ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IF5_RAT (Q07205) Eukaryotic translation initiation factor 5 (eIF-5) 51 1e-06
2IF5_MOUSE (P59325) Eukaryotic translation initiation factor 5 (e... 51 1e-06
3IF5_HUMAN (P55010) Eukaryotic translation initiation factor 5 (e... 51 1e-06
4IF5_CAEEL (Q22918) Eukaryotic translation initiation factor 5 (e... 50 4e-06
5IF5_PHAVU (P48724) Eukaryotic translation initiation factor 5 (e... 49 6e-06
6IF5Z_ARATH (Q9S825) Probable eukaryotic translation initiation f... 48 1e-05
7EI2BE_RABIT (P47823) Translation initiation factor eIF-2B epsilo... 46 4e-05
8EI2BE_RAT (Q64350) Translation initiation factor eIF-2B epsilon ... 46 4e-05
9IF5Y_ARATH (Q9C8F1) Probable eukaryotic translation initiation f... 45 7e-05
10EI2BE_HUMAN (Q13144) Translation initiation factor eIF-2B epsilo... 45 9e-05
11IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 ... 45 9e-05
12IF5_MAIZE (P55876) Eukaryotic translation initiation factor 5 (e... 45 9e-05
13IF4G1_MOUSE (Q6NZJ6) Eukaryotic translation initiation factor 4 ... 44 2e-04
14EI2BE_CANAL (P87163) Translation initiation factor eIF-2B epsilo... 41 0.002
15IF4G3_HUMAN (O43432) Eukaryotic translation initiation factor 4 ... 40 0.002
16IF4G1_RABIT (P41110) Eukaryotic translation initiation factor 4 ... 40 0.003
17IF4G3_MOUSE (Q80XI3) Eukaryotic translation initiation factor 4 ... 40 0.003
18IF5_SCHPO (Q09689) Probable eukaryotic translation initiation fa... 40 0.003
19EI2BE_YEAST (P32501) Translation initiation factor eIF-2B epsilo... 37 0.019
20IF5_YEAST (P38431) Eukaryotic translation initiation factor 5 (e... 36 0.043
21IF5_DROME (Q9VXK6) Eukaryotic translation initiation factor 5 (e... 35 0.13
22IF4G2_MOUSE (Q62448) Eukaryotic translation initiation factor 4 ... 35 0.13
23NADE_MYCLE (Q9CBZ6) Glutamine-dependent NAD(+) synthetase (EC 6.... 29 5.3
24SIL1_DEBHA (Q6BTV5) Nucleotide exchange factor SIL1 precursor 29 5.3
25ARGC_SYNP6 (Q5N5V5) N-acetyl-gamma-glutamyl-phosphate reductase ... 29 5.3
26TALA_SV40 (P03070) Large T antigen 28 9.1
27FANCC_RAT (O35870) Fanconi anemia group C protein homolog (Prote... 28 9.1
28DVA1_DICVI (Q24702) DVA-1 polyprotein precursor (Antigen 1) (All... 28 9.1

>IF5_RAT (Q07205) Eukaryotic translation initiation factor 5 (eIF-5)|
          Length = 429

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
 Frame = -2

Query: 355 AKLMKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQKGRQSFVKAL----EPFVKWLXEAX 188
           A+L+   P I++ +YD D+L E+ I+ W  K S +   +   K +    EPF+KWL EA 
Sbjct: 325 AQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFIKWLKEAE 384

Query: 187 EE 182
           EE
Sbjct: 385 EE 386



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>IF5_MOUSE (P59325) Eukaryotic translation initiation factor 5 (eIF-5)|
          Length = 429

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
 Frame = -2

Query: 355 AKLMKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQKGRQSFVKAL----EPFVKWLXEAX 188
           A+L+   P I++ +YD D+L E+ I+ W  K S +   +   K +    EPF+KWL EA 
Sbjct: 325 AQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFIKWLKEAE 384

Query: 187 EE 182
           EE
Sbjct: 385 EE 386



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>IF5_HUMAN (P55010) Eukaryotic translation initiation factor 5 (eIF-5)|
          Length = 431

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
 Frame = -2

Query: 355 AKLMKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQKGRQSFVKAL----EPFVKWLXEAX 188
           A+L+   P I++ +YD D+L E+ I+ W  K S +   +   K +    EPF+KWL EA 
Sbjct: 327 AQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFIKWLKEAE 386

Query: 187 EE 182
           EE
Sbjct: 387 EE 388



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>IF5_CAEEL (Q22918) Eukaryotic translation initiation factor 5 (eIF-5)|
          Length = 436

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
 Frame = -2

Query: 358 DAKLMKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQKGRQSFVKAL----EPFVKWLXEA 191
           +A+L+     II+SLYD+DV  ED+++ W  K S++   +SF K +    +P + WL EA
Sbjct: 313 EAELLSKSAHIIKSLYDEDVCEEDSLISWGEKPSSKYVSKSFAKKIIENSQPVLNWLKEA 372

Query: 190 XEE 182
            EE
Sbjct: 373 EEE 375



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>IF5_PHAVU (P48724) Eukaryotic translation initiation factor 5 (eIF-5)|
          Length = 443

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = -2

Query: 367 CYEDAKLMKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQKGRQSFV-KALEPFVKWLXEA 191
           C  ++  +K    ++++LYD DVL E+ I+LW++KG     + S + K  +PF+ WL  A
Sbjct: 377 CKPNSNALKEVALVLKTLYDADVLEEEAIVLWYQKGLKGDNKNSKIWKNAQPFIDWLQNA 436

Query: 190 XEE 182
             E
Sbjct: 437 ESE 439



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>IF5Z_ARATH (Q9S825) Probable eukaryotic translation initiation factor 5-2|
           (eIF-5 2)
          Length = 437

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
 Frame = -2

Query: 400 ELELIYKVQTQCYEDA--KLMKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQKGRQSFV- 230
           ++ L+  + T C ++   + +K    ++++LYDQD++ E+ +L W+ KG     + S V 
Sbjct: 357 QMHLLNSIGTFCGKNGNEEALKEVALVLKALYDQDIIEEEVVLDWYEKGLTGADKSSPVW 416

Query: 229 KALEPFVKWLXEAXEE 182
           K ++PFV+WL  A  E
Sbjct: 417 KNVKPFVEWLQSAESE 432



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>EI2BE_RABIT (P47823) Translation initiation factor eIF-2B epsilon subunit|
           (eIF-2B GDP-GTP exchange factor)
          Length = 721

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
 Frame = -2

Query: 451 VNAWAGLMNAFCTSGKLELELIYKVQTQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILLW 272
           + AW+ +   +       LE +  ++    E   L     +++   Y  ++LAE+TIL W
Sbjct: 625 LKAWSPVFRNYIKRAADHLEALAAIEEFFLEHEALGTCIAKVLMGFYQLEILAEETILSW 684

Query: 271 F-RKGSNQKGRQ-SFVKALEPFVKWLXEAXEE 182
           F ++    KGRQ    + L+ F++WL EA EE
Sbjct: 685 FGQRDVTDKGRQLRKNQQLQRFIQWLKEAEEE 716



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>EI2BE_RAT (Q64350) Translation initiation factor eIF-2B epsilon subunit|
           (eIF-2B GDP-GTP exchange factor)
          Length = 716

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
 Frame = -2

Query: 451 VNAWAGLMNAFCTSGKLELELIYKVQTQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILLW 272
           + AW+ +   +       LE +  ++    E   L+    +++ + Y  ++LAE+TIL W
Sbjct: 620 LKAWSPVFRNYIKRAADHLEALAAIEDFFLEHETLVPSLAKVLMAFYQLEILAEETILSW 679

Query: 271 F-RKGSNQKGRQ-SFVKALEPFVKWLXEAXEE 182
           F ++    KG+Q    + L+ F++WL EA EE
Sbjct: 680 FSQRDITDKGQQLRKNQQLQRFIQWLREAEEE 711



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>IF5Y_ARATH (Q9C8F1) Probable eukaryotic translation initiation factor 5-1|
           (eIF-5 1)
          Length = 439

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = -2

Query: 400 ELELIYKVQTQCYE-DAKLMKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQKGRQSFVKA 224
           ++ L+  +++ C +  A+  K    +I+ LYD+D+L ED I+ W+ KG         +K 
Sbjct: 365 QMGLLNGIESFCMKASAEAAKEVALVIKGLYDEDILDEDVIVEWYNKGVKS---SPVLKN 421

Query: 223 LEPFVKWLXEAXEE 182
           + PF++WL  A  E
Sbjct: 422 VTPFIEWLQNAESE 435



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>EI2BE_HUMAN (Q13144) Translation initiation factor eIF-2B epsilon subunit|
           (eIF-2B GDP-GTP exchange factor)
          Length = 721

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
 Frame = -2

Query: 451 VNAWAGLMNAFCTSGKLELELIYKVQTQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILLW 272
           + AW+ +   +       LE +  ++    E   L     +++ + Y  ++LAE+TIL W
Sbjct: 625 LKAWSPVFRNYIKRAADHLEALAAIEDFFLEHEALGISMAKVLMAFYQLEILAEETILSW 684

Query: 271 F-RKGSNQKGRQ-SFVKALEPFVKWLXEAXEE 182
           F ++ +  KG+Q    + L+ F++WL EA EE
Sbjct: 685 FSQRDTTDKGQQLRKNQQLQRFIQWLKEAEEE 716



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>IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 gamma 1|
            (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220)
          Length = 1600

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
 Frame = -2

Query: 451  VNAWAGLMNAFCTSGKLELELIYKVQTQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILLW 272
            + A A L+  +    + EL+ +Y +Q       +   L      +LYD+DV+ ED    W
Sbjct: 1505 LKARAKLLQKYLCDEQKELQALYALQALVVTLEQPPNLLRMFFDALYDEDVVKEDAFYSW 1564

Query: 271  --FRKGSNQKGRQSFVKALEPFVKWLXEAXEE 182
               +  + Q+G+   +K++  F KWL EA EE
Sbjct: 1565 ESSKDPAEQQGKGVALKSVTAFFKWLREAEEE 1596



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>IF5_MAIZE (P55876) Eukaryotic translation initiation factor 5 (eIF-5)|
          Length = 451

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 20/56 (35%), Positives = 32/56 (57%)
 Frame = -2

Query: 346 MKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQKGRQSFVKALEPFVKWLXEAXEEE 179
           +K  P ++++LYD D+L E+TI+ W+            VK  +PFV+WL  A  +E
Sbjct: 391 LKEVPVVLKALYDGDILDEETIVDWYNDAVAAGKDSQVVKNAKPFVEWLQSAESDE 446



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>IF4G1_MOUSE (Q6NZJ6) Eukaryotic translation initiation factor 4 gamma 1|
            (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1)
          Length = 1600

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
 Frame = -2

Query: 439  AGLMNAFCTSGKLELELIYKVQTQCY---EDAKLMKLFPEIIRSLYDQDVLAEDTILLW- 272
            A L+  +    + EL+ +Y +Q       + A L+++F +   +LYD+DV+ ED    W 
Sbjct: 1508 ARLLQKYLCDEQKELQALYALQALVVTLEQPANLLRMFFD---ALYDEDVVKEDAFYSWE 1564

Query: 271  -FRKGSNQKGRQSFVKALEPFVKWLXEAXEEE 179
              +  + Q+G+   +K++  F  WL EA +EE
Sbjct: 1565 SSKDPAEQQGKGVALKSVTAFFNWLREAEDEE 1596



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>EI2BE_CANAL (P87163) Translation initiation factor eIF-2B epsilon subunit|
           (eIF-2B GDP-GTP exchange factor) (Guanine nucleotide
           exchange factor subunit GCD6) (GCD complex subunit GCD6)
           (Fragment)
          Length = 189

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = -2

Query: 325 IRSLYDQDVLAEDTILLWFRKGSNQKGRQSFVKALEPFVKWLXEAXEEE 179
           ++S YD +V+ E+ IL W+  G N + R    K    F+ WL EA EE+
Sbjct: 136 VKSFYDMEVVEEENILKWWNDGENDEVRTLAAK----FITWLQEADEED 180



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>IF4G3_HUMAN (O43432) Eukaryotic translation initiation factor 4 gamma 3|
            (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II)
            (eIF4GII)
          Length = 1585

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
 Frame = -2

Query: 400  ELELIYKVQTQCY---EDAKLMKLFPEIIRSLYDQDVLAEDTILLW--FRKGSNQKGRQS 236
            EL+ +Y +Q       + A L+++F +    LYD++V++ED    W   +  + Q G+  
Sbjct: 1507 ELQALYALQASIVKLDQPANLLRMFFDC---LYDEEVISEDAFYKWESSKDPAEQNGKGV 1563

Query: 235  FVKALEPFVKWLXEAXEE 182
             +K++  F  WL EA EE
Sbjct: 1564 ALKSVTAFFTWLREAEEE 1581



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>IF4G1_RABIT (P41110) Eukaryotic translation initiation factor 4 gamma 1|
            (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220)
          Length = 1402

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = -2

Query: 361  EDAKLMKLFPEIIRSLYDQDVLAEDTILLW--FRKGSNQKGRQSFVKALEPFVKWLXEAX 188
            + A L+++F +   +LYD+DV+ E+    W   +  + Q+G+   +K++  F KWL E  
Sbjct: 1339 QPANLLRMFFD---ALYDEDVVKEEAFYSWESSKDPAEQQGKGVALKSVTAFFKWLREVE 1395

Query: 187  EEE 179
            EEE
Sbjct: 1396 EEE 1398



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>IF4G3_MOUSE (Q80XI3) Eukaryotic translation initiation factor 4 gamma 3|
            (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II)
            (eIF4GII)
          Length = 1579

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
 Frame = -2

Query: 400  ELELIYKVQTQCY---EDAKLMKLFPEIIRSLYDQDVLAEDTILLW--FRKGSNQKGRQS 236
            EL+ +Y +Q       + A L+++F +    LYD++V++ED    W   +  + Q G+  
Sbjct: 1501 ELQALYALQASIVKLDQPANLLRMFFDC---LYDEEVISEDAFYKWESSKDPAEQAGKGV 1557

Query: 235  FVKALEPFVKWLXEAXEE 182
             +K++  F  WL EA EE
Sbjct: 1558 ALKSVTAFFTWLREAEEE 1575



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>IF5_SCHPO (Q09689) Probable eukaryotic translation initiation factor 5|
           (eIF-5)
          Length = 395

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
 Frame = -2

Query: 433 LMNAFCTSGKLELELIYKVQTQCYEDAKLMKL--FPEIIRSLYDQDVLAEDTILLWFRKG 260
           L    CT+ K E  L+   + +  E+ +L+ +   P+++  +Y  D++++D    W  K 
Sbjct: 292 LFKKLCTTDKHERALLGGFE-RLMENTELVHIDVVPKVLLEIYQNDLVSDDMFEKWGAKA 350

Query: 259 S----NQKGRQSFVKALEPFVKWLXEAXEE 182
           S    +++  +   +A EPF+ WL EA +E
Sbjct: 351 SKKYVSRETSKKIHEAAEPFLTWLAEASDE 380



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>EI2BE_YEAST (P32501) Translation initiation factor eIF-2B epsilon subunit|
           (eIF-2B GDP-GTP exchange factor) (Guanine nucleotide
           exchange factor subunit GCD6) (GCD complex subunit GCD6)
          Length = 712

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = -2

Query: 391 LIYKVQTQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQKGRQSFVKALEPF 212
           ++ K+  Q ++   L+ LF  ++ SLYD D++ ED I  W+   S         K    +
Sbjct: 639 IMEKIVEQSFDKPDLI-LFSALV-SLYDNDIIEEDVIYKWWDNVSTDPRYDEVKKLTVKW 696

Query: 211 VKWLXEAXEE 182
           V+WL  A EE
Sbjct: 697 VEWLQNADEE 706



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>IF5_YEAST (P38431) Eukaryotic translation initiation factor 5 (eIF-5)|
          Length = 405

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
 Frame = -2

Query: 361 EDAKLMKLFPEIIRSLYDQDVLAEDTILLWFRKGSN----QKGRQSFVKALEPFVKWLXE 194
           E   L+ L P+I+  LY+ D+++E+ I+ +  K S     ++  +   +A +PF+ WL  
Sbjct: 335 EHKDLIPLLPKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKPFITWLET 394

Query: 193 AXEEE 179
           A  ++
Sbjct: 395 AESDD 399



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>IF5_DROME (Q9VXK6) Eukaryotic translation initiation factor 5 (eIF-5)|
          Length = 464

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = -2

Query: 349 LMKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQKGRQSFVKALE----PFVKWLXEAXEE 182
           LM     I +  YD D+L E  IL W +K S +   ++    +     PFV WL  A EE
Sbjct: 352 LMSKVAGIFKLFYDLDILDEAVILEWAQKVSKRHVSKNIAAEIHEKAMPFVLWLKNAEEE 411



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>IF4G2_MOUSE (Q62448) Eukaryotic translation initiation factor 4 gamma 2|
            (eIF-4-gamma 2) (eIF-4G 2) (eIF4G 2) (p97) (Novel
            APOBEC-1 target 1) (Translation repressor NAT1)
          Length = 906

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -2

Query: 403  LELELIYKVQTQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQ-KGRQSFVK 227
            L++  +Y +Q  CY  +    +        YD +++ E+  L W    + +  G+   + 
Sbjct: 825  LQVSALYALQVHCYNSSFPKGMLLRFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALF 884

Query: 226  ALEPFVKWLXEAXEEE 179
             +  ++ WL  A EEE
Sbjct: 885  QVNQWLTWLETAEEEE 900



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>NADE_MYCLE (Q9CBZ6) Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+)|
           synthase [glutamine-hydrolyzing])
          Length = 680

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 388 IYKVQTQCYEDAKLMKLFPEIIRSLYD-QDVLAEDTIL 278
           + ++  QC++D   + +FPE+  S Y  +D+L +D +L
Sbjct: 33  VLRLARQCHDDGVAVAVFPELTLSGYSIEDILLQDLLL 70



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>SIL1_DEBHA (Q6BTV5) Nucleotide exchange factor SIL1 precursor|
          Length = 427

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -2

Query: 316 LYDQDVLAEDTILLWFRKGSNQKGRQSFVKALEPFVKWLXEAXEEE*RG 170
           L D  V +ED   L+F K S    +   +K  + F++WL +  E   +G
Sbjct: 338 LADSGVASEDQFKLYFNKLSEVHSQDKSLKPSKAFMEWLSKEAELRSKG 386



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>ARGC_SYNP6 (Q5N5V5) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 352

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -2

Query: 367 CYEDAKLMKLFPEIIRSLYDQDVLAEDTILLWFRKGSNQKGRQSFVKAL 221
           CY  A L+ L P + + L D D     TI++  + G++  GRQ+   AL
Sbjct: 155 CYPTASLLALAPALKQGLIDPD-----TIVIDAKSGTSGAGRQAKTNAL 198



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>TALA_SV40 (P03070) Large T antigen|
          Length = 708

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 362 ITLCLDLVYEFQF*LSTCAKCIHKTSPS 445
           + L L +  EFQ+    C KCI K  PS
Sbjct: 285 VLLLLGMYLEFQYSFEMCLKCIKKEQPS 312



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>FANCC_RAT (O35870) Fanconi anemia group C protein homolog (Protein FACC)|
          Length = 557

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 247 GRQSFVKALEPFVKWLXEAXEEE*RGTVLALK*VFPYT-PCL 125
           G  + + AL+ F   L EA  +E +    ALK  FPY+ PCL
Sbjct: 308 GAPAVLAALQIFTSCLVEALRKENKQLKFALKTYFPYSAPCL 349



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>DVA1_DICVI (Q24702) DVA-1 polyprotein precursor (Antigen 1) (Allergen 1)|
           (Nematode polyprotein allergen DVA-1) (NPA DVA-1)
           [Contains: DVA-1 unit A; DVA-1 unit B; DVA-1 unit C;
           DVA-1 unit D; DVA-1 unit E; DVA-1 unit F; DVA-1 unit G;
           DVA-1 unit H; DVA-1 un
          Length = 1557

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 27/101 (26%)
 Frame = -2

Query: 400 ELELIYKVQTQCYEDAK----------------------LMKLFPEIIRSLYDQ-----D 302
           ++EL  K ++QCY+  K                      LMK   E+   L +      +
Sbjct: 469 KIELKAKFKSQCYDWVKEVATSEEMNDIMKMHESKNHSDLMKRLTELENRLTEDQKHTIE 528

Query: 301 VLAEDTILLWFRKGSNQKGRQSFVKALEPFVKWLXEAXEEE 179
            + E  + LW  + +N++ +QS  +A++ ++ W+ +  +E+
Sbjct: 529 HVREVCLGLWEVQNTNKQHKQSLEEAMDAYLSWMTDEDKEK 569


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,632,522
Number of Sequences: 219361
Number of extensions: 1249253
Number of successful extensions: 2760
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2751
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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