ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
2dbj|AK059141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
3gb|AY103565.1| Zea mays PCO067369 mRNA sequence 274 2e-70
4gb|AY596583.1| Saccharum officinarum clone SCBGLR1003E06, comple... 266 6e-68
5gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome... 204 2e-49
6gb|AC148658.2| Oryza sativa (japonica cultivar-group) chromosome... 204 2e-49
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 204 2e-49
9gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete se... 113 5e-22
10gb|AC095017.1| Drosophila melanogaster, chromosome 3R, region 89... 48 0.026
11gb|AE003714.2| Drosophila melanogaster chromosome 3R, section 52... 48 0.026
12gb|L48177.1|L48177 Drosophila melanogaster DNA sequence (P1 DS03... 48 0.026
13gb|U31961.1|DMU31961 Drosophila melanogaster bithorax complex (B... 48 0.026
14gb|AC005997.3| Homo sapiens PAC clone RP4-558L10 from 7, complet... 42 1.6
15gb|AC142349.1| Pan troglodytes BAC clone RP43-9F6 from 7, comple... 42 1.6
16gb|AC112219.2| Homo sapiens chromosome 3 clone RP11-433A10, comp... 42 1.6
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19dbj|AP005834.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
20ref|NM_180171.2| Arabidopsis thaliana phosphogluconate dehydroge... 40 6.3
21ref|NM_111103.4| Arabidopsis thaliana phosphogluconate dehydroge... 40 6.3
22gb|AC102166.13| Mus musculus chromosome 1, clone RP23-447B15, co... 40 6.3
23ref|XM_461779.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 6.3
24gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21... 40 6.3
25gb|AC123034.5| Mus musculus BAC clone RP24-484E17 from chromosom... 40 6.3
26emb|AL513023.12| Human DNA sequence from clone RP11-256A6 on chr... 40 6.3
27gb|AC090099.14| Homo sapiens chromosome 11, clone RP11-113D6, co... 40 6.3
28emb|AL022165.1|HS71L16 Human DNA sequence from clone RP1-71L16 o... 40 6.3
29emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 40 6.3
30gb|AC108007.5| Homo sapiens chromosome 11, clone CTD-3038L12, co... 40 6.3
31gb|AC152395.9| Mus musculus chromosome 15, clone RP23-391D2, com... 40 6.3
32gb|AC023711.5| Drosophila melanogaster X BAC RP98-6C4 (Roswell P... 40 6.3
33gb|AC104511.5| Drosophila melanogaster X BAC RP98-39D14 (Roswell... 40 6.3
34gb|AC023685.4| Drosophila melanogaster 3L BAC RP98-20N12 (Roswel... 40 6.3
35gb|AC022889.8| Homo sapiens chromosome 15, clone RP11-492D5, com... 40 6.3
36gb|AC104420.2| Homo sapiens chromosome 15, clone RP11-945A13, co... 40 6.3
37gb|AC073917.19| Homo sapiens 12q BAC RP11-415D21 (Roswell Park C... 40 6.3
38gb|AC068397.6| Homo sapiens chromosome 15, clone RP11-272D12, co... 40 6.3
39gb|AF424591.1|AF424591 Arabidopsis thaliana AT3g02360/F11A12_104... 40 6.3
40gb|AC073532.18|AC073532 Homo sapiens 12 BAC RP11-150F20 (Roswell... 40 6.3
41gb|AC068900.3|AC068900 Arabidopsis thaliana chromosome 3 BAC F11... 40 6.3
42gb|AY087341.1| Arabidopsis thaliana clone 34412 mRNA, complete s... 40 6.3
43gb|BT002299.1| Arabidopsis thaliana At3g02360/F11A12_104 mRNA, c... 40 6.3
44gb|AC004003.1|AC004003 Homo sapiens BAC clone CTA-437L15 from 8q... 40 6.3
45emb|BX255939.3| Zebrafish DNA sequence from clone DKEY-5G7 in li... 40 6.3
46gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 ... 40 6.3
47gb|AC133188.4| Mus musculus BAC clone RP23-330F6 from 13, comple... 40 6.3
48gb|AC158950.3| Mus musculus chromosome 1, clone RP24-215K13, com... 40 6.3 
>dbj|AK071277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082M08, full
            insert sequence
          Length = 1609

 Score =  291 bits (147), Expect = 1e-75
 Identities = 258/296 (87%)
 Strand = Plus / Minus

                                                                        
Query: 175  tttattcttcctcctntgcctcctnaagccatttgacgaaaggctccagagctttcacga 234
            ||||||| |||||||  |||||||  |||||||| || ||||| ||||| ||||| ||||
Sbjct: 1378 tttattcctcctcctcggcctcctccagccatttaacaaaaggttccagtgctttgacga 1319

                                                                        
Query: 235  aagattgccttcctttttggtttgaacccttgcggaaccaaagaagtatggtatcttcag 294
            |||||||||| || ||| ||||||||||||||||||||||||| || |||||||||||||
Sbjct: 1318 aagattgcctgccctttgggtttgaacccttgcggaaccaaaggaggatggtatcttcag 1259

                                                                        
Query: 295  cgaggacatcttgatcatacagagatcttataatttcagggaacagcttcatcaacttag 354
            | ||||||||||| |||||||| | ||| || |||||||| || |||||||||| |||||
Sbjct: 1258 ctaggacatcttggtcatacagcgttctgattatttcaggaaatagcttcatcagcttag 1199

                                                                        
Query: 355  cgtcctcataacactgtgtctggaccttgtatatgagttccagttctagctttccacttg 414
            | |||||||| ||||||||||| || |||||||||||||| ||||| ||| | |||||||
Sbjct: 1198 catcctcatagcactgtgtctgaactttgtatatgagttcgagttcaagcctgccacttg 1139

                                                                    
Query: 415  tgcaaaatgcattcataagaccagcccaagcattnacctgccgaagtgctgaatta 470
            |||| |||||||||| ||| |||||||| || || |||||||||||||||||||||
Sbjct: 1138 tgcagaatgcattcaaaaggccagcccatgctttcacctgccgaagtgctgaatta 1083
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>dbj|AK059141.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-A05, full
           insert sequence
          Length = 613

 Score =  291 bits (147), Expect = 1e-75
 Identities = 258/296 (87%)
 Strand = Plus / Minus

                                                                       
Query: 175 tttattcttcctcctntgcctcctnaagccatttgacgaaaggctccagagctttcacga 234
           ||||||| |||||||  |||||||  |||||||| || ||||| ||||| ||||| ||||
Sbjct: 431 tttattcctcctcctcggcctcctccagccatttaacaaaaggttccagtgctttgacga 372

                                                                       
Query: 235 aagattgccttcctttttggtttgaacccttgcggaaccaaagaagtatggtatcttcag 294
           |||||||||| || ||| ||||||||||||||||||||||||| || |||||||||||||
Sbjct: 371 aagattgcctgccctttgggtttgaacccttgcggaaccaaaggaggatggtatcttcag 312

                                                                       
Query: 295 cgaggacatcttgatcatacagagatcttataatttcagggaacagcttcatcaacttag 354
           | ||||||||||| |||||||| | ||| || |||||||| || |||||||||| |||||
Sbjct: 311 ctaggacatcttggtcatacagcgttctgattatttcaggaaatagcttcatcagcttag 252

                                                                       
Query: 355 cgtcctcataacactgtgtctggaccttgtatatgagttccagttctagctttccacttg 414
           | |||||||| ||||||||||| || |||||||||||||| ||||| ||| | |||||||
Sbjct: 251 catcctcatagcactgtgtctgaactttgtatatgagttcgagttcaagcctgccacttg 192

                                                                   
Query: 415 tgcaaaatgcattcataagaccagcccaagcattnacctgccgaagtgctgaatta 470
           |||| |||||||||| ||| |||||||| || || |||||||||||||||||||||
Sbjct: 191 tgcagaatgcattcaaaaggccagcccatgctttcacctgccgaagtgctgaatta 136
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>gb|AY103565.1| Zea mays PCO067369 mRNA sequence
          Length = 1771

 Score =  274 bits (138), Expect = 2e-70
 Identities = 255/295 (86%)
 Strand = Plus / Minus

                                                                        
Query: 176  ttattcttcctcctntgcctcctnaagccatttgacgaaaggctccagagctttcacgaa 235
            ||||||||||||||  |||||||  ||||||||||| || ||||||||||||||||||||
Sbjct: 1385 ttattcttcctcctcagcctcctcgagccatttgacaaacggctccagagctttcacgaa 1326

                                                                        
Query: 236  agattgccttcctttttggtttgaacccttgcggaaccaaagaagtatggtatcttcagc 295
            ||||||||| || || ||||||||||| || ||||||||||| || |  |||||||||||
Sbjct: 1325 agattgcctgcccttctggtttgaacctttacggaaccaaagcaggacagtatcttcagc 1266

                                                                        
Query: 296  gaggacatcttgatcatacagagatcttataatttcagggaacagcttcatcaacttagc 355
             ||||||||||| |||||||| | |||||| |||||||| ||||||||||||| ||||||
Sbjct: 1265 taggacatcttggtcatacagtgttcttatgatttcaggaaacagcttcatcagcttagc 1206

                                                                        
Query: 356  gtcctcataacactgtgtctggaccttgtatatgagttccagttctagctttccacttgt 415
             |||||||| ||||||||||| || |||||||| ||||||||||| ||  | ||||| ||
Sbjct: 1205 atcctcatagcactgtgtctgtactttgtatataagttccagttcgagtctgccactcgt 1146

                                                                   
Query: 416  gcaaaatgcattcataagaccagcccaagcattnacctgccgaagtgctgaatta 470
            |||||| ||||||| |||  ||||||| || || |||||||||||||||| ||||
Sbjct: 1145 gcaaaaagcattcaaaagctcagcccatgctttcacctgccgaagtgctgcatta 1091
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>gb|AY596583.1| Saccharum officinarum clone SCBGLR1003E06, complete sequence
          Length = 1627

 Score =  266 bits (134), Expect = 6e-68
 Identities = 254/295 (86%)
 Strand = Plus / Plus

                                                                       
Query: 176 ttattcttcctcctntgcctcctnaagccatttgacgaaaggctccagagctttcacgaa 235
           ||||||||||||||  |||||||  ||||||||||| || ||||||||||||||||||||
Sbjct: 320 ttattcttcctcctcagcctcctcgagccatttgacaaacggctccagagctttcacgaa 379

                                                                       
Query: 236 agattgccttcctttttggtttgaacccttgcggaaccaaagaagtatggtatcttcagc 295
           ||||||||| || ||  |||||||||| || ||||||||||| || |  |||||||||||
Sbjct: 380 agattgcctgcccttcgggtttgaacctttacggaaccaaaggaggacagtatcttcagc 439

                                                                       
Query: 296 gaggacatcttgatcatacagagatcttataatttcagggaacagcttcatcaacttagc 355
            ||||||||||| |||||||| | |||||| |||||||| ||||||||||||| ||||||
Sbjct: 440 taggacatcttggtcatacagtgttcttatgatttcaggaaacagcttcatcagcttagc 499

                                                                       
Query: 356 gtcctcataacactgtgtctggaccttgtatatgagttccagttctagctttccacttgt 415
            |||||||| ||||| ||||| || |||||||| ||||||||||| ||  | ||||| ||
Sbjct: 500 atcctcatagcactgcgtctgaactttgtatataagttccagttcaagtctgccactcgt 559

                                                                  
Query: 416 gcaaaatgcattcataagaccagcccaagcattnacctgccgaagtgctgaatta 470
           |||||| ||||||| |||  |||||||||| || |||||||||||||||| ||||
Sbjct: 560 gcaaaaagcattcaaaagctcagcccaagctttcacctgccgaagtgctgcatta 614
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>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01,
             complete sequence
          Length = 182504

 Score =  204 bits (103), Expect = 2e-49
 Identities = 177/202 (87%)
 Strand = Plus / Minus

                                                                         
Query: 253   ggtttgaacccttgcggaaccaaagaagtatggtatcttcagcgaggacatcttgatcat 312
             ||||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 93154 ggtttgaacccttgcggaaccaaaggaggatggtatcttcagctaggacatcttggtcat 93095

                                                                         
Query: 313   acagagatcttataatttcagggaacagcttcatcaacttagcgtcctcataacactgtg 372
             |||| | ||| || |||||||| || |||||||||| |||||| |||||||| |||||||
Sbjct: 93094 acagcgttctgattatttcaggaaatagcttcatcagcttagcatcctcatagcactgtg 93035

                                                                         
Query: 373   tctggaccttgtatatgagttccagttctagctttccacttgtgcaaaatgcattcataa 432
             |||| || |||||||||||||| ||||| ||| | ||||||||||| |||||||||| ||
Sbjct: 93034 tctgaactttgtatatgagttcgagttcaagcctgccacttgtgcagaatgcattcaaaa 92975

                                   
Query: 433   gaccagcccaagcattnacctg 454
             | |||||||| || || |||||
Sbjct: 92974 ggccagcccatgctttcacctg 92953



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                         
Query: 175   tttattcttcctcctntgcctcctnaagccatttgacgaaaggctccagagctttcacga 234
             ||||||| |||||||  |||||||  |||||||| || ||||| ||||| ||||| ||||
Sbjct: 93601 tttattcctcctcctcggcctcctccagccatttaacaaaaggttccagtgctttgacga 93542

                       
Query: 235   aagattgcct 244
             ||||||||||
Sbjct: 93541 aagattgcct 93532



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 446   attnacctgccgaagtgctgaatta 470
             ||| |||||||||||||||||||||
Sbjct: 90876 atttacctgccgaagtgctgaatta 90852
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>gb|AC148658.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018P20
              map near S6115, complete sequence
          Length = 139249

 Score =  204 bits (103), Expect = 2e-49
 Identities = 177/202 (87%)
 Strand = Plus / Plus

                                                                          
Query: 253    ggtttgaacccttgcggaaccaaagaagtatggtatcttcagcgaggacatcttgatcat 312
              ||||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 135544 ggtttgaacccttgcggaaccaaaggaggatggtatcttcagctaggacatcttggtcat 135603

                                                                          
Query: 313    acagagatcttataatttcagggaacagcttcatcaacttagcgtcctcataacactgtg 372
              |||| | ||| || |||||||| || |||||||||| |||||| |||||||| |||||||
Sbjct: 135604 acagcgttctgattatttcaggaaatagcttcatcagcttagcatcctcatagcactgtg 135663

                                                                          
Query: 373    tctggaccttgtatatgagttccagttctagctttccacttgtgcaaaatgcattcataa 432
              |||| || |||||||||||||| ||||| ||| | ||||||||||| |||||||||| ||
Sbjct: 135664 tctgaactttgtatatgagttcgagttcaagcctgccacttgtgcagaatgcattcaaaa 135723

                                    
Query: 433    gaccagcccaagcattnacctg 454
              | |||||||| || || |||||
Sbjct: 135724 ggccagcccatgctttcacctg 135745



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                          
Query: 175    tttattcttcctcctntgcctcctnaagccatttgacgaaaggctccagagctttcacga 234
              ||||||| |||||||  |||||||  |||||||| || ||||| ||||| ||||| ||||
Sbjct: 135097 tttattcctcctcctcggcctcctccagccatttaacaaaaggttccagtgctttgacga 135156

                        
Query: 235    aagattgcct 244
              ||||||||||
Sbjct: 135157 aagattgcct 135166



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 446    attnacctgccgaagtgctgaatta 470
              ||| |||||||||||||||||||||
Sbjct: 137822 atttacctgccgaagtgctgaatta 137846
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  204 bits (103), Expect = 2e-49
 Identities = 177/202 (87%)
 Strand = Plus / Plus

                                                                            
Query: 253      ggtttgaacccttgcggaaccaaagaagtatggtatcttcagcgaggacatcttgatcat 312
                ||||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 12074918 ggtttgaacccttgcggaaccaaaggaggatggtatcttcagctaggacatcttggtcat 12074977

                                                                            
Query: 313      acagagatcttataatttcagggaacagcttcatcaacttagcgtcctcataacactgtg 372
                |||| | ||| || |||||||| || |||||||||| |||||| |||||||| |||||||
Sbjct: 12074978 acagcgttctgattatttcaggaaatagcttcatcagcttagcatcctcatagcactgtg 12075037

                                                                            
Query: 373      tctggaccttgtatatgagttccagttctagctttccacttgtgcaaaatgcattcataa 432
                |||| || |||||||||||||| ||||| ||| | ||||||||||| |||||||||| ||
Sbjct: 12075038 tctgaactttgtatatgagttcgagttcaagcctgccacttgtgcagaatgcattcaaaa 12075097

                                      
Query: 433      gaccagcccaagcattnacctg 454
                | |||||||| || || |||||
Sbjct: 12075098 ggccagcccatgctttcacctg 12075119



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                            
Query: 175      tttattcttcctcctntgcctcctnaagccatttgacgaaaggctccagagctttcacga 234
                ||||||| |||||||  |||||||  |||||||| || ||||| ||||| ||||| ||||
Sbjct: 12074471 tttattcctcctcctcggcctcctccagccatttaacaaaaggttccagtgctttgacga 12074530

                          
Query: 235      aagattgcct 244
                ||||||||||
Sbjct: 12074531 aagattgcct 12074540



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 446      attnacctgccgaagtgctgaatta 470
                ||| |||||||||||||||||||||
Sbjct: 12077196 atttacctgccgaagtgctgaatta 12077220
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  204 bits (103), Expect = 2e-49
 Identities = 177/202 (87%)
 Strand = Plus / Plus

                                                                            
Query: 253      ggtttgaacccttgcggaaccaaagaagtatggtatcttcagcgaggacatcttgatcat 312
                ||||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 12154225 ggtttgaacccttgcggaaccaaaggaggatggtatcttcagctaggacatcttggtcat 12154284

                                                                            
Query: 313      acagagatcttataatttcagggaacagcttcatcaacttagcgtcctcataacactgtg 372
                |||| | ||| || |||||||| || |||||||||| |||||| |||||||| |||||||
Sbjct: 12154285 acagcgttctgattatttcaggaaatagcttcatcagcttagcatcctcatagcactgtg 12154344

                                                                            
Query: 373      tctggaccttgtatatgagttccagttctagctttccacttgtgcaaaatgcattcataa 432
                |||| || |||||||||||||| ||||| ||| | ||||||||||| |||||||||| ||
Sbjct: 12154345 tctgaactttgtatatgagttcgagttcaagcctgccacttgtgcagaatgcattcaaaa 12154404

                                      
Query: 433      gaccagcccaagcattnacctg 454
                | |||||||| || || |||||
Sbjct: 12154405 ggccagcccatgctttcacctg 12154426



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                            
Query: 175      tttattcttcctcctntgcctcctnaagccatttgacgaaaggctccagagctttcacga 234
                ||||||| |||||||  |||||||  |||||||| || ||||| ||||| ||||| ||||
Sbjct: 12153778 tttattcctcctcctcggcctcctccagccatttaacaaaaggttccagtgctttgacga 12153837

                          
Query: 235      aagattgcct 244
                ||||||||||
Sbjct: 12153838 aagattgcct 12153847



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 446      attnacctgccgaagtgctgaatta 470
                ||| |||||||||||||||||||||
Sbjct: 12156503 atttacctgccgaagtgctgaatta 12156527
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>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence
          Length = 158384

 Score =  113 bits (57), Expect = 5e-22
 Identities = 147/177 (83%)
 Strand = Plus / Plus

                                                                         
Query: 242   ccttcctttttggtttgaacccttgcggaaccaaagaagtatggtatcttcagcgaggac 301
             |||||||||  ||||||  || || ||||||||| |||| |||||||||||||| || ||
Sbjct: 55009 ccttcctttggggtttgttcctttacggaaccaatgaagaatggtatcttcagccagcac 55068

                                                                         
Query: 302   atcttgatcatacagagatcttataatttcagggaacagcttcatcaacttagcgtcctc 361
             ||| || ||||| |||||||| ||||| ||||||||||||||||||| |||||| |||||
Sbjct: 55069 atcctgttcataaagagatctaataatctcagggaacagcttcatcagcttagcatcctc 55128

                                                                      
Query: 362   ataacactgtgtctggaccttgtatatgagttccagttctagctttccacttgtgca 418
             ||| || ||  |||| || ||||| || || ||||| || || |||||||| |||||
Sbjct: 55129 atagcattgcatctgtactttgtacatcagctccagctcaagttttccactggtgca 55185
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>gb|AC095017.1| Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone
              BACR28H01, complete sequence
          Length = 148642

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 83     tgctcacatgtgaaaaataaaatgttat 110
              ||||||||||||||||||||| ||||||
Sbjct: 121531 tgctcacatgtgaaaaataaattgttat 121558
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>gb|AE003714.2| Drosophila melanogaster chromosome 3R, section 52 of 118 of the complete
              sequence
          Length = 231130

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 83     tgctcacatgtgaaaaataaaatgttat 110
              ||||||||||||||||||||| ||||||
Sbjct: 124500 tgctcacatgtgaaaaataaattgttat 124473
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>gb|L48177.1|L48177 Drosophila melanogaster DNA sequence (P1 DS03126 (D5)), complete
             sequence
          Length = 97852

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 83    tgctcacatgtgaaaaataaaatgttat 110
             ||||||||||||||||||||| ||||||
Sbjct: 42875 tgctcacatgtgaaaaataaattgttat 42848
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>gb|U31961.1|DMU31961 Drosophila melanogaster bithorax complex (BX-C), complete sequence
          Length = 338234

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 83     tgctcacatgtgaaaaataaaatgttat 110
              ||||||||||||||||||||| ||||||
Sbjct: 284145 tgctcacatgtgaaaaataaattgttat 284172
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>gb|AC005997.3| Homo sapiens PAC clone RP4-558L10 from 7, complete sequence
          Length = 143250

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   cagagatcttataatttcagg 334
             |||||||||||||||||||||
Sbjct: 35633 cagagatcttataatttcagg 35653
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>gb|AC142349.1| Pan troglodytes BAC clone RP43-9F6 from 7, complete sequence
          Length = 192143

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    cagagatcttataatttcagg 334
              |||||||||||||||||||||
Sbjct: 130217 cagagatcttataatttcagg 130237
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>gb|AC112219.2| Homo sapiens chromosome 3 clone RP11-433A10, complete sequence
          Length = 155472

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 244    ttcctttttggtttgaaccct 264
              |||||||||||||||||||||
Sbjct: 130081 ttcctttttggtttgaaccct 130101
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 91      tgtgaaaaataaaatgttatg 111
               |||||||||||||||||||||
Sbjct: 9608598 tgtgaaaaataaaatgttatg 9608618
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>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1059D01
          Length = 158792

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 91     tgtgaaaaataaaatgttatg 111
              |||||||||||||||||||||
Sbjct: 116328 tgtgaaaaataaaatgttatg 116348
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>dbj|AP005834.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBa0005C24
          Length = 168151

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   tgtgaaaaataaaatgttatg 111
            |||||||||||||||||||||
Sbjct: 9061 tgtgaaaaataaaatgttatg 9081
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>ref|NM_180171.2| Arabidopsis thaliana phosphogluconate dehydrogenase
           (decarboxylating) AT3G02360 transcript variant
           AT3G02360.2 mRNA, complete cds
          Length = 1929

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 aagattgccttcctttttgg 254
           ||||||||||||||||||||
Sbjct: 441 aagattgccttcctttttgg 422
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>ref|NM_111103.4| Arabidopsis thaliana phosphogluconate dehydrogenase
           (decarboxylating) AT3G02360 transcript variant
           AT3G02360.1 mRNA, complete cds
          Length = 1774

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 aagattgccttcctttttgg 254
           ||||||||||||||||||||
Sbjct: 286 aagattgccttcctttttgg 267
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>gb|AC102166.13| Mus musculus chromosome 1, clone RP23-447B15, complete sequence
          Length = 182043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    tgtgaaaaataaaatgttat 110
             ||||||||||||||||||||
Sbjct: 64328 tgtgaaaaataaaatgttat 64347
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>ref|XM_461779.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G06017g)
           partial mRNA
          Length = 747

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 392 ttccagttctagctttccacttgt 415
           ||||||||||||||||| ||||||
Sbjct: 730 ttccagttctagctttcgacttgt 707
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>gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence
          Length = 320187

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     tgaaaaataaaatgttatgt 112
              ||||||||||||||||||||
Sbjct: 153994 tgaaaaataaaatgttatgt 154013
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>gb|AC123034.5| Mus musculus BAC clone RP24-484E17 from chromosome 13, complete sequence
          Length = 177675

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    aaggaaatactcattttaaa 158
              ||||||||||||||||||||
Sbjct: 147871 aaggaaatactcattttaaa 147852
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>emb|AL513023.12| Human DNA sequence from clone RP11-256A6 on chromosome 6, complete
             sequence
          Length = 165699

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    gtgaaaaataaaatgttatg 111
             ||||||||||||||||||||
Sbjct: 34218 gtgaaaaataaaatgttatg 34199
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>gb|AC090099.14| Homo sapiens chromosome 11, clone RP11-113D6, complete sequence
          Length = 172939

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     atgtgaaaaataaaatgtta 109
              ||||||||||||||||||||
Sbjct: 107252 atgtgaaaaataaaatgtta 107271
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>emb|AL022165.1|HS71L16 Human DNA sequence from clone RP1-71L16 on chromosome Xp11 Contains a
              pseudogene similar to part of novel gene (FLJ20344), a
              novel gene, the CHST7 gene for carbohydrate
              (N-acetylglucosamine 6-O) ulfotransferase 7 (C6ST-2), the
              3' end of the SLC9A7 gene for solute carrier family 9
              (sodium/hydrogen exchanger), isoform 7 (NHE7), a pseudogene
              similar to part of germ cell specific Y-box binding protein
              (YBX2) and two CpG islands, complete sequence
          Length = 176433

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 419    aaatgcattcataagaccagccca 442
              |||||||||| |||||||||||||
Sbjct: 112132 aaatgcattcctaagaccagccca 112109
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>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
              hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 392    ttccagttctagctttccacttgt 415
              ||||||||||||||||| ||||||
Sbjct: 463910 ttccagttctagctttcgacttgt 463933
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>gb|AC108007.5| Homo sapiens chromosome 11, clone CTD-3038L12, complete sequence
          Length = 91923

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   atgtgaaaaataaaatgtta 109
            ||||||||||||||||||||
Sbjct: 2784 atgtgaaaaataaaatgtta 2803
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>gb|AC152395.9| Mus musculus chromosome 15, clone RP23-391D2, complete sequence
          Length = 210006

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   tgtgcaaaatgcattcataa 432
             ||||||||||||||||||||
Sbjct: 59116 tgtgcaaaatgcattcataa 59097
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>gb|AC023711.5| Drosophila melanogaster X BAC RP98-6C4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174157

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   ttgacgaaaggctccagagc 226
             ||||||||||||||||||||
Sbjct: 25510 ttgacgaaaggctccagagc 25491
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>gb|AC104511.5| Drosophila melanogaster X BAC RP98-39D14 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 166000

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   ttgacgaaaggctccagagc 226
             ||||||||||||||||||||
Sbjct: 12953 ttgacgaaaggctccagagc 12972
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>gb|AC023685.4| Drosophila melanogaster 3L BAC RP98-20N12 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 167926

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   ttgacgaaaggctccagagc 226
             ||||||||||||||||||||
Sbjct: 54923 ttgacgaaaggctccagagc 54904
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>gb|AC022889.8| Homo sapiens chromosome 15, clone RP11-492D5, complete sequence
          Length = 108652

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    gacagcaatgctcacatgtgaaaa 98
             ||||||||||||||||| ||||||
Sbjct: 55157 gacagcaatgctcacatttgaaaa 55180
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>gb|AC104420.2| Homo sapiens chromosome 15, clone RP11-945A13, complete sequence
          Length = 178756

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 75     gacagcaatgctcacatgtgaaaa 98
              ||||||||||||||||| ||||||
Sbjct: 157863 gacagcaatgctcacatttgaaaa 157886
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>gb|AC073917.19| Homo sapiens 12q BAC RP11-415D21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163836

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     atgtgaaaaataaaatgtta 109
              ||||||||||||||||||||
Sbjct: 107611 atgtgaaaaataaaatgtta 107592
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>gb|AC068397.6| Homo sapiens chromosome 15, clone RP11-272D12, complete sequence
          Length = 169892

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    gacagcaatgctcacatgtgaaaa 98
             ||||||||||||||||| ||||||
Sbjct: 36101 gacagcaatgctcacatttgaaaa 36124
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>gb|AF424591.1|AF424591 Arabidopsis thaliana AT3g02360/F11A12_104 mRNA, complete cds
          Length = 1681

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 aagattgccttcctttttgg 254
           ||||||||||||||||||||
Sbjct: 264 aagattgccttcctttttgg 245
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>gb|AC073532.18|AC073532 Homo sapiens 12 BAC RP11-150F20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 143759

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    atgtgaaaaataaaatgtta 109
             ||||||||||||||||||||
Sbjct: 90615 atgtgaaaaataaaatgtta 90596
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>gb|AC068900.3|AC068900 Arabidopsis thaliana chromosome 3 BAC F11A12 genomic sequence, complete
             sequence
          Length = 22087

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   aagattgccttcctttttgg 254
             ||||||||||||||||||||
Sbjct: 13190 aagattgccttcctttttgg 13171
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>gb|AY087341.1| Arabidopsis thaliana clone 34412 mRNA, complete sequence
          Length = 1753

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 aagattgccttcctttttgg 254
           ||||||||||||||||||||
Sbjct: 268 aagattgccttcctttttgg 249
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>gb|BT002299.1| Arabidopsis thaliana At3g02360/F11A12_104 mRNA, complete cds
          Length = 1461

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 aagattgccttcctttttgg 254
           ||||||||||||||||||||
Sbjct: 162 aagattgccttcctttttgg 143
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>gb|AC004003.1|AC004003 Homo sapiens BAC clone CTA-437L15 from 8q21, complete sequence
          Length = 116650

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    tgaaaaataaaatgttatgt 112
             ||||||||||||||||||||
Sbjct: 14464 tgaaaaataaaatgttatgt 14483
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>emb|BX255939.3| Zebrafish DNA sequence from clone DKEY-5G7 in linkage group 20,
             complete sequence
          Length = 168897

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tgctcacatgtgaaaaataa 102
             ||||||||||||||||||||
Sbjct: 22073 tgctcacatgtgaaaaataa 22054
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>gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 of 74 of the complete
              sequence
          Length = 332030

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    ttgacgaaaggctccagagc 226
              ||||||||||||||||||||
Sbjct: 111609 ttgacgaaaggctccagagc 111590
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>gb|AC133188.4| Mus musculus BAC clone RP23-330F6 from 13, complete sequence
          Length = 201730

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   aaggaaatactcattttaaa 158
             ||||||||||||||||||||
Sbjct: 25902 aaggaaatactcattttaaa 25883
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>gb|AC158950.3| Mus musculus chromosome 1, clone RP24-215K13, complete sequence
          Length = 208060

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    tgtgaaaaataaaatgttat 110
             ||||||||||||||||||||
Sbjct: 89307 tgtgaaaaataaaatgttat 89288


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,969,495
Number of Sequences: 3902068
Number of extensions: 4969495
Number of successful extensions: 97837
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97627
Number of HSP's gapped (non-prelim): 210
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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