| Clone Name | rbags24g18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC169675.2| Mus musculus BAC clone RP24-200J3 from chromosome 17, complete sequence Length = 171242 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ccatctccaagctgcctgcacc 74 |||||||||||||||||||||| Sbjct: 151620 ccatctccaagctgcctgcacc 151599
>gb|AC171111.2| Mus musculus BAC clone RP24-131J20 from chromosome 17, complete sequence Length = 167872 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ccatctccaagctgcctgcacc 74 |||||||||||||||||||||| Sbjct: 93907 ccatctccaagctgcctgcacc 93886
>ref|XM_966645.1| PREDICTED: Tribolium castaneum similar to CG13758-PA (LOC660414), mRNA Length = 1284 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 caccagttactttctcaacac 91 ||||||||||||||||||||| Sbjct: 732 caccagttactttctcaacac 752
>gb|AC153009.4| Mus musculus BAC clone RP23-408I18 from chromosome 9, complete sequence Length = 194871 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 taggtcacaaaaagttgatt 31 |||||||||||||||||||| Sbjct: 111821 taggtcacaaaaagttgatt 111840
>emb|AL355589.8| Human DNA sequence from clone RP11-168F17 on chromosome 9 Contains a CpG island, complete sequence Length = 143499 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 agctgcctgcaccagttactttct 85 ||||| |||||||||||||||||| Sbjct: 98400 agctgtctgcaccagttactttct 98377
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 catctccaagctgcctgcac 73 |||||||||||||||||||| Sbjct: 22294741 catctccaagctgcctgcac 22294722
>gb|AC158498.3| Medicago truncatula chromosome 2 BAC clone mth2-65n13, complete sequence Length = 124573 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gttcttatttaggtcacaaa 22 |||||||||||||||||||| Sbjct: 17595 gttcttatttaggtcacaaa 17614
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 catctccaagctgcctgcac 73 |||||||||||||||||||| Sbjct: 53385 catctccaagctgcctgcac 53366
>gb|AC006952.6|AC006952 Homo sapiens chromosome 9, clone hRPK.374_B_16, complete sequence Length = 219345 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 agctgcctgcaccagttactttct 85 ||||| |||||||||||||||||| Sbjct: 8163 agctgtctgcaccagttactttct 8140
>gb|AC122426.5| Mus musculus BAC clone RP24-174I4 from 9, complete sequence Length = 153629 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 taggtcacaaaaagttgatt 31 |||||||||||||||||||| Sbjct: 11748 taggtcacaaaaagttgatt 11767 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,744,597 Number of Sequences: 3902068 Number of extensions: 1744597 Number of successful extensions: 31972 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31954 Number of HSP's gapped (non-prelim): 18 length of query: 235 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 213 effective length of database: 17,147,199,772 effective search space: 3652353551436 effective search space used: 3652353551436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)