcgatggtgtcactgggctcaagttccagggt 564 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || |||||||| |||||||||||||| ||||| ||||||| ||||| Sbjct: 563 gatggtcttgccggtcagggtcttgacgaagatctgcatcccacctttgaggcgcagcac 504 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || |||||| |||| ||||||||||| |||||||| Sbjct: 503 caggtgcag-ggtggattccttctggatattgtagtc 468 Score = 182 bits (92), Expect = 7e-43 Identities = 187/219 (85%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| |||||| || ||||| |||||||| |||||||| | || ||||| Sbjct: 287 gaggcgcagcaccaggtggagagttgactctttctggatgttgtagtcggagagggtgcg 228 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 |||||||| |||||||| ||||||||||| || | ||||||||| || || |||||||| Sbjct: 227 cccatcctccagctgcttgccagcaaagatcagcctctgctggtctgggggaatgccctc 168 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| ||||| || ||||||||| | ||| ||||| ||||| Sbjct: 167 cttgtcctggatcttggccttgacattttcaatggtgtcactgggctccacctcaagggt 108 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||||||| |||||||| || ||||||||||| Sbjct: 107 gatggtcttgccagtcagggtcttcacaaagatctgcat 69 Score = 174 bits (88), Expect = 2e-40 Identities = 230/277 (83%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 |||||| ||||||| ||| ||||| || ||||||||||| |||||||| | ||| ||||| Sbjct: 515 gaggcgcagcaccaggtgcagggtggattccttctggatattgtagtctgacagggtgcg 456 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||||||||||||||| || | ||||| ||| || || || || || Sbjct: 455 cccatcttccagctgcttaccagcaaagatcagcctctgcttgtcaggaggaataccttc 396 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||||||| ||||| ||||| |||||||||||| | ||| ||||| ||||| Sbjct: 395 cttgtcctggatcttggccttgacattctcgatggtgtcactgggctccacctcaagggt 336 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||| | || | |||||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 335 gatgccccccccgctcagggtcttcacaaagatctgcatcccacccctgaggcgcagcac 276 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||| ||| || ||||| ||||||||||||||||| Sbjct: 275 caggtggagagtt-gactctttctggatgttgtagtc 240
>ref|NM_011664.2| Mus musculus ubiquitin B (Ubb), mRNA Length = 1167 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 998 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 939 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 938 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 879 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 878 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 819 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 818 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 759 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 758 tgcagggtt-gactccttctggatgttgta 730 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 773 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 714 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 713 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 654 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 653 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 594 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 593 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 534 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 533 aggtgcagggtt-gactctttctggatgttgta 502 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 542 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 483 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 482 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 423 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 422 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 363 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 362 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 303 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 302 tgcagggtt-gactccttctggatgttgta 274 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 317 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 258 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 257 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 198 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 197 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 138 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 137 atggtcttgccggtcagggtcttcacgaagatctgcat 100
>emb|X59943.1|DMUBEX D.melanogaster gene for ubiquitin extension protein Length = 2699 Score = 216 bits (109), Expect = 5e-53 Identities = 198/228 (86%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| |||||||| |||||||| || || ||||||||||| || |||||||| | | Sbjct: 1888 ccaccacgcaggcggagtaccaagtgcagtgtggactccttctgaatgttgtagtcggac 1829 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||||||||||||||| |||||||| || || ||||| || |||||||| || || || Sbjct: 1828 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 1769 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| | ||| ||| Sbjct: 1768 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 1709 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcata 397 |||| ||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 1708 tccaaggtgatggtcttgccggtgagggttttcacgaagatctgcata 1661 Score = 44.1 bits (22), Expect = 0.39 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| |||| |||||| | |||||||||||| ||||||||||| Sbjct: 1879 aggcggagtaccaagtgcagtgt-ggactccttctgaatgttgtagtc 1833
>emb|X67957.1|AMUBIQMRP A.majus mRNA for ubiquitin (partial) Length = 1094 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 |||||||| || || |||||||| ||||| || |||||||| |||| ||||| |||||| Sbjct: 643 agcaccaaatgcagagtcgactctttctgaatgttgtagtcggccaaggtgcgaccatcc 584 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 ||||||||||||||||| |||||||| | ||||||||| |||||||| |||||||||||| Sbjct: 583 tcaagctgcttaccagcgaagatgagcctctgctggtctggtgggatcccctccttgtcc 524 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 |||||||| ||||| |||||||| |||||||| || ||| ||||| ||||| |||||| Sbjct: 523 tggatcttggccttgacattgtcaatggtgtcggagctctcgacctcgagggtaatggtc 464 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgc 424 ||||| || | |||||| || ||||| ||||||||||| | ||| ||||| |||| ||| Sbjct: 463 ttgccggtcaaggtcttcacaaagatttgcataccaccacggagacggaggaccaagtga 404 Query: 425 aganttggactccttctggatgttgtagtc 454 || ||||||||||||||||||||||||| Sbjct: 403 ag-ggtggactccttctggatgttgtagtc 375 Score = 210 bits (106), Expect = 3e-51 Identities = 201/233 (86%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 430 ccaccacggagacggaggaccaagtgaagggtggactccttctggatgttgtagtcagcc 371 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 | |||||||||||||||||||||||| ||||| ||||| || | |||||| || |||||| Sbjct: 370 aaagtgcggccatcctcaagctgctttccagcgaagataagcctctgctgatctggtggg 311 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||| || || ||||| |||||||| ||||| || || ||| ||| Sbjct: 310 attccctccttgtcctgaattttggccttgacattgtcaatggtatccgagctctcgacc 251 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcataccacc 402 || ||||||||||||||||| || || ||||| || ||||||||||||||||| Sbjct: 250 tcaagggtgatggtcttgccggtcagagtcttcacaaagatctgcataccacc 198 Score = 206 bits (104), Expect = 5e-50 Identities = 196/227 (86%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 ||||||||||| ||||| || | ||| || ||||||||||||||||| |||||||| ||| Sbjct: 886 ccaccacggagacggaggacaaggtgaagagtcgactccttctggatattgtagtcggcc 827 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || || || ||||||||||||||||||||||| |||||||| | |||||||||||||||| Sbjct: 826 agggtacgaccatcctcaagctgcttaccagcgaagatgagcctctgctggtccggtggg 767 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 || |||||||||||||| ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 766 ataccctccttgtcctgaatcttagccttcacattgtcaatggtgtcggagctctcaacc 707 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 |||| || || ||||| ||||| | |||||| ||||| |||||||| Sbjct: 706 tccaaagtaatcgtcttcccagtcaaggtcttcacgaaaatctgcat 660 Score = 147 bits (74), Expect = 4e-32 Identities = 148/173 (85%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| || |||||||| || |||||||| |||| ||| ||||||||||| || ||||| Sbjct: 175 agggtggattccttctgaatgttgtagtcagccaaagtacggccatcctcgagttgcttt 116 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 ||||| |||||||| | ||||||||| || || ||||||||||||||||||||||| ||| Sbjct: 115 ccagcgaagatgagcctctgctggtctgggggaatgccctccttgtcctggatcttagcc 56 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgcc 369 ||||| ||||| || |||||||| ||| ||||| ||||||||||||||||| Sbjct: 55 ttcacgttgtcaatagtgtcagagctctcgacctcaagggtgatggtcttgcc 3
>emb|X53059.1|DMUB52AA Fruit fly mRNA for ubiquitin 52-AA extension protein Length = 563 Score = 216 bits (109), Expect = 5e-53 Identities = 198/228 (86%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||| |||||||| |||||||| || || ||||||||||| || |||||||| | | Sbjct: 261 ccaccacgcaggcggagtaccaagtgcagtgtggactccttctgaatgttgtagtcggac 202 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 ||||||||||||||||| |||||||| || || ||||| || |||||||| || || || Sbjct: 201 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 142 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| | ||| ||| Sbjct: 141 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 82 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcata 397 |||| ||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 81 tccaaggtgatggtcttgccggtgagggttttcacgaagatctgcata 34 Score = 44.1 bits (22), Expect = 0.39 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 407 aggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||| |||| |||||| | |||||||||||| ||||||||||| Sbjct: 252 aggcggagtaccaagtgcagtgt-ggactccttctgaatgttgtagtc 206
>gb|BC100341.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:117670 IMAGE:30787432), complete cds Length = 1145 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 952 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 893 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 892 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 833 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 832 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 773 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 772 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 713 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 712 tgcagggtt-gactccttctggatgttgta 684 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 727 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 668 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 667 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 608 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 607 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 548 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 547 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 488 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 487 aggtgcagggtt-gactctttctggatgttgta 456 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 496 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 437 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 436 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 377 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 376 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 317 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 316 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 257 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 256 tgcagggtt-gactccttctggatgttgta 228 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 271 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 212 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 211 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 152 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 151 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 92 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 91 atggtcttgccggtcagggtcttcacgaagatctgcat 54
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 121107 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 121166 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 121167 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 121226 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 121227 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 121286 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 121287 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 121346 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 121347 tgcagggtt-gactccttctggatgttgta 121375 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 121332 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 121391 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 121392 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 121451 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 121452 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 121511 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 121512 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 121571 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 121572 aggtgcagggtt-gactctttctggatgttgta 121603 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 121563 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 121622 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 121623 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 121682 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 121683 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 121742 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 121743 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 121802 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 121803 tgcagggtt-gactccttctggatgttgta 121831 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Plus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 121788 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 121847 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 121848 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 121907 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 121908 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 121967 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 121968 atggtcttgccggtcagggtcttcacgaagatctgcat 122005 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 297 ccttgtcctggatctttgccttcac 321 ||||||||||| ||||||||||||| Sbjct: 80745 ccttgtcctggctctttgccttcac 80769
>gb|BC114001.1| Bos taurus polyubiquitin, mRNA (cDNA clone MGC:133799 IMAGE:8064312), complete cds Length = 1093 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 690 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggcca 631 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 630 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 571 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 570 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 511 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| ||||||||||||||||||||||| || ||||| |||| | Sbjct: 510 gtcttgccggtcagggtcttcacgaagatctgcataccacccctcagacggaggaccagg 451 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | ||||| |||||||||||||| Sbjct: 450 tgcag-ggtcgactctttctggatgttgta 422 Score = 204 bits (103), Expect = 2e-49 Identities = 224/264 (84%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||||| || Sbjct: 912 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 853 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 852 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 793 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| |||||||| || |||||||||||| | ||| || |||||||||||||||||| Sbjct: 792 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 733 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| ||||||||||||||||||||||| || ||||| |||| |||||| Sbjct: 732 ccggtcagggtcttcacgaagatctgcataccacccctcagacggaggaccaggtgcag- 674 Query: 428 nttggactccttctggatgttgta 451 | ||||| |||||||||||||| Sbjct: 673 ggtcgactctttctggatgttgta 650 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 462 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggcca 403 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||||||||| Sbjct: 402 tcttccagctgcttgccggcaaagatgagcctctgctggtcggggggaatgccctcctta 343 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| || ||||| |||||| Sbjct: 342 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacttccagtgtgatg 283 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| ||||| ||||||||||||||||| || ||||| |||| | Sbjct: 282 gtcttgccggtcagggtcttcacgaaaatctgcataccacccctcagacggaggaccagg 223 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | ||||| |||||||||||||| Sbjct: 222 tgcag-ggtcgactctttctggatgttgta 194 Score = 174 bits (88), Expect = 2e-40 Identities = 183/215 (85%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 234 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggcca 175 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 174 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 115 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 114 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 55 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||| || ||||| || |||||||||||||| Sbjct: 54 gtcttgccggtcagggttttcacgaagatctgcat 20
>dbj|AK132747.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922505B09 product:ubiquitin B, full insert sequence Length = 1166 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 998 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 939 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 938 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 879 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 878 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 819 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 818 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 759 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 758 tgcagggtt-gactccttctggatgttgta 730 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 773 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 714 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 713 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 654 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 653 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 594 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 593 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 534 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 533 aggtgcagggtt-gactctttctggatgttgta 502 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 542 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 483 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 482 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 423 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 422 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 363 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 362 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 303 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 302 tgcagggtt-gactccttctggatgttgta 274 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 317 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 258 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 257 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 198 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 197 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 138 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 137 atggtcttgccggtcagggtcttcacgaagatctgcat 100
>gb|AF386524.1|AF386524 Pyrus communis ubiquitin extension protein (UBI) mRNA, complete cds Length = 651 Score = 216 bits (109), Expect = 5e-53 Identities = 198/228 (86%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 |||||| |||||||||||||||| |||||| || |||||||||||||| |||||||| || Sbjct: 233 gccaccgcggaggcggagcaccaggtggagagtggactccttctggatgttgtagtcggc 174 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 || || ||||| ||||| |||||||| || || ||||||||||||||||||||||| || Sbjct: 173 gagggttcggccgtcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggg 114 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 ||||||||||||||| |||||||| ||||| |||||||| ||||| || || ||||| || Sbjct: 113 gatgccctccttgtcttggatcttggccttgacattgtcaatggtatcggaggactcgac 54 Query: 349 ctccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 ||| ||||| |||||||| || || ||||| || |||||||||||||| Sbjct: 53 ctctagggttatggtcttacccgttagggttttcacgaagatctgcat 6 Score = 61.9 bits (31), Expect = 2e-06 Identities = 45/49 (91%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 406 gaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| ||| ||| | |||||||||||||||||||||||| Sbjct: 224 gaggcggagcaccaggtggagagt-ggactccttctggatgttgtagtc 177
>dbj|AK010625.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410036G24 product:ubiquitin B, full insert sequence Length = 1160 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 998 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 939 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 938 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 879 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 878 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 819 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 818 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 759 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 758 tgcagggtt-gactccttctggatgttgta 730 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 773 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 714 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 713 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 654 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 653 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 594 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 593 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 534 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 533 aggtgcagggtt-gactctttctggatgttgta 502 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 542 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 483 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 482 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 423 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 422 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 363 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 362 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 303 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 302 tgcagggtt-gactccttctggatgttgta 274 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 317 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 258 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 257 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 198 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 197 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 138 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 137 atggtcttgccggtcagggtcttcacgaagatctgcat 100
>dbj|AK010413.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410005G06 product:polyubiquitin 4, full insert sequence Length = 1165 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 999 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 940 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 939 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 880 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 879 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 820 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 819 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 760 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 759 tgcagggtt-gactccttctggatgttgta 731 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 774 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 715 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 714 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 655 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 654 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 595 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 594 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 535 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 534 aggtgcagggtt-gactctttctggatgttgta 503 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 543 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 484 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 483 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 424 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 423 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 364 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 363 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 304 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 303 tgcagggtt-gactccttctggatgttgta 275 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 318 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 259 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 258 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 199 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 198 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 139 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 138 atggtcttgccggtcagggtcttcacgaagatctgcat 101
>dbj|AK003190.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001L13 product:ubiquitin B, full insert sequence Length = 932 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 770 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 711 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 710 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 651 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 650 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 591 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 590 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 531 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 530 tgcagggtt-gactccttctggatgttgta 502 Score = 206 bits (104), Expect = 5e-50 Identities = 231/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 545 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 486 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 485 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 426 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 425 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 366 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 ||||||||||| || |||||||| |||||||||||||| ||||| || ||||| || ||| Sbjct: 365 atggtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggacc 306 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || |||||||||||||||||||| Sbjct: 305 aggtgcagggtt-gactccttctggatgttgta 274 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 317 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 258 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 257 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 198 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 197 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 138 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 137 atggtcttgccggtcagggtcttcacgaagatctgcat 100
>dbj|AK088453.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018A04 product:ubiquitin polyprotein (heat shock related) (fragment) homolog [Gallus gallus], full insert sequence Length = 704 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 543 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 484 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 483 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 424 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||| Sbjct: 423 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccagggtgatg 364 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| |||||||| || ||||| |||| | Sbjct: 363 gtcttgccggtcagggtcttcacgaagatctgcatgccacccctcagacggaggaccagg 304 Query: 422 tgcaganttggactccttctggatgttgta 451 | ||| || ||||| |||||||||||||| Sbjct: 303 tccagggtt-gactctttctggatgttgta 275 Score = 145 bits (73), Expect = 1e-31 Identities = 168/200 (84%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| ||||| |||||||| ||||| || | || ||||||||||| || |||||||| Sbjct: 300 agggttgactctttctggatgttgtaatcagagagggtgcggccatcttccagctgcttg 241 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 || |||||||| | | ||||||||| || ||||||||||| || ||||||||||| ||| Sbjct: 240 ccggcaaagatcaccctctgctggtcaggggggatgccctctttatcctggatcttggcc 181 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 ||||| || |||||||||||| | ||| ||||| ||||||||||||||||| || ||| Sbjct: 180 ttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttgccggtcagg 121 Query: 377 gtcttaacgaagatctgcat 396 ||||| |||||||||||||| Sbjct: 120 gtcttcacgaagatctgcat 101
>dbj|AK013027.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810407D23 product:ubiquitin B, full insert sequence Length = 1167 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 998 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 939 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 938 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 879 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 878 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 819 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 818 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 759 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 758 tgcagggtt-gactccttctggatgttgta 730 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 773 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 714 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 713 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 654 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 653 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 594 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 593 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 534 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 533 aggtgcagggtt-gactctttctggatgttgta 502 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 542 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 483 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 482 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 423 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 422 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 363 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 362 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 303 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 302 tgcagggtt-gactccttctggatgttgta 274 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 317 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 258 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 257 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 198 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 197 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 138 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 137 atggtcttgccggtcagggtcttcacgaagatctgcat 100
>gb|DQ363465.1| Ictalurus punctatus clone C153BB02 ubiquitin C mRNA, partial cds Length = 579 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||| |||||| || |||||||||||||| |||||||| | ||| ||||||||||| Sbjct: 329 agcaccaggtggagagtggactccttctggatgttgtagtcagacagggtgcggccatct 270 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || |||||||| || |||||||| || | ||||||||| || || ||||| || |||||| Sbjct: 269 tccagctgcttgccggcaaagatcagcctctgctggtctgggggaatgccttctttgtcc 210 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 ||||| || ||||| ||||| || ||||||||| | ||||||||| |||||||||||| Sbjct: 209 tggattttggccttgacattctcaatggtgtcactgggctcaacctcaagggtgatggtc 150 Query: 365 ttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgc 424 ||||| || ||||| || ||||||||||||||||||||||| || || ||||||| ||| Sbjct: 149 ttgccggtcagggttttcacgaagatctgcataccacccctcagacgcagcaccaggtgg 90 Query: 425 aganttggactccttctggatgttgtagtc 454 ||| ||||||||||||||||||||||||| Sbjct: 89 agag-tggactccttctggatgttgtagtc 61 Score = 214 bits (108), Expect = 2e-52 Identities = 235/277 (84%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 178 gaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcg 237 ||||||||| |||| |||||| || |||||||||||||| |||||||| | ||| ||||| Sbjct: 564 gaggcggagaaccaggtggagagtggactccttctggatgttgtagtcagacagggtgcg 505 Query: 238 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctc 297 ||||| || |||||||| ||||||||||| || | ||||||||| || || ||||| || Sbjct: 504 accatcttccagctgcttgccagcaaagatcagcctctgctggtctgggggaatgccttc 445 Query: 298 cttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggt 357 ||||||||||| || ||||| ||||| | ||||||||| | ||||||||| ||||| Sbjct: 444 tttgtcctggattttggccttgacattcccaatggtgtcactgggctcaacctcaagggt 385 Query: 358 gatggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcac 417 |||||||||||| || ||||| || ||||||||||||||||||||||| || || ||||| Sbjct: 384 gatggtcttgccggtcagggttttcacgaagatctgcataccacccctcagacgcagcac 325 Query: 418 cangtgcaganttggactccttctggatgttgtagtc 454 || ||| ||| ||||||||||||||||||||||||| Sbjct: 324 caggtggagag-tggactccttctggatgttgtagtc 289 Score = 85.7 bits (43), Expect = 1e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||| |||||| || |||||||||||||| |||||||| | ||| ||||||||||| Sbjct: 101 agcaccaggtggagagtggactccttctggatgttgtagtcagacagggtgcggccatct 42 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtc 282 || |||||||| || |||||||| || | ||||||||| Sbjct: 41 tccagctgcttgccggcaaagatcagcctctgctggtc 4 Score = 63.9 bits (32), Expect = 4e-07 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 401 cccctgaggcggagcaccangtgcaganttggactccttctggatgttgtagtc 454 |||||||||||||| |||| ||| ||| ||||||||||||||||||||||||| Sbjct: 569 cccctgaggcggagaaccaggtggagag-tggactccttctggatgttgtagtc 517
>dbj|AK012443.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700055N04 product:ubiquitin B, full insert sequence Length = 1166 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 999 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 940 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 939 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 880 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 879 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 820 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 819 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 760 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 759 tgcagggtt-gactccttctggatgttgta 731 Score = 206 bits (104), Expect = 5e-50 Identities = 231/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 774 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 715 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 714 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 655 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 654 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 595 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || |||| ||| Sbjct: 594 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaagacc 535 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 534 aggtgcagggtt-gactctttctggatgttgta 503 Score = 196 bits (99), Expect = 4e-47 Identities = 223/264 (84%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||||| || Sbjct: 537 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 478 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || |||||||| || | ||||||||| || ||||||||||| || |||||| Sbjct: 477 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 418 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| |||||||| || |||||||||||| | ||| ||||||||||||||||||||| Sbjct: 417 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 358 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| |||||||||||||| ||||| || ||||| || |||| |||||| Sbjct: 357 ccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccaggtgcagg 298 Query: 428 nttggactccttctggatgttgta 451 || |||||||||||||||||||| Sbjct: 297 gtt-gactccttctggatgttgta 275 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 318 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 259 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 258 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 199 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 198 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 139 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 138 atggtcttgccggtcagggtcttcacgaagatctgcat 101
>dbj|AK007273.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700124N12 product:ubiquitin B, full insert sequence Length = 1195 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 1029 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 970 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 969 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 910 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 909 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 850 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 849 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 790 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 789 tgcagggtt-gactccttctggatgttgta 761 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 804 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 745 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 744 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 685 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 684 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 625 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 624 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 565 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 564 aggtgcagggtt-gactctttctggatgttgta 533 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 573 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 514 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 513 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 454 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 453 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 394 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 393 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 334 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 333 tgcagggtt-gactccttctggatgttgta 305 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 348 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 289 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 288 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 229 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 228 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 169 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 168 atggtcttgccggtcagggtcttcacgaagatctgcat 131
>ref|NM_174133.2| Bos taurus polyubiquitin (LOC281370), mRNA Length = 1144 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 757 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggcca 698 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 697 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 638 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 637 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 578 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| ||||||||||||||||||||||| || ||||| |||| | Sbjct: 577 gtcttgccggtcagggtcttcacgaagatctgcataccacccctcagacggaggaccagg 518 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | ||||| |||||||||||||| Sbjct: 517 tgcag-ggtcgactctttctggatgttgta 489 Score = 204 bits (103), Expect = 2e-49 Identities = 224/264 (84%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||||| || Sbjct: 979 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 920 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 919 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 860 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| |||||||| || |||||||||||| | ||| || |||||||||||||||||| Sbjct: 859 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 800 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| ||||||||||||||||||||||| || ||||| |||| |||||| Sbjct: 799 ccggtcagggtcttcacgaagatctgcataccacccctcagacggaggaccaggtgcag- 741 Query: 428 nttggactccttctggatgttgta 451 | ||||| |||||||||||||| Sbjct: 740 ggtcgactctttctggatgttgta 717 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || |||||||||||| Sbjct: 529 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcaaaaagagtgcggcca 470 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||||||||| Sbjct: 469 tcttccagctgcttgccggcaaagatgagcctctgctggtcggggggaatgccctcctta 410 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| || |||||||||||| Sbjct: 409 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatg 350 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| ||||| ||||||||||||||||| || ||||| |||| | Sbjct: 349 gtcttgccggtcagggtcttcacgaaaatctgcataccacccctcagacggaggaccagg 290 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | ||||| |||||||||||||| Sbjct: 289 tgcag-ggtcgactctttctggatgttgta 261 Score = 174 bits (88), Expect = 2e-40 Identities = 183/215 (85%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 301 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggcca 242 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 241 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 182 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 181 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 122 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||| || ||||| || |||||||||||||| Sbjct: 121 gtcttgccggtcagggttttcacgaagatctgcat 87
>gb|AY099138.1| Cercomonas edax isolate pub10 polyubiquitin gene, partial cds Length = 532 Score = 216 bits (109), Expect = 5e-53 Identities = 177/200 (88%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 |||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||||||| Sbjct: 414 agggtcgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 355 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 || || ||||||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 354 ccggcgaagatgaggcgctgctgatccggggggatgccctccttgtcctggatcttctgc 295 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 ||||| || |||||||||||||| ||| || ||||||||||| |||||||| |||||| Sbjct: 294 ttcacgttctcgatggtgtcagagctctccacgtccagggtgatagtcttgccggtgagg 235 Query: 377 gtcttaacgaagatctgcat 396 ||||| |||||||||||||| Sbjct: 234 gtcttgacgaagatctgcat 215 Score = 184 bits (93), Expect = 2e-43 Identities = 158/180 (87%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 |||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||||||| Sbjct: 180 agggtcgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 121 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 || || ||||||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 120 ccggcgaagatgaggcgctgctgatccggggggatgccctccttgtcctggatcttctgc 61 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 ||||| || ||||| |||||||| ||| || |||||||||||||||||||| |||||| Sbjct: 60 ttcacgttctcgatcgtgtcagagctctccacgtccagggtgatggtcttgccggtgagg 1 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 316 cttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgag 375 |||||| || ||||| |||||||| ||| || |||||||||||||||||||| ||||| Sbjct: 529 cttcacgttctcgatcgtgtcagagctctccacgtccagggtgatggtcttgccggtgag 470 Query: 376 ggtcttaacgaagatctgcat 396 |||||| |||||||||||||| Sbjct: 469 ggtcttgacgaagatctgcat 449 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 gactccttctggatgttgtagtc 454 ||||||||||||||||||||||| Sbjct: 408 gactccttctggatgttgtagtc 386 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 gactccttctggatgttgtagtc 454 ||||||||||||||||||||||| Sbjct: 174 gactccttctggatgttgtagtc 152
>gb|AY099133.1| Cercomonas edax isolate pub5 polyubiquitin gene, partial cds Length = 532 Score = 216 bits (109), Expect = 5e-53 Identities = 177/200 (88%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| |||||||||||||| |||||||| ||||| |||||||| ||||| |||||||| Sbjct: 414 agggttgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 355 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 || || ||||||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 354 ccggcgaagatgaggcgctgctgatccggggggatgccctccttgtcctggatcttctgc 295 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 ||||| || |||||||||||||| ||| || |||||||||||||||||||| |||||| Sbjct: 294 ttcacgttctcgatggtgtcagagctctccacgtccagggtgatggtcttgccggtgagg 235 Query: 377 gtcttaacgaagatctgcat 396 ||||| |||||||||||||| Sbjct: 234 gtcttgacgaagatctgcat 215 Score = 216 bits (109), Expect = 5e-53 Identities = 183/208 (87%) Strand = Plus / Minus Query: 169 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgc 228 ||||||||||||||| ||||| | ||| |||||||||||||||||||| |||||||| || Sbjct: 208 gccaccacggaggcgcagcacaaggtgaagggtcgactccttctggatgttgtagtcagc 149 Query: 229 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 288 ||| |||||||| ||||| |||||||| || || ||||||||||||||||| ||||| || Sbjct: 148 cagggtgcggccgtcctcgagctgcttgccggcgaagatgaggcgctgctgatccggggg 89 Query: 289 gatgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaac 348 |||||||||||||||||||||||| |||||| || |||||||||||||| ||| || Sbjct: 88 gatgccctccttgtcctggatcttctgcttcacgttctcgatggtgtcagagctctccac 29 Query: 349 ctccagggtgatggtcttgccagtgagg 376 |||||||||||||||||||| |||||| Sbjct: 28 gtccagggtgatggtcttgccggtgagg 1 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 316 cttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgag 375 |||||| || ||||| |||||||| ||| || |||||||||||||||||||| ||||| Sbjct: 529 cttcacgttctcgatcgtgtcagagctctccacgtccagggtgatggtcttgccggtgag 470 Query: 376 ggtcttaacgaagatctgcat 396 |||||| |||||||||||||| Sbjct: 469 ggtcttgacgaagatctgcat 449 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 gactccttctggatgttgtagtc 454 ||||||||||||||||||||||| Sbjct: 408 gactccttctggatgttgtagtc 386 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 gactccttctggatgttgtagtc 454 ||||||||||||||||||||||| Sbjct: 174 gactccttctggatgttgtagtc 152
>ref|NR_002875.1| Mus musculus gene model 1821, (NCBI) (Gm1821) on chromosome 14 Length = 704 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 543 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 484 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 483 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 424 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||| Sbjct: 423 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccagggtgatg 364 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| |||||||| || ||||| |||| | Sbjct: 363 gtcttgccggtcagggtcttcacgaagatctgcatgccacccctcagacggaggaccagg 304 Query: 422 tgcaganttggactccttctggatgttgta 451 | ||| || ||||| |||||||||||||| Sbjct: 303 tccagggtt-gactctttctggatgttgta 275 Score = 145 bits (73), Expect = 1e-31 Identities = 168/200 (84%) Strand = Plus / Minus Query: 197 agggtcgactccttctggatnttgtagtccgccagagtgcggccatcctcaagctgctta 256 ||||| ||||| |||||||| ||||| || | || ||||||||||| || |||||||| Sbjct: 300 agggttgactctttctggatgttgtaatcagagagggtgcggccatcttccagctgcttg 241 Query: 257 ccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctggatctttgcc 316 || |||||||| | | ||||||||| || ||||||||||| || ||||||||||| ||| Sbjct: 240 ccggcaaagatcaccctctgctggtcaggggggatgccctctttatcctggatcttggcc 181 Query: 317 ttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttgccagtgagg 376 ||||| || |||||||||||| | ||| ||||| ||||||||||||||||| || ||| Sbjct: 180 ttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttgccggtcagg 121 Query: 377 gtcttaacgaagatctgcat 396 ||||| |||||||||||||| Sbjct: 120 gtcttcacgaagatctgcat 101
>gb|U29160.1|ZMU29160 Zea mays clone MubG10 ubiquitin fusion protein gene, complete cds Length = 1437 Score = 216 bits (109), Expect = 5e-53 Identities = 186/212 (87%) Strand = Plus / Minus Query: 185 agcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcc 244 ||||||| ||||||||| |||||||||||||| |||||||| || || ||||| || ||| Sbjct: 938 agcaccaggtggagggtggactccttctggatgttgtagtcggcgagggtgcgaccgtcc 879 Query: 245 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcc 304 || |||||||| || || |||||||| |||||||||||||| |||||||||||||||||| Sbjct: 878 tcgagctgcttgccggcgaagatgagccgctgctggtccggggggatgccctccttgtcc 819 Query: 305 tggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtc 364 |||||||| ||||||||||||||||||||||| || ||||| ||||||| ||||||||| Sbjct: 818 tggatcttggccttcacattgtcgatggtgtccgaggactccacctccaaagtgatggtc 759 Query: 365 ttgccagtgagggtcttaacgaagatctgcat 396 || || || || ||||| || ||||||||||| Sbjct: 758 ttccccgtcagagtcttcacaaagatctgcat 727 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 430 tggactccttctggatgttgtagtc 454 ||||||||||||||||||||||||| Sbjct: 922 tggactccttctggatgttgtagtc 898
>emb|X51703.1|MMUBIQU Mouse mRNA for ubiquitin Length = 1172 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 1003 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 944 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 943 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 884 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||||| Sbjct: 883 tcctggatcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatg 824 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 823 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 764 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 763 tgcagggtt-gactccttctggatgttgta 735 Score = 206 bits (104), Expect = 5e-50 Identities = 231/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 778 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 719 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || ||||| || || |||||||| || | ||||||||| || ||||||||||| Sbjct: 718 ccatcttccagctgtttgccggcaaagatcagcctctgctggtcaggggggatgccctct 659 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 658 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 599 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 598 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 539 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 538 aggtgcagggtt-gactctttctggatgttgta 507 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 547 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggcca 488 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 487 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 428 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 427 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 368 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 367 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 308 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 307 tgcagggtt-gactccttctggatgttgta 279 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 322 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 263 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 262 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 203 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 202 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 143 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 142 atggtcttgccggtcagggtcttcacgaagatctgcat 105
>emb|Z18245.1|BTPOLYUB Bos taurus gene for polyubiquitin Length = 1144 Score = 216 bits (109), Expect = 5e-53 Identities = 230/270 (85%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 757 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggcca 698 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 697 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 638 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 637 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 578 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| ||||||||||||||||||||||| || ||||| |||| | Sbjct: 577 gtcttgccggtcagggtcttcacgaagatctgcataccacccctcagacggaggaccagg 518 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | ||||| |||||||||||||| Sbjct: 517 tgcag-ggtcgactctttctggatgttgta 489 Score = 204 bits (103), Expect = 2e-49 Identities = 224/264 (84%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 188 accaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggccatcctca 247 |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||||| || Sbjct: 979 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 920 Query: 248 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttgtcctgg 307 |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| |||||| Sbjct: 919 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 860 Query: 308 atctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatggtcttg 367 ||||| |||||||| || |||||||||||| | ||| || |||||||||||||||||| Sbjct: 859 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 800 Query: 368 ccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccangtgcaga 427 || || |||||||| ||||||||||||||||||||||| || ||||| |||| |||||| Sbjct: 799 ccggtcagggtcttcacgaagatctgcataccacccctcagacggaggaccaggtgcag- 741 Query: 428 nttggactccttctggatgttgta 451 | ||||| |||||||||||||| Sbjct: 740 ggtcgactctttctggatgttgta 717 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || |||||||||||| Sbjct: 529 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcaaaaagagtgcggcca 470 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||||||||| Sbjct: 469 tcttccagctgcttgccggcaaagatgagcctctgctggtcggggggaatgccctcctta 410 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| || |||||||||||| Sbjct: 409 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatg 350 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| ||||| ||||||||||||||||| || ||||| |||| | Sbjct: 349 gtcttgccggtcagggtcttcacgaaaatctgcataccacccctcagacggaggaccagg 290 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| | ||||| |||||||||||||| Sbjct: 289 tgcag-ggtcgactctttctggatgttgta 261 Score = 174 bits (88), Expect = 2e-40 Identities = 183/215 (85%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 301 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggcca 242 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || ||||||||||| | ||||||||| || || ||||| ||||| Sbjct: 241 tcttccagctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttcctta 182 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 181 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 122 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcat 396 |||||||| || ||||| || |||||||||||||| Sbjct: 121 gtcttgccggtcagggttttcacgaagatctgcat 87
>gb|BC066197.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:76690 IMAGE:6435236), complete cds Length = 1214 Score = 214 bits (108), Expect = 2e-52 Identities = 232/273 (84%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 802 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 743 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 742 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 683 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| |||||||||||| Sbjct: 682 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtg 623 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcacc 418 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct: 622 atggtcttgccagtcagggtcttcacgaagatctgcatgccacccctcagacggaggacc 563 Query: 419 angtgcaganttggactccttctggatgttgta 451 | |||||| || ||||| |||||||||||||| Sbjct: 562 aggtgcagggtt-gactctttctggatgttgta 531 Score = 208 bits (105), Expect = 1e-50 Identities = 229/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||||||||| |||||||| ||||| || | |||||||||||| Sbjct: 1027 cggaggaccaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggcca 968 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 967 tcttctagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 908 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| ||||||||||| ||||||||| || | ||| ||||||| ||||||| Sbjct: 907 tcctggatcttggccttcacattctcgatggtgacactgggctccacctccaaggtgatg 848 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 847 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 788 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 787 tgcagggtt-gactccttctggatgttgta 759 Score = 200 bits (101), Expect = 3e-48 Identities = 228/270 (84%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 182 cggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcggcca 241 ||||| |||| ||| ||||| ||||| |||||||| ||||| || | || ||||||||| Sbjct: 571 cggaggaccaggtgcagggttgactctttctggatgttgtaatcagggagggtgcggcca 512 Query: 242 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctccttg 301 || || |||||||| || |||||||| || | ||||||||| || ||||||||||| || Sbjct: 511 tcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctcttta 452 Query: 302 tcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtgatg 361 ||||||||||| |||||||| || |||||||||||| | ||| ||||||||||||||| Sbjct: 451 tcctggatcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatg 392 Query: 362 gtcttgccagtgagggtcttaacgaagatctgcataccacccctgaggcggagcaccang 421 |||||||| || |||||||| |||||||||||||| ||||| || ||||| || |||| | Sbjct: 391 gtcttgccggtcagggtcttcacgaagatctgcatgccacctctcaggcgaaggaccagg 332 Query: 422 tgcaganttggactccttctggatgttgta 451 ||||| || |||||||||||||||||||| Sbjct: 331 tgcagggtt-gactccttctggatgttgta 303 Score = 165 bits (83), Expect = 2e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 179 aggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgccagagtgcgg 238 ||||| || |||| ||| ||||| |||||||||||||| ||||| || | || |||||| Sbjct: 346 aggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcagagagggtgcgg 287 Query: 239 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatgccctcc 298 ||||| || |||||||| || |||||||| || | ||||||||| || ||||||||||| Sbjct: 286 ccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctct 227 Query: 299 ttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacctccagggtg 358 || ||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||| Sbjct: 226 ttatcctggatcttggccttcacgttctcgatggtgtcactgggctccacctctagggtg 167 Query: 359 atggtcttgccagtgagggtcttaacgaagatctgcat 396 ||||||||||| || |||||||| |||||||||||||| Sbjct: 166 atggtcttgccggtcagggtcttcacgaagatctgcat 129
>ref|XM_323905.1| Neurospora crassa OR74A hypothetical protein ( ubiquitin - chicken ) (NCU04553.1) partial mRNA Length = 285 Score = 214 bits (108), Expect = 2e-52 Identities = 197/227 (86%) Strand = Plus / Minus Query: 170 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatnttgtagtccgcc 229 |||||||||||||| ||||| | ||||||||| |||||||||||| |||||||| | Sbjct: 227 ccaccacggaggcgaagcacgaggtggagggtgctctccttctggatgttgtagtcggag 168 Query: 230 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 289 || |||||||||||||| |||||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 167 agggtgcggccatcctcgagctgcttgccagcgaagatcaggcgctgctggtcagggggg 108 Query: 290 atgccctccttgtcctggatctttgccttcacattgtcgatggtgtcagatgactcaacc 349 ||||||||||||||||||||||| ||| ||||||||||||||||| ||||| ||| Sbjct: 107 atgccctccttgtcctggatcttctgcttgacattgtcgatggtgtcgctagactccacc 48 Query: 350 tccagggtgatggtcttgccagtgagggtcttaacgaagatctgcat 396 || |||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 47 tcaagggtgatagtcttgcccgtgagggtcttcacgaagatctgcat 1 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 ctccttctggatgttgtagtc 454 ||||||||||||||||||||| Sbjct: 192 ctccttctggatgttgtagtc 172 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,189,143 Number of Sequences: 3902068 Number of extensions: 3189143 Number of successful extensions: 65378 Number of sequences better than 10.0: 2467 Number of HSP's better than 10.0 without gapping: 2450 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 52573 Number of HSP's gapped (non-prelim): 9161 length of query: 454 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 432 effective length of database: 17,147,199,772 effective search space: 7407590301504 effective search space used: 7407590301504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
